BLASTX nr result

ID: Atropa21_contig00012241 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00012241
         (1973 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMS59266.1| Threonyl-tRNA synthetase, mitochondrial [Triticum...    60   3e-06
gb|EMT09624.1| Zinc finger protein 410 [Aegilops tauschii]             60   3e-06

>gb|EMS59266.1| Threonyl-tRNA synthetase, mitochondrial [Triticum urartu]
          Length = 1047

 Score = 60.5 bits (145), Expect = 3e-06
 Identities = 32/54 (59%), Positives = 37/54 (68%)
 Frame = +2

Query: 1802 LVKLLSCDQEVMGSSRGNSLLQKCKVRLRTIDSCCPVLP*TPHIVGA*CTGLPF 1963
            +++LL CD EV GSS GNSLLQKC+ RLRTID+        P   GA CTGLPF
Sbjct: 632  ILELLPCDHEVTGSSPGNSLLQKCRDRLRTIDAKWSDPSPDPGQAGATCTGLPF 685


>gb|EMT09624.1| Zinc finger protein 410 [Aegilops tauschii]
          Length = 1424

 Score = 60.1 bits (144), Expect = 3e-06
 Identities = 41/91 (45%), Positives = 53/91 (58%), Gaps = 4/91 (4%)
 Frame = -3

Query: 1896 SIVRSLTLHFCKRLFPRLEPMTSWSHDNNFTSYSK-AHIFIIFQV---GKIAISP*VIVL 1729
            SIVRSL LHFCKRLFP LEP+TSWS  NNFT+  +   I + FQ        +SP V++ 
Sbjct: 73   SIVRSLPLHFCKRLFPGLEPVTSWSQGNNFTAAPRLPFINVAFQTLNQKTTVLSPEVLLS 132

Query: 1728 FLFSFQRYLTKHI*PSTKTNVLFNPIIDYII 1636
                  RY +K     T  N+L +P ++ II
Sbjct: 133  AGVPCCRYFSKADWFRTLENLL-SPSLELII 162


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