BLASTX nr result
ID: Atropa21_contig00012913
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00012913
(1392 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein A... 83 6e-27
ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein A... 72 2e-23
ref|XP_006354689.1| PREDICTED: uncharacterized protein LOC102605... 74 7e-20
ref|XP_006343440.1| PREDICTED: uncharacterized protein LOC102595... 73 3e-10
ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596... 66 1e-08
ref|XP_006344597.1| PREDICTED: uncharacterized protein LOC102605... 67 2e-08
ref|XP_006338863.1| PREDICTED: uncharacterized protein LOC102579... 66 3e-08
ref|XP_006365287.1| PREDICTED: uncharacterized protein LOC102597... 66 4e-08
ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601... 44 1e-07
ref|XP_006355175.1| PREDICTED: putative ribonuclease H protein A... 64 2e-07
ref|XP_004253498.1| PREDICTED: putative ribonuclease H protein A... 41 9e-07
ref|XP_004239568.1| PREDICTED: putative ribonuclease H protein A... 42 4e-06
>ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 885
Score = 82.8 bits (203), Expect(3) = 6e-27
Identities = 37/69 (53%), Positives = 50/69 (72%)
Frame = -2
Query: 1091 KYFCCPAGLNIDGMQLQQVIIKWWNSPVSARLQLLYRAVPSIIM*EIWKRRNSIKHGEVI 912
+YF AG+NIDGM LQQ+II WW + +LQ +Y+A+P+IIM +WKRRN++KH I
Sbjct: 589 RYFAHFAGINIDGMHLQQLIISWWKHEATPKLQGIYKAIPAIIMWTLWKRRNALKHDSSI 648
Query: 911 SFYRMVHQV 885
S+ RMV V
Sbjct: 649 SWERMVEMV 657
Score = 63.5 bits (153), Expect(3) = 6e-27
Identities = 33/73 (45%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Frame = -1
Query: 792 KLQCIRVCWSPPPLHWVKFNTDGATQGEIHMD---FCISDSDGDFIRGQAMEINVTTDTE 622
K+ +RV W PP H+VK NTDGA +G + FCI D GD I +A I + T+ E
Sbjct: 692 KIHVLRVTWKPPDDHYVKSNTDGACRGNPGLSSFGFCIRDDKGDLIYAKAKGIGIATNME 751
Query: 621 AEAVVINEALNYC 583
AE V I AL C
Sbjct: 752 AETVAILTALREC 764
Score = 23.1 bits (48), Expect(3) = 6e-27
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -3
Query: 1141 KQETMTHLFCHSP 1103
K+ETMTHLF +P
Sbjct: 570 KEETMTHLFPTAP 582
>ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 1035
Score = 72.4 bits (176), Expect(2) = 2e-23
Identities = 32/76 (42%), Positives = 50/76 (65%)
Frame = -2
Query: 1091 KYFCCPAGLNIDGMQLQQVIIKWWNSPVSARLQLLYRAVPSIIM*EIWKRRNSIKHGEVI 912
K F AG+ I+G+ LQQ+I KWW+ S +L + +AV ++IM E+WKRRNS +HG+
Sbjct: 560 KQFASYAGIIINGLNLQQLIFKWWDYKASNKLSQILKAVLAVIMWELWKRRNSYRHGKET 619
Query: 911 SFYRMVHQVNITIYYL 864
++ M +Q + +Y L
Sbjct: 620 TYNNMYYQCQLILYQL 635
Score = 65.1 bits (157), Expect(2) = 2e-23
Identities = 34/88 (38%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Frame = -1
Query: 828 PEMLKFLENAVPKLQCIRVCWSPPPLHWVKFNTDGATQGEIHMD---FCISDSDGDFIRG 658
P+++ L+N P L V W P WV NTDGA++G M +CI D +GD +
Sbjct: 651 PQVVGMLQNYKPPLHYKVVRWRKPSEGWVTCNTDGASKGNPRMSSYGYCIRDKNGDLLYA 710
Query: 657 QAMEINVTTDTEAEAVVINEALNYCVAN 574
+A I TT+ EAEA + +AL +C N
Sbjct: 711 EAHNIGETTNMEAEATTVWKALQFCYEN 738
>ref|XP_006354689.1| PREDICTED: uncharacterized protein LOC102605437 [Solanum tuberosum]
Length = 333
Score = 73.9 bits (180), Expect(2) = 7e-20
Identities = 31/76 (40%), Positives = 52/76 (68%)
Frame = -2
Query: 1085 FCCPAGLNIDGMQLQQVIIKWWNSPVSARLQLLYRAVPSIIM*EIWKRRNSIKHGEVISF 906
