BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00012182
         (3078 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006351506.1| PREDICTED: DNA-directed RNA polymerases IV a...  1811   0.0  
ref|XP_004236361.1| PREDICTED: DNA-directed RNA polymerase D sub...  1810   0.0  
ref|XP_006364477.1| PREDICTED: DNA-directed RNA polymerases IV a...  1746   0.0  
ref|XP_004245914.1| PREDICTED: DNA-directed RNA polymerase D sub...  1722   0.0  
gb|AAY68206.1| RNA polymerase IV second largest subunit [Solanum...  1630   0.0  
ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D sub...  1529   0.0  
gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhodode...  1519   0.0  
emb|CBI21137.3| unnamed protein product [Vitis vinifera]             1510   0.0  
ref|XP_006442883.1| hypothetical protein CICLE_v10018562mg [Citr...  1459   0.0  
gb|EOY29336.1| DNA-directed RNA polymerase isoform 1 [Theobroma ...  1456   0.0  
gb|EMJ26641.1| hypothetical protein PRUPE_ppa000410mg [Prunus pe...  1439   0.0  
ref|XP_002324332.2| DNA-directed RNA polymerase family protein [...  1438   0.0  
ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putativ...  1417   0.0  
ref|XP_004145500.1| PREDICTED: DNA-directed RNA polymerase D sub...  1416   0.0  
ref|XP_004501385.1| PREDICTED: DNA-directed RNA polymerase D sub...  1411   0.0  
gb|EPS73521.1| hypothetical protein M569_01229, partial [Genlise...  1406   0.0  
ref|XP_004288915.1| PREDICTED: DNA-directed RNA polymerase D sub...  1404   0.0  
gb|EOY29337.1| DNA-directed RNA polymerase isoform 2 [Theobroma ...  1391   0.0  
ref|XP_003527775.1| PREDICTED: DNA-directed RNA polymerases IV a...  1390   0.0  
ref|XP_003523670.1| PREDICTED: DNA-directed RNA polymerases IV a...  1389   0.0  

>ref|XP_006351506.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Solanum tuberosum]
          Length = 1217

 Score = 1811 bits (4691), Expect = 0.0
 Identities = 894/991 (90%), Positives = 915/991 (92%)
 Frame = -2

Query: 3077 LCWMNGVDNPDCEFDHGGYFIVKGAEKTFIAQEQICLKRLWVYNNPTWMVGYRPGDKRKR 2898
            LCWMNGVD  DCEFDHGGYFIVKGAEKTFIAQEQ+CLKRLWV NNPTWMVGYRPG+KRKR
Sbjct: 227  LCWMNGVDKLDCEFDHGGYFIVKGAEKTFIAQEQLCLKRLWVSNNPTWMVGYRPGEKRKR 286

Query: 2897 IYIKLTETLKLEHIKGGEKALSVYFLAEMPIWILFFALGVSSDRXXXXXXXXXXXXXXXX 2718
            +YIKLTETLKLEHIKGGEKALSVY LAEMPIW+LFFALGVSSDR                
Sbjct: 287  VYIKLTETLKLEHIKGGEKALSVYILAEMPIWVLFFALGVSSDREVVNLIDVDIEDTTIV 346

Query: 2717 XXLMASIHEVDKNCEDFRKGKKALAYVDRLIKSCKFPPQESVEQCIKEYLFPNLSGFKQK 2538
              L+ASIHE DKNCEDFRKGKKALAYVDRLIK+CKFPPQESVE+CI  YLFPNLSGFKQK
Sbjct: 347  NILVASIHEADKNCEDFRKGKKALAYVDRLIKNCKFPPQESVEECINAYLFPNLSGFKQK 406

Query: 2537 ARFLGYMVKCLLHSFIGRRKVDNRDDFRNKXXXXXXXXXXXXXXAHIKHAERRMVKAMQR 2358
            ARFLGYMVKCLLHSFIGRRKVDNRDDFRNK              AHIKHAERRMVKAMQR
Sbjct: 407  ARFLGYMVKCLLHSFIGRRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMVKAMQR 466

Query: 2357 DLYGDRQVQPIEHYLDASIITNGLSRAFSTGHWCHAYKRMERVSGVVATLRRTNPLQMTA 2178
            DLYGDRQVQPIEHYLDASIITNGLSRAFSTGHWCH YKRMERVSGVVATLRRTNPLQMTA
Sbjct: 467  DLYGDRQVQPIEHYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTA 526

Query: 2177 DMRKMRQQVTYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTTILKPL 1998
            DMRK RQQVTYTGKVGDARYPHPSHWGK+CFLSTPDGENCGLVKNLASMGLVST ILKP 
Sbjct: 527  DMRKSRQQVTYTGKVGDARYPHPSHWGKLCFLSTPDGENCGLVKNLASMGLVSTIILKPF 586

Query: 1997 LETLFRCGMQKLVDDSATSLHGKQKVLLDGEWVGVCEDSALFVSKLRRKRRRNEVPHQVE 1818
            LETLFRCGMQKLVDD ATSLHGKQKVLLDGEWVGVCEDSALFVSKLRRKRRRNEVPHQVE
Sbjct: 587  LETLFRCGMQKLVDDCATSLHGKQKVLLDGEWVGVCEDSALFVSKLRRKRRRNEVPHQVE 646

Query: 1817 VKRDELQGEIRIFSDAGRILRPLLVVSNLKKIKALKGGDYGFQALLDNXXXXXXXXXXXE 1638
            VKRDELQGE+RIFSD+GRILRPLLVVSNLKKIKALKGGDYGFQ+LLDN           E
Sbjct: 647  VKRDELQGEVRIFSDSGRILRPLLVVSNLKKIKALKGGDYGFQSLLDNGIIEFIGPEEEE 706

Query: 1637 DCRTAWGVEYILKADKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHS 1458
            DCRTAWGVEYILKADKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHS
Sbjct: 707  DCRTAWGVEYILKADKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHS 766

Query: 1457 QQAIGFSTVNPNNRVDTNTHQLYYPQRPLFRTMLSDSLGKPKNARHQKGMLPRPEYYNGQ 1278
            QQAIGFSTVNPNNRVDTNTHQLYYPQRPLFRTML+DSLGKPK  ++QKGMLPRPEY+NGQ
Sbjct: 767  QQAIGFSTVNPNNRVDTNTHQLYYPQRPLFRTMLADSLGKPKCTQYQKGMLPRPEYFNGQ 826

Query: 1277 CAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHVRSYKAEVDNKEAVAKKLKVEDSVNF 1098
            CAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHVRSYKAEVDNKEA+AKKLK+EDSVNF
Sbjct: 827  CAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHVRSYKAEVDNKEAMAKKLKIEDSVNF 886

Query: 1097 GKTQSKIGRVDSLDDDGFPFIGANLQSGDIIIGKFAESGADHSVKLKHTERGMVQKVLLS 918
            GKTQSKIGRVDSLDDDGFPFIGANLQSGDIIIGKFAESGADHSVKLKHTERGMVQKVLLS
Sbjct: 887  GKTQSKIGRVDSLDDDGFPFIGANLQSGDIIIGKFAESGADHSVKLKHTERGMVQKVLLS 946

Query: 917  ANDEGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTVQGIVPDIVINPH 738
            ANDEGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFT+QGIVPDIVINPH
Sbjct: 947  ANDEGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPH 1006

Query: 737  AFPSRQTPGQXXXXXXXXXXXXXXXXXXATPFSTLSVDAIMEQLHGRGFSRWGNERVYNG 558
            AFPSRQTPGQ                  ATPFSTLSVDAIMEQL GRGF+RWGNERVYNG
Sbjct: 1007 AFPSRQTPGQLLEAALGKGIALGGGQKYATPFSTLSVDAIMEQLQGRGFTRWGNERVYNG 1066

Query: 557  RTGEMVNSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMER 378
            RTGEMV+SLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMER
Sbjct: 1067 RTGEMVHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMER 1126

Query: 377  DCLIAHGAAANLHERLFTLSDSSQMHICGKCKNMANVIQRSVQGGKVRGPFCRFCESVED 198
            DCLIAHGAAANLHERLFTLSDSSQMHICGKCKNMANVIQR+VQGGKVRGPFCRFCESVED
Sbjct: 1127 DCLIAHGAAANLHERLFTLSDSSQMHICGKCKNMANVIQRTVQGGKVRGPFCRFCESVED 1186

Query: 197  IVKVNVPYGAKLLCQELFSMGISLKFDTEIC 105
            IVKVNVPYGAKLLCQELFSMGISLKFDTEIC
Sbjct: 1187 IVKVNVPYGAKLLCQELFSMGISLKFDTEIC 1217


>ref|XP_004236361.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a [Solanum
            lycopersicum]
          Length = 1217

 Score = 1810 bits (4687), Expect = 0.0
 Identities = 893/991 (90%), Positives = 915/991 (92%)
 Frame = -2

Query: 3077 LCWMNGVDNPDCEFDHGGYFIVKGAEKTFIAQEQICLKRLWVYNNPTWMVGYRPGDKRKR 2898
            LCWMNGVD  DCEFDHGGYFIVKGAEKTFIAQEQ+CLKRLWV NNPTWMVGYRPG+KRKR
Sbjct: 227  LCWMNGVDKLDCEFDHGGYFIVKGAEKTFIAQEQLCLKRLWVSNNPTWMVGYRPGEKRKR 286

Query: 2897 IYIKLTETLKLEHIKGGEKALSVYFLAEMPIWILFFALGVSSDRXXXXXXXXXXXXXXXX 2718
            +YIKLTETLKLEHIKGGEKALSVY LAEMPIW+LFFALGVSSDR                
Sbjct: 287  VYIKLTETLKLEHIKGGEKALSVYILAEMPIWVLFFALGVSSDREVVNLIDVDIEDTTIV 346

Query: 2717 XXLMASIHEVDKNCEDFRKGKKALAYVDRLIKSCKFPPQESVEQCIKEYLFPNLSGFKQK 2538
              L+ASIHE DKNCEDFRKGKKALAYVDRLIK+CKFPPQESVE+CI  YLFPNLSGFKQK
Sbjct: 347  NILVASIHEADKNCEDFRKGKKALAYVDRLIKNCKFPPQESVEECINAYLFPNLSGFKQK 406

Query: 2537 ARFLGYMVKCLLHSFIGRRKVDNRDDFRNKXXXXXXXXXXXXXXAHIKHAERRMVKAMQR 2358
            ARFLGYMVKCLLHSFIGRRKVDNRDDFRNK              AHIKHAERRMVKAMQR
Sbjct: 407  ARFLGYMVKCLLHSFIGRRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMVKAMQR 466

Query: 2357 DLYGDRQVQPIEHYLDASIITNGLSRAFSTGHWCHAYKRMERVSGVVATLRRTNPLQMTA 2178
            DLYGDRQVQPIEHYLDASIITNGLSRAFSTGHWCH YKRMERVSGVVATLRRTNPLQMTA
Sbjct: 467  DLYGDRQVQPIEHYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTA 526

Query: 2177 DMRKMRQQVTYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTTILKPL 1998
            DMRK RQQVTYTGKVGDARYPHPSHWGK+CFLSTPDGENCGLVKNLASMGLVST ILKP 
Sbjct: 527  DMRKSRQQVTYTGKVGDARYPHPSHWGKLCFLSTPDGENCGLVKNLASMGLVSTIILKPF 586

Query: 1997 LETLFRCGMQKLVDDSATSLHGKQKVLLDGEWVGVCEDSALFVSKLRRKRRRNEVPHQVE 1818
            LETLFRCGMQKLVDD +TSLHGKQKVLLDGEWVGVCEDSALFVSKLRRKRRRNEVPHQVE
Sbjct: 587  LETLFRCGMQKLVDDCSTSLHGKQKVLLDGEWVGVCEDSALFVSKLRRKRRRNEVPHQVE 646

Query: 1817 VKRDELQGEIRIFSDAGRILRPLLVVSNLKKIKALKGGDYGFQALLDNXXXXXXXXXXXE 1638
            VKRDELQGE+RIFSD GRILRPLLVVSNLKKIKALKGGDYGFQ+LLDN           E
Sbjct: 647  VKRDELQGEVRIFSDPGRILRPLLVVSNLKKIKALKGGDYGFQSLLDNGIIELIGPEEEE 706

Query: 1637 DCRTAWGVEYILKADKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHS 1458
            DCRTAWGVEYILKADKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHS
Sbjct: 707  DCRTAWGVEYILKADKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHS 766

Query: 1457 QQAIGFSTVNPNNRVDTNTHQLYYPQRPLFRTMLSDSLGKPKNARHQKGMLPRPEYYNGQ 1278
            QQAIGFSTVNPNNRVDTNTHQLYYPQRPLFRTML+DSLGKPK A++QKGMLPRPEY+NGQ
Sbjct: 767  QQAIGFSTVNPNNRVDTNTHQLYYPQRPLFRTMLADSLGKPKCAQYQKGMLPRPEYFNGQ 826

Query: 1277 CAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHVRSYKAEVDNKEAVAKKLKVEDSVNF 1098
            CAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHVRSYKAEVDNKEA+AKKLK+EDSVNF
Sbjct: 827  CAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHVRSYKAEVDNKEAMAKKLKIEDSVNF 886

