BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00013065
         (509 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006348058.1| PREDICTED: clp protease-related protein At4g...   129   5e-28
ref|XP_004234159.1| PREDICTED: clp protease-related protein At4g...   120   2e-25
gb|EOY22972.1| Double Clp-N motif protein [Theobroma cacao]            81   2e-13
gb|EMJ19497.1| hypothetical protein PRUPE_ppa010759mg [Prunus pe...    78   1e-12
emb|CAN60931.1| hypothetical protein VITISV_006813 [Vitis vinifera]    76   4e-12
ref|XP_002268037.2| PREDICTED: clp protease-related protein At4g...    76   5e-12
gb|EXC20898.1| Clp protease-related protein [Morus notabilis]          74   2e-11
ref|XP_004306484.1| PREDICTED: clp protease-related protein At4g...    69   8e-10
ref|XP_006490254.1| PREDICTED: clp protease-related protein At4g...    66   4e-09
ref|XP_006285475.1| hypothetical protein CARUB_v10006894mg [Caps...    66   5e-09
ref|XP_006413313.1| hypothetical protein EUTSA_v10026111mg [Eutr...    65   7e-09
ref|XP_006413312.1| hypothetical protein EUTSA_v10026111mg [Eutr...    65   7e-09
ref|XP_002510906.1| ATP-dependent clp protease, putative [Ricinu...    65   9e-09
ref|XP_006421758.1| hypothetical protein CICLE_v10005783mg [Citr...    64   2e-08
ref|XP_006421757.1| hypothetical protein CICLE_v10005783mg [Citr...    64   2e-08
ref|XP_004148125.1| PREDICTED: clp protease-related protein At4g...    64   3e-08
gb|ESW30412.1| hypothetical protein PHAVU_002G151400g [Phaseolus...    60   4e-07
ref|XP_002869676.1| clp amino terminal domain-containing protein...    59   5e-07
ref|XP_006856238.1| hypothetical protein AMTR_s00059p00213590 [A...    59   7e-07
ref|NP_001242487.1| uncharacterized protein LOC100786582 [Glycin...    59   7e-07

>ref|XP_006348058.1| PREDICTED: clp protease-related protein At4g12060,
           chloroplastic-like [Solanum tuberosum]
          Length = 235

 Score =  129 bits (323), Expect = 5e-28
 Identities = 71/102 (69%), Positives = 77/102 (75%), Gaps = 1/102 (0%)
 Frame = -1

Query: 305 MATHTFSLLSIQSLXXXXXXXXXXXXXXXT-HKYCKTLATSFTGGKLLIRPQNLNVFSLK 129
           MATH+FSLLSIQSL                 HKYCK LAT+FTGGKLLIRPQNLN F+LK
Sbjct: 1   MATHSFSLLSIQSLTSNSSNKQSENTNTFLTHKYCKALATTFTGGKLLIRPQNLNNFTLK 60

Query: 128 RRRSTVATVAFSLPTAKPERASSEKQPKWSARAIKAFTMGEL 3
           RRRSTVATVAFSLP  +PE  SSEKQPKWS+RAI+AF M EL
Sbjct: 61  RRRSTVATVAFSLPITRPE--SSEKQPKWSSRAIQAFVMAEL 100


>ref|XP_004234159.1| PREDICTED: clp protease-related protein At4g12060,
           chloroplastic-like [Solanum lycopersicum]
          Length = 235

 Score =  120 bits (301), Expect = 2e-25
 Identities = 68/102 (66%), Positives = 72/102 (70%), Gaps = 1/102 (0%)
 Frame = -1

Query: 305 MATHTFSLLSIQSLXXXXXXXXXXXXXXXT-HKYCKTLATSFTGGKLLIRPQNLNVFSLK 129
           MATH+FSLL IQSL                 HKYCK LATSFTGGKLLIRPQNLN  + K
Sbjct: 1   MATHSFSLLPIQSLTSNSSNKQSENTNTFLTHKYCKALATSFTGGKLLIRPQNLNSVTPK 60

