BLASTX nr result

ID: Atropa21_contig00012500 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00012500
         (1018 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006355227.1| PREDICTED: serine/arginine repetitive matrix...   137   9e-30
ref|XP_006355228.1| PREDICTED: serine/arginine repetitive matrix...   117   9e-24
ref|XP_004246069.1| PREDICTED: uncharacterized protein LOC101245...   102   3e-19
ref|XP_006355229.1| PREDICTED: serine/arginine repetitive matrix...    92   3e-16

>ref|XP_006355227.1| PREDICTED: serine/arginine repetitive matrix protein 2-like isoform
           X1 [Solanum tuberosum]
          Length = 599

 Score =  137 bits (344), Expect = 9e-30
 Identities = 77/146 (52%), Positives = 86/146 (58%)
 Frame = +2

Query: 2   RRSEGDNDGRDSKTGKFQXXXXXXXXXXXXKNDRDVKNKMIQKEKRHVIEGKYDDGHDAK 181
           R   GD+DGRD+KT K Q             NDRDVKNK IQKEKRHV E KYDDG DAK
Sbjct: 263 RHFVGDDDGRDAKTIKLQQGRRHDSDEDDHVNDRDVKNKTIQKEKRHVAEDKYDDGRDAK 322

Query: 182 NKKSQRGKRHNXXXXXXXXXXXXXXXXIQEGRRRVTEGEYDDDRDAKNKKSQRGRRHNXX 361
           NK SQRG+RH+                IQ+ +R V E +YDD RDAKNKKSQ  R+H   
Sbjct: 323 NKTSQRGRRHDSDEDDHDNDRDVINKMIQKEKRHVAEDKYDDGRDAKNKKSQ--RKHYSD 380

Query: 362 XXXXXXXXVKSRKIQERRRHITKAEY 439
                   VK RKIQE RRH +KAEY
Sbjct: 381 DDGGGDPDVKIRKIQEGRRHNSKAEY 406



 Score = 92.0 bits (227), Expect = 3e-16
 Identities = 77/252 (30%), Positives = 106/252 (42%), Gaps = 17/252 (6%)
 Frame = +2

Query: 302  DDDRDAKNKKSQRGRRHNXXXXXXXXXX-VKSRKIQERRRHITKAEYDVGRDAKNKKSQX 478
            DD RDAK  K Q+GRRH+           VK++ IQ+ +RH+ + +YD GRDAKNK SQ 
Sbjct: 269  DDGRDAKTIKLQQGRRHDSDEDDHVNDRDVKNKTIQKEKRHVAEDKYDDGRDAKNKTSQR 328

Query: 479  XXXXXXXXXXXXXXXXVKSRKIQEGRRHVTEGECDDGRDAKNKKSQRGXXXXXXXXXXXX 658
                            V ++ IQ+ +RHV E + DDGRDAKNKKSQR             
Sbjct: 329  GRRHDSDEDDHDNDRDVINKMIQKEKRHVAEDKYDDGRDAKNKKSQR---KHYSDDDGGG 385

Query: 659  XXXXXXXXIQKDRRYGSDDREYDEGYTA---------------XXXXXXXXXRSDSDKDE 793
                    IQ+ RR+ S      +G +A                        R DS KDE
Sbjct: 386  DPDVKIRKIQEGRRHNSKAEYVIDGSSASQELLRGKRKLDDESLDQREGKSRRRDSSKDE 445

Query: 794  GEIXXXXXXXXXXXXXXERSYHRRKGVDRTKSEKINTS-GRRDDSGGMWESSVTKERAFQ 970
              +               RSY  R   DR+K ++   S G  + + G  E+ +      Q
Sbjct: 446  KYL-----RADTEAENPNRSY--RSTEDRSKDQQTRRSGGEYEGNDGERENKIQSGNELQ 498

Query: 971  EEDLKKTEDAQV 1006
             E  ++  D +V
Sbjct: 499  RESQRENRDYEV 510



