BLASTX nr result
ID: Atropa21_contig00013069
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atropa21_contig00013069 (1375 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006363666.1| PREDICTED: 29 kDa ribonucleoprotein B, chlor... 405 e-110 ref|XP_006363665.1| PREDICTED: 29 kDa ribonucleoprotein B, chlor... 402 e-109 sp|Q08937.1|ROC2_NICSY RecName: Full=29 kDa ribonucleoprotein B,... 373 e-100 sp|P49314.1|ROC2_NICPL RecName: Full=31 kDa ribonucleoprotein, c... 369 2e-99 sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A,... 341 5e-91 sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, c... 333 1e-88 ref|NP_001275094.1| single-stranded DNA binding protein precurso... 318 4e-84 ref|XP_004246655.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor... 314 6e-83 ref|XP_004304439.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor... 303 1e-79 ref|XP_006428771.1| hypothetical protein CICLE_v10012331mg [Citr... 298 4e-78 ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 296 1e-77 ref|XP_006294745.1| hypothetical protein CARUB_v10023790mg [Caps... 296 1e-77 gb|EXC16209.1| 29 kDa ribonucleoprotein B [Morus notabilis] 293 2e-76 ref|XP_002881497.1| hypothetical protein ARALYDRAFT_482714 [Arab... 292 2e-76 gb|AAM66970.1| putative RNA-binding protein [Arabidopsis thaliana] 292 2e-76 ref|NP_181259.1| chloroplast RNA binding protein [Arabidopsis th... 291 6e-76 ref|XP_006410902.1| hypothetical protein EUTSA_v10017023mg [Eutr... 290 1e-75 gb|EMJ06843.1| hypothetical protein PRUPE_ppa009295mg [Prunus pe... 289 2e-75 ref|XP_002323470.1| 29 kDa ribonucleoprotein [Populus trichocarp... 288 3e-75 ref|XP_002519525.1| ribonucleoprotein, chloroplast, putative [Ri... 287 8e-75 >ref|XP_006363666.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic-like isoform X2 [Solanum tuberosum] Length = 291 Score = 405 bits (1042), Expect = e-110 Identities = 224/292 (76%), Positives = 234/292 (80%), Gaps = 10/292 (3%) Frame = -3 Query: 1316 MASSVSSLQFLFVTPQTFSSLKPNXXXXXXXXXSLPTKNXXXXXXXXXXXS-IKPF---- 1152 MASSVSSLQFLFVTPQT SSLKPN SLP+ + S IKPF Sbjct: 1 MASSVSSLQFLFVTPQTLSSLKPNSAPTSFSFFSLPSSSLNLSLSSSTPSSSIKPFESSS 60 Query: 1151 -----VRNVALSEFDQLEDDVEEVGEQPNLSPDLKLFVGNLPFSVDSAALAGLFERAGNV 987 VRNVALSEFDQLEDDV EV E+PN SPDLKLFVGNLPFSVDSAALA LFERAGNV Sbjct: 61 FGSRFVRNVALSEFDQLEDDVGEVEEEPNFSPDLKLFVGNLPFSVDSAALAELFERAGNV 120 Query: 986 EMVEVIYDKLTGRSRGFGFVTMSTKAEVEAAEQQFNGYEIDGRALRVNCGPPPEKRENSF 807 EMVEVIYDKLTGRSRGFGFVTMS+KAEVEAAEQQFNGYEIDGRALRVN GP PEKRENSF Sbjct: 121 EMVEVIYDKLTGRSRGFGFVTMSSKAEVEAAEQQFNGYEIDGRALRVNSGPAPEKRENSF 180 Query: 806 GGARDGRSENXXXXXXXXXXXXXXXSNRVYVGNLSWGVDDLALKELFSEQGQVVDAKVVY 627 GG R GRSEN SNRVYVGNLSWGVDDL+L+ELFS+QG+VVD KVVY Sbjct: 181 GGGRGGRSEN-SSYGGARGGRNFDSSNRVYVGNLSWGVDDLSLRELFSDQGKVVDCKVVY 239 Query: 626 DRDSGRSRGFGFVTYSSAKEVNNAIDSLNGVDLDGRSIRVSAAEERPPRRQF 471 DRDSGRSRGFGFVT+SSA+EVN AIDSLNG DLDGRSIRVSAAEERPPRRQF Sbjct: 240 DRDSGRSRGFGFVTFSSAQEVNKAIDSLNGFDLDGRSIRVSAAEERPPRRQF 291 >ref|XP_006363665.