Query: 128 RRRSTVATVAFSLPTAKPERASSEKQPKWSARAIKAFTMGEL 3
           RRRSTVATVAFSLP  KPE    EKQPKWS+RAI+AF M EL
Sbjct: 61  RRRSTVATVAFSLPITKPE--GYEKQPKWSSRAIQAFVMAEL 100


>gb|EOY22972.1| Double Clp-N motif protein [Theobroma cacao]
          Length = 230

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 39/63 (61%), Positives = 48/63 (76%)
 Frame = -1

Query: 191 TSFTGGKLLIRPQNLNVFSLKRRRSTVATVAFSLPTAKPERASSEKQPKWSARAIKAFTM 12
           +S  G KLL++  +L++F  K   ST ATV+FSLPTAKPERA SEK PKWSAR+IK+F M
Sbjct: 33  SSLYGNKLLLKTSDLSLFVTKHHSSTTATVSFSLPTAKPERAPSEKSPKWSARSIKSFAM 92

Query: 11  GEL 3
            EL
Sbjct: 93  AEL 95


>gb|EMJ19497.1| hypothetical protein PRUPE_ppa010759mg [Prunus persica]
          Length = 237

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 42/65 (64%), Positives = 49/65 (75%)
 Frame = -1

Query: 197 LATSFTGGKLLIRPQNLNVFSLKRRRSTVATVAFSLPTAKPERASSEKQPKWSARAIKAF 18
           L+T+F G KL IR  NLN  + K R + VATV FSLPTAKP+R S+ K PKWSARAIK+F
Sbjct: 40  LSTTFMGKKLSIRVPNLNHLASKHR-TAVATVLFSLPTAKPDRNSTGKSPKWSARAIKSF 98

Query: 17  TMGEL 3
            MGEL
Sbjct: 99  AMGEL 103


>emb|CAN60931.1| hypothetical protein VITISV_006813 [Vitis vinifera]
          Length = 231

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 49/101 (48%), Positives = 57/101 (56%)
 Frame = -1

Query: 305 MATHTFSLLSIQSLXXXXXXXXXXXXXXXTHKYCKTLATSFTGGKLLIRPQNLNVFSLKR 126
           M+TH+ SLL I                   HK    L +S  G KL I+  +  +    R
Sbjct: 1   MSTHSLSLLPISC--HRNPNDPASPLLLSLHK--NGLXSSLIGQKLSIQSSHSRLVVSTR 56

Query: 125 RRSTVATVAFSLPTAKPERASSEKQPKWSARAIKAFTMGEL 3
            RSTVATV  SLPTAKPER SSEK PKWSARAIK+F+M EL
Sbjct: 57  YRSTVATVLLSLPTAKPERTSSEKVPKWSARAIKSFSMAEL 97


>ref|XP_002268037.2| PREDICTED: clp protease-related protein At4g12060,
           chloroplastic-like [Vitis vinifera]
           gi|296084123|emb|CBI24511.3| unnamed protein product
           [Vitis vinifera]
          Length = 231

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 49/101 (48%), Positives = 57/101 (56%)
 Frame = -1

Query: 305 MATHTFSLLSIQSLXXXXXXXXXXXXXXXTHKYCKTLATSFTGGKLLIRPQNLNVFSLKR 126
           M+TH+ SLL I                   HK    L +S  G KL I+  +  +    R
Sbjct: 1   MSTHSLSLLPISC--HRNPNDPASPLLLSLHK--NGLFSSLIGQKLSIQSSHSRLVVSTR 56

Query: 125 RRSTVATVAFSLPTAKPERASSEKQPKWSARAIKAFTMGEL 3
            RSTVATV  SLPTAKPER SSEK PKWSARAIK+F+M EL
Sbjct: 57  YRSTVATVLLSLPTAKPERTSSEKVPKWSARAIKSFSMAEL 97