 Score = 82.8 bits (203), Expect = 2e-13
 Identities = 55/139 (39%), Positives = 69/139 (49%)
 Frame = +2

Query: 20  NDGRDSKTGKFQXXXXXXXXXXXXKNDRDVKNKMIQKEKRHVIEGKYDDGHDAKNKKSQR 199
           +DGRD+K    Q             NDRDV NKMIQKEKRHV E KYDDG DAKNKKSQR
Sbjct: 316 DDGRDAKNKTSQRGRRHDSDEDDHDNDRDVINKMIQKEKRHVAEDKYDDGRDAKNKKSQR 375

Query: 200 GKRHNXXXXXXXXXXXXXXXXIQEGRRRVTEGEYDDDRDAKNKKSQRGRRHNXXXXXXXX 379
               +                IQEGRR  ++ EY  D  + +++  RG+R          
Sbjct: 376 ---KHYSDDDGGGDPDVKIRKIQEGRRHNSKAEYVIDGSSASQELLRGKR------KLDD 426

Query: 380 XXVKSRKIQERRRHITKAE 436
             +  R+ + RRR  +K E
Sbjct: 427 ESLDQREGKSRRRDSSKDE 445



 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 44/132 (33%), Positives = 61/132 (46%)
 Frame = +2

Query: 389 KSRKIQERRRHITKAEYDVGRDAKNKKSQXXXXXXXXXXXXXXXXXVKSRKIQEGRRHVT 568
           + ++++  RRH      D GRDAK  K Q                 VK++ IQ+ +RHV 
Sbjct: 254 EKKQVKVHRRHFVGD--DDGRDAKTIKLQQGRRHDSDEDDHVNDRDVKNKTIQKEKRHVA 311

Query: 569 EGECDDGRDAKNKKSQRGXXXXXXXXXXXXXXXXXXXXIQKDRRYGSDDREYDEGYTAXX 748
           E + DDGRDAKNK SQRG                    IQK++R+ ++D+ YD+G  A  
Sbjct: 312 EDKYDDGRDAKNKTSQRGRRHDSDEDDHDNDRDVINKMIQKEKRHVAEDK-YDDGRDAKN 370

Query: 749 XXXXXXXRSDSD 784
                   SD D
Sbjct: 371 KKSQRKHYSDDD 382


>ref|XP_006355228.1| PREDICTED: serine/arginine repetitive matrix protein 2-like isoform
           X2 [Solanum tuberosum]
          Length = 574

 Score =  117 bits (292), Expect = 9e-24
 Identities = 71/146 (48%), Positives = 78/146 (53%)
 Frame = +2

Query: 2   RRSEGDNDGRDSKTGKFQXXXXXXXXXXXXKNDRDVKNKMIQKEKRHVIEGKYDDGHDAK 181
           R   GD+DGRD+KT K Q             NDRDVKNK IQKEKRHV E KYDDG DAK
Sbjct: 263 RHFVGDDDGRDAKTIKLQQGRRHDSDEDDHVNDRDVKNKTIQKEKRHVAEDKYDDGRDAK 322

Query: 182 NKKSQRGKRHNXXXXXXXXXXXXXXXXIQEGRRRVTEGEYDDDRDAKNKKSQRGRRHNXX 361
           NK SQRG+RH+                           + DD RDAKNKKSQ  R+H   
Sbjct: 323 NKTSQRGRRHD-------------------------SDDNDDGRDAKNKKSQ--RKHYSD 355

Query: 362 XXXXXXXXVKSRKIQERRRHITKAEY 439
                   VK RKIQE RRH +KAEY
Sbjct: 356 DDGGGDPDVKIRKIQEGRRHNSKAEY 381



 Score = 76.6 bits (187), Expect = 1e-11
 Identities = 74/252 (29%), Positives = 101/252 (40%), Gaps = 17/252 (6%)
 Frame = +2