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic-like isoform X1 [Solanum tuberosum] Length = 301 Score = 402 bits (1033), Expect = e-109 Identities = 224/301 (74%), Positives = 234/301 (77%), Gaps = 19/301 (6%) Frame = -3 Query: 1316 MASSVSSLQFLFVTPQTFSSLKPNXXXXXXXXXSLPTKNXXXXXXXXXXXS-IKPF---- 1152 MASSVSSLQFLFVTPQT SSLKPN SLP+ + S IKPF Sbjct: 1 MASSVSSLQFLFVTPQTLSSLKPNSAPTSFSFFSLPSSSLNLSLSSSTPSSSIKPFESSS 60 Query: 1151 -----VRNVALSEFDQLEDDVEEVGEQPNLSPDLKLFVGNLPFSVDSAALAGLFERAGNV 987 VRNVALSEFDQLEDDV EV E+PN SPDLKLFVGNLPFSVDSAALA LFERAGNV Sbjct: 61 FGSRFVRNVALSEFDQLEDDVGEVEEEPNFSPDLKLFVGNLPFSVDSAALAELFERAGNV 120 Query: 986 EMVEVIYDKLTGRSRGFGFVTMSTKAEVEAAEQQFNGYEIDGRALRVNCGPPPEKRENSF 807 EMVEVIYDKLTGRSRGFGFVTMS+KAEVEAAEQQFNGYEIDGRALRVN GP PEKRENSF Sbjct: 121 EMVEVIYDKLTGRSRGFGFVTMSSKAEVEAAEQQFNGYEIDGRALRVNSGPAPEKRENSF 180 Query: 806 GGARDGRSEN---------XXXXXXXXXXXXXXXSNRVYVGNLSWGVDDLALKELFSEQG 654 GG R GRSEN SNRVYVGNLSWGVDDL+L+ELFS+QG Sbjct: 181 GGGRGGRSENSSYGGGRSENSSYGGARGGRNFDSSNRVYVGNLSWGVDDLSLRELFSDQG 240 Query: 653 QVVDAKVVYDRDSGRSRGFGFVTYSSAKEVNNAIDSLNGVDLDGRSIRVSAAEERPPRRQ 474 +VVD KVVYDRDSGRSRGFGFVT+SSA+EVN AIDSLNG DLDGRSIRVSAAEERPPRRQ Sbjct: 241 KVVDCKVVYDRDSGRSRGFGFVTFSSAQEVNKAIDSLNGFDLDGRSIRVSAAEERPPRRQ 300 Query: 473 F 471 F Sbjct: 301 F 301 >sp|Q08937.1|ROC2_NICSY RecName: Full=29 kDa ribonucleoprotein B, chloroplastic; AltName: Full=CP29B; Flags: Precursor gi|14135|emb|CAA43428.1| 29kD B ribonucleoprotein [Nicotiana sylvestris] Length = 291 Score = 373 bits (957), Expect = e-100 Identities = 218/294 (74%), Positives = 225/294 (76%), Gaps = 13/294 (4%) Frame = -3 Query: 1313 ASSVSSLQFLFVTPQTFSSLKPNXXXXXXXXXSLPTK--NXXXXXXXXXXXSIKPFVRN- 1143 +SSVSSLQFLFVTPQT SSLKPN LP+ N SIKPF + Sbjct: 3 SSSVSSLQFLFVTPQTPSSLKPNSTLSFFS---LPSSSLNLSLSSSSTGLCSIKPFESSF 59 Query: 1142 ---VALSEFDQLEDDVEEVGEQPNLSPDLKLFVGNLPFSVDSAALAGLFERAGNVEMVEV 972 VALS FDQLEDDVE V EQP S DLKLFVGNLPFSVDSAALAGLFERAGNVEMVEV Sbjct: 60 STRVALSGFDQLEDDVE-VAEQPRFSEDLKLFVGNLPFSVDSAALAGLFERAGNVEMVEV 118 Query: 971 IYDKLTGRSRGFGFVTMSTKAEVEAAEQQFNGYEIDGRALRVNCGPPPEKREN-SFGGAR 795 IYDKLTGRSRGFGFVTMSTK EVEAAEQQFNGYEIDGRA+RVN GP P KREN SFGG R Sbjct: 119 IYDKLTGRSRGFGFVTMSTKEEVEAAEQQFNGYEIDGRAIRVNAGPAPAKRENSSFGGGR 178 Query: 794 DGRS------ENXXXXXXXXXXXXXXXSNRVYVGNLSWGVDDLALKELFSEQGQVVDAKV 633 G S + SNRVYVGNLSWGVDDLALKELFSEQG VVDAKV Sbjct: 179 GGNSSYGGGRDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKV 238 Query: 632 VYDRDSGRSRGFGFVTYSSAKEVNNAIDSLNGVDLDGRSIRVSAAEERPPRRQF 471 VYDRDSGRSRGFGFVTYSS+KEVN+AIDSLNGVDLDGRSIRVSAAEER PRRQF Sbjct: 239 VYDRDSGRSRGFGFVTYSSSKEVNDAIDSLNGVDLDGRSIRVSAAEER-PRRQF 291 >sp|P49314.1|ROC2_NICPL RecName: Full=31 kDa ribonucleoprotein, chloroplastic; AltName: Full=CP-RBP31; Flags: Precursor gi|19710|emb|CAA46233.1| RNA binding protein 31 [Nicotiana plumbaginifolia] Length = 292 Score = 369 bits (946), Expect = 2e-99 Identities = 213/292 (72%), Positives = 222/292 (76%), Gaps = 11/292 (3%) Frame = -3 Query: 1313 ASSVSSLQFLFVTPQTFSSLKPNXXXXXXXXXSLPTKNXXXXXXXXXXXSIKPFVRN--- 1143 +SSVSSLQFLFVT QT SSLKPN S SIKPF + Sbjct: 3 SSSVSSLQFLFVTSQTPSSLKPNSTLSFFSLPSSSLNLSLSSSSIGHSASIKPFESSFST 62 Query: 1142 -VALSEFDQLEDDVEEVGEQPNLSPDLKLFVGNLPFSVDSAALAGLFERAGNVEMVEVIY 966 VALS+FDQLEDDVE V EQP S DLKLFVGNLPFSVDSAALAGLFERAGNVE+VEVIY Sbjct: 63 RVALSDFDQLEDDVE-VAEQPRFSEDLKLFVGNLPFSVDSAALAGLFERAGNVEIVEVIY 121 Query: 965 DKLTGRSRGFGFVTMSTKAEVEAAEQQFNGYEIDGRALRVNCGPPPEKREN-SFGGARDG 789 DKL+GRSRGFGFVTMSTK EVEAAEQQFNGYEIDGRA+RVN GP P KREN SFGG R G Sbjct: 122 DKLSGRSRGFGFVTMSTKEEVEAAEQQFNGYEIDGRAIRVNAGPAPAKRENSSFGGGRGG 