BLASTX nr result
ID: Atropa21_contig00012843
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00012843
(1042 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006352543.1| PREDICTED: probable RNA polymerase II transc... 554 e-155
ref|XP_004248296.1| PREDICTED: probable RNA polymerase II transc... 552 e-155
gb|AGQ44775.1| general transcription factor [Camellia sinensis] 418 e-114
ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transc... 410 e-112
emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera] 370 e-100
ref|XP_006474796.1| PREDICTED: probable RNA polymerase II transc... 347 4e-93
ref|XP_006452718.1| hypothetical protein CICLE_v10007802mg [Citr... 347 6e-93
ref|XP_006452717.1| hypothetical protein CICLE_v10007802mg [Citr... 347 6e-93
ref|XP_006857637.1| hypothetical protein AMTR_s00061p00135540 [A... 338 3e-90
ref|XP_002310512.2| transcription factor-related family protein ... 330 6e-88
gb|EMJ24087.1| hypothetical protein PRUPE_ppa003591mg [Prunus pe... 330 6e-88
ref|XP_006307068.1| hypothetical protein CARUB_v10008654mg [Caps... 328 2e-87
ref|NP_175971.3| probable RNA polymerase II transcription factor... 322 2e-85
ref|XP_002894525.1| hypothetical protein ARALYDRAFT_892577 [Arab... 321 3e-85
ref|XP_002307021.1| transcription factor-related family protein ... 313 5e-83
gb|ESW16172.1| hypothetical protein PHAVU_007G134900g [Phaseolus... 308 2e-81
ref|XP_002530618.1| TFIIH basal transcription factor complex sub... 308 3e-81
ref|XP_006392607.1| hypothetical protein EUTSA_v10011333mg [Eutr... 307 4e-81
ref|XP_004142720.1| PREDICTED: probable RNA polymerase II transc... 307 5e-81
ref|XP_006589332.1| PREDICTED: probable RNA polymerase II transc... 304 3e-80
>ref|XP_006352543.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
1-1-like [Solanum tuberosum]
Length = 599
Score = 554 bits (1428), Expect = e-155
Identities = 281/298 (94%), Positives = 289/298 (96%), Gaps = 1/298 (0%)
Frame = +2
Query: 2 DHGLPQGETKEFLEPQYEPFKRSFSQYLNQHAAVVLRGRVIDVELGDTRSVAEAFTRTNQ 181
DHGLPQGETKE LEPQYEPFKRSFSQYLNQHAAVVLRGRVIDVELGDTRSVAEAFTRT Q
Sbjct: 302 DHGLPQGETKEILEPQYEPFKRSFSQYLNQHAAVVLRGRVIDVELGDTRSVAEAFTRTYQ 361
Query: 182 AELATEVSDENAYRERINKVSRVAEIEDLQGPRDPPVALLSIKDPRDYFDSQQANAIKAL 361
AE ATEVSDENAYRER+ KVSRVAEIEDLQGP+DPPVALLSIKDPRDYFDSQQANAIKAL
Sbjct: 362 AEQATEVSDENAYRERVKKVSRVAEIEDLQGPQDPPVALLSIKDPRDYFDSQQANAIKAL 421
Query: 362 GDTDTGIRQLKFSVTKEDAFCSLKDSISEINSQGLIEPIISPEVALKVFNGLSQNISSTK 541
GD +TGIRQLKFSV+KE+AFCSLKDSISEINSQGLIEPIISPEVALKVFNGLSQNISSTK
Sbjct: 422 GDAETGIRQLKFSVSKEEAFCSLKDSISEINSQGLIEPIISPEVALKVFNGLSQNISSTK 481
Query: 542 YHLGKNPHESVLDQLPSATKNELLLHWTSIQELLKHFWSSYPITTKYFYTKVTRLKDAMS 721
Y+LGKNPHESVLDQLPSATKNELLLHWTSIQELLKHFWSSYPITTKYFY KVTRLKDAMS
Sbjct: 482 YYLGKNPHESVLDQLPSATKNELLLHWTSIQELLKHFWSSYPITTKYFYAKVTRLKDAMS 541
Query: 722 QIYPKLQEIKESVQSDIRHQVSLLVQPMLQALDAAFAHYDADVQKRSAKR-ERSNGFV 892
QIYPKLQEIKESVQSD+RHQVSLLVQPMLQALDAAFAHYDAD+QKRSAK ER NGFV
Sbjct: 542 QIYPKLQEIKESVQSDVRHQVSLLVQPMLQALDAAFAHYDADIQKRSAKSGERPNGFV 599
>ref|XP_004248296.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
1-1-like [Solanum lycopersicum]
Length = 599
Score = 552 bits (1422), Expect = e-155
Identities = 280/298 (93%), Positives = 288/298 (96%), Gaps = 1/298 (0%)
Frame = +2
Query: 2 DHGLPQGETKEFLEPQYEPFKRSFSQYLNQHAAVVLRGRVIDVELGDTRSVAEAFTRTNQ 181
DHGLPQGETKE LEPQYEPFKRSFSQYLNQHAAVVL+GRVIDVELGDTRSVAEAFTRTNQ
Sbjct: 302 DHGLPQGETKEILEPQYEPFKRSFSQYLNQHAAVVLQGRVIDVELGDTRSVAEAFTRTNQ 361
Query: 182 AELATEVSDENAYRERINKVSRVAEIEDLQGPRDPPVALLSIKDPRDYFDSQQANAIKAL 361