>gb|EXC20898.1| Clp protease-related protein [Morus notabilis]
          Length = 257

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 40/65 (61%), Positives = 48/65 (73%)
 Frame = -1

Query: 197 LATSFTGGKLLIRPQNLNVFSLKRRRSTVATVAFSLPTAKPERASSEKQPKWSARAIKAF 18
           L+TS  G +LLIRP N    + KRR + +ATV FSLPTAK +RAS+EK P WSARAIK+F
Sbjct: 40  LSTSCVGRQLLIRPTNFKNLASKRRPA-IATVLFSLPTAKTDRASNEKIPNWSARAIKSF 98

Query: 17  TMGEL 3
            M EL
Sbjct: 99  AMAEL 103


>ref|XP_004306484.1| PREDICTED: clp protease-related protein At4g12060,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 225

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 39/65 (60%), Positives = 45/65 (69%)
 Frame = -1

Query: 197 LATSFTGGKLLIRPQNLNVFSLKRRRSTVATVAFSLPTAKPERASSEKQPKWSARAIKAF 18
           L+TSF G KL I   + N F+ K   + VATV FSLPT KPER SS K  +WSARAIK+F
Sbjct: 27  LSTSFLGRKLSIEIPHSNKFASKHP-TPVATVLFSLPTGKPERISSGKTSQWSARAIKSF 85

Query: 17  TMGEL 3
            MGEL
Sbjct: 86  AMGEL 90


>ref|XP_006490254.1| PREDICTED: clp protease-related protein At4g12060,
           chloroplastic-like [Citrus sinensis]
          Length = 233

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 40/67 (59%), Positives = 48/67 (71%), Gaps = 3/67 (4%)
 Frame = -1

Query: 194 ATSFTGGKLLIRPQ-NLNVFSLKRRRSTV-ATVAFSLPTA-KPERASSEKQPKWSARAIK 24
           ++S  G KLLIRPQ N + F  K  RS+  ATV+FSLPT  KPE AS +K PKWSARAI+
Sbjct: 32  SSSMFGNKLLIRPQLNSSRFVTKYHRSSATATVSFSLPTTVKPETASPDKIPKWSARAIR 91

Query: 23  AFTMGEL 3
           +F M EL
Sbjct: 92  SFAMAEL 98


>ref|XP_006285475.1| hypothetical protein CARUB_v10006894mg [Capsella rubella]
           gi|482554180|gb|EOA18373.1| hypothetical protein
           CARUB_v10006894mg [Capsella rubella]
          Length = 239

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 33/65 (50%), Positives = 42/65 (64%)
 Frame = -1

Query: 197 LATSFTGGKLLIRPQNLNVFSLKRRRSTVATVAFSLPTAKPERASSEKQPKWSARAIKAF 18
           L +S  G KLL+ P +   F  K R  T A+   ++PTA+PE  SS+K PKWSARAIK+ 
Sbjct: 36  LTSSLLGKKLLVTPPSRRCFVSKNRCLTSASTVLNVPTAQPENGSSDKIPKWSARAIKSL 95

Query: 17  TMGEL 3
            MGEL
Sbjct: 96  AMGEL 100


>ref|XP_006413313.1| hypothetical protein EUTSA_v10026111mg [Eutrema salsugineum]
           gi|557114483|gb|ESQ54766.1| hypothetical protein
           EUTSA_v10026111mg [Eutrema salsugineum]
          Length = 241

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 33/63 (52%), Positives = 41/63 (65%)
 Frame = -1

Query: 191 TSFTGGKLLIRPQNLNVFSLKRRRSTVATVAFSLPTAKPERASSEKQPKWSARAIKAFTM 12
           TS  G KLL+   +   F  K R  T A+  FS+PTA+PE  SS+K PKWSAR+IK+  M
Sbjct: 40  TSLLGKKLLVTKPSRRCFVSKHRCLTSASTVFSVPTAQPENGSSDKLPKWSARSIKSLAM 99