181 Query: 788 RS------ENXXXXXXXXXXXXXXXSNRVYVGNLSWGVDDLALKELFSEQGQVVDAKVVY 627 S + SNRVYVGNLSWGVDDLALKELFSEQG VVDAKVVY Sbjct: 182 NSSYGGGRDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVY 241 Query: 626 DRDSGRSRGFGFVTYSSAKEVNNAIDSLNGVDLDGRSIRVSAAEERPPRRQF 471 DRDSGRSRGFGFVTYSSAKEVN+AIDSLNG+DLDGRSIRVSAAEER PRRQF Sbjct: 242 DRDSGRSRGFGFVTYSSAKEVNDAIDSLNGIDLDGRSIRVSAAEER-PRRQF 292 >sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A, chloroplastic; AltName: Full=CP29A; Flags: Precursor gi|19754|emb|CAA43427.1| 29kD A ribonucleoprotein [Nicotiana sylvestris] Length = 273 Score = 341 bits (874), Expect = 5e-91 Identities = 194/288 (67%), Positives = 212/288 (73%), Gaps = 6/288 (2%) Frame = -3 Query: 1316 MASSVSSLQFLFVTPQTFSSLKPNXXXXXXXXXSLPTKNXXXXXXXXXXXSIKPFVRNVA 1137 MASS SSL FL +TPQT KP SLP + FVR V Sbjct: 1 MASSASSLHFLSLTPQTLPLPKPTSQTTSLSFFSLPPSSLNLSLSSSSSCFSSRFVRKVT 60 Query: 1136 LSEFDQLEDDVEE----VGEQPNLSPDLKLFVGNLPFSVDSAALAGLFERAGNVEMVEVI 969 LS+FDQ+ED VE+ V E+ N SPDLK+FVGNLPFS DSAALA LFERAGNVEMVEVI Sbjct: 61 LSDFDQIED-VEDGDDGVEEERNFSPDLKIFVGNLPFSADSAALAELFERAGNVEMVEVI 119 Query: 968 YDKLTGRSRGFGFVTMSTKAEVEAAEQQFNGYEIDGRALRVNCGPPPEKRENSF--GGAR 795 YDKLTGRSRGFGFVTMS+K EVEAA QQFNGYE+DGRALRVN GPPPEKRENS GG+R Sbjct: 120 YDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNSGPPPEKRENSSFRGGSR 179 Query: 794 DGRSENXXXXXXXXXXXXXXXSNRVYVGNLSWGVDDLALKELFSEQGQVVDAKVVYDRDS 615 G S SNRVYVGNL+WGVD AL+ LFSEQG+VVDAKVVYDRDS Sbjct: 180 GGGS--------------FDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDS 225 Query: 614 GRSRGFGFVTYSSAKEVNNAIDSLNGVDLDGRSIRVSAAEERPPRRQF 471 GRSRGFGFVTYSSA+EVNNAI+SL+GVDL+GR+IRVS AE RPPRRQF Sbjct: 226 GRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPAEARPPRRQF 273 >sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, chloroplastic; AltName: Full=CP-RBP30; Flags: Precursor gi|19708|emb|CAA46234.1| RNA binding protein 30 [Nicotiana plumbaginifolia] Length = 279 Score = 333 bits (853), Expect = 1e-88 Identities = 191/293 (65%), Positives = 208/293 (70%), Gaps = 11/293 (3%) Frame = -3 Query: 1316 MASSVSSLQFLFVTPQTFSSLKPNXXXXXXXXXSLPTKNXXXXXXXXXXXSIKPFVRNVA 1137 MASS SSL FL +TPQT KP SLP + FVR V Sbjct: 1 MASSASSLHFLSLTPQTLLLPKPTSQTTSLSFFSLPPSSLNLSLSSPSSCFSSRFVRKVT 60 Query: 1136 LSEFDQLED---DVEEVGEQPNLSPDLKLFVGNLPFSVDSAALAGLFERAGNVEMVEVIY 966 L +FDQ+ED E V E+ N SPDLK+FVGNL FS DSAALA LFERAGNVEMVEVIY Sbjct: 61 LPDFDQIEDVEDGDEGVEEERNFSPDLKIFVGNLLFSADSAALAELFERAGNVEMVEVIY 120 Query: 965 DKLTGRSRGFGFVTMSTKAEVEAAEQQFNGYEIDGRALRVNCGPPPEKRENSF------- 807 DKLTGRSRGFGFVTMS+K EVEAA QQFNGYE+DGRALRVN GPPPEKRENS Sbjct: 121 DKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNSGPPPEKRENSSFRENSSF 180 Query: 806 -GGARDGRSENXXXXXXXXXXXXXXXSNRVYVGNLSWGVDDLALKELFSEQGQVVDAKVV 630 GG+R G S SNRVYVGNL+WGVD AL+ LFSEQG+VVDAKVV Sbjct: 181 RGGSRGGGS--------------FDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVV 226 Query: 629 YDRDSGRSRGFGFVTYSSAKEVNNAIDSLNGVDLDGRSIRVSAAEERPPRRQF 471 YDRDSGRSRGFGFVTYSSA+EVNNAI+SL+GVDL+GR+IRVS AE RPPRRQF Sbjct: 227 YDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPAEARPPRRQF 279 >ref|NP_001275094.1| single-stranded DNA binding protein precursor [Solanum tuberosum] gi|17432522|gb|AAL39067.1|AF389431_1 single-stranded DNA binding protein precursor [Solanum