AE ATEVSDENAYRER+ KVSRVAEIEDLQGPRDPPVALLSIKDPRDYFDSQQANAIKAL
Sbjct: 362 AEQATEVSDENAYRERVKKVSRVAEIEDLQGPRDPPVALLSIKDPRDYFDSQQANAIKAL 421
Query: 362 GDTDTGIRQLKFSVTKEDAFCSLKDSISEINSQGLIEPIISPEVALKVFNGLSQNISSTK 541
GD +TGIRQLKF V+KE+AFCSLKDSISEINSQGLIEPIISPEVALKVFN LSQNISSTK
Sbjct: 422 GDAETGIRQLKFRVSKEEAFCSLKDSISEINSQGLIEPIISPEVALKVFNLLSQNISSTK 481
Query: 542 YHLGKNPHESVLDQLPSATKNELLLHWTSIQELLKHFWSSYPITTKYFYTKVTRLKDAMS 721
YHLGKNPHESVLDQLPSATKNELLLHWTSIQELLKHFWSSYPITTKYFY KVTRLKDAMS
Sbjct: 482 YHLGKNPHESVLDQLPSATKNELLLHWTSIQELLKHFWSSYPITTKYFYAKVTRLKDAMS 541
Query: 722 QIYPKLQEIKESVQSDIRHQVSLLVQPMLQALDAAFAHYDADVQKRSAKR-ERSNGFV 892
QIYPKLQEIKESVQSD+RHQVSLLVQPMLQALDAAFAHYDAD+QKRSA+ ER NGFV
Sbjct: 542 QIYPKLQEIKESVQSDVRHQVSLLVQPMLQALDAAFAHYDADLQKRSARSGERPNGFV 599
>gb|AGQ44775.1| general transcription factor [Camellia sinensis]
Length = 340
Score = 418 bits (1074), Expect = e-114
Identities = 210/298 (70%), Positives = 248/298 (83%), Gaps = 1/298 (0%)
Frame = +2
Query: 2 DHGLPQGETKEFLEPQYEPFKRSFSQYLNQHAAVVLRGRVIDVELGDTRSVAEAFTRTNQ 181
DHGL + ++K+ ++ YE ++RS SQ LN+H AVVL GR IDVELGDTRSVAEA R+ Q
Sbjct: 43 DHGLSRDDSKDAIDSPYEEYRRSLSQVLNRHGAVVLEGRSIDVELGDTRSVAEALARSKQ 102
Query: 182 AELATEVSDENAYRERINKVSRVAEIEDLQGPRDPPVALLSIKDPRDYFDSQQANAIKAL 361
ELA E SD NA +ER++++S++AEIEDLQ PRDPP+A L IKDPRDYFDS QANA+K L
Sbjct: 103 VELANEASDGNANQERLDRISQLAEIEDLQPPRDPPLAPLFIKDPRDYFDSHQANALKTL 162
Query: 362 GDTDTGIRQLKFSVTKEDAFCSLKDSISEINSQGLIEPIISPEVALKVFNGLSQNISSTK 541
GDT RQ+K +++ +A+ SL++ ISEI GL +PI+ PE+A KVFNGL+QNISSTK
Sbjct: 163 GDTLVETRQMKCNLSTSEAYGSLRECISEIKIAGLSDPIVKPEIAFKVFNGLTQNISSTK 222
Query: 542 YHLGKNPHESVLDQLPSATKNELLLHWTSIQELLKHFWSSYPITTKYFYTKVTRLKDAMS 721
YHLGKNP ESVLD+LP+ TK+ELL HWTSIQELLKHFWSSYPITT Y Y KV RLKDAMS
Sbjct: 223 YHLGKNPQESVLDRLPNITKDELLHHWTSIQELLKHFWSSYPITTSYLYVKVGRLKDAMS 282
Query: 722 QIYPKLQEIKESVQSDIRHQVSLLVQPMLQALDAAFAHYDADVQKRSAK-RERSNGFV 892
QIYPKLQEIKESVQSD RHQVSLLVQPMLQALDAAFA YDAD+QKRSAK +R+NG+V
Sbjct: 283 QIYPKLQEIKESVQSDFRHQVSLLVQPMLQALDAAFARYDADLQKRSAKGGDRTNGYV 340
>ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
1-1 [Vitis vinifera] gi|296090002|emb|CBI39821.3| unnamed
protein product [Vitis vinifera]
Length = 602
Score = 410 bits (1054), Expect = e-112
Identities = 207/298 (69%), Positives = 244/298 (81%), Gaps = 1/298 (0%)
Frame = +2
Query: 2 DHGLPQGETKEFLEPQYEPFKRSFSQYLNQHAAVVLRGRVIDVELGDTRSVAEAFTRTNQ 181
DHG+ + +KE ++PQYE ++R+ SQ LN+HAAVVL GR IDVEL DTR+VAEA ++ +
Sbjct: 305 DHGIFRDGSKEIIDPQYEQYRRTLSQDLNRHAAVVLEGRPIDVELEDTRTVAEALAKSKR 364
Query: 182 AELATEVSDENAYRERINKVSRVAEIEDLQGPRDPPVALLSIKDPRDYFDSQQANAIKAL 361
E A E SD + RER+ ++SR+ EIEDLQ PRD P A L IKDPRDYFDSQQANA+K L
Sbjct: 365 VEAANEKSDGSVTRERLERISRMTEIEDLQAPRDLPFAALCIKDPRDYFDSQQANALKTL 424
Query: 362 GDTDTGIRQLKFSVTKEDAFCSLKDSISEINSQGLIEPIISPEVALKVFNGLSQNISSTK 541
GDT G +Q+K S++ ++A+ SL+ ISEI S GL +PI+ P++ALKV NGL+QNISSTK
Sbjct: 425 GDTLAGSKQIKCSLSTQEAYGSLRGFISEIKSVGLSDPIVKPDIALKVLNGLTQNISSTK 484
Query: 542 YHLGKNPHESVLDQLPSATKNELLLHWTSIQELLKHFWSSYPITTKYFYTKVTRLKDAMS 721
+HLGKNP ESVLD+LP TK ELL HWTSIQELL+HFWSSYPITT Y YTK +RLKDAMS
Sbjct: 485 FHLGKNPQESVLDRLPIITKEELLHHWTSIQELLRHFWSSYPITTTYLYTKASRLKDAMS 544
Query: 722 QIYPKLQEIKESVQSDIRHQVSLLVQPMLQALDAAFAHYDADVQKRSAKR-ERSNGFV 892
QIYPKLQEIKESVQSD RHQVSLLVQPMLQALDAAFAHYDAD QKRSA+ ER NGFV
Sbjct: 545 QIYPKLQEIKESVQSDFRHQVSLLVQPMLQALDAAFAHYDADQQKRSARSGERPNGFV 602
>emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera]
Length = 735
Score = 370 bits (951), Expect = e-100
Identities = 184/270 (68%), Positives = 220/270 (81%)
Frame = +2