Query: 11  GEL 3
           GEL
Sbjct: 100 GEL 102


>ref|XP_006413312.1| hypothetical protein EUTSA_v10026111mg [Eutrema salsugineum]
           gi|557114482|gb|ESQ54765.1| hypothetical protein
           EUTSA_v10026111mg [Eutrema salsugineum]
          Length = 237

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 33/63 (52%), Positives = 41/63 (65%)
 Frame = -1

Query: 191 TSFTGGKLLIRPQNLNVFSLKRRRSTVATVAFSLPTAKPERASSEKQPKWSARAIKAFTM 12
           TS  G KLL+   +   F  K R  T A+  FS+PTA+PE  SS+K PKWSAR+IK+  M
Sbjct: 40  TSLLGKKLLVTKPSRRCFVSKHRCLTSASTVFSVPTAQPENGSSDKLPKWSARSIKSLAM 99

Query: 11  GEL 3
           GEL
Sbjct: 100 GEL 102


>ref|XP_002510906.1| ATP-dependent clp protease, putative [Ricinus communis]
           gi|223550021|gb|EEF51508.1| ATP-dependent clp protease,
           putative [Ricinus communis]
          Length = 227

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 45/101 (44%), Positives = 52/101 (51%)
 Frame = -1

Query: 305 MATHTFSLLSIQSLXXXXXXXXXXXXXXXTHKYCKTLATSFTGGKLLIRPQNLNVFSLKR 126
           MAT TFS LSI                   H       +SF G KLLI+  N + F LK 
Sbjct: 1   MATQTFSFLSIS------LPTSKIYVEKPHHSSLLLPLSSFHGNKLLIKQSNFSNFVLKS 54

Query: 125 RRSTVATVAFSLPTAKPERASSEKQPKWSARAIKAFTMGEL 3
             ST ATV  SLPT   +R  S K PKWSARAI++F +GEL
Sbjct: 55  HGSTAATVLSSLPT---KRHPSGKIPKWSARAIRSFGLGEL 92


>ref|XP_006421758.1| hypothetical protein CICLE_v10005783mg [Citrus clementina]
           gi|557523631|gb|ESR34998.1| hypothetical protein
           CICLE_v10005783mg [Citrus clementina]
          Length = 233

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 37/67 (55%), Positives = 45/67 (67%), Gaps = 3/67 (4%)
 Frame = -1

Query: 194 ATSFTGGKLLIRPQ--NLNVFSLKRRRSTVATVAFSLPTA-KPERASSEKQPKWSARAIK 24
           ++S  G KLLIRPQ  +    +   R S  ATV+FSLPT  KPE AS +K PKWSARAI+
Sbjct: 32  SSSMFGNKLLIRPQLSSSRFVTKYHRSSATATVSFSLPTTVKPETASPDKIPKWSARAIR 91

Query: 23  AFTMGEL 3
           +F M EL
Sbjct: 92  SFAMAEL 98


>ref|XP_006421757.1| hypothetical protein CICLE_v10005783mg [Citrus clementina]
           gi|557523630|gb|ESR34997.1| hypothetical protein
           CICLE_v10005783mg [Citrus clementina]
          Length = 182

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 37/67 (55%), Positives = 45/67 (67%), Gaps = 3/67 (4%)
 Frame = -1

Query: 194 ATSFTGGKLLIRPQ--NLNVFSLKRRRSTVATVAFSLPTA-KPERASSEKQPKWSARAIK 24
           ++S  G KLLIRPQ  +    +   R S  ATV+FSLPT  KPE AS +K PKWSARAI+
Sbjct: 32  SSSMFGNKLLIRPQLSSSRFVTKYHRSSATATVSFSLPTTVKPETASPDKIPKWSARAIR 91