tuberosum] Length = 289 Score = 318 bits (814), Expect = 4e-84 Identities = 191/305 (62%), Positives = 208/305 (68%), Gaps = 23/305 (7%) Frame = -3 Query: 1316 MASSVSSLQFLFVTPQTFSSLKPNXXXXXXXXXSLPTKNXXXXXXXXXXXS---IKPFVR 1146 MASS SSL FL +TPQT KP SLP + FVR Sbjct: 1 MASSSSSLHFLSLTPQTLP--KPTSQTTSISFFSLPPSSLNLSLSSSSTPRNFESSRFVR 58 Query: 1145 NVALSEFDQLE------DDVEEVG--------EQPNLSPDLKLFVGNLPFSVDSAALAGL 1008 V LS+FDQ+E DD EE G E+ N +PDLK+FVGNLPFSVDSAALA L Sbjct: 59 KVTLSDFDQIEEVEAGDDDEEEGGLSDEGASYEERNANPDLKIFVGNLPFSVDSAALAEL 118 Query: 1007 FERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKAEVEAAEQQFNGYEIDGRALRVNCGPPP 828 FERAG+VEMVEVIYDKLTGRSRGFGFVTMS+K VEAA QQFNGYEIDGRALRVN GP P Sbjct: 119 FERAGDVEMVEVIYDKLTGRSRGFGFVTMSSKEAVEAACQQFNGYEIDGRALRVNSGPAP 178 Query: 827 EKRENSFG------GARDGRSENXXXXXXXXXXXXXXXSNRVYVGNLSWGVDDLALKELF 666 KRENSFG G R G S + SNRVYVGNL+W VD L+ LF Sbjct: 179 PKRENSFGDNSSYQGGRGGGSMD--------------SSNRVYVGNLAWSVDQQQLETLF 224 Query: 665 SEQGQVVDAKVVYDRDSGRSRGFGFVTYSSAKEVNNAIDSLNGVDLDGRSIRVSAAEERP 486 SEQG+VVDAKVVYDRDSGRSRGFGFVTYSSAKEVN+AI+SL+GVDL GR+IRVS AE RP Sbjct: 225 SEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAKEVNDAIESLDGVDLGGRAIRVSPAEARP 284 Query: 485 PRRQF 471 PRRQF Sbjct: 285 PRRQF 289 >ref|XP_004246655.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic-like [Solanum lycopersicum] Length = 290 Score = 314 bits (804), Expect = 6e-83 Identities = 188/306 (61%), Positives = 208/306 (67%), Gaps = 24/306 (7%) Frame = -3 Query: 1316 MASSVSSLQFLFVTPQTFSSLKPNXXXXXXXXXSLPTKNXXXXXXXXXXXSI---KPFVR 1146 MASS SSL FL +TPQT KP SLP+ + FVR Sbjct: 1 MASSSSSLHFLSLTPQTLP--KPTSQTTSISFFSLPSSSLNLSLSSSSTPRYFESSRFVR 58 Query: 1145 NVALSEFDQLE------DDVEEVG---------EQPNLSPDLKLFVGNLPFSVDSAALAG 1011 V LS+FDQ+E DD EE G ++ N +PDLK+FVGNLPFSVDSA LA Sbjct: 59 KVTLSDFDQIEEVGAGDDDEEEEGGLSDEGASYQERNANPDLKIFVGNLPFSVDSAYLAE 118 Query: 1010 LFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKAEVEAAEQQFNGYEIDGRALRVNCGPP 831 LFERAG+VEMVEVIYDKLTGRSRGFGFVTMS+K VEAA QQFNGYEIDGRALRVN GP Sbjct: 119 LFERAGDVEMVEVIYDKLTGRSRGFGFVTMSSKEAVEAACQQFNGYEIDGRALRVNSGPA 178 Query: 830 PEKRENSFG------GARDGRSENXXXXXXXXXXXXXXXSNRVYVGNLSWGVDDLALKEL 669 P KRENSFG G R G S + SNRVYVGNL+W VD L+ L Sbjct: 179 PPKRENSFGGNSSYQGGRGGGSMD--------------SSNRVYVGNLAWSVDQQQLETL 224 Query: 668 FSEQGQVVDAKVVYDRDSGRSRGFGFVTYSSAKEVNNAIDSLNGVDLDGRSIRVSAAEER 489 FSEQG+VVDAKVVYDRDSGRSRGFGFVTYSSA+EVN+AI+SL+GVDL GR+IRVS AE R Sbjct: 225 FSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAQEVNDAIESLDGVDLGGRAIRVSPAEAR 284 Query: 488 PPRRQF 471 PPRRQF Sbjct: 285 PPRRQF 290 >ref|XP_004304439.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic-like [Fragaria vesca subsp. vesca] Length = 277 Score = 303 bits (776), Expect = 1e-79 Identities = 157/230 (68%), Positives = 186/230 (80%) Frame = -3 Query: 1160 KPFVRNVALSEFDQLEDDVEEVGEQPNLSPDLKLFVGNLPFSVDSAALAGLFERAGNVEM 981 + FVR+VA+S+F+Q E+ + +PN SPDLKLFVGNLPF+VDSA LA LFE AGNVEM Sbjct: 56 RSFVRHVAVSDFEQDEEVLSGDEAEPNFSPDLKLFVGNLPFTVDSAQLAELFEGAGNVEM 115 Query: 980 VEVIYDKLTGRSRGFGFVTMSTKAEVEAAEQQFNGYEIDGRALRVNCGPPPEKRENSFGG 801 VEVIYDK TGRSRGFGFVTMS+ EVEAA +QFNGYE+DGRALRVN GPPP + E+SF G Sbjct: 116 VEVIYDKTTGRSRGFGFVTMSSAQEVEAAARQFNGYELDGRALRVNYGPPPPRTEDSFRG 175 Query: 800 