Query: 302  DDDRDAKNKKSQRGRRHNXXXXXXXXXX-VKSRKIQERRRHITKAEYDVGRDAKNKKSQX 478
            DD RDAK  K Q+GRRH+           VK++ IQ+ +RH+ + +YD GRDAKNK S  
Sbjct: 269  DDGRDAKTIKLQQGRRHDSDEDDHVNDRDVKNKTIQKEKRHVAEDKYDDGRDAKNKTS-- 326

Query: 479  XXXXXXXXXXXXXXXXVKSRKIQEGRRHVTEGECDDGRDAKNKKSQRGXXXXXXXXXXXX 658
                                  Q GRRH ++ + DDGRDAKNKKSQR             
Sbjct: 327  ----------------------QRGRRHDSD-DNDDGRDAKNKKSQR---KHYSDDDGGG 360

Query: 659  XXXXXXXXIQKDRRYGSDDREYDEGYTA---------------XXXXXXXXXRSDSDKDE 793
                    IQ+ RR+ S      +G +A                        R DS KDE
Sbjct: 361  DPDVKIRKIQEGRRHNSKAEYVIDGSSASQELLRGKRKLDDESLDQREGKSRRRDSSKDE 420

Query: 794  GEIXXXXXXXXXXXXXXERSYHRRKGVDRTKSEKINTS-GRRDDSGGMWESSVTKERAFQ 970
              +               RSY  R   DR+K ++   S G  + + G  E+ +      Q
Sbjct: 421  KYL-----RADTEAENPNRSY--RSTEDRSKDQQTRRSGGEYEGNDGERENKIQSGNELQ 473

Query: 971  EEDLKKTEDAQV 1006
             E  ++  D +V
Sbjct: 474  RESQRENRDYEV 485


>ref|XP_004246069.1| PREDICTED: uncharacterized protein LOC101245685 [Solanum
           lycopersicum]
          Length = 639

 Score =  102 bits (253), Expect = 3e-19
 Identities = 84/241 (34%), Positives = 97/241 (40%), Gaps = 1/241 (0%)
 Frame = +2

Query: 2   RRSEGDNDGRDSKTGKFQXXXXXXXXXXXXKNDRDVKNKMIQKEKRHVIEGKYDDGHDAK 181
           R   GDND RD KT K Q             ND DVKNKM+QKEK HV   KYDDGHDAK
Sbjct: 314 RHFVGDNDDRDVKTIKLQQGRRHDSDDDNHYNDLDVKNKMVQKEKTHV--DKYDDGHDAK 371

Query: 182 NKKSQRGKRHNXXXXXXXXXXXXXXXXIQEGRRRVTEGEYDDDRDAKNKKSQRGRRHNXX 361
           NK S RG+RH+                           + DD  D KNKKSQR RRH+  
Sbjct: 372 NKTSHRGRRHD-------------------------SDDNDDGLDFKNKKSQRVRRHDSD 406

Query: 362 XXXXXXXXVKSRKIQERRRHITKAEY-DVGRDAKNKKSQXXXXXXXXXXXXXXXXXVKSR 538
                   V        RRH   ++Y D GRDAKNK                        
Sbjct: 407 DDSDGSDRV--------RRH--DSDYNDDGRDAKNK------------------------ 432

Query: 539 KIQEGRRHVTEGECDDGRDAKNKKSQRGXXXXXXXXXXXXXXXXXXXXIQKDRRYGSDDR 718
           KIQEGRRH T+        + +++  RG                      KD +YG  D 
Sbjct: 433 KIQEGRRHNTKATYLIDGSSASQELLRGKRKLNDESPDQREGKSRRRDSSKDEKYGRADT 492

Query: 719 E 721
           E
Sbjct: 493 E 493


>ref|XP_006355229.1| PREDICTED: serine/arginine repetitive matrix protein 2-like isoform
           X3 [Solanum tuberosum]
          Length = 552

 Score = 92.0 bits (227), Expect = 3e-16
 Identities = 60/145 (41%), Positives = 74/145 (51%)
 Frame = +2

