BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00012875
         (661 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006347063.1| PREDICTED: splicing factor U2af large subuni...    81   3e-13
ref|XP_006856065.1| hypothetical protein AMTR_s00059p00102910 [A...    60   4e-07
ref|XP_004979989.1| PREDICTED: splicing factor U2af large subuni...    59   1e-06
ref|XP_003598049.1| Splicing factor U2af large subunit B [Medica...    59   1e-06
ref|XP_003598048.1| Splicing factor U2af large subunit B [Medica...    59   1e-06
ref|XP_003598047.1| Splicing factor U2af large subunit B [Medica...    59   1e-06
ref|XP_003589450.1| Splicing factor U2af large subunit B [Medica...    59   1e-06
ref|XP_006663107.1| PREDICTED: splicing factor U2af large subuni...    59   2e-06
ref|XP_004499573.1| PREDICTED: splicing factor U2af large subuni...    59   2e-06
ref|XP_004499572.1| PREDICTED: splicing factor U2af large subuni...    59   2e-06
ref|XP_006827799.1| hypothetical protein AMTR_s00009p00267190 [A...    58   2e-06
ref|XP_002310209.2| hypothetical protein POPTR_0007s12550g [Popu...    58   3e-06
gb|EMJ04963.1| hypothetical protein PRUPE_ppa003118mg [Prunus pe...    58   3e-06
gb|EMT00217.1| Splicing factor U2af large subunit B [Aegilops ta...    57   4e-06
gb|EMS55481.1| Splicing factor U2af large subunit B [Triticum ur...    57   4e-06
sp|Q2QKB4.1|U2A2B_WHEAT RecName: Full=Splicing factor U2af large...    57   4e-06
ref|XP_003635431.1| PREDICTED: splicing factor U2af large subuni...    57   4e-06
ref|XP_002267854.2| PREDICTED: splicing factor U2af large subuni...    57   4e-06
emb|CBI35711.3| unnamed protein product [Vitis vinifera]               57   4e-06
emb|CBI25913.3| unnamed protein product [Vitis vinifera]               57   4e-06

>ref|XP_006347063.1| PREDICTED: splicing factor U2af large subunit B-like [Solanum
           tuberosum]
          Length = 541

 Score = 80.9 bits (198), Expect = 3e-13
 Identities = 35/42 (83%), Positives = 40/42 (95%)
 Frame = +3

Query: 3   PDQQMIEGLGKVFLEYSDTVGCTKAKAALGGRKFGGNTVIAI 128
           PDQ+M++G GKVFLEYSDT+GCTKAKAALGGRKFGGNT +AI
Sbjct: 486 PDQKMVDGFGKVFLEYSDTIGCTKAKAALGGRKFGGNTAVAI 527


>ref|XP_006856065.1| hypothetical protein AMTR_s00059p00102910 [Amborella trichopoda]
           gi|548859924|gb|ERN17532.1| hypothetical protein
           AMTR_s00059p00102910 [Amborella trichopoda]
          Length = 551

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 27/42 (64%), Positives = 33/42 (78%)
 Frame = +3

Query: 3   PDQQMIEGLGKVFLEYSDTVGCTKAKAALGGRKFGGNTVIAI 128
           P  +   G+GKVFLEYSDT G +KA+A L GRKFGGNTV+A+
Sbjct: 496 PIGEQFPGVGKVFLEYSDTEGASKARATLNGRKFGGNTVVAV 537


>ref|XP_004979989.1| PREDICTED: splicing factor U2af large subunit B-like [Setaria
           italica]
          Length = 530

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 26/42 (61%), Positives = 32/42 (76%)
 Frame = +3

Query: 3   PDQQMIEGLGKVFLEYSDTVGCTKAKAALGGRKFGGNTVIAI 128
           P  Q++ G+GKVFLEY+D  G  KAK AL GRKFGGN V+A+
Sbjct: 475 PSGQLVAGVGKVFLEYADVDGAAKAKTALHGRKFGGNPVVAV 516


>ref|XP_003598049.1| Splicing factor U2af large subunit B [Medicago truncatula]
           gi|355487097|gb|AES68300.1| Splicing factor U2af large
           subunit B [Medicago truncatula]
          Length = 627

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 26/42 (61%), Positives = 33/42 (78%)
 Frame = +3

Query: 3   PDQQMIEGLGKVFLEYSDTVGCTKAKAALGGRKFGGNTVIAI 128
           PD ++  G+GKVFLEY+D  G TKA++ L GRKFGGN VIA+
Sbjct: 572 PDGELCPGVGKVFLEYADVDGSTKARSGLNGRKFGGNQVIAV 613


>ref|XP_003598048.1| Splicing factor U2af large subunit B [Medicago truncatula]
           gi|355487096|gb|AES68299.1| Splicing factor U2af large
           subunit B [Medicago truncatula]
          Length = 629