Query: 2 DHGLPQGETKEFLEPQYEPFKRSFSQYLNQHAAVVLRGRVIDVELGDTRSVAEAFTRTNQ 181
DHG+ + +KE ++PQYE ++R+ SQ LN+HAAVVL GR IDVEL DTR+VAEA ++ +
Sbjct: 348 DHGIFRDGSKEIIDPQYEQYRRTLSQDLNRHAAVVLEGRPIDVELEDTRTVAEALAKSKR 407
Query: 182 AELATEVSDENAYRERINKVSRVAEIEDLQGPRDPPVALLSIKDPRDYFDSQQANAIKAL 361
E A E SD + RER+ ++SR+ EIEDLQ PRD P A L IKDPRDYFDSQQANA+K L
Sbjct: 408 VEAANEKSDGSVTRERLERISRMTEIEDLQAPRDLPFAALCIKDPRDYFDSQQANALKTL 467
Query: 362 GDTDTGIRQLKFSVTKEDAFCSLKDSISEINSQGLIEPIISPEVALKVFNGLSQNISSTK 541
GDT G +Q+K S++ ++A+ SL+ ISEI S GL +PI+ P++ALKV NGL+QNISSTK
Sbjct: 468 GDTLAGSKQIKCSLSSQEAYGSLRGFISEIKSVGLSDPIVKPDIALKVLNGLTQNISSTK 527
Query: 542 YHLGKNPHESVLDQLPSATKNELLLHWTSIQELLKHFWSSYPITTKYFYTKVTRLKDAMS 721
+HLGKNP ESVLD+LP TK ELL HWTSIQELL+HFWSSYPITT Y YTK +RLKDAMS
Sbjct: 528 FHLGKNPQESVLDRLPIITKEELLHHWTSIQELLRHFWSSYPITTTYLYTKASRLKDAMS 587
Query: 722 QIYPKLQEIKESVQSDIRHQVSLLVQPMLQ 811
QIYPKLQEIKESVQSD RHQVSLLVQPMLQ
Sbjct: 588 QIYPKLQEIKESVQSDFRHQVSLLVQPMLQ 617
>ref|XP_006474796.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
1-1-like [Citrus sinensis]
Length = 597
Score = 347 bits (890), Expect = 4e-93
Identities = 182/299 (60%), Positives = 230/299 (76%), Gaps = 2/299 (0%)
Frame = +2
Query: 2 DHGLPQGETKEFLEPQYEPFKRSFSQYLNQHAAVVLRGRVIDVELGD-TRSVAEAFTRTN 178
DHG+ + TKE E Q E ++R+ Q LN+HAAVVL GR IDVE D TR++AEA R+
Sbjct: 305 DHGIFRDGTKESNELQSEHYRRTLLQDLNRHAAVVLEGRTIDVEREDSTRALAEALARSK 364
Query: 179 QAELATEVSDENAYRERINKVSRVAEIEDLQGPRDPPVALLSIKDPRDYFDSQQANAIKA 358
+ E +D NA ER+++ RVAEIEDLQ P P+A LSIKD R+YFDSQQAN +KA
Sbjct: 365 RGN---EGADNNANEERLDRTPRVAEIEDLQAPHCLPLAPLSIKDAREYFDSQQANTLKA 421
Query: 359 LGDTDTGIRQLKFSVTKEDAFCSLKDSISEINSQGLIEPIISPEVALKVFNGLSQNISST 538
D +K S++K++A+ S++D+ISEI GL +PI++PEVALKV++GL+ NISS
Sbjct: 422 SRDAQAS---MKCSLSKQEAYRSVRDAISEIKDMGLSDPIVNPEVALKVYSGLTHNISSI 478
Query: 539 KYHLGKNPHESVLDQLPSATKNELLLHWTSIQELLKHFWSSYPITTKYFYTKVTRLKDAM 718
KYHLGKNP E+VLD+LPSATK +LL HW SIQELLKHFWSSYPITT Y Y+KV RLKDA+
Sbjct: 479 KYHLGKNPRETVLDRLPSATKEKLLYHWMSIQELLKHFWSSYPITTPYLYSKVNRLKDAL 538
Query: 719 SQIYPKLQEIKESVQSDIRHQVSLLVQPMLQALDAAFAHYDADVQKRSAKR-ERSNGFV 892
S IYP+L+E+KES+ +D+RHQVSLLV+PM QALDAA HYDAD+QKRSAK E+ NG++
Sbjct: 539 SNIYPQLEEMKESLPADLRHQVSLLVRPMQQALDAAIQHYDADLQKRSAKSGEKPNGYI 597
>ref|XP_006452718.1| hypothetical protein CICLE_v10007802mg [Citrus clementina]
gi|557555944|gb|ESR65958.1| hypothetical protein
CICLE_v10007802mg [Citrus clementina]
Length = 564
Score = 347 bits (889), Expect = 6e-93
Identities = 182/299 (60%), Positives = 231/299 (77%), Gaps = 2/299 (0%)
Frame = +2
Query: 2 DHGLPQGETKEFLEPQYEPFKRSFSQYLNQHAAVVLRGRVIDVELGD-TRSVAEAFTRTN 178
DHG+ + TKE E Q E ++R+ Q LN+HAAVVL GR IDVE D TR++AEA R+
Sbjct: 272 DHGIFRDGTKESNELQSEHYRRTLLQDLNRHAAVVLEGRTIDVEREDSTRALAEALARSK 331
Query: 179 QAELATEVSDENAYRERINKVSRVAEIEDLQGPRDPPVALLSIKDPRDYFDSQQANAIKA 358
+ E +D NA ER+++ RVAEIEDLQ P P+A LSIKD R+YFDSQQAN +KA
Sbjct: 332 RGN---EGADNNANEERLDRTPRVAEIEDLQAPHCLPLAPLSIKDAREYFDSQQANTLKA 388
Query: 359 LGDTDTGIRQLKFSVTKEDAFCSLKDSISEINSQGLIEPIISPEVALKVFNGLSQNISST 538
D+ +K S+++++A+ S++D+ISEI GL +PI++PEVALKV++GL+ NISS
Sbjct: 389 SRDSQAS---MKCSLSRQEAYGSVRDAISEIKDMGLSDPIVNPEVALKVYSGLTHNISSI 445
Query: 539 KYHLGKNPHESVLDQLPSATKNELLLHWTSIQELLKHFWSSYPITTKYFYTKVTRLKDAM 718
KYHLGKNP E+VLD+LPSATK +LL HW SIQELLKHFWSSYPITT Y Y+KV RLKDA+
Sbjct: 446 KYHLGKNPRETVLDRLPSATKEKLLYHWMSIQELLKHFWSSYPITTPYLYSKVNRLKDAL 505
Query: 719 SQIYPKLQEIKESVQSDIRHQVSLLVQPMLQALDAAFAHYDADVQKRSAKR-ERSNGFV 892
S IYP+L+E+KES+ +D+RHQVSLLV+PM QALDAA HYDAD+QKRSAK E+ NG+V