Query: 1097 GKTQSKIGRVDSLDDDGFPFIGANLQSGDIIIGKFAESGADHSVKLKHTERGMVQKVLLS 918
            GKTQSKIGRVDSLDDDGFPFIGANLQSGDIIIGKF+ESGADHSVKLKHTERGMVQKVLLS
Sbjct: 887  GKTQSKIGRVDSLDDDGFPFIGANLQSGDIIIGKFSESGADHSVKLKHTERGMVQKVLLS 946

Query: 917  ANDEGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTVQGIVPDIVINPH 738
            ANDEGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFT+QGIVPDIVINPH
Sbjct: 947  ANDEGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPH 1006

Query: 737  AFPSRQTPGQXXXXXXXXXXXXXXXXXXATPFSTLSVDAIMEQLHGRGFSRWGNERVYNG 558
            AFPSRQTPGQ                  ATPFSTLSVDAIMEQL GRGF+RWGNERVYNG
Sbjct: 1007 AFPSRQTPGQLLEAALGKGIALGGGQKYATPFSTLSVDAIMEQLQGRGFTRWGNERVYNG 1066

Query: 557  RTGEMVNSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMER 378
            RTGEMV+SLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMER
Sbjct: 1067 RTGEMVHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMER 1126

Query: 377  DCLIAHGAAANLHERLFTLSDSSQMHICGKCKNMANVIQRSVQGGKVRGPFCRFCESVED 198
            DCLIAHGAAANLHERLFTLSDSSQMHICGKCKNMANVIQR+VQGGKVRGPFCRFCESVED
Sbjct: 1127 DCLIAHGAAANLHERLFTLSDSSQMHICGKCKNMANVIQRTVQGGKVRGPFCRFCESVED 1186

Query: 197  IVKVNVPYGAKLLCQELFSMGISLKFDTEIC 105
            IVKVNVPYGAKLLCQELFSMGISLKFDTEIC
Sbjct: 1187 IVKVNVPYGAKLLCQELFSMGISLKFDTEIC 1217


>ref|XP_006364477.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Solanum tuberosum]
          Length = 1219

 Score = 1746 bits (4522), Expect = 0.0
 Identities = 863/995 (86%), Positives = 896/995 (90%), Gaps = 4/995 (0%)
 Frame = -2

Query: 3077 LCWMNGVDNPDCEFDHGGYFIVKGAEKTFIAQEQICLKRLWVYNNPTWMVGYRPGDKRKR 2898
            LCWM+G D PDC+FDHGGYFIVKGAEK FIAQEQICLKRLWV N+ TWMV YR G+KR R
Sbjct: 225  LCWMSGADRPDCDFDHGGYFIVKGAEKIFIAQEQICLKRLWVSNHSTWMVAYRSGEKRNR 284

Query: 2897 IYIKLTETLKLEHIKGGEKALSVYFLAEMPIWILFFALGVSSDRXXXXXXXXXXXXXXXX 2718
            +Y+KLTETLK EHIKG  KALSVYFLAEMPIW+LFFALGVSSDR                
Sbjct: 285  VYLKLTETLKHEHIKGEAKALSVYFLAEMPIWVLFFALGVSSDREIVDLIDVDIKDTNII 344

Query: 2717 XXLMASIHEVDKNCEDFRKGKKALAYVDRLIKSCKFPPQESVEQCIKEYLFPNLSGFKQK 2538
              L+ASIH+ DKNCEDFRKGKKALAYVDRLIKSCKFPPQESVE+CIKEYLFPNLSG KQK
Sbjct: 345  NILVASIHDADKNCEDFRKGKKALAYVDRLIKSCKFPPQESVEECIKEYLFPNLSGLKQK 404

Query: 2537 ARFLGYMVKCLLHSFIGRRKVDNRDDFRNKXXXXXXXXXXXXXXAHIKHAERRMVKAMQR 2358
            ARFLGYMVKCLL S+IGRRKVDNRDDFRNK              AHIKHAERRMVKA+QR
Sbjct: 405  ARFLGYMVKCLLLSYIGRRKVDNRDDFRNKRLDLAGELLERELRAHIKHAERRMVKALQR 464

Query: 2357 DLYGDRQVQPIEHYLDASIITNGLSRAFSTGHWCHAYKRMERVSGVVATLRRTNPLQMTA 2178
            DL GDRQVQP+EHYLDASIITNGLSRAFSTGHWCH YKRMERVSGVVATLRRTNPLQMTA
Sbjct: 465  DLCGDRQVQPLEHYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTA 524

Query: 2177 DMRKMRQQVTYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTTILKPL 1998
            D+RK RQQVTYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTT+LKPL
Sbjct: 525  DLRKTRQQVTYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTTVLKPL 584

Query: 1997 LETLFRCGMQKLVDDSATSLHGKQKVLLDGEWVGVCEDSALFVSKLRRKRRRNEVPHQVE 1818
            LETLFRCGMQKLVDDSATSLHGKQKVLLDG+WVGVCEDSALFVSKLRRKRRRNEVPHQVE
Sbjct: 585  LETLFRCGMQKLVDDSATSLHGKQKVLLDGDWVGVCEDSALFVSKLRRKRRRNEVPHQVE 644

Query: 1817 VKRDELQGEIRIFSDAGRILRPLLVVSNLKKIKALK----GGDYGFQALLDNXXXXXXXX 1650
            VKRDE Q E+RIFSDAGRI+RPLLVVSNLK IK+LK    GGDYGFQ LLD         
Sbjct: 645  VKRDEQQDEVRIFSDAGRIMRPLLVVSNLKNIKSLKDGMKGGDYGFQTLLDKGIIELIGP 704

Query: 1649 XXXEDCRTAWGVEYILKADKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQS 1470
               EDCRTAWGVEY+LKADKENPP  YTHCELDMSFLLGLSCG+IPFANHDHARRVLYQS
Sbjct: 705  EEEEDCRTAWGVEYLLKADKENPPVNYTHCELDMSFLLGLSCGLIPFANHDHARRVLYQS 764

Query: 1469 EKHSQQAIGFSTVNPNNRVDTNTHQLYYPQRPLFRTMLSDSLGKPKNARHQKGMLPRPEY 1290
            EKHSQQAIGFSTVNPN RVDTNTHQLYYPQRPLF TMLSDSLGKPK  RHQKGML RPEY
Sbjct: 765  EKHSQQAIGFSTVNPNARVDTNTHQLYYPQRPLFGTMLSDSLGKPKCGRHQKGMLSRPEY 824

Query: 1289 YNGQCAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHVRSYKAEVDNKEAVAKKLKVED 1110
            YNGQCAIVAVNVHLGYNQEDS+VMNRASLERGMFRSEHVRSYKAEVDNKEA+ KK KVED
Sbjct: 825  YNGQCAIVAVNVHLGYNQEDSVVMNRASLERGMFRSEHVRSYKAEVDNKEAMGKKSKVED 884

Query: 1109 SVNFGKTQSKIGRVDSLDDDGFPFIGANLQSGDIIIGKFAESGADHSVKLKHTERGMVQK 930
            SVNFGKTQSKIGRVDSLDDDGFPFIGANLQSGDIIIGK+AESGADHSVK+KHTERGMVQK
Sbjct: 885  SVNFGKTQSKIGRVDSLDDDGFPFIGANLQSGDIIIGKYAESGADHSVKMKHTERGMVQK 944

Query: 929  VLLSANDEGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTVQGIVPDIV 750
            VLLSAND+GKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLG+LESQENFPFTVQGIVPDIV
Sbjct: 945  VLLSANDDGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGYLESQENFPFTVQGIVPDIV 1004

Query: 749  INPHAFPSRQTPGQXXXXXXXXXXXXXXXXXXATPFSTLSVDAIMEQLHGRGFSRWGNER 570
            INPHAFPSRQTPGQ                  ATPFS LSVDAI++QLHGRGFSRWG+ER
Sbjct: 1005 INPHAFPSRQTPGQLLEAALGKGIALGGGEKYATPFSALSVDAILKQLHGRGFSRWGSER 1064

Query: 569  VYNGRTGEMVNSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFG 390
            VYNGRTGEMV+SLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFG
Sbjct: 1065 VYNGRTGEMVHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFG 1124

Query: 389  EMERDCLIAHGAAANLHERLFTLSDSSQMHICGKCKNMANVIQRSVQGGKVRGPFCRFCE 210
            EMERDCLIAHGAAANLHERLFTLSDSSQMHICGKCKNMANVIQRS  GGK+RGPFCRFCE
Sbjct: 1125 EMERDCLIAHGAAANLHERLFTLSDSSQMHICGKCKNMANVIQRSAPGGKIRGPFCRFCE 1184

Query: 209  SVEDIVKVNVPYGAKLLCQELFSMGISLKFDTEIC 105
            SVEDIVKV+VPYGAKLLCQELFSMGISLKFDTEIC
Sbjct: 1185 SVEDIVKVDVPYGAKLLCQELFSMGISLKFDTEIC 1219


>ref|XP_004245914.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Solanum
            lycopersicum]
          Length = 1219

 Score = 1722 bits (4460), Expect = 0.0
 Identities = 854/995 (85%), Positives = 885/995 (88%), Gaps = 4/995 (0%)
 Frame = -2

Query: 3077 LCWMNGVDNPDCEFDHGGYFIVKGAEKTFIAQEQICLKRLWVYNNPTWMVGYRPGDKRKR 2898
            LCWM+G D  DCEFDHGGYFIVKGAEK FIAQEQ+CLKRLWV N+ TWMV YR G+KR R
Sbjct: 225  LCWMSGADRLDCEFDHGGYFIVKGAEKIFIAQEQMCLKRLWVSNHYTWMVAYRSGEKRNR 284

Query: 2897 IYIKLTETLKLEHIKGGEKALSVYFLAEMPIWILFFALGVSSDRXXXXXXXXXXXXXXXX 2718
            +Y+KLTETLK E IKG  K+LSVYFLAEMPIW+LFFALGVSSDR                
Sbjct: 285  VYLKLTETLKHEQIKGEAKSLSVYFLAEMPIWVLFFALGVSSDREVVDLIDVDIKDNKII 344

Query: 2717 XXLMASIHEVDKNCEDFRKGKKALAYVDRLIKSCKFPPQESVEQCIKEYLFPNLSGFKQK 2538
              L+ASIH+ DKNCEDFRKGK+ALAYVDRLIKSCKFPPQESVE+CIKEYLFPNLSG KQK
Sbjct: 345  NILVASIHDADKNCEDFRKGKRALAYVDRLIKSCKFPPQESVEECIKEYLFPNLSGLKQK 404

Query: 2537 ARFLGYMVKCLLHSFIGRRKVDNRDDFRNKXXXXXXXXXXXXXXAHIKHAERRMVKAMQR 2358
            ARFLGYMVKCLL S+IGRRKVDNRDDFRNK               HIKHAERRMVKA+QR
Sbjct: 405  ARFLGYMVKCLLLSYIGRRKVDNRDDFRNKRLDLAGELLERELRVHIKHAERRMVKALQR 464

Query: 2357 DLYGDRQVQPIEHYLDASIITNGLSRAFSTGHWCHAYKRMERVSGVVATLRRTNPLQMTA 2178
            DL GDRQV PIEHYLDASIITNGLSRAFSTGHWCH YKRMERVSGVVATLRRTNPLQMTA
Sbjct: 465  DLCGDRQVHPIEHYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTA 524

Query: 2177 DMRKMRQQVTYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTTILKPL 1998
            D+RK RQQVTYTGKVGDARYP+PSHWGKVCFLSTPDGENCGLVKNLASMGLVSTT+L PL
Sbjct: 525  DLRKTRQQVTYTGKVGDARYPNPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTTVLMPL 584

Query: 1997 LETLFRCGMQKLVDDSATSLHGKQKVLLDGEWVGVCEDSALFVSKLRRKRRRNEVPHQVE 1818
            LETLFRCGMQKLVDD ATSLHGKQKVLLDG+WVGVCEDSALFVSKLRRKRRRNEVPHQVE
Sbjct: 585  LETLFRCGMQKLVDDCATSLHGKQKVLLDGDWVGVCEDSALFVSKLRRKRRRNEVPHQVE 644

Query: 1817 VKRDELQGEIRIFSDAGRILRPLLVVSNLKKIKAL----KGGDYGFQALLDNXXXXXXXX 1650
            VKRDE Q E+RIFSDAGRI+RPLLVVSNLK IKAL    KGGDYGFQ LLD         
Sbjct: 645  VKRDEQQDEVRIFSDAGRIMRPLLVVSNLKNIKALNGGVKGGDYGFQTLLDKGIIELIGP 704

Query: 1649 XXXEDCRTAWGVEYILKADKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQS 1470
               EDCRTAWGVEY+LKADKENPP  YTHCELDMSFLLGLSCG+IPFANHDHARRVLYQS
Sbjct: 705  EEEEDCRTAWGVEYLLKADKENPPVNYTHCELDMSFLLGLSCGLIPFANHDHARRVLYQS 764