Query: 2   RRSEGDNDGRDSKTGKFQXXXXXXXXXXXXKNDRDVKNKMIQKEKRHVIEGKYDDGHDAK 181
           R   GD+DGRD+KT K Q             NDRDV NKMIQKEKRHV E KYDDG DAK
Sbjct: 263 RHFVGDDDGRDAKTIKLQQGRRHDSDEDDHDNDRDVINKMIQKEKRHVAEDKYDDGRDAK 322

Query: 182 NKKSQRGKRHNXXXXXXXXXXXXXXXXIQEGRRRVTEGEYDDDRDAKNKKSQRGRRHNXX 361
           NKKSQ   R +                IQEGRR  ++ EY  D  + +++  RG+R    
Sbjct: 323 NKKSQ---RKHYSDDDGGGDPDVKIRKIQEGRRHNSKAEYVIDGSSASQELLRGKR---- 375

Query: 362 XXXXXXXXVKSRKIQERRRHITKAE 436
                   +  R+ + RRR  +K E
Sbjct: 376 --KLDDESLDQREGKSRRRDSSKDE 398



 Score = 83.2 bits (204), Expect = 2e-13
 Identities = 53/146 (36%), Positives = 71/146 (48%)
 Frame = +2

Query: 2   RRSEGDNDGRDSKTGKFQXXXXXXXXXXXXKNDRDVKNKMIQKEKRHVIEGKYDDGHDAK 181
           RR   D+   DS +  +              ++ D + K ++  +RH +    DDG DAK
Sbjct: 232 RRHHSDDSSSDSDSDSY--------------SESDHEKKQVKVHRRHFVGD--DDGRDAK 275

Query: 182 NKKSQRGKRHNXXXXXXXXXXXXXXXXIQEGRRRVTEGEYDDDRDAKNKKSQRGRRHNXX 361
             K Q+G+RH+                IQ+ +R V E +YDD RDAKNKKSQR  +H   
Sbjct: 276 TIKLQQGRRHDSDEDDHDNDRDVINKMIQKEKRHVAEDKYDDGRDAKNKKSQR--KHYSD 333

Query: 362 XXXXXXXXVKSRKIQERRRHITKAEY 439
                   VK RKIQE RRH +KAEY
Sbjct: 334 DDGGGDPDVKIRKIQEGRRHNSKAEY 359



 Score = 69.7 bits (169), Expect = 2e-09
 Identities = 68/238 (28%), Positives = 97/238 (40%), Gaps = 3/238 (1%)
 Frame = +2

Query: 302  DDDRDAKNKKSQRGRRHNXXXXXXXXXX-VKSRKIQERRRHITKAEYDVGRDAKNKKSQX 478
            DD RDAK  K Q+GRRH+           V ++ IQ+ +RH+ + +YD GRDAKNKKSQ 
Sbjct: 269  DDGRDAKTIKLQQGRRHDSDEDDHDNDRDVINKMIQKEKRHVAEDKYDDGRDAKNKKSQ- 327

Query: 479  XXXXXXXXXXXXXXXXVKSRKIQEGRRHVTEGE-CDDGRDAKNKKSQRGXXXXXXXXXXX 655
                            VK RKIQEGRRH ++ E   DG  A  +                
Sbjct: 328  --RKHYSDDDGGGDPDVKIRKIQEGRRHNSKAEYVIDGSSASQE---------------- 369

Query: 656  XXXXXXXXXIQKDRRYGSDDREYDEGYTAXXXXXXXXXRSDSDKDEGEIXXXXXXXXXXX 835
                     ++  R+   +  +  EG +          R DS KDE  +           
Sbjct: 370  --------LLRGKRKLDDESLDQREGKS---------RRRDSSKDEKYL-----RADTEA 407

Query: 836  XXXERSYHRRKGVDRTKSEKINTS-GRRDDSGGMWESSVTKERAFQEEDLKKTEDAQV 1006
                RSY  R   DR+K ++   S G  + + G  E+ +      Q E  ++  D +V
Sbjct: 408  ENPNRSY--RSTEDRSKDQQTRRSGGEYEGNDGERENKIQSGNELQRESQRENRDYEV 463


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