Sbjct: 506 SNIYPQLEEMKESLPADLRHQVSLLVRPMQQALDAAIQHYDADLQKRSAKSGEKPNGYV 564
>ref|XP_006452717.1| hypothetical protein CICLE_v10007802mg [Citrus clementina]
gi|557555943|gb|ESR65957.1| hypothetical protein
CICLE_v10007802mg [Citrus clementina]
Length = 597
Score = 347 bits (889), Expect = 6e-93
Identities = 182/299 (60%), Positives = 231/299 (77%), Gaps = 2/299 (0%)
Frame = +2
Query: 2 DHGLPQGETKEFLEPQYEPFKRSFSQYLNQHAAVVLRGRVIDVELGD-TRSVAEAFTRTN 178
DHG+ + TKE E Q E ++R+ Q LN+HAAVVL GR IDVE D TR++AEA R+
Sbjct: 305 DHGIFRDGTKESNELQSEHYRRTLLQDLNRHAAVVLEGRTIDVEREDSTRALAEALARSK 364
Query: 179 QAELATEVSDENAYRERINKVSRVAEIEDLQGPRDPPVALLSIKDPRDYFDSQQANAIKA 358
+ E +D NA ER+++ RVAEIEDLQ P P+A LSIKD R+YFDSQQAN +KA
Sbjct: 365 RGN---EGADNNANEERLDRTPRVAEIEDLQAPHCLPLAPLSIKDAREYFDSQQANTLKA 421
Query: 359 LGDTDTGIRQLKFSVTKEDAFCSLKDSISEINSQGLIEPIISPEVALKVFNGLSQNISST 538
D+ +K S+++++A+ S++D+ISEI GL +PI++PEVALKV++GL+ NISS
Sbjct: 422 SRDSQAS---MKCSLSRQEAYGSVRDAISEIKDMGLSDPIVNPEVALKVYSGLTHNISSI 478
Query: 539 KYHLGKNPHESVLDQLPSATKNELLLHWTSIQELLKHFWSSYPITTKYFYTKVTRLKDAM 718
KYHLGKNP E+VLD+LPSATK +LL HW SIQELLKHFWSSYPITT Y Y+KV RLKDA+
Sbjct: 479 KYHLGKNPRETVLDRLPSATKEKLLYHWMSIQELLKHFWSSYPITTPYLYSKVNRLKDAL 538
Query: 719 SQIYPKLQEIKESVQSDIRHQVSLLVQPMLQALDAAFAHYDADVQKRSAKR-ERSNGFV 892
S IYP+L+E+KES+ +D+RHQVSLLV+PM QALDAA HYDAD+QKRSAK E+ NG+V
Sbjct: 539 SNIYPQLEEMKESLPADLRHQVSLLVRPMQQALDAAIQHYDADLQKRSAKSGEKPNGYV 597
>ref|XP_006857637.1| hypothetical protein AMTR_s00061p00135540 [Amborella trichopoda]
gi|548861733|gb|ERN19104.1| hypothetical protein
AMTR_s00061p00135540 [Amborella trichopoda]
Length = 626
Score = 338 bits (866), Expect = 3e-90
Identities = 177/321 (55%), Positives = 227/321 (70%)
Frame = +2
Query: 5 HGLPQGETKEFLEPQYEPFKRSFSQYLNQHAAVVLRGRVIDVELGDTRSVAEAFTRTNQA 184
HG+ + +KE ++ + E KR+ Q LN+HAAVVL GR +DVELGDTR+VAEA R+ QA
Sbjct: 310 HGILRDGSKESVDSESELPKRTLLQDLNRHAAVVLEGRTLDVELGDTRTVAEALARSKQA 369
Query: 185 ELATEVSDENAYRERINKVSRVAEIEDLQGPRDPPVALLSIKDPRDYFDSQQANAIKALG 364
E+ATE SDE ++R+ +VS++ EIEDLQ PR P A L IKDPR+YFDSQ+ANA KA G
Sbjct: 370 EVATETSDETENQKRLERVSQMTEIEDLQAPRSLPYAPLCIKDPREYFDSQRANAFKATG 429
Query: 365 DTDTGIRQLKFSVTKEDAFCSLKDSISEINSQGLIEPIISPEVALKVFNGLSQNISSTKY 544
DT +G+ + ++ + A+ SL+ I E+ S G +PI+ P++ALKV N ++Q +SST
Sbjct: 430 DTGSGVNKDCCHLSTKQAYESLRAQILEVKSVGFKDPIVIPDLALKVLNDVNQQLSSTDP 489
Query: 545 HLGKNPHESVLDQLPSATKNELLLHWTSIQELLKHFWSSYPITTKYFYTKVTRLKDAMSQ 724
LGKNP +VLD LP TK ELL HWTSIQELL+HFWSSYP+TT + + KV R+KDAM+Q
Sbjct: 490 QLGKNPQATVLDMLPHRTKEELLQHWTSIQELLRHFWSSYPLTTTFLHAKVNRVKDAMAQ 549
Query: 725 IYPKLQEIKESVQSDIRHQVSLLVQPMLQALDAAFAHYDADVQKRSAKRERSNGFV*AIL 904
IY KL E+KESVQS+ RHQVSLLV+PMLQ LD AF HYDA++QKRS K G +
Sbjct: 550 IYRKLPEVKESVQSEFRHQVSLLVKPMLQVLDEAFKHYDAEMQKRSTKTMSKVGMTGLGV 609
Query: 905 PHLLTQSLSPLFSGGYYTQMY 967
+ T GGYYT Y
Sbjct: 610 FYTRT--------GGYYTVKY 622
>ref|XP_002310512.2| transcription factor-related family protein [Populus trichocarpa]
gi|550334091|gb|EEE90962.2| transcription factor-related
family protein [Populus trichocarpa]
Length = 603
Score = 330 bits (846), Expect = 6e-88
Identities = 174/299 (58%), Positives = 230/299 (76%), Gaps = 3/299 (1%)
Frame = +2
Query: 2 DHGLPQGETKEFLEPQYEPFKRSFSQYLNQHAAVVLRGRVIDVE-LGDTRSVAEAFTRTN 178
DHG+ + +KE E Q+E + R+ SQ LN+HAAVVL+G ID E L DT++VAEA ++
Sbjct: 304 DHGIVRDGSKEITESQHELYIRTLSQELNRHAAVVLQGTPIDEEQLKDTQTVAEALKQSK 363
Query: 179 QAELAT-EVSDENAYRERINKVSRVAEIEDLQGPRDPPVALLSIKDPRDYFDSQQANAIK 355
Q + A+ E +D NA ++R++++S++ EI+DLQ D P+A LSIKDPRDYFDSQQA A+K
Sbjct: 364 QGQNASNEETDMNANQDRLSRISKMMEIDDLQASSDLPLAPLSIKDPRDYFDSQQATALK 423