Query: 1469 EKHSQQAIGFSTVNPNNRVDTNTHQLYYPQRPLFRTMLSDSLGKPKNARHQKGMLPRPEY 1290
            EKHSQQAIGFSTVNPN RVDTNTHQLYYPQRPLF TMLSDSLGKPK ARHQ+GML RPEY
Sbjct: 765  EKHSQQAIGFSTVNPNIRVDTNTHQLYYPQRPLFGTMLSDSLGKPKCARHQRGMLSRPEY 824

Query: 1289 YNGQCAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHVRSYKAEVDNKEAVAKKLKVED 1110
            YNGQCAIVAVNVHLGYNQEDS+VMNRASLERGMFRSEHVRSYKAEVDN EA  KK K ED
Sbjct: 825  YNGQCAIVAVNVHLGYNQEDSVVMNRASLERGMFRSEHVRSYKAEVDNMEATGKKSKAED 884

Query: 1109 SVNFGKTQSKIGRVDSLDDDGFPFIGANLQSGDIIIGKFAESGADHSVKLKHTERGMVQK 930
            SVNFGKTQSKIGRVD LDDDG P+IGANLQSGDIIIGKFAESGADHSVK+KHTE+GMVQK
Sbjct: 885  SVNFGKTQSKIGRVDCLDDDGLPYIGANLQSGDIIIGKFAESGADHSVKMKHTEKGMVQK 944

Query: 929  VLLSANDEGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTVQGIVPDIV 750
            VLLSANDEGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLG+LESQENFPFTVQGIVPDIV
Sbjct: 945  VLLSANDEGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGYLESQENFPFTVQGIVPDIV 1004

Query: 749  INPHAFPSRQTPGQXXXXXXXXXXXXXXXXXXATPFSTLSVDAIMEQLHGRGFSRWGNER 570
            INPHAFPSRQTPGQ                  ATPFS LSVDAI++QLHGRGFSRWGNER
Sbjct: 1005 INPHAFPSRQTPGQLLEAALGKGIALGGGEKYATPFSALSVDAILKQLHGRGFSRWGNER 1064

Query: 569  VYNGRTGEMVNSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFG 390
            VYNGRTGEMV+SLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFG
Sbjct: 1065 VYNGRTGEMVHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFG 1124

Query: 389  EMERDCLIAHGAAANLHERLFTLSDSSQMHICGKCKNMANVIQRSVQGGKVRGPFCRFCE 210
            EMERDCLIAHGAAANLHERLFTLSDSSQMHICGKCKNMANVIQR V GGKVRGPFCRFCE
Sbjct: 1125 EMERDCLIAHGAAANLHERLFTLSDSSQMHICGKCKNMANVIQRPVPGGKVRGPFCRFCE 1184

Query: 209  SVEDIVKVNVPYGAKLLCQELFSMGISLKFDTEIC 105
            SVEDIVKV VPYGAKLLCQELFSMGISLKFDTEIC
Sbjct: 1185 SVEDIVKVGVPYGAKLLCQELFSMGISLKFDTEIC 1219


>gb|AAY68206.1| RNA polymerase IV second largest subunit [Solanum lycopersicum]
          Length = 1123

 Score = 1630 bits (4221), Expect = 0.0
 Identities = 805/903 (89%), Positives = 826/903 (91%)
 Frame = -2

Query: 3077 LCWMNGVDNPDCEFDHGGYFIVKGAEKTFIAQEQICLKRLWVYNNPTWMVGYRPGDKRKR 2898
            LCWMNGVD  DCEFDHGGYFI KGAEKTFIAQEQ+CLKRLWV NNPTWMVGYRPG+KRKR
Sbjct: 221  LCWMNGVDKLDCEFDHGGYFIAKGAEKTFIAQEQLCLKRLWVSNNPTWMVGYRPGEKRKR 280

Query: 2897 IYIKLTETLKLEHIKGGEKALSVYFLAEMPIWILFFALGVSSDRXXXXXXXXXXXXXXXX 2718
            +YIKLTETLKLEHIKGGEKALSVY LAEMPIW+LFFALGVSSDR                
Sbjct: 281  VYIKLTETLKLEHIKGGEKALSVYILAEMPIWVLFFALGVSSDREVVNLIDVDIEDTTIV 340

Query: 2717 XXLMASIHEVDKNCEDFRKGKKALAYVDRLIKSCKFPPQESVEQCIKEYLFPNLSGFKQK 2538
              L+ASIHE DKNCEDFRKGKKALAYVDRLIK+CKFPPQESVE+CI  YLFPNLSGFKQK
Sbjct: 341  NILVASIHEADKNCEDFRKGKKALAYVDRLIKNCKFPPQESVEECINAYLFPNLSGFKQK 400

Query: 2537 ARFLGYMVKCLLHSFIGRRKVDNRDDFRNKXXXXXXXXXXXXXXAHIKHAERRMVKAMQR 2358
            ARFLGYMVKCLLHSFIGRRKVDNRDDFRNK              AHIKHAERRMVKAMQR
Sbjct: 401  ARFLGYMVKCLLHSFIGRRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMVKAMQR 460

Query: 2357 DLYGDRQVQPIEHYLDASIITNGLSRAFSTGHWCHAYKRMERVSGVVATLRRTNPLQMTA 2178
            DLYGDRQVQPIEHYLDASIITNGLSRAFSTGHWCH YKRMERVSGVVATLRRTNPLQMTA
Sbjct: 461  DLYGDRQVQPIEHYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTA 520

Query: 2177 DMRKMRQQVTYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTTILKPL 1998
            DMRK RQQVTYTGKVGDARYPHPSHWGK+CFLSTPDGENCGLVKNLASMGLVST ILKP 
Sbjct: 521  DMRKSRQQVTYTGKVGDARYPHPSHWGKLCFLSTPDGENCGLVKNLASMGLVSTIILKPF 580

Query: 1997 LETLFRCGMQKLVDDSATSLHGKQKVLLDGEWVGVCEDSALFVSKLRRKRRRNEVPHQVE 1818
            LETLFRCGMQKLVDD +TSLHGKQKVLLDGEWVGVCEDSALFVSKLRRKRRRNEVPHQVE
Sbjct: 581  LETLFRCGMQKLVDDCSTSLHGKQKVLLDGEWVGVCEDSALFVSKLRRKRRRNEVPHQVE 640

Query: 1817 VKRDELQGEIRIFSDAGRILRPLLVVSNLKKIKALKGGDYGFQALLDNXXXXXXXXXXXE 1638
            VKRDELQGE+RIFSD GRILRPLLVVSNLKKIKALKGGDYGFQ+LLDN           E
Sbjct: 641  VKRDELQGEVRIFSDPGRILRPLLVVSNLKKIKALKGGDYGFQSLLDNGIIELIGPEEEE 700

Query: 1637 DCRTAWGVEYILKADKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHS 1458
            DCRTAWGVEYILKADKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHS
Sbjct: 701  DCRTAWGVEYILKADKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHS 760

Query: 1457 QQAIGFSTVNPNNRVDTNTHQLYYPQRPLFRTMLSDSLGKPKNARHQKGMLPRPEYYNGQ 1278
            QQAIGFSTVNPNNRVDTNTHQLYYPQRPLFRTML+DSLGKPK A++QKGMLPRPEY+NGQ
Sbjct: 761  QQAIGFSTVNPNNRVDTNTHQLYYPQRPLFRTMLADSLGKPKCAQYQKGMLPRPEYFNGQ 820

Query: 1277 CAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHVRSYKAEVDNKEAVAKKLKVEDSVNF 1098
            CAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHVRSYKAEVDNKEA+AKKLK+EDSVNF
Sbjct: 821  CAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHVRSYKAEVDNKEAMAKKLKIEDSVNF 880

Query: 1097 GKTQSKIGRVDSLDDDGFPFIGANLQSGDIIIGKFAESGADHSVKLKHTERGMVQKVLLS 918
            GKTQSKIGRVDSLDDDGFPFIGANLQSGDIIIGKF+ESGADHSVKLKHTERGMVQKVLLS
Sbjct: 881  GKTQSKIGRVDSLDDDGFPFIGANLQSGDIIIGKFSESGADHSVKLKHTERGMVQKVLLS 940

Query: 917  ANDEGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTVQGIVPDIVINPH 738
            ANDEGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFT+QGIVPDIVINPH
Sbjct: 941  ANDEGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPH 1000

Query: 737  AFPSRQTPGQXXXXXXXXXXXXXXXXXXATPFSTLSVDAIMEQLHGRGFSRWGNERVYNG 558
            AFPSRQTPGQ                  ATPFSTLSVDAIMEQL GRGF+RWGNERVYNG
Sbjct: 1001 AFPSRQTPGQLLEAALGKGIALGGGQKYATPFSTLSVDAIMEQLQGRGFTRWGNERVYNG 1060

Query: 557  RTGEMVNSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMER 378
            RTGEMV+SLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMER
Sbjct: 1061 RTGEMVHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMER 1120

Query: 377  DCL 369
            DCL
Sbjct: 1121 DCL 1123


>ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Vitis
            vinifera]
          Length = 1198

 Score = 1530 bits (3960), Expect = 0.0
 Identities = 752/997 (75%), Positives = 840/997 (84%), Gaps = 6/997 (0%)
 Frame = -2

Query: 3077 LCWMNGVDNPDCEFDHGGYFIVKGAEKTFIAQEQICLKRLWVYNNPTWMVGYRPGDKRKR 2898
            LCWMNGV+  DCE+DHGGYF++KGAEKTFIAQEQICLKRLWV +NPTWMV YRP  KRKR
Sbjct: 204  LCWMNGVERGDCEYDHGGYFLIKGAEKTFIAQEQICLKRLWVSSNPTWMVAYRPIWKRKR 263

Query: 2897 IYIKLTETLKLEHIKGGEKALSVYFLA-EMPIWILFFALGVSSDRXXXXXXXXXXXXXXX 2721
            +Y+KL E  K E+ +GGEK L+VYF + E+PIWILFFALG SSD+               
Sbjct: 264  VYVKL-EPPKDENNRGGEKVLTVYFSSTEIPIWILFFALGASSDKEVVDLIDFNIDDAGI 322

Query: 2720 XXXLMASIHEVDKNCED----FRKGKKALAYVDRLIKSCKFPPQESVEQCIKEYLFPNLS 2553
               L+ASIHE D+  E     FR+   A+++VD+L+KSCKFPP ES+++CI +YLFPN S
Sbjct: 323  SNILVASIHEADREAEKKGMYFRRQGNAISFVDKLVKSCKFPPGESIQECISKYLFPNFS 382

Query: 2552 GFKQKARFLGYMVKCLLHSFIGRRKVDNRDDFRNKXXXXXXXXXXXXXXAHIKHAERRMV 2373
            G KQKARFLGYMVKCLL ++ GRRK DNRDDFRNK               HI+HAERRMV
Sbjct: 383  GVKQKARFLGYMVKCLLQAYTGRRKCDNRDDFRNKRLELAGELLERELRVHIRHAERRMV 442

Query: 2372 KAMQRDLYGDRQVQPIEHYLDASIITNGLSRAFSTGHWCHAYKRMERVSGVVATLRRTNP 2193
            KAMQR+LYGDR ++PIE+YLDASIITNGLSRAFSTG W H +KRMER+SGVVATLRRTNP
Sbjct: 443  KAMQRELYGDRDLRPIENYLDASIITNGLSRAFSTGQWSHPFKRMERISGVVATLRRTNP 502

Query: 2192 LQMTADMRKMRQQVTYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTT 2013
            LQMTADMRK RQQV YTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLA  GLVST 
Sbjct: 503  LQMTADMRKTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLAITGLVSTE 562

Query: 2012 ILKPLLETLFRCGMQKLVDDSATSLHGKQKVLLDGEWVGVCEDSALFVSKLRRKRRRNEV 1833
            +L PL++ LF CGM+KLVDD++T L GK KV LDG+WVGVCED   FV +LR KRR  E+
Sbjct: 563  VLDPLVDKLFDCGMEKLVDDTSTKLSGKNKVFLDGDWVGVCEDPISFVVELRTKRRHKEL 622

Query: 1832 PHQVEVKRDELQGEIRIFSDAGRILRPLLVVSNLKKIKALKGGDYGFQALLDNXXXXXXX 1653
            P QVE+KRDE QGE+RIFSDAGRILRPLLVV NLKK+K  KG D+ FQ+LLD        
Sbjct: 623  PQQVEIKRDEQQGEVRIFSDAGRILRPLLVVENLKKVKTFKGDDFTFQSLLDKGIVELIG 682

Query: 1652 XXXXEDCRTAWGVEYILKADKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQ 1473
                EDC TAWG++Y+LK   ++PP KYTHCELDMSFLLGLSCGIIP+ANHDHARRVLYQ
Sbjct: 683  AEEEEDCSTAWGIKYLLKG-HDDPPVKYTHCELDMSFLLGLSCGIIPYANHDHARRVLYQ 741

Query: 1472 SEKHSQQAIGFSTVNPNNRVDTNTHQLYYPQRPLFRTMLSDSLGKPKNARHQKGMLPRPE 1293
            SEKHSQQAIGFST NPN RVDT +HQLYYPQRPLFRTM+SD LGKP  +   KG++PRPE
Sbjct: 742  SEKHSQQAIGFSTTNPNIRVDTLSHQLYYPQRPLFRTMISDCLGKPGYSEGHKGIVPRPE 801