F AG++++G+QL QV+IKWW S L+ L R VP++++ +WKRRN++KHG S+
Sbjct: 51 FANVAGISLEGLQLSQVVIKWWTSDSCPILKPLMRVVPTVVIWNLWKRRNNLKHGRPSSY 110
Query: 905 YRMVHQVNITIYYLSK 858
+V++VN ++ L +
Sbjct: 111 NNLVYRVNSDLWKLGR 126
Score = 51.6 bits (122), Expect(2) = 7e-20
Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Frame = -1
Query: 825 EMLKFLENAVPKLQCIRVCWSPPPLHWVKFNTDGATQGEIHMD---FCISDSDGDFIRGQ 655
+++ LE PKL + VCW PP + NTD A++ + FC+ +S GD + Q
Sbjct: 141 DIVACLEKHKPKLYYLPVCWKPPE-GILTCNTDVASRCNPEISSYGFCLRNSVGDLVYVQ 199
Query: 654 AMEINVTTDTEAEAVVINEALNYCV 580
EI T+ E EAV I E L +CV
Sbjct: 200 GKEIQEGTNLEVEAVAIREDLAHCV 224
>ref|XP_006343440.1| PREDICTED: uncharacterized protein LOC102595406 [Solanum tuberosum]
Length = 866
Score = 72.8 bits (177), Expect = 3e-10
Identities = 52/165 (31%), Positives = 83/165 (50%), Gaps = 17/165 (10%)
Frame = -1
Query: 1026 MVEQSSECKITTAISCSSIDYYVRNLEEKELNQARRSDILL*DGASSEYNDILLVEKRNL 847
MV+ + + T + +Y + N+E+K+ +Q + YN LV + L
Sbjct: 645 MVDSTGRSQTPTNYENYACNYTLGNMEKKKYHQT---------WGNMTYNK--LVYQVTL 693
Query: 846 NV----------LRSCP----EMLKFLENAVPKLQCIRVCWSPPPLHWVKFNTDGATQG- 712
NV ++ P +M+KFLEN P++ ++ W PP + K NTDGA++G
Sbjct: 694 NVWQFARSSFPSMKQFPTNWSDMVKFLENYKPRIYYKKIIWMPPNSNTRKCNTDGASKGN 753
Query: 711 --EIHMDFCISDSDGDFIRGQAMEINVTTDTEAEAVVINEALNYC 583
+ +C+ D +G+ I QA EI TT+ EAEAV I EA+ +C
Sbjct: 754 PGKSSYAYCLRDQEGNLIYAQAEEIPETTNVEAEAVAIKEAIYHC 798
>ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596481 [Solanum tuberosum]
Length = 1135
Score = 65.9 bits (159), Expect(2) = 1e-08
Identities = 29/63 (46%), Positives = 44/63 (69%)
Frame = -2
Query: 1073 AGLNIDGMQLQQVIIKWWNSPVSARLQLLYRAVPSIIM*EIWKRRNSIKHGEVISFYRMV 894
AG+ I+ M LQQ+II WW +A+L+++ RA+P+IIM +WKRRN+ KH ++ +V
Sbjct: 972 AGIQIESMHLQQLIINWWKHSDNAKLKVVMRAMPTIIMWTLWKRRNNFKHRGTTTYSEVV 1031
Query: 893 HQV 885
QV
Sbjct: 1032 MQV 1034
Score = 21.9 bits (45), Expect(2) = 1e-08
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -3
Query: 1141 KQETMTHLFCHSPDA 1097
++ETMTH+F +P A
Sbjct: 947 EEETMTHIFLTAPIA 961
>ref|XP_006344597.1| PREDICTED: uncharacterized protein LOC102605041 [Solanum tuberosum]
Length = 220
Score = 67.0 bits (162), Expect = 2e-08
Identities = 32/77 (41%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Frame = -1
Query: 795 PKLQCIRVCWSPPPLHWVKFNTDGATQGEIH---MDFCISDSDGDFIRGQAMEINVTTDT 625
P V WSPPPL W K NTDGA++G + FC+ DS GD + + + I TT+
Sbjct: 69 PSFTSREVRWSPPPLGWWKCNTDGASRGNSGPSTIAFCVRDSSGDLVGAKGLRIQDTTNI 128
Query: 624 EAEAVVINEALNYCVAN 574
AEA+ + E YC+ N
Sbjct: 129 TAEAMALKEGRKYCLEN 145
>ref|XP_006338863.1| PREDICTED: uncharacterized protein LOC102579795 [Solanum tuberosum]
Length = 778
Score = 66.2 bits (160), Expect = 3e-08
Identities = 30/71 (42%), Positives = 46/71 (64%)
Frame = -2
Query: 1073 AGLNIDGMQLQQVIIKWWNSPVSARLQLLYRAVPSIIM*EIWKRRNSIKHGEVISFYRMV 894
AG+ +QL+ I KWWN+ SA+L+ L+ A+P I+ E WK RN++KHG IS Y M+
Sbjct: 26 AGIEGPFLQLKDTIFKWWNANCSAKLRPLFNAIPGFILWESWKGRNTVKHGGKISRYNML 85
Query: 893 HQVNITIYYLS 861
++ I+ L+
Sbjct: 86 AEITRNIHNLA 96
>ref|XP_006365287.1| PREDICTED: uncharacterized protein LOC102597191 [Solanum tuberosum]
Length = 305
Score = 65.9 bits (159), Expect = 4e-08
Identities = 33/61 (54%), Positives = 40/61 (65%), Gaps = 3/61 (4%)