Query: 356 ALGDTDTGIRQLKFSVTKEDAFCSLKDSISEINSQGLIEPIISPEVALKVFNGLSQNISS 535
DT G +K ++ E+++ SL+DSIS I + GL++PII PEVA+KV + L+ NISS
Sbjct: 424 NSRDTSIGTDPVKRILSAEESYASLRDSISLIKTTGLVDPIIKPEVAVKVLSVLTHNISS 483
Query: 536 TKYHLGKNPHESVLDQLPSATKNELLLHWTSIQELLKHFWSSYPITTKYFYTKVTRLKDA 715
TKY GKN SVLD LP+ K ELL HWTS+QELLKH+WSSYPITT Y YTKV+RLKDA
Sbjct: 484 TKYDTGKNHGLSVLDTLPNTIKEELLYHWTSLQELLKHYWSSYPITTTYLYTKVSRLKDA 543
Query: 716 MSQIYPKLQEIKESVQSDIRHQVSLLVQPMLQALDAAFAHYDADVQKRSAKR-ERSNGF 889
MS+I +LQE+KESVQSD+RHQV+LL++PM QAL+AA HYDA++QKRSA+ +RSNG+
Sbjct: 544 MSKIDSQLQELKESVQSDLRHQVTLLLRPMQQALEAAMQHYDAELQKRSARSGDRSNGY 602
>gb|EMJ24087.1| hypothetical protein PRUPE_ppa003591mg [Prunus persica]
Length = 563
Score = 330 bits (846), Expect = 6e-88
Identities = 175/297 (58%), Positives = 223/297 (75%), Gaps = 2/297 (0%)
Frame = +2
Query: 2 DHGLPQGETKEFLEPQYEPFKRSFSQYLNQHAAVVLRGRVIDVELGDTRSVAEAFTRTNQ 181
DHG+ + +K+ E Q E ++R+ SQ LN+ AVVL+GR +DV+L D R+VAEA ++ +
Sbjct: 274 DHGIFRDGSKDVTELQNELYRRTLSQDLNRQGAVVLQGRTVDVDLEDPRTVAEALMQSRR 333
Query: 182 AELATEVSDENAYRERINKVSRVAEIEDLQGPRDPPVALLSIKDPRDYFDSQQANAIKAL 361
SDE+A +ER+++++R+ EIEDLQ D PVA L IKDPRDYFD+QQ NA+K L
Sbjct: 334 E------SDESAEQERLDRITRMTEIEDLQEHHDHPVAQLCIKDPRDYFDTQQVNALKTL 387
Query: 362 GDTDTGIRQLKFSVTKEDAFCSLKDSISEINSQGLIEPIISPEVALKVFNGLSQNISSTK 541
D+ TG Q K S+T E+A+ SL+++IS+I S GL ++PE+A+ V NGL+QNISSTK
Sbjct: 388 DDSRTGTEQKKCSLTTEEAYGSLREAISKIKSIGLKNSTVAPEIAITVLNGLTQNISSTK 447
Query: 542 YHLGKNPHESVLDQLPSATKNELLLHWTSIQELLKHFWSSYPITTKYFYTKVTRLKDAMS 721
Y LGKNP +SVLD LP+ TK ELL HW SIQELL+HFWSSYPITT Y TKV RLKDAMS
Sbjct: 448 YQLGKNPQDSVLDSLPNKTKEELLHHWISIQELLRHFWSSYPITTTYLSTKVGRLKDAMS 507
Query: 722 QIYPKLQEIKESVQSDIRHQVSLLVQPMLQALDAAFAHYDADVQKRSAKR--ERSNG 886
QIY +L+EIK QSD RHQVSLLV+PM QALDAAF H+DAD+QKR+A+ E NG
Sbjct: 508 QIYRQLEEIK---QSDFRHQVSLLVRPMHQALDAAFQHFDADLQKRAARSGGETPNG 561
>ref|XP_006307068.1| hypothetical protein CARUB_v10008654mg [Capsella rubella]
gi|482575779|gb|EOA39966.1| hypothetical protein
CARUB_v10008654mg [Capsella rubella]
Length = 593
Score = 328 bits (842), Expect = 2e-87
Identities = 173/300 (57%), Positives = 225/300 (75%), Gaps = 3/300 (1%)
Frame = +2
Query: 2 DHGLPQGETKEFLEPQYEPFKRSFSQYLNQHAAVVLRGRVIDVELGDTRSVAEAFTRTNQ 181
DHG+ + T++ +EPQ E FKRS Q LN+HAAVVL GR IDV+ DTR VAEA TR Q
Sbjct: 300 DHGIQRDGTRDVVEPQNEQFKRSLLQDLNRHAAVVLEGRSIDVDSEDTRIVAEALTRVKQ 359
Query: 182 AELATEVSDENAYRERINKVSRVAEIEDLQGPRDPPVALLSIKDPRDYFDSQQANAIKAL 361
A + ++A +ER+ ++SRVA +EDLQ P++ P+A LSIKDPRDYF+SQQ N + A
Sbjct: 360 VSKADGETGKDANQERLERMSRVAGMEDLQAPQNFPLAPLSIKDPRDYFESQQGNVLNA- 418
Query: 362 GDTDTGIRQLKFSVTKEDAFCSLKDSISEINSQGLIEPIISPEVALKVFNGLSQNISSTK 541
G + LK +V +AF LK+SI EI ++GL +P+I PEV+ +VF+ L++ IS+ K
Sbjct: 419 ---PRGTKGLKRNV--HEAFGLLKESIVEIRARGLSDPLIKPEVSFEVFSSLTRTISTAK 473
Query: 542 YHLGKNPHESVLDQLPSATKNELLLHWTSIQELLKHFWSSYPITTKYFYTKVTRLKDAMS 721
+GKNP ES LD+LP +TK+E+L HWTSIQELL+HFWSSYPITT Y +TKV +LKDAMS
Sbjct: 474 NIIGKNPRESFLDRLPKSTKDEVLHHWTSIQELLRHFWSSYPITTTYLHTKVGKLKDAMS 533
Query: 722 QIYPKLQEIKESVQSDIRHQVSLLVQPMLQALDAAFAHYDADVQKRSAKR---ERSNGFV 892
Y KL+ +KESVQSD+RHQ+SLLV+PM QALDAAF HY+AD+Q+R+AK ER NG+V
Sbjct: 534 NTYSKLEAMKESVQSDLRHQISLLVRPMQQALDAAFQHYEADLQRRTAKSSGGERPNGYV 593
>ref|NP_175971.3| probable RNA polymerase II transcription factor B subunit 1-1
[Arabidopsis thaliana]
gi|122215373|sp|Q3ECP0.1|TFB1A_ARATH RecName:
Full=Probable RNA polymerase II transcription factor B
subunit 1-1; AltName: Full=General transcription and DNA
repair factor IIH subunit TFB1-1; Short=AtTFB1-1;