Query: 1292 YYNGQCAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHVRSYKAEVDNKEAVAKKLKVE 1113
            Y+NGQ AIVAVNVHLGYNQEDSLVMNRASLERGMFRSEH+RSYK+EVDN E++ KK K E
Sbjct: 802  YFNGQIAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKSEVDNNESLDKKRKSE 861

Query: 1112 DSVNFGKTQSKIGRVDSLDDDGFPFIGANLQSGDIIIGKFAESGADHSVKLKHTERGMVQ 933
            DSV+FGK QSKIGRVDSLDDDGFPFIGANLQ+GDI+IG+ AESG DHS+KLKHTERGMVQ
Sbjct: 862  DSVHFGKMQSKIGRVDSLDDDGFPFIGANLQNGDIVIGRCAESGVDHSIKLKHTERGMVQ 921

Query: 932  KVLLSANDEGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTVQGIVPDI 753
            KV++SAND+GKNFAVVSLRQVR+PCLGDKFSSMHGQKGVLGFLESQENFPFT+QGIVPDI
Sbjct: 922  KVVVSANDDGKNFAVVSLRQVRTPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDI 981

Query: 752  VINPHAFPSRQTPGQXXXXXXXXXXXXXXXXXXATPFSTLSVDAIMEQLHGRGFSRWGNE 573
            VINPHAFPSRQTPGQ                  ATPFSTLSVDAI +QLH  GFSRWG+E
Sbjct: 982  VINPHAFPSRQTPGQLLEAALGKGIACGGLLRHATPFSTLSVDAIADQLHRAGFSRWGHE 1041

Query: 572  RVYNGRTGEMVNSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKF 393
            RVYNGRTGEM+ SLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPV+DRKRFGGIKF
Sbjct: 1042 RVYNGRTGEMLRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVSDRKRFGGIKF 1101

Query: 392  GEMERDCLIAHGAAANLHERLFTLSDSSQMHICGKCKNMANVIQRSVQGG-KVRGPFCRF 216
            GEMERDCLIAHGAAANLHERLFTLSDS+ MHIC +CKN++NVIQRSV GG KVRGP+CR+
Sbjct: 1102 GEMERDCLIAHGAAANLHERLFTLSDSAYMHICRRCKNISNVIQRSVAGGRKVRGPYCRY 1161

Query: 215  CESVEDIVKVNVPYGAKLLCQELFSMGISLKFDTEIC 105
            CES E+IVKVNVPYGAKLLCQELFSMGISLKF+T++C
Sbjct: 1162 CESSEEIVKVNVPYGAKLLCQELFSMGISLKFETQLC 1198


>gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhododendron macrophyllum]
          Length = 1019

 Score = 1519 bits (3934), Expect = 0.0
 Identities = 745/992 (75%), Positives = 827/992 (83%), Gaps = 2/992 (0%)
 Frame = -2

Query: 3077 LCWMNGVDNPDCEFDHGGYFIVKGAEKTFIAQEQICLKRLWVYNNPTWMVGYRPGDKRKR 2898
            LCWMNGV+  DC+FDHGGYF++KGAEKTFIAQEQICLKRLWV N+P+W V YR   KRKR
Sbjct: 28   LCWMNGVEKSDCDFDHGGYFLIKGAEKTFIAQEQICLKRLWVSNSPSWTVAYRDVSKRKR 87

Query: 2897 IYIKLTETLKLEHIKGGEKALSVYFLA-EMPIWILFFALGVSSDRXXXXXXXXXXXXXXX 2721
            +YIKL E  K EHI+GGEK LSVYF A E PIWILFFALG SSD+               
Sbjct: 88   VYIKL-EPPKREHIRGGEKVLSVYFSAVEFPIWILFFALGASSDKEVVNLIDCDGEDSRI 146

Query: 2720 XXXLMASIHEVDKNCEDFRKGKKALAYVDRLIKSCKFPPQESVEQCIKEYLFPNLSGFKQ 2541
               L+ASI++ D+NC+ FR+G+ A+  + + I++CKFPPQES+E  +  YLFPNLSGF+Q
Sbjct: 147  VNVLIASIYDADENCKGFRRGRNAINDIMKKIENCKFPPQESIEAFLSNYLFPNLSGFRQ 206

Query: 2540 KARFLGYMVKCLLHSFIGRRKVDNRDDFRNKXXXXXXXXXXXXXXAHIKHAERRMVKAMQ 2361
            KARFLGYMVKCLL ++ GRRK+DNRDDFRNK               H+KHAERRMVKAMQ
Sbjct: 207  KARFLGYMVKCLLQAYTGRRKIDNRDDFRNKRLELAGELLERELRVHVKHAERRMVKAMQ 266

Query: 2360 RDLYGDRQVQPIEHYLDASIITNGLSRAFSTGHWCHAYKRMERVSGVVATLRRTNPLQMT 2181
            RDLYG+R +  IEHYLDASIITNGLSRAFSTG W H YK+MER+SGVVATLRRTNPLQ  
Sbjct: 267  RDLYGERVIHAIEHYLDASIITNGLSRAFSTGAWSHPYKKMERISGVVATLRRTNPLQTI 326

Query: 2180 ADMRKMRQQVTYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTTILKP 2001
            ADMRK RQQV+YTGKVGDARYPHPSHWGK+CFLSTPDGENCGLVKNLA  GLVST I + 
Sbjct: 327  ADMRKTRQQVSYTGKVGDARYPHPSHWGKICFLSTPDGENCGLVKNLAITGLVSTNIEEH 386

Query: 2000 LLETLFRCGMQKLVDDSATSLHGKQKVLLDGEWVGVCEDSALFVSKLRRKRRRNEVPHQV 1821
             L+ L   GM+KLVDD++T L GK KV LDG WVGVC DS  FV+ LRRKRRR EVPHQV
Sbjct: 387  FLDKLLDSGMEKLVDDTSTLLSGKVKVFLDGNWVGVCGDSVSFVAALRRKRRRKEVPHQV 446

Query: 1820 EVKRDELQGEIRIFSDAGRILRPLLVVSNLKKIKALKGGDYGFQALLDNXXXXXXXXXXX 1641
            E+KRDE   E+R+FSDAGRILRPLLVV NL KIKA KGGDY FQ+LLD            
Sbjct: 447  EIKRDEQHREVRVFSDAGRILRPLLVVENLGKIKASKGGDYSFQSLLDKGVIEFIGTEEE 506

Query: 1640 EDCRTAWGVEYILKADKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKH 1461
            EDCRTAWG+ Y+   ++     KYTHCELDMSFLLGLS  IIPFANHDHARRVLYQSEKH
Sbjct: 507  EDCRTAWGINYLFMENEAKATVKYTHCELDMSFLLGLSAAIIPFANHDHARRVLYQSEKH 566

Query: 1460 SQQAIGFSTVNPNNRVDTNTHQLYYPQRPLFRTMLSDSLGKPKNARHQKGMLPRPEYYNG 1281
            SQQA+GF+T NPN RVDTNTHQLYYPQRPLFRTM+SD LGKP       G++PR EY+NG
Sbjct: 567  SQQAMGFNTTNPNIRVDTNTHQLYYPQRPLFRTMVSDCLGKPGYPLGHNGIVPRAEYFNG 626

Query: 1280 QCAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHVRSYKAEVDNKEAVAKKLKVEDSVN 1101
            QCAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEH+RSYKA+VDNKE+V KK K EDSVN
Sbjct: 627  QCAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKADVDNKESVGKKPKFEDSVN 686

Query: 1100 FGKTQSKIGRVDSLDDDGFPFIGANLQSGDIIIGKFAESGADHSVKLKHTERGMVQKVLL 921
            FGK QSKIGRVDSLDDDGFPFIGANLQ+GDI++G+ AESGADHS+KLKHTERGMVQKV+L
Sbjct: 687  FGKVQSKIGRVDSLDDDGFPFIGANLQNGDIVVGRCAESGADHSIKLKHTERGMVQKVVL 746

Query: 920  SANDEGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTVQGIVPDIVINP 741
            SANDEGKNFAVVSLRQVR+PCLGDKFSSMHGQKGVLGFLESQENFPFT+QGIVPDIV+NP
Sbjct: 747  SANDEGKNFAVVSLRQVRTPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVVNP 806

Query: 740  HAFPSRQTPGQXXXXXXXXXXXXXXXXXXATPFSTLSVDAIMEQLHGRGFSRWGNERVYN 561
            HAFPSRQTPGQ                  ATPFSTLSVDA+ +QLH  GFSRWG+ERVYN
Sbjct: 807  HAFPSRQTPGQLLEAALGKGIACGGLQKYATPFSTLSVDAVTDQLHRAGFSRWGSERVYN 866

Query: 560  GRTGEMVNSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEME 381
            GRTGEM++SL+FMGPTFYQRL HM+EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEME
Sbjct: 867  GRTGEMIHSLVFMGPTFYQRLTHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEME 926

Query: 380  RDCLIAHGAAANLHERLFTLSDSSQMHICGKCKNMANVIQRSVQGG-KVRGPFCRFCESV 204
            RDCLIAHGAAANLHERLFTLSDSSQMHIC KC N+ANVIQR+V GG K+RGP+CRFCESV
Sbjct: 927  RDCLIAHGAAANLHERLFTLSDSSQMHICRKCNNIANVIQRAVPGGRKIRGPYCRFCESV 986

Query: 203  EDIVKVNVPYGAKLLCQELFSMGISLKFDTEI 108
            E+IV+VNVPYGAKLL QELFSMGI++KFDTE+
Sbjct: 987  EEIVRVNVPYGAKLLAQELFSMGITMKFDTEL 1018


>emb|CBI21137.3| unnamed protein product [Vitis vinifera]
          Length = 1220

 Score = 1510 bits (3910), Expect = 0.0
 Identities = 747/997 (74%), Positives = 832/997 (83%), Gaps = 6/997 (0%)
 Frame = -2

Query: 3077 LCWMNGVDNPDCEFDHGGYFIVKGAEKTFIAQEQICLKRLWVYNNPTWMVGYRPGDKRKR 2898
            LCWMNGV+  DCE+DHGGYF++KGAEKTFIAQEQICLKRLWV +NPTWMV YRP  KRKR
Sbjct: 240  LCWMNGVERGDCEYDHGGYFLIKGAEKTFIAQEQICLKRLWVSSNPTWMVAYRPIWKRKR 299

Query: 2897 IYIKLTETLKLEHIKGGEKALSVYFLA-EMPIWILFFALGVSSDRXXXXXXXXXXXXXXX 2721
            +Y+KL E  K E+ +GGEK L+VYF + E+PIWILFFALG SSD+               
Sbjct: 300  VYVKL-EPPKDENNRGGEKVLTVYFSSTEIPIWILFFALGASSDKEVVDLIDFNIDDAGI 358

Query: 2720 XXXLMASIHEVDKNCED----FRKGKKALAYVDRLIKSCKFPPQESVEQCIKEYLFPNLS 2553
               L+ASIHE D+  E     FR+   A+++VD+L+KSCKFPP ES+++CI +YLFPN S
Sbjct: 359  SNILVASIHEADREAEKKGMYFRRQGNAISFVDKLVKSCKFPPGESIQECISKYLFPNFS 418

Query: 2552 GFKQKARFLGYMVKCLLHSFIGRRKVDNRDDFRNKXXXXXXXXXXXXXXAHIKHAERRMV 2373
            G KQKARFLGYMVKCLL ++ GRRK DNRDDFRNK               HI+HAERRMV
Sbjct: 419  GVKQKARFLGYMVKCLLQAYTGRRKCDNRDDFRNKRLELAGELLERELRVHIRHAERRMV 478

Query: 2372 KAMQRDLYGDRQVQPIEHYLDASIITNGLSRAFSTGHWCHAYKRMERVSGVVATLRRTNP 2193
            KAMQR+LYGDR ++PIE+YLDASIITNGLSRAFSTG W H +KRMER+SGVVATLRRTNP
Sbjct: 479  KAMQRELYGDRDLRPIENYLDASIITNGLSRAFSTGQWSHPFKRMERISGVVATLRRTNP 538

Query: 2192 LQMTADMRKMRQQVTYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTT 2013
            LQMTADMRK RQQV YTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLA  GLVST 
Sbjct: 539  LQMTADMRKTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLAITGLVSTE 598

Query: 2012 ILKPLLETLFRCGMQKLVDDSATSLHGKQKVLLDGEWVGVCEDSALFVSKLRRKRRRNEV 1833
            +L PL++ LF CGM+KLVDD++T L GK KV LDG+WVGVCED   FV +LR KRR  E+
Sbjct: 599  VLDPLVDKLFDCGMEKLVDDTSTKLSGKNKVFLDGDWVGVCEDPISFVVELRTKRRHKEL 658

Query: 1832 PHQVEVKRDELQGEIRIFSDAGRILRPLLVVSNLKKIKALKGGDYGFQALLDNXXXXXXX 1653
            P QVE+KRDE QGE+RIFSDAGRILRPLLVV NLKK+K  KG D+ FQ+LLD        
Sbjct: 659  PQQVEIKRDEQQGEVRIFSDAGRILRPLLVVENLKKVKTFKGDDFTFQSLLDKGIVELIG 718