ARDGRSENXXXXXXXXXXXXXXXSNRVYVGNLSWGVDDLALKELFSEQGQVVDAKVVYDR 621 AR G SNR+YVGNL+WGVD+LAL+ LF+EQG+V++AKVV+DR Sbjct: 176 ARGGSPRG--------GGGYGDSSNRLYVGNLAWGVDNLALENLFNEQGKVLEAKVVFDR 227 Query: 620 DSGRSRGFGFVTYSSAKEVNNAIDSLNGVDLDGRSIRVSAAEERPPRRQF 471 DSGRSRGFGFVTY SA+E+N+AI+SL+GVDL GRSIRV+AAE RPPRRQF Sbjct: 228 DSGRSRGFGFVTYGSAEEMNSAIESLDGVDLGGRSIRVTAAEPRPPRRQF 277 >ref|XP_006428771.1| hypothetical protein CICLE_v10012331mg [Citrus clementina] gi|568855826|ref|XP_006481497.1| PREDICTED: ribonucleoprotein At2g37220, chloroplastic-like [Citrus sinensis] gi|557530828|gb|ESR42011.1| hypothetical protein CICLE_v10012331mg [Citrus clementina] Length = 282 Score = 298 bits (763), Expect = 4e-78 Identities = 164/230 (71%), Positives = 182/230 (79%), Gaps = 2/230 (0%) Frame = -3 Query: 1154 FVRNVALS-EFDQLEDDVEEVGEQPNLSPDLKLFVGNLPFSVDSAALAGLFERAGNVEMV 978 FVRNVA+S EFDQ E+D+ + N SPDLKLFVGNLPFSVDSA LAGLFE AGNVEMV Sbjct: 65 FVRNVAVSSEFDQ-EEDLLSDEDGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMV 123 Query: 977 EVIYDKLTGRSRGFGFVTMSTKAEVEAAEQQFNGYEIDGRALRVNCGPPPEKREN-SFGG 801 EVIYDK+TGRSRGFGFVTMS+ EVEAA QQFNGYE++GR LRVN GPPP +RE S G Sbjct: 124 EVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNSGPPPPRREEFSPRG 183 Query: 800 ARDGRSENXXXXXXXXXXXXXXXSNRVYVGNLSWGVDDLALKELFSEQGQVVDAKVVYDR 621 R G + NRVYVGNLSWGVDDLAL+ LF EQG+V++AKVVYDR Sbjct: 184 PRGGGA-----------GAPSSGGNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDR 232 Query: 620 DSGRSRGFGFVTYSSAKEVNNAIDSLNGVDLDGRSIRVSAAEERPPRRQF 471 +SGRSRGFGFVTYSSA+EV+NAIDSLNGVDL GR+IRVS AE RP RRQF Sbjct: 233 ESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEARPQRRQF 282 >ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic isoform 1 [Vitis vinifera] Length = 288 Score = 296 bits (759), Expect = 1e-77 Identities = 157/230 (68%), Positives = 185/230 (80%), Gaps = 2/230 (0%) Frame = -3 Query: 1154 FVRNVALS-EFDQLEDDVEEVGEQPNLSPDLKLFVGNLPFSVDSAALAGLFERAGNVEMV 978 FVRNVA+S +++Q ED + + GE P+ SPDLKLFVGNLPF+VDSA LAGLFE+AGNVEMV Sbjct: 61 FVRNVAVSSDYEQDEDVLSDEGE-PSFSPDLKLFVGNLPFNVDSAGLAGLFEQAGNVEMV 119 Query: 977 EVIYDKLTGRSRGFGFVTMSTKAEVEAAEQQFNGYEIDGRALRVNCGPPPEKRENS-FGG 801 EVIYDK+TGRSRGFGFVTMST EVEAA QQFNGYE++GR LRVN GPPP +RENS F G Sbjct: 120 EVIYDKITGRSRGFGFVTMSTVEEVEAAAQQFNGYELEGRQLRVNSGPPPARRENSNFRG 179 Query: 800 ARDGRSENXXXXXXXXXXXXXXXSNRVYVGNLSWGVDDLALKELFSEQGQVVDAKVVYDR 621 +NR+YVGNLSWGVDDLAL+ LFSEQG+V +A+V+YDR Sbjct: 180 ENSNFRGENTNFRGPRGGANLNSTNRIYVGNLSWGVDDLALETLFSEQGKVTEARVIYDR 239 Query: 620 DSGRSRGFGFVTYSSAKEVNNAIDSLNGVDLDGRSIRVSAAEERPPRRQF 471 ++GRSRGFGFVTY+SA+EVN AI+SL+GVDL+GRSIRV+ AE R PRRQF Sbjct: 240 ETGRSRGFGFVTYNSAEEVNRAIESLDGVDLNGRSIRVTMAEAR-PRRQF 288 >ref|XP_006294745.1| hypothetical protein CARUB_v10023790mg [Capsella rubella] gi|482563453|gb|EOA27643.1| hypothetical protein CARUB_v10023790mg [Capsella rubella] Length = 284 Score = 296 bits (758), Expect = 1e-77 Identities = 156/230 (67%), Positives = 180/230 (78%), Gaps = 2/230 (0%) Frame = -3 Query: 1154 FVRNVALSEFDQLEDDVEE--VGEQPNLSPDLKLFVGNLPFSVDSAALAGLFERAGNVEM 981 FVRNVA SEF+ ED + ++ + S DLKLFVGNLPF+VDSA LA LFE AGNVEM Sbjct: 59 FVRNVATSEFEVEEDGFSDDAAPQEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEM 118 Query: 980 VEVIYDKLTGRSRGFGFVTMSTKAEVEAAEQQFNGYEIDGRALRVNCGPPPEKRENSFGG 801 VEVIYDK+TGRSRGFGFVTMS+ +EVEAA QQFNGYE+DGR LRVN GPPP KRE+ F Sbjct: 119 VEVIYDKVTGRSRGFGFVTMSSASEVEAAAQQFNGYELDGRPLRVNAGPPPPKREDGF-- 176 Query: 800 ARDGRSENXXXXXXXXXXXXXXXSNRVYVGNLSWGVDDLALKELFSEQGQVVDAKVVYDR 621 +R RS NRVYVGNLSWGVDD+AL+ LF+EQG+VV+A+V+YDR Sbjct: 177 SRGPRSS--FGGSGYGGGSGAGSGNRVYVGNLSWGVDDMALESLFAEQGKVVEARVIYDR 234 Query: 620 DSGRSRGFGFVTYSSAKEVNNAIDSLNGVDLDGRSIRVSAAEERPPRRQF 471 DSGRS+GFGFVTY+S++EV NAI+SLNG DLDGR IRVS AE RPPRRQF Sbjct: 235 DSGRSKGFGFVTYNSSQEVQNAINSLNGADLDGRQIRVSEAEARPPRRQF 284 >gb|EXC16209.1| 29 kDa ribonucleoprotein B [Morus notabilis] Length = 296 Score = 293 bits (749), Expect = 2e-76 Identities = 157/229 (68%), Positives = 179/229 (78%), Gaps = 1/229 (0%) Frame = -3 Query: 1154 FVRNVALS-EFDQLEDDVEEVGEQPNLSPDLKLFVGNLPFSVDSAALAGLFERAGNVEMV 978 FV VA+S EFDQ ED + + GE+P SPDLKLFVGNLPFSVDSA LAGLFER GNVEMV Sbjct: 72 FVPKVAVSSEFDQDEDVLSDGGEEPGFSPDLKLFVGNLPFSVDSAQLAGLFERTGNVEMV 131 Query: 977 EVIYDKLTGRSRGFGFVTMSTKAEVEAAEQQFNGYEIDGRALRVNCGPPPEKRENSFGGA 798 EVIYDK TGRSRGFGFVTMS+ EVEAA QQFNGYE++GR LRVN GPPP + ++SF Sbjct: 132 EVIYDKTTGRSRGFGFVTMSSIDEVEAAAQQFNGYELEGRPLRVNYGPPPSREDDSFPRG 191 Query: 797 RDGRSENXXXXXXXXXXXXXXXSNRVYVGNLSWGVDDLALKELFSEQGQVVDAKVVYDRD 618 R G NRVYVGNLSWGVD+ AL+ LFSEQG+V++AKVVYDRD Sbjct: 192 RRG---GGGGGGGGGGGAGYETGNRVYVGNLSWGVDNAALESLFSEQGKVLEAKVVYDRD 248 Query: 617 SGRSRGFGFVTYSSAKEVNNAIDSLNGVDLDGRSIRVSAAEERPPRRQF 471 SGRSRGFGFVTY++A EVN+AI+SLNGVDL+GRSIRV+ AE + PRR F Sbjct: 249 SGRSRGFGFVTYNTADEVNSAINSLNGVDLNGRSIRVTHAEAK-PRRSF 296 >ref|XP_002881497.1| hypothetical protein ARALYDRAFT_482714 [Arabidopsis lyrata subsp. lyrata] gi|297327336|gb|EFH57756.1| hypothetical protein ARALYDRAFT_482714 [Arabidopsis lyrata subsp. lyrata] Length = 289 Score = 292 bits (748), Expect = 2e-76 Identities = 153/231 (66%), Positives = 177/231 (76%), Gaps = 3/231 (1%) Frame = -3 Query: 1154 FVRNVAL-SEFDQLEDDVEE--VGEQPNLSPDLKLFVGNLPFSVDSAALAGLFERAGNVE 984 FVRNVA+ SEF+ ED + +Q + S DLKLFVGNLPF+VDSA LA LFE AGNVE Sbjct: 59 FVRNVAITSEFEVEEDGFADDAAPQQQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVE 118 Query: 983 MVEVIYDKLTGRSRGFGFVTMSTKAEVEAAEQQFNGYEIDGRALRVNCGPPPEKRENSFG 804 MVEVIYDK+TGRSRGFGFVTMS+ +EVEAA QFNGYE+DGR LRVN GPPP KRE+ F Sbjct: 119 MVEVIYDKVTGRSRGFGFVTMSSVSEVEAAANQFNGYELDGRPLRVNAGPPPPKREDGFS 178 Query: 803 GARDGRSENXXXXXXXXXXXXXXXSNRVYVGNLSWGVDDLALKELFSEQGQVVDAKVVYD 624 + NRVYVGNLSWGVDD+AL+ LF+EQG+VV+A+V+YD Sbjct: 179 RGPRSSFGSSGSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFAEQGKVVEARVIYD 238 Query: 623 RDSGRSRGFGFVTYSSAKEVNNAIDSLNGVDLDGRSIRVSAAEERPPRRQF 471 RDSGRS+GFGFVTY+S++EV NAI+SLNG DLDGR IRVS AE RPPRRQF Sbjct: 239 RDSGRSKGFGFVTYNSSQEVQNAINSLNGADLDGRQIRVSEAEARPPRRQF 289 >gb|AAM66970.1| putative RNA-binding protein [Arabidopsis thaliana] Length = 289 Score = 292 bits (748), Expect = 2e-76 Identities = 153/231 (66%), Positives = 177/231 (76%), Gaps = 3/231 (1%) Frame = -3 Query: 1154 FVRNVAL-SEFDQLEDDVEEVG--EQPNLSPDLKLFVGNLPFSVDSAALAGLFERAGNVE 984 FVRNVA+ SEF+ ED +V ++ + S DLKLFVGNLPF+VDSA LA LFE AGNVE Sbjct: 59 FVRNVAITSEFEVEEDGFADVAPPKEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVE 118 Query: 983 MVEVIYDKLTGRSRGFGFVTMSTKAEVEAAEQQFNGYEIDGRALRVNCGPPPEKRENSFG 804 MVEVIYDK+TGRSRGFGFVTMS+ +EVEAA QQFNGYE+DGR LRVN GPPP KRE+ F Sbjct: 119 MVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQFNGYELDGRPLRVNAGPPPPKREDGFS 178 Query: 803 GARDGRSENXXXXXXXXXXXXXXXSNRVYVGNLSWGVDDLALKELFSEQGQVVDAKVVYD 624 + NRVYVGNLSWGVDD+AL+ LFSEQG+VV+A+V+YD Sbjct: 179 RGPRSSFGSSGSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYD 238 Query: 623 RDSGRSRGFGFVTYSSAKEVNNAIDSLNGVDLDGRSIRVSAAEERPPRRQF 471 RDSGRS+GFGFVTY S++EV NAI SL+G DLDGR IRVS AE RPPRRQ+ Sbjct: 239 RDSGRSKGFGFVTYDSSQEVQNAIKSLDGADLDGRQIRVSEAEARPPRRQY 289 >ref|NP_181259.1| chloroplast RNA binding protein [Arabidopsis thaliana] gi|12230623|sp|Q9ZUU4.1|ROC1_ARATH RecName: Full=Ribonucleoprotein At2g37220, chloroplastic; Flags: Precursor gi|13877809|gb|AAK43982.1|AF370167_1 putative RNA-binding protein [Arabidopsis thaliana] gi|4056477|gb|AAC98043.1| putative RNA-binding protein [Arabidopsis thaliana] gi|15081717|gb|AAK82513.1| At2g37220/F3G5.1 [Arabidopsis thaliana] gi|16323482|gb|AAL15235.1| putative RNA-binding protein [Arabidopsis thaliana] gi|20197716|gb|AAM15222.1| putative RNA-binding protein [Arabidopsis thaliana] gi|330254275|gb|AEC09369.1| chloroplast RNA binding protein [Arabidopsis thaliana] Length = 289 Score = 291 bits (744), Expect = 6e-76 Identities = 152/231 (65%), Positives = 176/231 (76%), Gaps = 3/231 (1%) Frame = -3 Query: 1154 FVRNVAL-SEFDQLEDDVEEVG--EQPNLSPDLKLFVGNLPFSVDSAALAGLFERAGNVE 984 F RNVA+ SEF+ ED +V ++ + S DLKLFVGNLPF+VDSA LA LFE AGNVE Sbjct: 59 FARNVAITSEFEVEEDGFADVAPPKEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVE 118 Query: 983 MVEVIYDKLTGRSRGFGFVTMSTKAEVEAAEQQFNGYEIDGRALRVNCGPPPEKRENSFG 804 MVEVIYDK+TGRSRGFGFVTMS+ +EVEAA QQFNGYE+DGR LRVN GPPP KRE+ F Sbjct: 119 MVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQFNGYELDGRPLRVNAGPPPPKREDGFS 178 Query: 803 GARDGRSENXXXXXXXXXXXXXXXSNRVYVGNLSWGVDDLALKELFSEQGQVVDAKVVYD 624 + NRVYVGNLSWGVDD+AL+ LFSEQG+VV+A+V+YD Sbjct: 179 RGPRSSFGSSGSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYD 238 Query: 623 RDSGRSRGFGFVTYSSAKEVNNAIDSLNGVDLDGRSIRVSAAEERPPRRQF 471 RDSGRS+GFGFVTY S++EV NAI SL+G DLDGR IRVS AE RPPRRQ+ Sbjct: 239 RDSGRSKGFGFVTYDSSQEVQNAIKSLDGADLDGRQIRVSEAEARPPRRQY 289 >ref|XP_006410902.1| hypothetical protein EUTSA_v10017023mg [Eutrema salsugineum] gi|557112071|gb|ESQ52355.1| hypothetical protein EUTSA_v10017023mg [Eutrema salsugineum] Length = 292 Score = 290 bits (742), Expect = 1e-75 Identities = 152/232 (65%), Positives = 177/232 (76%), Gaps = 4/232 (1%) Frame = -3 Query: 1154 FVRNVALSEFDQLEDDV----EEVGEQPNLSPDLKLFVGNLPFSVDSAALAGLFERAGNV 987 FVRNVA++E ++E+D + + + S DLKLFVGNLPF VDSA LA LFE AG V Sbjct: 63 FVRNVAVTEDFEVEEDGIFADDAAPREQSFSADLKLFVGNLPFDVDSARLAQLFESAGTV 122 Query: 986 EMVEVIYDKLTGRSRGFGFVTMSTKAEVEAAEQQFNGYEIDGRALRVNCGPPPEKRENSF 807 E+VEVIYDK+TGRSRGFGFVTMS+ +EVEAA QQFNGYE+DGR LRVN GPPP KRE+ F Sbjct: 123 EIVEVIYDKITGRSRGFGFVTMSSASEVEAAAQQFNGYELDGRPLRVNAGPPPPKREDGF 182 Query: 806 GGARDGRSENXXXXXXXXXXXXXXXSNRVYVGNLSWGVDDLALKELFSEQGQVVDAKVVY 627 +R RS NRVYVGNLSWGVDD+AL+ LF EQG+VV+A+V+Y Sbjct: 183 --SRGPRSSFGSSGSGYGGGSGAGSGNRVYVGNLSWGVDDMALENLFGEQGKVVEARVIY 240 Query: 626 DRDSGRSRGFGFVTYSSAKEVNNAIDSLNGVDLDGRSIRVSAAEERPPRRQF 471 DRDSGRS+GFGFVTY+SA+EV NAI +LNG DLDGR IRVS AE RPPRRQF Sbjct: 241 DRDSGRSKGFGFVTYNSAQEVQNAIRTLNGADLDGRQIRVSEAEARPPRRQF 292 >gb|EMJ06843.1| hypothetical protein PRUPE_ppa009295mg [Prunus persica] Length = 