Query: 23  AFTMGEL 3
           +F M EL
Sbjct: 92  SFAMAEL 98


>ref|XP_004148125.1| PREDICTED: clp protease-related protein At4g12060,
           chloroplastic-like [Cucumis sativus]
           gi|449499662|ref|XP_004160878.1| PREDICTED: clp
           protease-related protein At4g12060, chloroplastic-like
           [Cucumis sativus]
          Length = 234

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 35/58 (60%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
 Frame = -1

Query: 173 KLLIRPQNLNVFSLK-RRRSTVATVAFSLPTAKPERASSEKQPKWSARAIKAFTMGEL 3
           KL I+  N     LK  RR+T ATV+FSLP +KPE    EK PKWSARAIK+F MGEL
Sbjct: 43  KLAIKRSNATHPVLKFSRRATTATVSFSLPASKPEGVPPEKLPKWSARAIKSFAMGEL 100


>gb|ESW30412.1| hypothetical protein PHAVU_002G151400g [Phaseolus vulgaris]
          Length = 234

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 34/63 (53%), Positives = 44/63 (69%), Gaps = 4/63 (6%)
 Frame = -1

Query: 179 GGKLLIRPQNLNV---FSLKRRRSTVATVAFSLPTAKPERAS-SEKQPKWSARAIKAFTM 12
           G KL + P +LN+    S+ R R   ATV+FSLPTAK ERAS  ++ PKWS++AIK+F M
Sbjct: 38  GTKLRVSPCSLNLRNHVSVSRHRPLPATVSFSLPTAKAERASPGQEFPKWSSKAIKSFAM 97

Query: 11  GEL 3
            EL
Sbjct: 98  SEL 100


>ref|XP_002869676.1| clp amino terminal domain-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297315512|gb|EFH45935.1| clp amino
           terminal domain-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 239

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 31/65 (47%), Positives = 41/65 (63%)
 Frame = -1

Query: 197 LATSFTGGKLLIRPQNLNVFSLKRRRSTVATVAFSLPTAKPERASSEKQPKWSARAIKAF 18
           L +S +G KL+    +   F  K R  T A+   ++PTA+PE  SS+K PKWSARAIK+ 
Sbjct: 36  LTSSLSGKKLVATQPSHRCFVPKLRCLTSASTVLNVPTAQPENGSSDKIPKWSARAIKSL 95

Query: 17  TMGEL 3
            MGEL
Sbjct: 96  AMGEL 100


>ref|XP_006856238.1| hypothetical protein AMTR_s00059p00213590 [Amborella trichopoda]
           gi|548860097|gb|ERN17705.1| hypothetical protein
           AMTR_s00059p00213590 [Amborella trichopoda]
          Length = 241

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 28/42 (66%), Positives = 33/42 (78%)
 Frame = -1

Query: 128 RRRSTVATVAFSLPTAKPERASSEKQPKWSARAIKAFTMGEL 3
           +RR ++ TV   LPTAKPERASS K P+WSARAIK+F M EL
Sbjct: 65  KRRCSITTVFMMLPTAKPERASSGKVPRWSARAIKSFGMAEL 106


>ref|NP_001242487.1| uncharacterized protein LOC100786582 [Glycine max]
           gi|255639105|gb|ACU19852.1| unknown [Glycine max]
          Length = 260

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 33/73 (45%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
 Frame = -1

Query: 215 HKYCKTLATSFTGGKLLIRPQNLNVFSLKRR--RSTVATVAFSLPTAKPERASSEKQPKW 42
           + +C    TS  G ++ +     +  SL     R+T ATV+FSLPT KP   + EK PKW
Sbjct: 50  NNHCTLSPTSLFGTRITLLRATSSSRSLPNTNCRATSATVSFSLPTPKPLSDTPEKTPKW 109

Query: 41  SARAIKAFTMGEL 3
           SARAIK++ MGEL
Sbjct: 110 SARAIKSYAMGEL 122