Short=TFIIH subunit TFB1-1 gi|110741140|dbj|BAE98663.1|
hypothetical protein [Arabidopsis thaliana]
gi|332195172|gb|AEE33293.1| probable RNA polymerase II
transcription factor B subunit 1-1 [Arabidopsis thaliana]
Length = 591
Score = 322 bits (824), Expect = 2e-85
Identities = 171/298 (57%), Positives = 221/298 (74%), Gaps = 1/298 (0%)
Frame = +2
Query: 2 DHGLPQGETKEFLEPQYEPFKRSFSQYLNQHAAVVLRGRVIDVELGDTRSVAEAFTRTNQ 181
DHG+ + T + +EPQ + FKRS Q LN+HAAVVL GR IDVE DTR VAEA TR Q
Sbjct: 300 DHGIQRDGTMDVVEPQNDQFKRSLLQDLNRHAAVVLEGRSIDVESEDTRIVAEALTRVKQ 359
Query: 182 AELATEVSDENAYRERINKVSRVAEIEDLQGPRDPPVALLSIKDPRDYFDSQQANAIKAL 361
A + ++A +ER+ ++SRVA +EDLQ P++ P+A LSIKDPRDYF+SQQ N +
Sbjct: 360 VSKADGETTKDANQERLERMSRVAGMEDLQAPQNFPLAPLSIKDPRDYFESQQGNVL--- 416
Query: 362 GDTDTGIRQLKFSVTKEDAFCSLKDSISEINSQGLIEPIISPEVALKVFNGLSQNISSTK 541
+ G + LK +V +A+ LK+SI EI + GL +P+I PEV+ +VF+ L++ I++ K
Sbjct: 417 -NVPRGAKGLKRNV--HEAYGLLKESILEIRATGLSDPLIKPEVSFEVFSSLTRTIATAK 473
Query: 542 YHLGKNPHESVLDQLPSATKNELLLHWTSIQELLKHFWSSYPITTKYFYTKVTRLKDAMS 721
GKNP ES LD+LP +TK+E+L HWTSIQELLKHFWSSYPITT Y +TKV +LKDAMS
Sbjct: 474 NINGKNPRESFLDRLPKSTKDEVLHHWTSIQELLKHFWSSYPITTTYLHTKVGKLKDAMS 533
Query: 722 QIYPKLQEIKESVQSDIRHQVSLLVQPMLQALDAAFAHYDADVQKRSAKR-ERSNGFV 892
Y KL+ +KESVQSD+RHQVSLLV+PM QALDAAF HY+ D+Q+R+AK ER NG+V
Sbjct: 534 NTYSKLEAMKESVQSDLRHQVSLLVRPMQQALDAAFHHYEVDLQRRTAKSGERPNGYV 591
>ref|XP_002894525.1| hypothetical protein ARALYDRAFT_892577 [Arabidopsis lyrata subsp.
lyrata] gi|297340367|gb|EFH70784.1| hypothetical protein
ARALYDRAFT_892577 [Arabidopsis lyrata subsp. lyrata]
Length = 592
Score = 321 bits (823), Expect = 3e-85
Identities = 170/299 (56%), Positives = 222/299 (74%), Gaps = 2/299 (0%)
Frame = +2
Query: 2 DHGLPQGETKEFLEPQYEPFKRSFSQYLNQHAAVVLRGRVIDVELGDTRSVAEAFTRTNQ 181
DHG+ + T + +EPQ + F+RS Q LN+HAAVVL GR IDVE DTR VAEA TR Q
Sbjct: 300 DHGIQRDGTMDVVEPQNDQFRRSLLQDLNRHAAVVLEGRSIDVESEDTRIVAEALTRVKQ 359
Query: 182 AELATEVSDENAYRERINKVSRVAEIEDLQGPRDPPVALLSIKDPRDYFDSQQANAIKAL 361
A + ++A ER+ ++SR+A +EDLQ P++ P+A LSIKDPRDYF+SQQ N +
Sbjct: 360 VSKADGETTKDANLERLERMSRLAGMEDLQAPQNFPLAPLSIKDPRDYFESQQGNVL--- 416
Query: 362 GDTDTGIRQLKFSVTKEDAFCSLKDSISEINSQGLIEPIISPEVALKVFNGLSQNISSTK 541
+ G + LK +V +A+ LK+SI EI + GL +P+I PEV+ +VF+ L++ IS+ K
Sbjct: 417 -NVPRGAKGLKRNV--HEAYGLLKESILEIRATGLSDPLIRPEVSFEVFSSLTRTISTAK 473
Query: 542 YHLGKNPHESVLDQLPSATKNELLLHWTSIQELLKHFWSSYPITTKYFYTKVTRLKDAMS 721
+GKNP ES LD+LP +TK+E+L HWTSIQELL+HFWSSYPITT Y +TKV +LKDAMS
Sbjct: 474 NIIGKNPRESFLDRLPKSTKDEVLHHWTSIQELLRHFWSSYPITTTYLHTKVGKLKDAMS 533
Query: 722 QIYPKLQEIKESVQSDIRHQVSLLVQPMLQALDAAFAHYDADVQKRSAKR--ERSNGFV 892
Y KL+ +KESVQSD+RHQVSLLV+PM QALDAAF HY+AD+Q+R+AK ER NG+V
Sbjct: 534 NTYSKLEAMKESVQSDLRHQVSLLVRPMQQALDAAFQHYEADLQRRTAKSGGERPNGYV 592
>ref|XP_002307021.1| transcription factor-related family protein [Populus trichocarpa]
gi|222856470|gb|EEE94017.1| transcription factor-related
family protein [Populus trichocarpa]
Length = 586
Score = 313 bits (803), Expect = 5e-83
Identities = 163/289 (56%), Positives = 219/289 (75%), Gaps = 1/289 (0%)
Frame = +2
Query: 2 DHGLPQGETKEFLEPQYEPFKRSFSQYLNQHAAVVLRGRVIDVE-LGDTRSVAEAFTRTN 178
DHG+ + +KE E Q+E +R+ SQ LN+HAAVVL+G ID E L DT++VAEA R+
Sbjct: 304 DHGIVRDGSKEITELQHELCRRTLSQDLNRHAAVVLQGTPIDEEQLKDTQTVAEALERSK 363
Query: 179 QAELATEVSDENAYRERINKVSRVAEIEDLQGPRDPPVALLSIKDPRDYFDSQQANAIKA 358
Q +D NA ++R+++ ++ EI+DLQ D P+A LSIKDPRDYFDSQQA+A+K
Sbjct: 364 QE------ADINANQDRLSRNLKMMEIDDLQASIDLPLAPLSIKDPRDYFDSQQASALKT 417
Query: 359 LGDTDTGIRQLKFSVTKEDAFCSLKDSISEINSQGLIEPIISPEVALKVFNGLSQNISST 538