Frame = -2
Query: 1364 KVDKTIRK---MVPANIFWCIWTDGNKKCFDGLSTANCSLHTRFLVNLFCWTKLSPVKHS 1194
KVDK I+K M+PA IFW IW + NK+CFDG STA L TR NLF WT L P ++
Sbjct: 233 KVDKAIKKIWIMIPACIFWSIWLERNKRCFDGESTALGILKTRCTENLFSWTNLYPAVNA 292
Query: 1193 D 1191
+
Sbjct: 293 E 293
>ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601483 [Solanum tuberosum]
Length = 2019
Score = 43.5 bits (101), Expect(2) = 1e-07
Identities = 18/58 (31%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = -2
Query: 1091 KYFCCPAGLNIDGMQLQQVIIKWWNSPVSARL-QLLYRAVPSIIM*EIWKRRNSIKHG 921
KYF G+ D + L+ +I++WW++P + +L+ + P I +WK R ++K+G
Sbjct: 958 KYFAISLGIRTDFLPLRNMIMRWWSAPHNNEAHKLILHSTPIFICWNLWKNRCAVKYG 1015
Score = 40.8 bits (94), Expect(2) = 1e-07
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Frame = -1
Query: 810 LENAVPKLQCIRVCWSPPPLHWVKFNTDG---ATQGEIHMDFCISDSDGDFIRGQAMEIN 640
+EN + V W+ PP WVK NTDG + G I I + G+ I + +
Sbjct: 1056 IENCSQDTKVTAVQWTKPPYRWVKLNTDGSALSNPGSIGAGDVIRNHLGEIILAYSTPLG 1115
Query: 639 VTTDTEAEAVVINEALNYCVANMEWSQ 559
T+ +AE + +C+ +M+++Q
Sbjct: 1116 TGTNNQAEVEAAIFGIAWCI-HMKYNQ 1141
>ref|XP_006355175.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 143
Score = 63.9 bits (154), Expect = 2e-07
Identities = 31/85 (36%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
Frame = -1
Query: 822 MLKFLENAVPKLQCIRVCWSPPPLHWVKFNTDGATQG---EIHMDFCISDSDGDFIRGQA 652
M+ L++ P L V W PP + W+K NTDGA++G + FCI + G+ + +
Sbjct: 1 MVALLQSYKPTLYYHVVNWKPPEIGWIKCNTDGASKGNPDQSSYGFCIRNHTGELLYAEV 60
Query: 651 MEINVTTDTEAEAVVINEALNYCVA 577
I VTT+ +AE++ I +AL YC++
Sbjct: 61 QSIGVTTNMDAESMAIWKALQYCLS 85
>ref|XP_004253498.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 308
Score = 41.2 bits (95), Expect(2) = 9e-07
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = -2
Query: 1091 KYFCCPAGLNIDGMQLQQVIIKWWNS-PVSARLQLLYRAVPSIIM*EIWKRRNSIKHGEV 915
K F AGL D LQ + KWW + P + QLL +A P I +WK R + K+G
Sbjct: 19 KSFAASAGLQHDQTTLQARLEKWWTANPRNEGHQLLLQATPIFICWNLWKNRCASKYGGK 78
Query: 914 ISFYRMVHQVNITIY 870
++ + +V IY
Sbjct: 79 ATY---ISRVKYAIY 90
Score = 40.0 bits (92), Expect(2) = 9e-07
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Frame = -1
Query: 807 ENAVPKLQCIRVCWSPPPLHWVKFNTDGA---TQGEIHMDFCISDSDGDFIRGQAMEINV 637
E +++ +V W+ PP W+K NTDG+ G+I I D DG I A +
Sbjct: 118 ERCKHEIKVCKVTWNRPPEEWIKINTDGSALTNPGKIGAGGIIRDKDGKLILAFATSLGE 177
Query: 636 TTDTEAE 616
++ +AE
Sbjct: 178 GSNNKAE 184
>ref|XP_004239568.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 308
Score = 42.4 bits (98), Expect(2) = 4e-06
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = -2
Query: 1088 YFCCPAGLNIDGMQLQQVIIKWWNS-PVSARLQLLYRAVPSIIM*EIWKRRNSIKHG 921
+F AGL D LQ + +WW + P + QLL +A P+ I +WK R + K+G
Sbjct: 20 FFAASAGLQADHSSLQARVQQWWTARPQNEGHQLLLQATPTFICWNLWKNRCACKYG 76
Score = 36.6 bits (83), Expect(2) = 4e-06
Identities = 19/84 (22%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Frame = -1
Query: 822 MLKFLENAVPKLQCIRVCWSPPPLHWVKFNTDGA---TQGEIHMDFCISDSDGDFIRGQA 652
+++ E +++ V W+ PP W+K NTDG+ G+I + D +G + A
Sbjct: 113 LIQTSEKCKHEIKVCMVAWNRPPEQWIKINTDGSALTNLGQIGAGGILRDREGKMVLAFA 172
Query: 651 MEINVTTDTEAEAVVINEALNYCV 580
+ ++ +AE L++ +
Sbjct: 173 TPLGEGSNNKAETAAALFGLSWAL 196