Query: 1652 XXXXEDCRTAWGVEYILKADKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQ 1473
                EDC TAWG++Y+LK   ++PP KYTHCELDMSFLLGLSCGIIP+ANHDHARRVLYQ
Sbjct: 719  AEEEEDCSTAWGIKYLLKG-HDDPPVKYTHCELDMSFLLGLSCGIIPYANHDHARRVLYQ 777

Query: 1472 SEKHSQQAIGFSTVNPNNRVDTNTHQLYYPQRPLFRTMLSDSLGKPKNARHQKGMLPRPE 1293
            SEKHSQQAIGFST NPN RVDT +HQLYYPQRPLFRTM+SD              LPRPE
Sbjct: 778  SEKHSQQAIGFSTTNPNIRVDTLSHQLYYPQRPLFRTMISD--------------LPRPE 823

Query: 1292 YYNGQCAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHVRSYKAEVDNKEAVAKKLKVE 1113
            Y+NGQ AIVAVNVHLGYNQEDSLVMNRASLERGMFRSEH+RSYK+EVDN E++ KK K E
Sbjct: 824  YFNGQIAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKSEVDNNESLDKKRKSE 883

Query: 1112 DSVNFGKTQSKIGRVDSLDDDGFPFIGANLQSGDIIIGKFAESGADHSVKLKHTERGMVQ 933
            DSV+FGK QSKIGRVDSLDDDGFPFIGANLQ+GDI+IG+ AESG DHS+KLKHTERGMVQ
Sbjct: 884  DSVHFGKMQSKIGRVDSLDDDGFPFIGANLQNGDIVIGRCAESGVDHSIKLKHTERGMVQ 943

Query: 932  KVLLSANDEGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTVQGIVPDI 753
            KV++SAND+GKNFAVVSLRQVR+PCLGDKFSSMHGQKGVLGFLESQENFPFT+QGIVPDI
Sbjct: 944  KVVVSANDDGKNFAVVSLRQVRTPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDI 1003

Query: 752  VINPHAFPSRQTPGQXXXXXXXXXXXXXXXXXXATPFSTLSVDAIMEQLHGRGFSRWGNE 573
            VINPHAFPSRQTPGQ                  ATPFSTLSVDAI +QLH  GFSRWG+E
Sbjct: 1004 VINPHAFPSRQTPGQLLEAALGKGIACGGLLRHATPFSTLSVDAIADQLHRAGFSRWGHE 1063

Query: 572  RVYNGRTGEMVNSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKF 393
            RVYNGRTGEM+ SLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPV+DRKRFGGIKF
Sbjct: 1064 RVYNGRTGEMLRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVSDRKRFGGIKF 1123

Query: 392  GEMERDCLIAHGAAANLHERLFTLSDSSQMHICGKCKNMANVIQRSVQGG-KVRGPFCRF 216
            GEMERDCLIAHGAAANLHERLFTLSDS+ MHIC +CKN++NVIQRSV GG KVRGP+CR+
Sbjct: 1124 GEMERDCLIAHGAAANLHERLFTLSDSAYMHICRRCKNISNVIQRSVAGGRKVRGPYCRY 1183

Query: 215  CESVEDIVKVNVPYGAKLLCQELFSMGISLKFDTEIC 105
            CES E+IVKVNVPYGAKLLCQELFSMGISLKF+T++C
Sbjct: 1184 CESSEEIVKVNVPYGAKLLCQELFSMGISLKFETQLC 1220


>ref|XP_006442883.1| hypothetical protein CICLE_v10018562mg [Citrus clementina]
            gi|568850178|ref|XP_006478802.1| PREDICTED: DNA-directed
            RNA polymerases IV and V subunit 2-like [Citrus sinensis]
            gi|557545145|gb|ESR56123.1| hypothetical protein
            CICLE_v10018562mg [Citrus clementina]
          Length = 1198

 Score = 1459 bits (3776), Expect = 0.0
 Identities = 720/999 (72%), Positives = 810/999 (81%), Gaps = 8/999 (0%)
 Frame = -2

Query: 3077 LCWMNGVDNPDCEFDHGGYFIVKGAEKTFIAQEQICLKRLWVYNNPTWMVGYRPGDKRKR 2898
            LCWM GV+  DC+FDHGGYFI+KGAEK F+AQEQICLKRLWV N+  W V Y+  +KR R
Sbjct: 202  LCWMKGVEKGDCDFDHGGYFIIKGAEKVFVAQEQICLKRLWVSNSMGWTVAYKSENKRNR 261

Query: 2897 IYIKLTETLKLEHIKGGEKALSVYFLA-EMPIWILFFALGVSSDRXXXXXXXXXXXXXXX 2721
            + ++L +  K E IKGGEK LSVYFL+ E+PIWILFFALGVSSD+               
Sbjct: 262  LIVRLVDMSKFEDIKGGEKVLSVYFLSTEIPIWILFFALGVSSDKEIVNLIDFTCEDCSI 321

Query: 2720 XXXLMASIHEVDKNCEDFRKGKKALAYVDRLIKSCKFPPQESVEQCIKEYLFPNLSGFKQ 2541
               L ASIH+ D  C++FRKG+ AL YVD+LIK   FPP ES E+C+  YLFP+L G KQ
Sbjct: 322  LNILFASIHDADNKCDEFRKGRNALKYVDKLIKGTTFPPGESTEECMNTYLFPSLHGTKQ 381

Query: 2540 KARFLGYMVKCLLHSFIGRRKVDNRDDFRNKXXXXXXXXXXXXXXAHIKHAERRMVKAMQ 2361
            KARFLGYMVKCLL ++ GRRK DNRDDFRNK               HI HA +RM KA+Q
Sbjct: 382  KARFLGYMVKCLLQAYSGRRKCDNRDDFRNKRLELAGELLERELKVHIAHARKRMAKALQ 441

Query: 2360 RDLYGDRQVQPIEHYLDASIITNGLSRAFSTGHWCHAYKRMERVSGVVATLRRTNPLQMT 2181
            RDLYGDR V+PIE+YLDASI+TNGLSRAFSTG W H +KR ER+SG+VA L R NPLQ  
Sbjct: 442  RDLYGDRTVRPIEYYLDASILTNGLSRAFSTGAWSHPFKRTERISGIVANLGRANPLQTL 501

Query: 2180 ADMRKMRQQVTYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTTILKP 2001
             D+R+ RQQV YTGKVGDARYPHPSHWGK+CFLSTPDGENCGLVKNL   GLVST+IL+P
Sbjct: 502  VDLRRTRQQVQYTGKVGDARYPHPSHWGKICFLSTPDGENCGLVKNLGVTGLVSTSILEP 561

Query: 2000 LLETLFRCGMQKLVDDSATSLHGKQKVLLDGEWVGVCEDSALFVSKLRRKRRRNEVPHQV 1821
            + E LF  GM+KL DD++ SL GK KV +DG+W+GVC+DS  FVS+LRRKRRR E+P QV
Sbjct: 562  IFEQLFNSGMEKLADDASYSLGGKFKVFVDGDWIGVCKDSLSFVSELRRKRRRKELPTQV 621

Query: 1820 EVKRDELQGEIRIFSDAGRILRPLLVVSNLKKIKALKGGDYGFQALLDNXXXXXXXXXXX 1641
            E+KRDELQ E+RIF DAGRILRPLLVV N+ KIK+L+G +Y FQALLD+           
Sbjct: 622  EIKRDELQSEVRIFMDAGRILRPLLVVENMGKIKSLEGKNYTFQALLDHGIIELVGTEEE 681

Query: 1640 EDCRTAWGVEYILKADKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKH 1461
            EDC TAWG++Y+LK  ++  P K+THCELDMSFLLGLSCGIIPFANHDHARRVLYQS+KH
Sbjct: 682  EDCCTAWGIKYLLKDIEDKKPIKFTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSQKH 741

Query: 1460 SQQAIGFSTVNPNNRVDTNTHQLYYPQRPLFRTMLSDSLGKPKNARHQKGMLPRPEYYNG 1281
            S QAIGF T NP+ RVDT +HQL+YPQRPLFRTM+SD LGKP    +   +LPRPE YNG
Sbjct: 742  SSQAIGFPTTNPSIRVDTLSHQLFYPQRPLFRTMISDCLGKPGYGHNH--ILPRPELYNG 799

Query: 1280 QCAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHVRSYKAEVDNKEAVAKKLKVEDSVN 1101
            Q AIVAVNVHLGYNQEDSLVMNRASLERGMFRSEH+RSYKAEVDNKE   K+   +D VN
Sbjct: 800  QNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKEMQVKRRSSDDMVN 859

Query: 1100 FGKTQSKIGRVDSLDDDGFPFIGANLQSGDIIIGKFAESGADHSVKLKHTERGMVQKVLL 921
            FGK QSKIGRVDSLDDDGFPFIGANLQ GDI+IGK+A+SGADHS+KLKHTERGMVQKV+L
Sbjct: 860  FGKIQSKIGRVDSLDDDGFPFIGANLQCGDIVIGKYADSGADHSIKLKHTERGMVQKVVL 919

Query: 920  SANDEGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTVQGIVPDIVINP 741
            S+ND+GKNF+VVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFT+QGIVPDIVINP
Sbjct: 920  SSNDDGKNFSVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINP 979

Query: 740  HAFPSRQTPGQ------XXXXXXXXXXXXXXXXXXATPFSTLSVDAIMEQLHGRGFSRWG 579
            HAFPSRQTPGQ                        ATPF+T SVDAI EQLH  GFS+WG
Sbjct: 980  HAFPSRQTPGQLLEAALGKGIAALGKGICSGLKRYATPFATPSVDAITEQLHRAGFSKWG 1039

Query: 578  NERVYNGRTGEMVNSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGI 399
             ER+Y+GRTGEMV SLIF+GPTFYQRLIHM+EDKVKFRNTGPVHPLTRQPVADRKRFGGI
Sbjct: 1040 TERLYDGRTGEMVRSLIFIGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGI 1099

Query: 398  KFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICGKCKNMANVIQRSVQGG-KVRGPFC 222
            KFGEMERDCLIAHGAAANLHERLFTLSDS QMHIC KCKN+ANVIQR V GG KVRGP+C
Sbjct: 1100 KFGEMERDCLIAHGAAANLHERLFTLSDSYQMHICRKCKNVANVIQRVVGGGRKVRGPYC 1159

Query: 221  RFCESVEDIVKVNVPYGAKLLCQELFSMGISLKFDTEIC 105
            R C+S +DIVK NVPYGAKLLCQELFSMGI+LKFDTE C
Sbjct: 1160 RICDSGDDIVKANVPYGAKLLCQELFSMGITLKFDTEFC 1198


>gb|EOY29336.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
          Length = 1184

 Score = 1456 bits (3770), Expect = 0.0
 Identities = 712/993 (71%), Positives = 805/993 (81%), Gaps = 2/993 (0%)
 Frame = -2

Query: 3077 LCWMNGVDNPDCEFDHGGYFIVKGAEKTFIAQEQICLKRLWVYNNPTWMVGYRPGDKRKR 2898
            LCWMN V+  DC+FDHGGYF++KG EK FIAQEQI +KRLW+ N+  W + YR   KR R
Sbjct: 192  LCWMNEVEKADCDFDHGGYFLIKGTEKIFIAQEQISMKRLWISNSQGWTIAYRSEVKRNR 251

Query: 2897 IYIKLTETLKLEHIKGGEKALSVYFLA-EMPIWILFFALGVSSDRXXXXXXXXXXXXXXX 2721
            + I+L E  K+E+IKGGEK L+VYFL+ E+P+W+LFFALGVSSD+               
Sbjct: 252  LIIRLVENSKVEYIKGGEKVLTVYFLSTEIPVWVLFFALGVSSDKEVVNLIDYESNDSSI 311

Query: 2720 XXXLMASIHEVDKNCEDFRKGKKALAYVDRLIKSCKFPPQESVEQCIKEYLFPNLSGFKQ 2541
               L ASI   D  C  F +G+ A+ YV +L+K  +FPP+E +E+C+  YLFP L  FKQ
Sbjct: 312  TNILFASIRNADGKCYKFCQGRNAIDYVGKLVKDTRFPPEEGIEECLSTYLFPTLRSFKQ 371

Query: 2540 KARFLGYMVKCLLHSFIGRRKVDNRDDFRNKXXXXXXXXXXXXXXAHIKHAERRMVKAMQ 2361
            KARFLGYMVKCLL ++ GR K DNRDDFRNK               HI HA RRM K +Q
Sbjct: 372  KARFLGYMVKCLLQAYTGRLKCDNRDDFRNKRLELAGELLERELKVHIAHARRRMAKTLQ 431

Query: 2360 RDLYGDRQVQPIEHYLDASIITNGLSRAFSTGHWCHAYKRMERVSGVVATLRRTNPLQMT 2181
            RDLY DR V+PIEHYLDASI+TNGLSRAFSTG W H YKRMER+SGVVA L R NPLQ  
Sbjct: 432  RDLYADRTVRPIEHYLDASIVTNGLSRAFSTGAWSHPYKRMERISGVVANLGRANPLQTM 491

Query: 2180 ADMRKMRQQVTYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTTILKP 2001
             D+RK RQQV YTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLA+ GLVST I++ 
Sbjct: 492  VDLRKTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLATTGLVSTNIMES 551