DT G ++ +++ E+++ SL+DSIS I + GL++P+++PEVA KV L+ NISST
Sbjct: 418 SRDTSIGNDPVRCTLSVEESYASLRDSISHIKNTGLVDPMVTPEVAAKVLLVLTHNISST 477
Query: 539 KYHLGKNPHESVLDQLPSATKNELLLHWTSIQELLKHFWSSYPITTKYFYTKVTRLKDAM 718
KY LGKNP SVLD LP++ K EL+ HWTS+QELL+H+WSSYPITT Y Y KV+RLKDAM
Sbjct: 478 KYDLGKNPGLSVLDTLPNSIKEELMYHWTSLQELLRHYWSSYPITTMYLYNKVSRLKDAM 537
Query: 719 SQIYPKLQEIKESVQSDIRHQVSLLVQPMLQALDAAFAHYDADVQKRSA 865
S+I +LQE+KESVQSD+RHQV+LL++PM QAL+ A HYDAD+QKRS+
Sbjct: 538 SKIDSQLQELKESVQSDLRHQVTLLIRPMQQALEVAMQHYDADMQKRSS 586
>gb|ESW16172.1| hypothetical protein PHAVU_007G134900g [Phaseolus vulgaris]
Length = 588
Score = 308 bits (790), Expect = 2e-81
Identities = 162/297 (54%), Positives = 211/297 (71%)
Frame = +2
Query: 2 DHGLPQGETKEFLEPQYEPFKRSFSQYLNQHAAVVLRGRVIDVELGDTRSVAEAFTRTNQ 181
DHG+ + +KE E Q +KR+ Q LN+ AVVL G+ +D+E+ + R+VAE R Q
Sbjct: 297 DHGIFRDGSKEISEAQNSLYKRTLLQDLNRQGAVVLEGKTLDMEMENPRTVAEILARRKQ 356
Query: 182 AELATEVSDENAYRERINKVSRVAEIEDLQGPRDPPVALLSIKDPRDYFDSQQANAIKAL 361
E V DE ER N++S++ IEDLQ D A L IKDPRDYFD QQANA+K L
Sbjct: 357 -ESDEVVGDE----ERRNRISKMTPIEDLQSQDDHRYAPLCIKDPRDYFDFQQANAVKTL 411
Query: 362 GDTDTGIRQLKFSVTKEDAFCSLKDSISEINSQGLIEPIISPEVALKVFNGLSQNISSTK 541
D+ G+ Q+ S+ E+A+ SL+ SIS+I + GL +P+ SPEVALKV +GL++NISS+K
Sbjct: 412 DDSQPGMEQMMCSLGSEEAYGSLRASISKIQTTGLRDPLFSPEVALKVLHGLTKNISSSK 471
Query: 542 YHLGKNPHESVLDQLPSATKNELLLHWTSIQELLKHFWSSYPITTKYFYTKVTRLKDAMS 721
YHLGK ESVLD LP+ TK +LL HW QELL+H+WSSYP+TT+ K RLKD++S
Sbjct: 472 YHLGKTSQESVLDILPNTTKEKLLDHWVCSQELLRHYWSSYPVTTQNLVNKTRRLKDSIS 531
Query: 722 QIYPKLQEIKESVQSDIRHQVSLLVQPMLQALDAAFAHYDADVQKRSAKRERSNGFV 892
QIY KL+EIK S QSD+RHQVSL+V PM QALDAA HYDAD++KR+A+ +SNG+V
Sbjct: 532 QIYSKLEEIKVSAQSDLRHQVSLVVHPMQQALDAALLHYDADIRKRNARGSKSNGYV 588
>ref|XP_002530618.1| TFIIH basal transcription factor complex subunit, putative [Ricinus
communis] gi|223529828|gb|EEF31761.1| TFIIH basal
transcription factor complex subunit, putative [Ricinus
communis]
Length = 597
Score = 308 bits (788), Expect = 3e-81
Identities = 164/300 (54%), Positives = 219/300 (73%), Gaps = 4/300 (1%)
Frame = +2
Query: 2 DHGLPQGETKEFLEPQYEPFKRSFSQYLNQHAAVVLRGRVIDVE-LGDTRSVAEAFTRTN 178
DHG+ + +K+ +E Q+EP++R+ Q LN+HAAVVL G ID E L DT++VA+A R+
Sbjct: 300 DHGIVRDGSKDVIESQHEPYRRTLLQDLNRHAAVVLEGTAIDDEQLQDTKAVADALARSK 359
Query: 179 QA-ELATEVSDENAYRERINKVSRVAEIEDLQGPRDPPVALLSIKDPRDYFDSQQANAIK 355
+ + +D NA +ER N++S++ EIEDLQG D +A L IKDPRDYFDSQQA+A+K
Sbjct: 360 RGIKTINREADGNANQERSNRISQMMEIEDLQGSNDHHLAPLCIKDPRDYFDSQQASALK 419
Query: 356 ALGDTDTGIRQLKFSVTKEDAFCSLKDSISEINSQGLIEPIISPEVALKVFNGLSQNISS 535
D +G + S++ ++A+ SL+DSI++ + GL +PI+ PE+A KV + L+ NISS
Sbjct: 420 NSRDIPSGTEAARCSLSSQEAYASLRDSITQTKAMGLNDPIVKPEIATKVLSILTHNISS 479
Query: 536 TKYHLGKNPHESVLDQLPSATKNELLLHWTSIQELLKHFWSSYPITTKYFYTKVTRLKDA 715
TKYHLGKN ESVLD+LP+ K ELL HW SI+ELL+H+WSSYPITT Y Y KV+RLKDA
Sbjct: 480 TKYHLGKNSRESVLDRLPNTIKEELLHHWMSIEELLRHYWSSYPITTAYLYAKVSRLKDA 539
Query: 716 MSQIYPKLQEIKESVQSDIR-HQVSLLVQPMLQALDAAFAHYDADVQKRSAK-RERSNGF 889
MS+I +LQE+KESVQSD+ H SL + P AL+AA HYDAD+QKRSAK ER NG+
Sbjct: 540 MSKIDSQLQEMKESVQSDLXFHATSLGIVP---ALEAAMQHYDADLQKRSAKSAERPNGY 596
>ref|XP_006392607.1| hypothetical protein EUTSA_v10011333mg [Eutrema salsugineum]
gi|557089185|gb|ESQ29893.1| hypothetical protein
EUTSA_v10011333mg [Eutrema salsugineum]
Length = 597
Score = 307 bits (787), Expect = 4e-81
Identities = 165/303 (54%), Positives = 217/303 (71%), Gaps = 6/303 (1%)
Frame = +2
Query: 2 DHGLPQGETKEFLEPQYEPFKRSFSQYLNQHAAVVLRGRVIDVELGDTRSVAEAFTRTNQ 181
