BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00012734
         (830 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006357775.1| PREDICTED: double-stranded RNA-binding prote...   213   7e-53
ref|XP_004231990.1| PREDICTED: uncharacterized protein LOC101257...   201   3e-49
ref|XP_002272597.2| PREDICTED: double-stranded RNA-binding prote...    71   5e-10

>ref|XP_006357775.1| PREDICTED: double-stranded RNA-binding protein 4-like [Solanum
           tuberosum]
          Length = 355

 Score =  213 bits (542), Expect = 7e-53
 Identities = 116/162 (71%), Positives = 124/162 (76%), Gaps = 3/162 (1%)
 Frame = +2

Query: 2   SGSMMLEIIKSKRKLYAALDKVQDTGDSNACFLPIELGHPVHVDNKRKEVE---GPGEKT 172
           +G++M EIIKSKRKLYAALDKVQDTGD NA FLP+E G P+HVD KRKEVE   G GEK 
Sbjct: 203 AGTVMFEIIKSKRKLYAALDKVQDTGDVNAGFLPMEFGRPLHVD-KRKEVEISEGAGEKA 261

Query: 173 NTGLAAYSLGQPSDVQAPNQLHVFKRPNIGSSSVEVAPPIVFVPPVLDPSLLCSTSGPTF 352
           N+GL AYSLGQPSDVQAP+QLHVFKRP  GSS VEVAPPIVFVPPVLDPSLLCSTSG   
Sbjct: 262 NSGLLAYSLGQPSDVQAPDQLHVFKRPKSGSSIVEVAPPIVFVPPVLDPSLLCSTSG--- 318

Query: 353 LCSTSXXXXXXXXXXXXXVQVDPQVPAATLPLAQVPPCSMEQ 478
                             VQVDPQVPAATLPLAQ PPCS+ Q
Sbjct: 319 -----KKRRNKRKAKKKNVQVDPQVPAATLPLAQAPPCSVTQ 355


>ref|XP_004231990.1| PREDICTED: uncharacterized protein LOC101257125 [Solanum
           lycopersicum]
          Length = 403

 Score =  201 bits (510), Expect = 3e-49
 Identities = 111/164 (67%), Positives = 122/164 (74%), Gaps = 5/164 (3%)
 Frame = +2

Query: 2   SGSMMLEIIKSKRKLYAALDKVQDTGDSNACFLPIELGHPVHVDNKRKEVE---GPGEKT 172
           +G++M EII+SK KLYAALDKVQDTGD NA FLP+E G P+HV+ KRKE E   G GEK 
Sbjct: 249 AGTVMFEIIRSKGKLYAALDKVQDTGDVNAGFLPMEFGRPLHVE-KRKEAEISEGAGEKA 307

Query: 173 NTGLAAYSLGQPSDVQAPNQLHVFKRPNIGSSSVEVAPPIVFVPPVLDPSLLCSTSGPTF 352
           N+GL AYSLGQPSDVQAP QLH+FKRP  GSS+VEVAPPIVFVPPVLDPSLLCSTSG   
Sbjct: 308 NSGLLAYSLGQPSDVQAPGQLHLFKRPKSGSSTVEVAPPIVFVPPVLDPSLLCSTSG--- 364

Query: 353 LCSTSXXXXXXXXXXXXXVQVDPQVPAATLPL--AQVPPCSMEQ 478
                             VQVDPQVPAATLPL  AQ PPCS+ Q
Sbjct: 365 -----KKRRNKRKAKKKNVQVDPQVPAATLPLAQAQAPPCSVAQ 403


>ref|XP_002272597.2| PREDICTED: double-stranded RNA-binding protein 4-like [Vitis
           vinifera] gi|296087161|emb|CBI33535.3| unnamed protein
           product [Vitis vinifera]
          Length = 333

 Score = 70.9 bits (172), Expect = 5e-10
 Identities = 58/163 (35%), Positives = 80/163 (49%), Gaps = 4/163 (2%)
 Frame = +2

Query: 2   SGSMMLEIIKSKRKLYAALDKVQDTGDSNACFLPIELGHPVHVDNKRKEVE---GPGEKT 172
           SG+++ EIIKSK KLYAAL +V+D    +   LPI L   +    K KEVE   G  +  
Sbjct: 178 SGTLLSEIIKSKVKLYAALHRVKDPSYIHTGILPIGLTSGI-PPCKGKEVEVAPGTDQLL 236

Query: 173 NTGLAAYSLGQPSDVQAPN-QLHVFKRPNIGSSSVEVAPPIVFVPPVLDPSLLCSTSGPT 349
            T ++    GQ   V   +  +H  ++P    SS  +APPI FVP V +  L+ S   PT
Sbjct: 237 PTAVSVPLSGQLVHVPVTHPPVHELEKPKPNVSSEVIAPPISFVPSVFEQPLVVS---PT 293

Query: 350 FLCSTSXXXXXXXXXXXXXVQVDPQVPAATLPLAQVPPCSMEQ 478
              +               ++ D Q+P A LPL Q  PCS+ Q
Sbjct: 294 ---TGRKRNRKNKKKANKKLRTDAQLPVAVLPLNQASPCSVAQ 333