Query: 2000 LLETLFRCGMQKLVDDSATSLHGKQKVLLDGEWVGVCEDSALFVSKLRRKRRRNEVPHQV 1821
            +++ LF  GM++LV+D+ +SL GK KV L+GEWVGVCEDS  F +++RRKRR  E PHQV
Sbjct: 552  IVDKLFDSGMEELVNDTCSSLDGKDKVFLNGEWVGVCEDSLSFAAEVRRKRRSKEFPHQV 611

Query: 1820 EVKRDELQGEIRIFSDAGRILRPLLVVSNLKKIKALKGGDYGFQALLDNXXXXXXXXXXX 1641
            E+KRDE +GE+RIFSD GRILRPLLVV NL +IKA KG +Y FQALL+            
Sbjct: 612  EIKRDEHKGEVRIFSDGGRILRPLLVVDNLNRIKAFKGENYTFQALLEGGIIELVGTEEE 671

Query: 1640 EDCRTAWGVEYILKADKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKH 1461
            EDCRTAW ++Y+L   +   P KYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQ++KH
Sbjct: 672  EDCRTAWSIKYLLTDVEGKQPVKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKH 731

Query: 1460 SQQAIGFSTVNPNNRVDTNTHQLYYPQRPLFRTMLSDSLGKPKNARHQKGMLPRPEYYNG 1281
            SQQAIGFST NPN RVDT +HQLYYPQRPLFRTM SD LGK  +   QKG+LP+PE YNG
Sbjct: 732  SQQAIGFSTTNPNIRVDTLSHQLYYPQRPLFRTMTSDCLGKLGHPLGQKGVLPKPELYNG 791

Query: 1280 QCAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHVRSYKAEVDNKEAVAKKLKVEDSVN 1101
            Q AIVAVNVHLGYNQEDSLVMNR+SLERGMFRSEHVRSYKAEVDNKE   K+ K ED VN
Sbjct: 792  QNAIVAVNVHLGYNQEDSLVMNRSSLERGMFRSEHVRSYKAEVDNKEIQDKRRKSEDIVN 851

Query: 1100 FGKTQSKIGRVDSLDDDGFPFIGANLQSGDIIIGKFAESGADHSVKLKHTERGMVQKVLL 921
            FGK QSKIGRVDSLDDDGFP++GANLQ GDI+IG+ AESGADHS+KLKHTERGMVQKV+L
Sbjct: 852  FGKIQSKIGRVDSLDDDGFPYVGANLQCGDIVIGRCAESGADHSIKLKHTERGMVQKVVL 911

Query: 920  SANDEGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTVQGIVPDIVINP 741
            S+ND+GKN+AVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFT QGIVPDIVINP
Sbjct: 912  SSNDDGKNYAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTTQGIVPDIVINP 971

Query: 740  HAFPSRQTPGQXXXXXXXXXXXXXXXXXXATPFSTLSVDAIMEQLHGRGFSRWGNERVYN 561
            HAFPSRQTPGQ                  ATPFST+SVDAI EQLH  GFSRWGNERVYN
Sbjct: 972  HAFPSRQTPGQLLEAALGKGIACGGSMKYATPFSTISVDAITEQLHRAGFSRWGNERVYN 1031

Query: 560  GRTGEMVNSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEME 381
            GRTGEMV SLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKR+GGIKFGEME
Sbjct: 1032 GRTGEMVRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRYGGIKFGEME 1091

Query: 380  RDCLIAHGAAANLHERLFTLSDSSQMHICGKCKNMANVIQRSVQGG-KVRGPFCRFCESV 204
            RDCLIAHGA+ANLHERL TLSDSSQMH+C  CKN+ANVI+R+V GG K+RGP+CR C+SV
Sbjct: 1092 RDCLIAHGASANLHERLVTLSDSSQMHVCRNCKNVANVIERAVPGGRKIRGPYCRGCQSV 1151

Query: 203  EDIVKVNVPYGAKLLCQELFSMGISLKFDTEIC 105
            +DIV+VNVPYGAKLLCQELFSMGI+LKF+T++C
Sbjct: 1152 DDIVRVNVPYGAKLLCQELFSMGINLKFETQLC 1184


>gb|EMJ26641.1| hypothetical protein PRUPE_ppa000410mg [Prunus persica]
          Length = 1200

 Score = 1439 bits (3725), Expect = 0.0
 Identities = 717/997 (71%), Positives = 802/997 (80%), Gaps = 6/997 (0%)
 Frame = -2

Query: 3077 LCWMNGVDNPDCEFDHGGYFIVKGAEKTFIAQEQICLKRLWVYNNPTWMVGYRPGDKRKR 2898
            LCWM   +  DC+FDHGGYFI+KGAEKTFIAQEQ CLKRL + NN    V YR   KR R
Sbjct: 207  LCWMKDFEKGDCDFDHGGYFIIKGAEKTFIAQEQSCLKRLLITNNQGLTVAYRSEVKRHR 266

Query: 2897 IYIKLTETLKLEHIKGGEKALSVYFLA-EMPIWILFFALGVSSDRXXXXXXXXXXXXXXX 2721
            + I+L    KLE+I+G EK L+VYF++ E+P+WI FFALGVSSDR               
Sbjct: 267  LIIRLVGISKLENIEGVEKVLTVYFMSTEIPVWIWFFALGVSSDREVMNLIDYDSEDASI 326

Query: 2720 XXXLMASIHEVDKNCED----FRKGKKALAYVDRLIKSCKFPPQESVEQCIKEYLFPNLS 2553
               L ASI + DK  +     FR+GK AL YVD +I+   FPP ES+E+CI  YLFPNL 
Sbjct: 327  SNILFASIRDADKLNDKVDGGFRRGKNALKYVDEVIRKTAFPPGESMEECISLYLFPNLK 386

Query: 2552 GFKQKARFLGYMVKCLLHSFIGRRKVDNRDDFRNKXXXXXXXXXXXXXXAHIKHAERRMV 2373
            G KQKARFLGYMVK LL ++ GRRK DNRDDFRNK              AHI HA RRM 
Sbjct: 387  GLKQKARFLGYMVKSLLQAYAGRRKCDNRDDFRNKRLDLAGELLERELKAHIGHARRRMA 446

Query: 2372 KAMQRDLYGDRQVQPIEHYLDASIITNGLSRAFSTGHWCHAYKRMERVSGVVATLRRTNP 2193
            KA+QRDLYGDR V+PIEHYLDASI+TNG+SRAFSTG WCH +KRMER+SGVVAT+ R NP
Sbjct: 447  KALQRDLYGDRAVRPIEHYLDASIVTNGISRAFSTGAWCHPFKRMERMSGVVATVGRANP 506

Query: 2192 LQMTADMRKMRQQVTYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTT 2013
            LQ   DMRK RQQV YTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLA+ GLVST 
Sbjct: 507  LQTMVDMRKTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLATTGLVSTN 566

Query: 2012 ILKPLLETLFRCGMQKLVDDSATSLHGKQKVLLDGEWVGVCEDSALFVSKLRRKRRRNEV 1833
            +L+ L+  L  CGM+KLVDD+ TSL GK KV L+G+WVGVCEDS  FV +LRR RRR ++
Sbjct: 567  VLESLIPQLLTCGMEKLVDDTFTSLRGKDKVFLNGDWVGVCEDSLSFVLELRRMRRRKKL 626

Query: 1832 PHQVEVKRDELQGEIRIFSDAGRILRPLLVVSNLKKIKALKGGDYGFQALLDNXXXXXXX 1653
            PHQVE+KRD  QGE+RIFSDAGRILRPLLVV NL K+KA KGG   FQ  LDN       
Sbjct: 627  PHQVEIKRDVHQGEVRIFSDAGRILRPLLVVENLNKVKASKGGKSSFQYFLDNGIIELIG 686

Query: 1652 XXXXEDCRTAWGVEYILKADKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQ 1473
                EDC TAWG++Y+   DK     K+THCELDMSFLLGLSCGIIP+ANHDHARRVLYQ
Sbjct: 687  AEEEEDCSTAWGIKYLFMEDKGKSATKFTHCELDMSFLLGLSCGIIPYANHDHARRVLYQ 746

Query: 1472 SEKHSQQAIGFSTVNPNNRVDTNTHQLYYPQRPLFRTMLSDSLGKPKNARHQKGMLPRPE 1293
            ++KHSQQAIGFST NPN RVDT +HQL+YPQRPLF+TM SD LGKP   RH + ++P+PE
Sbjct: 747  AQKHSQQAIGFSTTNPNLRVDTLSHQLHYPQRPLFQTMTSDCLGKP--GRHNR-IVPKPE 803

Query: 1292 YYNGQCAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHVRSYKAEVDNKEAVAKKLKVE 1113
            YYNGQ AIVAVNVHLG+NQEDS+VMNRASLERGMFRSEH+RSYKAEVDNKE++ K+ K +
Sbjct: 804  YYNGQNAIVAVNVHLGFNQEDSIVMNRASLERGMFRSEHIRSYKAEVDNKESLDKRRKPD 863

Query: 1112 DSVNFGKTQSKIGRVDSLDDDGFPFIGANLQSGDIIIGKFAESGADHSVKLKHTERGMVQ 933
            D VNFGK QSK GRVDSLDDDGFP++GANLQSGDIIIG+ +ESGADHS+KLKHTERGMVQ
Sbjct: 864  DCVNFGKMQSKFGRVDSLDDDGFPYVGANLQSGDIIIGRCSESGADHSIKLKHTERGMVQ 923

Query: 932  KVLLSANDEGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTVQGIVPDI 753
            KVLLS+ND+GKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFT+QG+VPDI
Sbjct: 924  KVLLSSNDDGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGVVPDI 983

Query: 752  VINPHAFPSRQTPGQXXXXXXXXXXXXXXXXXXATPFSTLSVDAIMEQLHGRGFSRWGNE 573
            VINPHAFPSRQTPGQ                  ATPFSTLSVD I +QLH  GFSRWGNE
Sbjct: 984  VINPHAFPSRQTPGQLLEAALGKGIACGGSKRYATPFSTLSVDDITDQLHSAGFSRWGNE 1043

Query: 572  RVYNGRTGEMVNSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKF 393
            RVYNG TG MV SLIFMGPTFYQRLIHM+EDKVKFRNTGPVHPLTRQPVADRKRFGGIKF
Sbjct: 1044 RVYNGATGAMVRSLIFMGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKF 1103

Query: 392  GEMERDCLIAHGAAANLHERLFTLSDSSQMHICGKCKNMANVIQRSVQGG-KVRGPFCRF 216
            GEMERDCLIAHGA+ANLHERLFTLSDSSQMH+C KCKN+A VI R+V GG K+RGP CR 
Sbjct: 1104 GEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVAYVILRTVAGGRKIRGPHCRI 1163

Query: 215  CESVEDIVKVNVPYGAKLLCQELFSMGISLKFDTEIC 105
            C+S +D+V+VNVPYGAKLLCQELFSMGISLKF+T  C
Sbjct: 1164 CDSADDLVRVNVPYGAKLLCQELFSMGISLKFETRFC 1200


>ref|XP_002324332.2| DNA-directed RNA polymerase family protein [Populus trichocarpa]
            gi|550317882|gb|EEF02897.2| DNA-directed RNA polymerase
            family protein [Populus trichocarpa]
          Length = 1181

 Score = 1438 bits (3723), Expect = 0.0
 Identities = 710/992 (71%), Positives = 797/992 (80%), Gaps = 2/992 (0%)
 Frame = -2

Query: 3077 LCWMNGVDNPDCEFDHGGYFIVKGAEKTFIAQEQICLKRLWVYNNPTWMVGYRPGDKRKR 2898
            LCW+  V+  DC+FDHGGYF++KGAEK FIAQEQIC+KRLW+ N+  W V Y+   KR R
Sbjct: 200  LCWLTTVEKGDCDFDHGGYFLIKGAEKVFIAQEQICMKRLWISNSQGWTVSYKSEVKRNR 259

Query: 2897 IYIKLTETLKLEHIKGGEKALSVYFLA-EMPIWILFFALGVSSDRXXXXXXXXXXXXXXX 2721
            + ++L E  KLE+IKG +K L VYFL+ E+P+WILFFALGV SD+               
Sbjct: 260  LIVRLVELSKLEYIKGEKKGLCVYFLSTEIPLWILFFALGVRSDKEVIDLIDYASNDASI 319

Query: 2720 XXXLMASIHEVDKNCEDFRKGKKALAYVDRLIKSCKFPPQESVEQCIKEYLFPNLSGFKQ 2541
                 ASIH+ D+ CE FR+  +AL YVD+L+K  +FPP+ES+E  I  YLFP L+  + 
Sbjct: 320  VNIFFASIHDADEKCEHFRREDRALDYVDKLLKKTRFPPKESIEDAISAYLFPRLNSRRH 379

Query: 2540 KARFLGYMVKCLLHSFIGRRKVDNRDDFRNKXXXXXXXXXXXXXXAHIKHAERRMVKAMQ 2361
            KARFLGYMVKCLL ++ G RK DNRD FRNK               H+ HA RRM KA+Q
Sbjct: 380  KARFLGYMVKCLLEAYTGHRKCDNRDSFRNKRFELASELLERELKVHVSHALRRMTKALQ 439