DHG+ + TK+ +E Q + F+RS Q LN+H+AVVL GR IDVE DTR VAEA TR Q
Sbjct: 301 DHGIQRDGTKDVVESQNDQFRRSLLQDLNRHSAVVLEGRSIDVESEDTRVVAEALTRAKQ 360
Query: 182 AELATEVSDENAYRERINKVSRVAEIEDLQGPRDPPVALLSIKDPRDYFDSQQANAIKAL 361
A + ++A ++R+ ++SR AE+EDLQ P++ P+A LSIKDPRDYF+SQQ N +
Sbjct: 361 VSKADGETTKDANQDRLERMSRTAEMEDLQAPQNFPLAPLSIKDPRDYFESQQGNVL--- 417
Query: 362 GDTDTGIRQLKFSVTKEDAFCSLKDSISEINSQGLIEPIISPEVALKVFNGLSQNISSTK 541
+ G L +V +A+ LK+SI EI ++GL P+I EV+ +VF+ L+Q IS+ K
Sbjct: 418 -NEPRGAGALNRNV--HEAYGLLKESILEIRTKGLSYPLIKSEVSFEVFSSLTQTISTAK 474
Query: 542 YHLGKNPHESVLDQLPSATKNELLLHWTSIQELLKHFWSSYPITTKYFYTKVTRLKDAMS 721
+GKNP ES LD+LP +TK+E+L HWTSIQELL+HFWSSYPITT Y +TKV +LKDAMS
Sbjct: 475 NIIGKNPRESFLDRLPKSTKDEVLHHWTSIQELLRHFWSSYPITTTYLHTKVGKLKDAMS 534
Query: 722 QIYPKLQEIKESVQSDIRHQVSLLVQPMLQALDAAFAHYDADVQKRSAK------RERSN 883
Y +L +K+SVQSD+RHQVSLLV+PM QALDAAF HY+ D+Q+R+AK ER N
Sbjct: 535 NTYSQLDAMKQSVQSDLRHQVSLLVRPMQQALDAAFQHYETDLQRRTAKSVGGSSSERPN 594
Query: 884 GFV 892
G V
Sbjct: 595 GGV 597
>ref|XP_004142720.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
1-1-like [Cucumis sativus]
Length = 729
Score = 307 bits (786), Expect = 5e-81
Identities = 159/256 (62%), Positives = 195/256 (76%), Gaps = 1/256 (0%)
Frame = +2
Query: 125 DVELGDTRSVAEAFTRTNQAELATEVSDENAYRERINKVSRVAEIEDLQGPRDPPVALLS 304
DV+L D R+VA+A R+ A + N + ++++SR+ IEDLQ P P A L
Sbjct: 479 DVDLEDPRTVADALVRSKHAV------EGNESQTALDRISRMTAIEDLQAPHSHPFAPLC 532
Query: 305 IKDPRDYFDSQQANAIKALGDTDTGIRQLKFSVTKEDAFCSLKDSISEINSQGLIEPIIS 484
IKDPRDYFD+QQANAIK L DT G++Q K S++ +A+ SL++SISEI S G PII
Sbjct: 533 IKDPRDYFDAQQANAIKTLDDTRAGMQQTKCSLSTTEAYGSLRESISEIKSSGFNHPIIK 592
Query: 485 PEVALKVFNGLSQNISSTKYHLGKNPHESVLDQLPSATKNELLLHWTSIQELLKHFWSSY 664
PEVAL V+NGL+QNISSTKY LGKNP ES+L+ LP+ TK ELL HW SIQELLKHFWSSY
Sbjct: 593 PEVALMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHHWISIQELLKHFWSSY 652
Query: 665 PITTKYFYTKVTRLKDAMSQIYPKLQEIKESVQSDIRHQVSLLVQPMLQALDAAFAHYDA 844
PITT Y YTKV+RLKDAM++IY +L+EIKE+V +D RHQVSLLV+PM QALDAAF H+DA
Sbjct: 653 PITTSYLYTKVSRLKDAMAKIYRQLEEIKETVVADFRHQVSLLVRPMHQALDAAFQHHDA 712
Query: 845 DVQKRSAKR-ERSNGF 889
D+QKRS K ER NG+
Sbjct: 713 DMQKRSVKSGERLNGY 728
>ref|XP_006589332.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
1-3-like isoform X1 [Glycine max]
gi|571483735|ref|XP_006589333.1| PREDICTED: probable RNA
polymerase II transcription factor B subunit 1-3-like
isoform X2 [Glycine max]
Length = 587
Score = 304 bits (779), Expect = 3e-80
Identities = 156/297 (52%), Positives = 214/297 (72%)
Frame = +2
Query: 2 DHGLPQGETKEFLEPQYEPFKRSFSQYLNQHAAVVLRGRVIDVELGDTRSVAEAFTRTNQ 181
DHG+ + +K+ E Q +KR+ Q LN+ AVVL G+ +D+E+ R+VAE R Q
Sbjct: 297 DHGIFRDGSKDISEAQNSLYKRTLLQDLNRQGAVVLEGKTLDMEMEHPRTVAEILARRKQ 356
Query: 182 AELATEVSDENAYRERINKVSRVAEIEDLQGPRDPPVALLSIKDPRDYFDSQQANAIKAL 361
V DE ER N++S++ IEDLQ + P A L IKDPRDYFDSQQANA+K L
Sbjct: 357 E--CDGVVDE----ERRNRISKMTPIEDLQAQDNHPYAPLCIKDPRDYFDSQQANAVKTL 410
Query: 362 GDTDTGIRQLKFSVTKEDAFCSLKDSISEINSQGLIEPIISPEVALKVFNGLSQNISSTK 541
D+ G+ Q+K S+ E+A+ SL+ SIS+I + GL +P+ SP+VALKV NGL++NI+STK
Sbjct: 411 DDSQAGMEQMKCSLGSEEAYDSLRASISKIKTTGLRDPLFSPDVALKVLNGLTKNITSTK 470
Query: 542 YHLGKNPHESVLDQLPSATKNELLLHWTSIQELLKHFWSSYPITTKYFYTKVTRLKDAMS 721
YHLGK+ ESVLD LP++TK +LL HW QELL+HFWSSYP++T+ +K RLKD++S
Sbjct: 471 YHLGKSSQESVLDILPNSTKEKLLDHWVCSQELLRHFWSSYPVSTQNLVSKTRRLKDSIS 530
Query: 722 QIYPKLQEIKESVQSDIRHQVSLLVQPMLQALDAAFAHYDADVQKRSAKRERSNGFV 892
QIY KL++IK S +SD+RH VSL+V PM QAL+AA HY+AD++KR+A+ ++ NG+V
Sbjct: 531 QIYSKLEDIKVSAESDLRHHVSLVVHPMQQALNAALLHYEADIRKRNARGQKPNGYV 587