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 26/42 (61%), Positives = 33/42 (78%)
 Frame = +3

Query: 3   PDQQMIEGLGKVFLEYSDTVGCTKAKAALGGRKFGGNTVIAI 128
           PD ++  G+GKVFLEY+D  G TKA++ L GRKFGGN VIA+
Sbjct: 574 PDGELCPGVGKVFLEYADVDGSTKARSGLNGRKFGGNQVIAV 615


>ref|XP_003598047.1| Splicing factor U2af large subunit B [Medicago truncatula]
           gi|355487095|gb|AES68298.1| Splicing factor U2af large
           subunit B [Medicago truncatula]
          Length = 626

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 26/42 (61%), Positives = 33/42 (78%)
 Frame = +3

Query: 3   PDQQMIEGLGKVFLEYSDTVGCTKAKAALGGRKFGGNTVIAI 128
           PD ++  G+GKVFLEY+D  G TKA++ L GRKFGGN VIA+
Sbjct: 571 PDGELCPGVGKVFLEYADVDGSTKARSGLNGRKFGGNQVIAV 612


>ref|XP_003589450.1| Splicing factor U2af large subunit B [Medicago truncatula]
           gi|355478498|gb|AES59701.1| Splicing factor U2af large
           subunit B [Medicago truncatula]
          Length = 611

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 26/42 (61%), Positives = 33/42 (78%)
 Frame = +3

Query: 3   PDQQMIEGLGKVFLEYSDTVGCTKAKAALGGRKFGGNTVIAI 128
           PD ++  G+GKVFLEY+D  G TKA++ L GRKFGGN VIA+
Sbjct: 556 PDGELCPGVGKVFLEYADVDGSTKARSGLNGRKFGGNQVIAV 597


>ref|XP_006663107.1| PREDICTED: splicing factor U2af large subunit B-like [Oryza
           brachyantha]
          Length = 567

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 26/42 (61%), Positives = 32/42 (76%)
 Frame = +3

Query: 3   PDQQMIEGLGKVFLEYSDTVGCTKAKAALGGRKFGGNTVIAI 128
           P  Q + G+GKVFLEY+D  G TKAK A+ GRKFGGN V+A+
Sbjct: 511 PSGQPVAGVGKVFLEYADVDGATKAKTAMHGRKFGGNPVVAV 552


>ref|XP_004499573.1| PREDICTED: splicing factor U2af large subunit B-like isoform X2
           [Cicer arietinum]
          Length = 621

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 26/42 (61%), Positives = 32/42 (76%)
 Frame = +3

Query: 3   PDQQMIEGLGKVFLEYSDTVGCTKAKAALGGRKFGGNTVIAI 128
           PD ++  G+GKVFLEY+D  G TKA+  L GRKFGGN VIA+
Sbjct: 566 PDGELCPGVGKVFLEYADVDGSTKARGGLNGRKFGGNQVIAV 607


>ref|XP_004499572.1| PREDICTED: splicing factor U2af large subunit B-like isoform X1
           [Cicer arietinum]
          Length = 623

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 26/42 (61%), Positives = 32/42 (76%)
 Frame = +3

Query: 3   PDQQMIEGLGKVFLEYSDTVGCTKAKAALGGRKFGGNTVIAI 128
           PD ++  G+GKVFLEY+D  G TKA+  L GRKFGGN VIA+
Sbjct: 568 PDGELCPGVGKVFLEYADVDGSTKARGGLNGRKFGGNQVIAV 609


>ref|XP_006827799.1| hypothetical protein AMTR_s00009p00267190 [Amborella trichopoda]
           gi|548832419|gb|ERM95215.1| hypothetical protein
           AMTR_s00009p00267190 [Amborella trichopoda]
          Length = 491

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 27/42 (64%), Positives = 30/42 (71%)
 Frame = +3

Query: 3   PDQQMIEGLGKVFLEYSDTVGCTKAKAALGGRKFGGNTVIAI 128
           PD Q   GLGKVFLEY D  G  +A+ AL GRKFGGN VIA+
Sbjct: 434 PDGQPTPGLGKVFLEYVDPAGAARARTALNGRKFGGNVVIAV 475


>ref|XP_002310209.2| hypothetical protein POPTR_0007s12550g [Populus trichocarpa]
           gi|550334732|gb|EEE90659.2| hypothetical protein
           POPTR_0007s12550g [Populus trichocarpa]
          Length = 565

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 25/42 (59%), Positives = 33/42 (78%)
 Frame = +3

Query: 3   PDQQMIEGLGKVFLEYSDTVGCTKAKAALGGRKFGGNTVIAI 128
           PD +   G+GKVFLEY+DT G +KA+A + GRKFGGN V+A+
Sbjct: 510 PDGENAPGVGKVFLEYADTEGSSKARAGMNGRKFGGNHVVAV 551