298 Score = 289 bits (739), Expect = 2e-75 Identities = 156/229 (68%), Positives = 184/229 (80%), Gaps = 1/229 (0%) Frame = -3 Query: 1154 FVRNVALS-EFDQLEDDVEEVGEQPNLSPDLKLFVGNLPFSVDSAALAGLFERAGNVEMV 978 FVRNVA+S EF+Q E+ + + GE + +PDLKLFVGNLPFSVDSA LAGLFE AGNVEMV Sbjct: 86 FVRNVAVSSEFEQDEEVLSDDGEA-SFAPDLKLFVGNLPFSVDSAQLAGLFESAGNVEMV 144 Query: 977 EVIYDKLTGRSRGFGFVTMSTKAEVEAAEQQFNGYEIDGRALRVNCGPPPEKRENSFGGA 798 EVIYDK TGRSRGFGFVTMS+ E E A +Q NGYE+DGRALRVN GPPP + E+SF GA Sbjct: 145 EVIYDKTTGRSRGFGFVTMSSVQEAEGAARQLNGYELDGRALRVNYGPPPPRSEDSFRGA 204 Query: 797 RDGRSENXXXXXXXXXXXXXXXSNRVYVGNLSWGVDDLALKELFSEQGQVVDAKVVYDRD 618 R G + SNR+YVGNL+WGVD+LAL+ LFSEQG+V++AKVVYDRD Sbjct: 205 RGGGGSD--------------SSNRLYVGNLAWGVDNLALENLFSEQGKVLEAKVVYDRD 250 Query: 617 SGRSRGFGFVTYSSAKEVNNAIDSLNGVDLDGRSIRVSAAEERPPRRQF 471 SGRSRGFGFVTY +A E+N+A++SL+GVDL+GRSIRV+AAE R PRRQF Sbjct: 251 SGRSRGFGFVTYGTADEMNSAMESLDGVDLNGRSIRVTAAEPR-PRRQF 298 >ref|XP_002323470.1| 29 kDa ribonucleoprotein [Populus trichocarpa] gi|222868100|gb|EEF05231.1| 29 kDa ribonucleoprotein [Populus trichocarpa] Length = 273 Score = 288 bits (738), Expect = 3e-75 Identities = 162/272 (59%), Positives = 192/272 (70%), Gaps = 1/272 (0%) Frame = -3 Query: 1283 FVTPQTFSSLKPNXXXXXXXXXSLPTKNXXXXXXXXXXXSIKPFVRNVALS-EFDQLEDD 1107 F++P + SSLKP P + F++NVA+S EF Q ED Sbjct: 32 FLSPSSTSSLKPVSLLLSFQHQQQPLSSR--------------FLKNVAISSEFGQEEDF 77 Query: 1106 VEEVGEQPNLSPDLKLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFV 927 + + G++ + S DLKLFVGNLPF+VDSA LAGLFE AGNVEMVEVIYDK+TGRSRGFGFV Sbjct: 78 LSD-GDEQSFSQDLKLFVGNLPFNVDSARLAGLFETAGNVEMVEVIYDKVTGRSRGFGFV 136 Query: 926 TMSTKAEVEAAEQQFNGYEIDGRALRVNCGPPPEKRENSFGGARDGRSENXXXXXXXXXX 747 TM+T EVEAA +QFNGYE+DGR LRVN GPPP+K + G R G + Sbjct: 137 TMTTIEEVEAASKQFNGYELDGRTLRVNFGPPPQKESSFSRGPRGGET------------ 184 Query: 746 XXXXXSNRVYVGNLSWGVDDLALKELFSEQGQVVDAKVVYDRDSGRSRGFGFVTYSSAKE 567 NRVYVGNLSW VD+LAL+ LF E+G+V+DAKVVYDRDSGRSRGFGFVTYSSA+E Sbjct: 185 --FDSGNRVYVGNLSWNVDNLALETLFREKGRVMDAKVVYDRDSGRSRGFGFVTYSSAEE 242 Query: 566 VNNAIDSLNGVDLDGRSIRVSAAEERPPRRQF 471 V+NAIDSLNG +LDGR+IRVS AE + PRRQF Sbjct: 243 VDNAIDSLNGAELDGRAIRVSVAEAK-PRRQF 273 >ref|XP_002519525.1| ribonucleoprotein, chloroplast, putative [Ricinus communis] gi|223541388|gb|EEF42939.1| ribonucleoprotein, chloroplast, putative [Ricinus communis] Length = 280 Score = 287 bits (734), Expect = 8e-75 Identities = 161/236 (68%), Positives = 182/236 (77%), Gaps = 8/236 (3%) Frame = -3 Query: 1154 FVRNVALS-EFDQLEDDVEEVGEQPNLSPDLKLFVGNLPFSVDSAALAGLFERAGNVEMV 978 FV +VA+S EF Q E+DV G++ + S DLKLFVGNLPF+VDSA LAGLFE AGNVEMV Sbjct: 63 FVPSVAISSEFGQ-EEDVSSDGDESSFSQDLKLFVGNLPFNVDSAQLAGLFESAGNVEMV 121 Query: 977 EVIYDKLTGRSRGFGFVTMSTKAEVEAAEQQFNGYEIDGRALRVNCGPPPEKRENSF--- 807 EVIYDK+TGRSRGFGFVTMS+ EVEAA QQFNGYE++GRALRVN GPPP+ RE+SF Sbjct: 122 EVIYDKVTGRSRGFGFVTMSSIDEVEAAAQQFNGYELEGRALRVNSGPPPQ-RESSFSRS 180 Query: 806 ----GGARDGRSENXXXXXXXXXXXXXXXSNRVYVGNLSWGVDDLALKELFSEQGQVVDA 639 GG G S NR+YVGNLSW VD+LAL+ FSEQG+VVDA Sbjct: 181 PRFGGGGGGGES---------------LEGNRLYVGNLSWSVDNLALESFFSEQGKVVDA 225 Query: 638 KVVYDRDSGRSRGFGFVTYSSAKEVNNAIDSLNGVDLDGRSIRVSAAEERPPRRQF 471 KVVYDR+SGRSRGFGFVTYSSA+EV NAIDSLNG +LDGR+IRVS AE R PRRQF Sbjct: 226 KVVYDRESGRSRGFGFVTYSSAEEVENAIDSLNGAELDGRAIRVSVAEAR-PRRQF 280