BLASTX nr result

ID: Atropa21_contig00013013 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00013013
         (726 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006367861.1| PREDICTED: uncharacterized protein LOC102578...    92   2e-16
gb|AAL30109.1| unknown [Solanum phureja x Solanum stenotomum]          54   1e-07
ref|XP_006361065.1| PREDICTED: putative NPIP-like protein LOC613...    52   8e-07
ref|XP_006338203.1| PREDICTED: transmembrane 9 superfamily membe...    57   6e-06

>ref|XP_006367861.1| PREDICTED: uncharacterized protein LOC102578882, partial [Solanum
           tuberosum]
          Length = 606

 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 66/190 (34%), Positives = 85/190 (44%), Gaps = 14/190 (7%)
 Frame = +2

Query: 2   LRKAIPDQCAIKGPATIGLWDDRHILIRLSLLEDYVYACLVH*NP*KILSNA-------- 157
           LRK IP QC +KG   IGL  +R++LIR SLLEDYV          K+LS          
Sbjct: 58  LRKLIPKQCELKGEVDIGLLCNRYVLIRASLLEDYV----------KLLSKPQFYITHNH 107

Query: 158 ------TPDMEPLVQAGCGNFHSFGWICFPELPPKVFARDAVFSMTLAVGKPLIVDLATA 319
                 T   +PL         +  WI FP LPP  F ++ +FSM  AVG+PL VDLAT 
Sbjct: 108 WSYPMRTLKWDPLFDPEEETTTAIAWISFPSLPPNFFGKETIFSMAAAVGRPLQVDLATQ 167

Query: 320 NKIGPSKVLYSLQISSPWRV*M*STTSKTYAILDNEEKSKDKEETTCERSNSKNGLKTVF 499
           NK  PS                        A  + +E+ +D +E   ER N  +G     
Sbjct: 168 NKTKPS-----------------------CARTEEKEQKQDNKENKGERGNQADGKCANG 204

Query: 500 MKREGDQRVR 529
            K+E   RV+
Sbjct: 205 EKQEQGDRVQ 214


>gb|AAL30109.1| unknown [Solanum phureja x Solanum stenotomum]
          Length = 126

 Score = 53.5 bits (127), Expect(2) = 1e-07
 Identities = 26/35 (74%), Positives = 28/35 (80%)
 Frame = +2

Query: 2   LRKAIPDQCAIKGPATIGLWDDRHILIRLSLLEDY 106
           LRKAIP Q  IKGP  IG  ++RHILIRLSLLEDY
Sbjct: 42  LRKAIPIQLEIKGPCNIGFLEERHILIRLSLLEDY 76



 Score = 28.9 bits (63), Expect(2) = 1e-07
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +3

Query: 126 IKIHERYYQMRPLIWNL*FKPDVETFIVLAGFVF 227
           +++  RY+ +R L W+  F P+ ET I +A   F
Sbjct: 86  LRVRNRYFPLRFLKWDPWFNPEEETTIAIAWISF 119


>ref|XP_006361065.1| PREDICTED: putative NPIP-like protein LOC613037-like [Solanum
           tuberosum]
          Length = 499

 Score = 52.4 bits (124), Expect(2) = 8e-07
 Identities = 25/50 (50%), Positives = 34/50 (68%)
 Frame = +2

Query: 215 WICFPELPPKVFARDAVFSMTLAVGKPLIVDLATANKIGPSKVLYSLQIS 364
           WI FP LP + FAR+A+FSM  AVG+PL VD AT +K  PS     ++++
Sbjct: 3   WISFPSLPCQYFARNALFSMASAVGQPLDVDRATYDKTRPSTARVKVEVN 52



 Score = 27.3 bits (59), Expect(2) = 8e-07
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +3

Query: 342 YCTHCKFQVHGEFECRAL 395
           YC  CK Q H E +CR L
Sbjct: 88  YCKRCKHQGHREADCRTL 105


>ref|XP_006338203.1| PREDICTED: transmembrane 9 superfamily member 4-like [Solanum
           tuberosum]
          Length = 1068

 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 25/44 (56%), Positives = 31/44 (70%)
 Frame = +2

Query: 206 SFGWICFPELPPKVFARDAVFSMTLAVGKPLIVDLATANKIGPS 337
           +  WI FP LPP  F R+ VFS+ +AVGKPL VD+AT N+  PS
Sbjct: 11  AIAWISFPALPPNFFGREVVFSLAVAVGKPLQVDMATRNQTRPS 54


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