Query: 2360 RDLYGDRQVQPIEHYLDASIITNGLSRAFSTGHWCHAYKRMERVSGVVATLRRTNPLQMT 2181
            RDLYGDR V PIEHYLDASI+TNGL+RAFSTG WCH +K MERVSGVV  L R NPLQ  
Sbjct: 440  RDLYGDRDVHPIEHYLDASIVTNGLTRAFSTGAWCHPFKWMERVSGVVGNLGRANPLQTM 499

Query: 2180 ADMRKMRQQVTYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTTILKP 2001
             D+RK RQQV YTGKVGDARYPHPSHWG+VCFLSTPDGENCGLVKNLA  G+VST I + 
Sbjct: 500  IDLRKTRQQVLYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLVKNLAVTGVVSTNISES 559

Query: 2000 LLETLFRCGMQKLVDDSATSLHGKQKVLLDGEWVGVCEDSALFVSKLRRKRRRNEVPHQV 1821
            L++ LF  GM+KLVDD+ T L GK KV L+GEWVGVCEDS LFV +LR  RRR E+P+QV
Sbjct: 560  LVDKLFDSGMEKLVDDTYTKLDGKHKVFLNGEWVGVCEDSCLFVGELRSMRRRRELPYQV 619

Query: 1820 EVKRDELQGEIRIFSDAGRILRPLLVVSNLKKIKALKGGDYGFQALLDNXXXXXXXXXXX 1641
            E+KRDE Q E+RIFSDAGRILRPLLVV NL KIKA KGG+Y F +LLD            
Sbjct: 620  EIKRDEQQREVRIFSDAGRILRPLLVVENLDKIKAFKGGNYIFTSLLDKGIIEFIGTEEE 679

Query: 1640 EDCRTAWGVEYILKADKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKH 1461
            EDC TAWG++++L   +   P KY+HCELDMSFLLGLSCGIIPFANHDHARRVLYQ++KH
Sbjct: 680  EDCCTAWGIKFLLADIEGKQPMKYSHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKH 739

Query: 1460 SQQAIGFSTVNPNNRVDTNTHQLYYPQRPLFRTMLSDSLGKPKNARHQKGMLPRPEYYNG 1281
            SQQAIGFST NPN RVDT +HQL+YPQRPLFRTM+SD L           +LP+PE +NG
Sbjct: 740  SQQAIGFSTTNPNIRVDTLSHQLHYPQRPLFRTMISDCL-----------VLPKPELFNG 788

Query: 1280 QCAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHVRSYKAEVDNKEAVAKKLKVEDSVN 1101
            Q AIVAVNVHLGYNQEDSLVMNRASLERGMFRSEH+RSYKAEVDNKE   K+ K EDS+ 
Sbjct: 789  QNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKELTDKRRKSEDSIT 848

Query: 1100 FGKTQSKIGRVDSLDDDGFPFIGANLQSGDIIIGKFAESGADHSVKLKHTERGMVQKVLL 921
            FGK QSKIGRVDSLDDDGFPFIGAN+QSGDI+IGK AESGADHSVKLKHTERGMVQKV+L
Sbjct: 849  FGKIQSKIGRVDSLDDDGFPFIGANMQSGDIVIGKCAESGADHSVKLKHTERGMVQKVVL 908

Query: 920  SANDEGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTVQGIVPDIVINP 741
            S+NDEGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFT+QG+VPDIVINP
Sbjct: 909  SSNDEGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGVVPDIVINP 968

Query: 740  HAFPSRQTPGQXXXXXXXXXXXXXXXXXXATPFSTLSVDAIMEQLHGRGFSRWGNERVYN 561
            HAFPSRQTPGQ                  ATPFSTLSVD I++QLH   FSRWGNERVYN
Sbjct: 969  HAFPSRQTPGQLLEAALGKGIACGGSKRYATPFSTLSVDDIIDQLHRAKFSRWGNERVYN 1028

Query: 560  GRTGEMVNSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEME 381
            GRTGEMV SLIFMGPTFYQRL+HMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEME
Sbjct: 1029 GRTGEMVRSLIFMGPTFYQRLVHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEME 1088

Query: 380  RDCLIAHGAAANLHERLFTLSDSSQMHICGKCKNMANVIQRSVQGG-KVRGPFCRFCESV 204
            RDCLIAHGA+ANLHERLFTLSDSS+MHIC KCKN+ANVIQR V GG K+RGP+CR CESV
Sbjct: 1089 RDCLIAHGASANLHERLFTLSDSSEMHICQKCKNVANVIQRGVPGGRKIRGPYCRVCESV 1148

Query: 203  EDIVKVNVPYGAKLLCQELFSMGISLKFDTEI 108
            +D+VKV+VPYGAKLLCQELFSMGISLKFDT +
Sbjct: 1149 DDLVKVSVPYGAKLLCQELFSMGISLKFDTRV 1180


>ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putative [Ricinus communis]
            gi|223545372|gb|EEF46877.1| DNA-directed RNA polymerase
            subunit, putative [Ricinus communis]
          Length = 1203

 Score = 1417 bits (3667), Expect = 0.0
 Identities = 703/993 (70%), Positives = 792/993 (79%), Gaps = 2/993 (0%)
 Frame = -2

Query: 3077 LCWMNGVDNPDCEFDHGGYFIVKGAEKTFIAQEQICLKRLWVYNNPTWMVGYRPGDKRKR 2898
            LCWM   +  DC+FDHGGYF++KGAEK FIAQEQICLKRLW+ N   W V Y+   KR R
Sbjct: 212  LCWMKTAEKGDCDFDHGGYFLIKGAEKVFIAQEQICLKRLWISNIQGWTVSYKSEIKRNR 271

Query: 2897 IYIKLTETLKLEHIKGGEKALSVYFLA-EMPIWILFFALGVSSDRXXXXXXXXXXXXXXX 2721
            + ++L     LE +K  +K L+VYFL+ E+P+WILFFALGV+SD+               
Sbjct: 272  LIVRLVGLSALEDVKAEKKCLTVYFLSTEIPLWILFFALGVTSDKEVIDLIGYGSNDARI 331

Query: 2720 XXXLMASIHEVDKNCEDFRKGKKALAYVDRLIKSCKFPPQESVEQCIKEYLFPNLSGFKQ 2541
                 ASIH+ D+  E FR+GK+AL YV R I+  +FPP E+ E     YLFP L   +Q
Sbjct: 332  VNIFFASIHDADEKTEGFRRGKEALEYVVRQIRGTRFPPGEN-EDFFLLYLFPTLHSLRQ 390

Query: 2540 KARFLGYMVKCLLHSFIGRRKVDNRDDFRNKXXXXXXXXXXXXXXAHIKHAERRMVKAMQ 2361
            KARFLGYMVKCLL ++ G+RK +N D FRNK               HI HA RRM KA+Q
Sbjct: 391  KARFLGYMVKCLLQAYNGQRKCNNWDSFRNKRFELAKELLERELKVHIAHARRRMAKALQ 450

Query: 2360 RDLYGDRQVQPIEHYLDASIITNGLSRAFSTGHWCHAYKRMERVSGVVATLRRTNPLQMT 2181
            +DLYGDR V+PIEHYLDASI+TNGLSRAFSTG W H YKRMER+SGVVA L R NPLQ  
Sbjct: 451  KDLYGDRDVRPIEHYLDASIVTNGLSRAFSTGAWSHPYKRMERISGVVANLGRANPLQTM 510

Query: 2180 ADMRKMRQQVTYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTTILKP 2001
             D+RK R  V YTGKVGDAR+PHPSHWG+VCFLSTPDGENCGLVKNLA+ GLVS  IL+P
Sbjct: 511  VDLRKTRYHVQYTGKVGDARFPHPSHWGRVCFLSTPDGENCGLVKNLATTGLVSVNILEP 570

Query: 2000 LLETLFRCGMQKLVDDSATSLHGKQKVLLDGEWVGVCEDSALFVSKLRRKRRRNEVPHQV 1821
            L++ L   GM+K+ +DS + L  K KV L+GEWVGVCEDS LFV++LRR RRR ++P QV
Sbjct: 571  LIDKLIARGMEKVPEDSHSDLDEKDKVFLNGEWVGVCEDSRLFVAELRRLRRRKKLPQQV 630

Query: 1820 EVKRDELQGEIRIFSDAGRILRPLLVVSNLKKIKALKGGDYGFQALLDNXXXXXXXXXXX 1641
            E+KRDE Q E+RIFSDAGRILRPLLVV NL KI+A KGG+  FQ+LLD            
Sbjct: 631  EIKRDEQQQEVRIFSDAGRILRPLLVVQNLHKIEAFKGGNCTFQSLLDKGIIEFVGTEEE 690

Query: 1640 EDCRTAWGVEYILKADKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKH 1461
            EDC TAWG++++L         KYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQ++KH
Sbjct: 691  EDCSTAWGIKFLLSGVDGKQSLKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKH 750

Query: 1460 SQQAIGFSTVNPNNRVDTNTHQLYYPQRPLFRTMLSDSLGKPKNARHQKGMLPRPEYYNG 1281
            SQQAIGF T NPN RVDT +HQLYYPQRPLFRT+ SD LGKP + R   G++P+PE YNG
Sbjct: 751  SQQAIGFPTTNPNIRVDTLSHQLYYPQRPLFRTVTSDCLGKPGDTRGHNGIVPKPELYNG 810

Query: 1280 QCAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHVRSYKAEVDNKEAVAKKLKVEDSVN 1101
            Q AIVAVNVHLGYNQEDSLVMNRASLERGMFRSEH+RSYKA+VDNKE + K+ K +D+VN
Sbjct: 811  QNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKADVDNKELLDKRRKYDDNVN 870

Query: 1100 FGKTQSKIGRVDSLDDDGFPFIGANLQSGDIIIGKFAESGADHSVKLKHTERGMVQKVLL 921
            FGK  SKIGRVDSLDDDGFPFIGANLQSGDI+IG+ AESG DHS+KLKHTERGMVQKV+L
Sbjct: 871  FGKIPSKIGRVDSLDDDGFPFIGANLQSGDIVIGRCAESGPDHSIKLKHTERGMVQKVVL 930

Query: 920  SANDEGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTVQGIVPDIVINP 741
            S+NDEGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFT QGIVPDIVINP
Sbjct: 931  SSNDEGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTRQGIVPDIVINP 990

Query: 740  HAFPSRQTPGQXXXXXXXXXXXXXXXXXXATPFSTLSVDAIMEQLHGRGFSRWGNERVYN 561
            H+FPSRQTPGQ                  ATPFSTLSV+AI  QLH  GFSRWGNERVYN
Sbjct: 991  HSFPSRQTPGQLLEAALGKGIACGGSMKYATPFSTLSVEAITNQLHRAGFSRWGNERVYN 1050

Query: 560  GRTGEMVNSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEME 381
            GRTGEMV SLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEME
Sbjct: 1051 GRTGEMVRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEME 1110

Query: 380  RDCLIAHGAAANLHERLFTLSDSSQMHICGKCKNMANVIQRSVQGG-KVRGPFCRFCESV 204
            RDCLIAHGA+ANLHERLFTLSDSSQMHIC KCKN+ANVIQR+V GG K+RGP+CR CESV
Sbjct: 1111 RDCLIAHGASANLHERLFTLSDSSQMHICQKCKNVANVIQRAVPGGRKIRGPYCRVCESV 1170

Query: 203  EDIVKVNVPYGAKLLCQELFSMGISLKFDTEIC 105
            ++IVKVNVPYGAKLLCQELFSMGISLKF+T +C
Sbjct: 1171 DEIVKVNVPYGAKLLCQELFSMGISLKFETRLC 1203


>ref|XP_004145500.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Cucumis
            sativus]
          Length = 1197

 Score = 1416 bits (3665), Expect = 0.0
 Identities = 698/995 (70%), Positives = 795/995 (79%), Gaps = 4/995 (0%)
 Frame = -2

Query: 3077 LCWMNGVDNPDCEFDHGGYFIVKGAEKTFIAQEQICLKRLWVYNNPTWMVGYRPGDKRKR 2898
            LCWM      DCEFD GGYF++KGAEK FIAQEQICL+RLW+ N   W V YR   KR R
Sbjct: 206  LCWMKDGQKRDCEFDRGGYFLIKGAEKIFIAQEQICLRRLWISNVQGWTVAYRSEVKRNR 265

Query: 2897 IYIKLTETLKLEHIKGGEKALSVYFLA-EMPIWILFFALGVSSDRXXXXXXXXXXXXXXX 2721
            + I+L E  K E +K  EK L+VYFL+ E+P+WILFFALGVSSD+               
Sbjct: 266  LIIRLVENSKSEDLKSKEKVLNVYFLSTEVPVWILFFALGVSSDKEIVDLIDYGRDDPTV 325

Query: 2720 XXXLMASIHEVDKN--CEDFRKGKKALAYVDRLIKSCKFPPQESVEQCIKEYLFPNLSGF 2547
               L AS+ EVD +   +DFR+GK+AL ++D  I+   FPP + +E C+  YLF +L G 
Sbjct: 326  LNILFASVREVDNDDKWKDFRRGKRALTFLDNEIRKTSFPPADKIEDCLNLYLFASLKGS 385