>gb|EMJ04963.1| hypothetical protein PRUPE_ppa003118mg [Prunus persica]
          Length = 601

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 25/42 (59%), Positives = 32/42 (76%)
 Frame = +3

Query: 3   PDQQMIEGLGKVFLEYSDTVGCTKAKAALGGRKFGGNTVIAI 128
           PD + + G+GKVFLEY+D  G TKA+  L GRKFGGN V+A+
Sbjct: 546 PDGEPLPGVGKVFLEYADVDGSTKARTGLNGRKFGGNQVVAV 587


>gb|EMT00217.1| Splicing factor U2af large subunit B [Aegilops tauschii]
          Length = 543

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 25/42 (59%), Positives = 32/42 (76%)
 Frame = +3

Query: 3   PDQQMIEGLGKVFLEYSDTVGCTKAKAALGGRKFGGNTVIAI 128
           P  + + G+GKVFLEY+D  G TKAK A+ GRKFGGN V+A+
Sbjct: 486 PSGEPVSGVGKVFLEYADVDGSTKAKTAMHGRKFGGNPVVAV 527


>gb|EMS55481.1| Splicing factor U2af large subunit B [Triticum urartu]
          Length = 598

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 25/42 (59%), Positives = 32/42 (76%)
 Frame = +3

Query: 3   PDQQMIEGLGKVFLEYSDTVGCTKAKAALGGRKFGGNTVIAI 128
           P  + + G+GKVFLEY+D  G TKAK A+ GRKFGGN V+A+
Sbjct: 541 PSGEPVSGVGKVFLEYADVDGSTKAKTAMHGRKFGGNPVVAV 582


>sp|Q2QKB4.1|U2A2B_WHEAT RecName: Full=Splicing factor U2af large subunit B; AltName:
           Full=U2 auxiliary factor 65 kDa subunit B; AltName:
           Full=U2 small nuclear ribonucleoprotein auxiliary factor
           large subunit B; Short=U2 snRNP auxiliary factor large
           subunit B gi|68036764|gb|AAY84880.1| U2AF large subunit
           [Triticum aestivum]
          Length = 543

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 25/42 (59%), Positives = 32/42 (76%)
 Frame = +3

Query: 3   PDQQMIEGLGKVFLEYSDTVGCTKAKAALGGRKFGGNTVIAI 128
           P  + + G+GKVFLEY+D  G TKAK A+ GRKFGGN V+A+
Sbjct: 486 PSGEPVSGVGKVFLEYADVDGSTKAKTAMHGRKFGGNPVVAV 527


>ref|XP_003635431.1| PREDICTED: splicing factor U2af large subunit B-like, partial
           [Vitis vinifera]
          Length = 238

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 26/42 (61%), Positives = 32/42 (76%)
 Frame = +3

Query: 3   PDQQMIEGLGKVFLEYSDTVGCTKAKAALGGRKFGGNTVIAI 128
           P+  +I G+GKVFLEYSDT G + A+ AL GRKFGGN V A+
Sbjct: 183 PNGDLIPGVGKVFLEYSDTAGSSSARNALSGRKFGGNVVSAV 224


>ref|XP_002267854.2| PREDICTED: splicing factor U2af large subunit B-like, partial
           [Vitis vinifera]
          Length = 410

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 26/42 (61%), Positives = 32/42 (76%)
 Frame = +3

Query: 3   PDQQMIEGLGKVFLEYSDTVGCTKAKAALGGRKFGGNTVIAI 128
           P+  +I G+GKVFLEYSDT G + A+ AL GRKFGGN V A+
Sbjct: 355 PNGDLIPGVGKVFLEYSDTAGSSSARNALSGRKFGGNVVSAV 396


>emb|CBI35711.3| unnamed protein product [Vitis vinifera]
          Length = 116

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 26/42 (61%), Positives = 32/42 (76%)
 Frame = +3

Query: 3   PDQQMIEGLGKVFLEYSDTVGCTKAKAALGGRKFGGNTVIAI 128
           P+  +I G+GKVFLEYSDT G + A+ AL GRKFGGN V A+
Sbjct: 61  PNGDLIPGVGKVFLEYSDTAGSSSARNALSGRKFGGNVVSAV 102


>emb|CBI25913.3| unnamed protein product [Vitis vinifera]
          Length = 6467

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 26/42 (61%), Positives = 32/42 (76%)
 Frame = +3

Query: 3    PDQQMIEGLGKVFLEYSDTVGCTKAKAALGGRKFGGNTVIAI 128
            P+  +I G+GKVFLEYSDT G + A+ AL GRKFGGN V A+
Sbjct: 6412 PNGDLIPGVGKVFLEYSDTAGSSSARNALSGRKFGGNVVSAV 6453