Query: 2546 KQKARFLGYMVKCLLHSFIGRRKVDNRDDFRNKXXXXXXXXXXXXXXAHIKHAERRMVKA 2367
            KQK  FLGYMVKCLL ++ GRRK DNRDDFRNK               HI HA RRM KA
Sbjct: 386  KQKCHFLGYMVKCLLQAYTGRRKCDNRDDFRNKRFELAAELLERELKVHIAHARRRMEKA 445

Query: 2366 MQRDLYGDRQVQPIEHYLDASIITNGLSRAFSTGHWCHAYKRMERVSGVVATLRRTNPLQ 2187
            +QRDLYGDRQV PIEHYLDASIITNGLSRAFSTG W HA+KRMER+SGVVATL R NPLQ
Sbjct: 446  LQRDLYGDRQVHPIEHYLDASIITNGLSRAFSTGAWAHAFKRMERISGVVATLGRANPLQ 505

Query: 2186 MTADMRKMRQQVTYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTTIL 2007
              A++R+ RQQV YTGKVGDARYPHPSHWG+VCFLSTPDGENCGL+KNL+  GLVS    
Sbjct: 506  TMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLIKNLSGTGLVSLNTK 565

Query: 2006 KPLLETLFRCGMQKLVDDSATSLHGKQKVLLDGEWVGVCEDSALFVSKLRRKRRRNEVPH 1827
            K +  TLFRCGM+ LVD+++TS  GK ++ LDGEWVGVCEDS  FV+ +RRKRRRN   H
Sbjct: 566  KSITPTLFRCGMENLVDNTSTSFCGKYRIFLDGEWVGVCEDSLSFVTNVRRKRRRNPFLH 625

Query: 1826 QVEVKRDELQGEIRIFSDAGRILRPLLVVSNLKKIKALKGGDYGFQALLDNXXXXXXXXX 1647
            QVEVKRDE   E+RIFSDAGRILRPLLVV NL +I   KG +Y FQ+LLD          
Sbjct: 626  QVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNRIDKSKGENYTFQSLLDKGIIELIGTE 685

Query: 1646 XXEDCRTAWGVEYILKADKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSE 1467
              EDCR AW ++++++   +    KY+HCELDMSFLLGLSCG++PFANHDHARR L+QS+
Sbjct: 686  EEEDCRVAWSIKHLME---DEGTTKYSHCELDMSFLLGLSCGLVPFANHDHARRALFQSQ 742

Query: 1466 KHSQQAIGFSTVNPNNRVDTNTHQLYYPQRPLFRTMLSDSLGKPKNARHQKGMLPRPEYY 1287
            KHS QAIGFS  N N RVDT +HQL+YPQRPLFRTM +D LG P       G+LP+PE+Y
Sbjct: 743  KHSNQAIGFSPTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHAGILPKPEFY 802

Query: 1286 NGQCAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHVRSYKAEVDNKEAVAKKLKVEDS 1107
            NGQ AIVAVNVHLGYNQEDSLVMNRASLERGMFRSEH+RSYKAEVDNKE+  K+ K +D+
Sbjct: 803  NGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDA 862

Query: 1106 VNFGKTQSKIGRVDSLDDDGFPFIGANLQSGDIIIGKFAESGADHSVKLKHTERGMVQKV 927
            +NFGKTQSKIGRVDSLDDDGFP+IGANLQSGDI+IG+ AESGADHS+KLKHTE+GMVQKV
Sbjct: 863  INFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAESGADHSIKLKHTEKGMVQKV 922

Query: 926  LLSANDEGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTVQGIVPDIVI 747
            +LS+ND+GKN+AVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFT+QGIVPDIVI
Sbjct: 923  VLSSNDDGKNYAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVI 982

Query: 746  NPHAFPSRQTPGQXXXXXXXXXXXXXXXXXXATPFSTLSVDAIMEQLHGRGFSRWGNERV 567
            NPHAFPSRQTPGQ                  ATPFST SVDAI +QLH  GFSRWG+ERV
Sbjct: 983  NPHAFPSRQTPGQLLEAALGKGIAAGGSLKYATPFSTPSVDAITDQLHRAGFSRWGSERV 1042

Query: 566  YNGRTGEMVNSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGE 387
            YNGRTGEM+ SLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGE
Sbjct: 1043 YNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGE 1102

Query: 386  MERDCLIAHGAAANLHERLFTLSDSSQMHICGKCKNMANVIQRSVQGG-KVRGPFCRFCE 210
            MERDCLIAHGA+ANLHERLFTLSDSSQMH+C KCKN+A+VIQRSV GG K+RGP+CR CE
Sbjct: 1103 MERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQRSVAGGRKMRGPYCRVCE 1162

Query: 209  SVEDIVKVNVPYGAKLLCQELFSMGISLKFDTEIC 105
            S +DIV+VNVPYGAKLLCQELFSMGI+LKF+T++C
Sbjct: 1163 SFDDIVRVNVPYGAKLLCQELFSMGINLKFETQLC 1197


>ref|XP_004501385.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Cicer
            arietinum]
          Length = 1199

 Score = 1411 bits (3652), Expect = 0.0
 Identities = 698/993 (70%), Positives = 791/993 (79%), Gaps = 2/993 (0%)
 Frame = -2

Query: 3077 LCWMNGVDNPDCEFDHGGYFIVKGAEKTFIAQEQICLKRLWVYNNPTWMVGYRPGDKRKR 2898
            LCWMNGV+  DCEFDHGGYF++KGAEK FIAQEQI LKRLWV N P W V Y+   KR R
Sbjct: 209  LCWMNGVEKGDCEFDHGGYFLIKGAEKIFIAQEQIFLKRLWVTNVPYWAVAYKSQMKRNR 268

Query: 2897 IYIKLTETLKLEHIKGGEKALSVYFLA-EMPIWILFFALGVSSDRXXXXXXXXXXXXXXX 2721
            + +KL E   +E IK GEK L+VYFL+ E+P+W+LFFALGV+SD+               
Sbjct: 269  MVVKLVENTTVEGIKNGEKVLTVYFLSVEIPVWLLFFALGVTSDKQIVDLIDYGEGDGRI 328

Query: 2720 XXXLMASIHEVDKNCEDFRKGKKALAYVDRLIKSCKFPPQESVEQCIKEYLFPNLSGFKQ 2541
               L ASI E D+ CE FR+GK AL Y++  +K  +FPP ES+++C+  Y+FPN+ G  +
Sbjct: 329  QNILFASIREADEKCEQFRRGKNALLYIEERVKGVQFPPPESIDECLNMYVFPNIKGLNR 388

Query: 2540 KARFLGYMVKCLLHSFIGRRKVDNRDDFRNKXXXXXXXXXXXXXXAHIKHAERRMVKAMQ 2361
            KAR+L YMVK LL ++ GRRK DNRDDFRNK               HI HA +RM KA+Q
Sbjct: 389  KARYLAYMVKVLLLAYTGRRKTDNRDDFRNKRLELAGELLERELKVHIAHARKRMAKALQ 448

Query: 2360 RDLYGDRQVQPIEHYLDASIITNGLSRAFSTGHWCHAYKRMERVSGVVATLRRTNPLQMT 2181
            RDLYGDR V  IEHYLDASIITNGL RAFSTG W H YKRMER+SGVVATL RTNPLQ  
Sbjct: 449  RDLYGDRDVHQIEHYLDASIITNGLQRAFSTGAWTHPYKRMERISGVVATLGRTNPLQTM 508

Query: 2180 ADMRKMRQQVTYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTTILKP 2001
            A++R+ RQQV YTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKN+A  GLVST + + 
Sbjct: 509  AELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNMAVTGLVSTNVTES 568

Query: 2000 LLETLFRCGMQKLVDDSATSLHGKQKVLLDGEWVGVCEDSALFVSKLRRKRRRNEVPHQV 1821
            +L  LF CGM++LVDD+   L  K KV L+G+WVGVC DSA FV++LR +RR+NE+PHQV
Sbjct: 569  ILPQLFACGMEELVDDTTAVLGNKDKVFLNGDWVGVCSDSASFVAELRNRRRKNELPHQV 628

Query: 1820 EVKRDELQGEIRIFSDAGRILRPLLVVSNLKKIKALKGGDYGFQALLDNXXXXXXXXXXX 1641
            E+KRD  Q E+RI SDAGRILRPLLVVSNL KIK  K     FQ+LLDN           
Sbjct: 629  EIKRDPSQEEVRILSDAGRILRPLLVVSNLLKIKGSKSDPKSFQSLLDNGLIELIGPEEE 688

Query: 1640 EDCRTAWGVEYILKADKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKH 1461
            EDC+TAWGV Y+   + ++   KYTHCELDMSFLLGLSC ++PFANHDHARRVLYQS+KH
Sbjct: 689  EDCKTAWGVPYLFGKEGKS-SVKYTHCELDMSFLLGLSCSLVPFANHDHARRVLYQSQKH 747

Query: 1460 SQQAIGFSTVNPNNRVDTNTHQLYYPQRPLFRTMLSDSLGKPKNARHQKGMLPRPEYYNG 1281
            S QAIGFST NP+ RVD  +HQL+YPQ+PLF+TM SD LGKP      K +LP+ E+YNG
Sbjct: 748  SSQAIGFSTTNPDIRVDALSHQLFYPQKPLFQTMTSDCLGKPGYLGPSK-LLPKSEFYNG 806

Query: 1280 QCAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHVRSYKAEVDNKEAVAKKLKVEDSVN 1101
            Q AIVAVNVHLGYNQEDSLVMNRASL+RGMFRSEH+RSYKAE +NKE+  KK K ED VN
Sbjct: 807  QNAIVAVNVHLGYNQEDSLVMNRASLQRGMFRSEHIRSYKAENENKESTEKKRKPEDIVN 866

Query: 1100 FGKTQSKIGRVDSLDDDGFPFIGANLQSGDIIIGKFAESGADHSVKLKHTERGMVQKVLL 921
            FGK QSKIGRVDSLDDDGFPF+GANLQ GDIIIG+ A+SGADHS+KLKHTERG VQKV+L
Sbjct: 867  FGKIQSKIGRVDSLDDDGFPFVGANLQIGDIIIGRCADSGADHSIKLKHTERGYVQKVVL 926

Query: 920  SANDEGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTVQGIVPDIVINP 741
            S+NDEGKNFAVVSLRQVRSP LGDKFSSMHGQKGVLGFLESQENFPFT QGIVPDIVINP
Sbjct: 927  SSNDEGKNFAVVSLRQVRSPVLGDKFSSMHGQKGVLGFLESQENFPFTKQGIVPDIVINP 986

Query: 740  HAFPSRQTPGQXXXXXXXXXXXXXXXXXXATPFSTLSVDAIMEQLHGRGFSRWGNERVYN 561
            HAFPSRQTPGQ                  ATPFST SV+AI +QLH  GFSRWGNERVYN
Sbjct: 987  HAFPSRQTPGQLLEAALGKGIACVGSLRNATPFSTSSVEAITDQLHRAGFSRWGNERVYN 1046

Query: 560  GRTGEMVNSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEME 381
            GRTGEMV SLIFMGPTFYQRL HM+EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEME
Sbjct: 1047 GRTGEMVRSLIFMGPTFYQRLHHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEME 1106

Query: 380  RDCLIAHGAAANLHERLFTLSDSSQMHICGKCKNMANVIQRSVQGG-KVRGPFCRFCESV 204
            RDCLIAHGA+ANL+ERLFTLSDSSQ+HIC KCKN+ANVI R V GG K+RGP+CRFCES 
Sbjct: 1107 RDCLIAHGASANLYERLFTLSDSSQIHICSKCKNVANVILRPVSGGRKIRGPYCRFCESA 1166

Query: 203  EDIVKVNVPYGAKLLCQELFSMGISLKFDTEIC 105
            +DIV  +VPYGAKLLCQELFSMGI+LKF+TE+C
Sbjct: 1167 DDIVVAHVPYGAKLLCQELFSMGINLKFETELC 1199


>gb|EPS73521.1| hypothetical protein M569_01229, partial [Genlisea aurea]
          Length = 1205

 Score = 1406 bits (3640), Expect = 0.0
 Identities = 702/996 (70%), Positives = 798/996 (80%), Gaps = 5/996 (0%)
 Frame = -2

Query: 3077 LCWMNGVDNPDCEFDHGGYFIVKGAEKTFIAQEQICLKRLWVYNNPTWMVGYRPGDKRKR 2898
            LCW+      DCEFD GGYFI+KGAEKTFIAQEQICLKRLWV  +PTW + YRP  KR+R
Sbjct: 213  LCWLKSTGKKDCEFDQGGYFIIKGAEKTFIAQEQICLKRLWVSKDPTWTISYRPITKRRR 272

Query: 2897 IYIKLTETLKLEHIKGGEKALSVYF-LAEMPIWILFFALGVSSDRXXXXXXXXXXXXXXX 2721
            IY+KL    K+E    GEK L+VYF   EMPIWILFFALG  +D+               
Sbjct: 273  IYLKLVP--KVESAPVGEKILTVYFSFVEMPIWILFFALGARNDKEVVKMIDMDIEDSAI 330

Query: 2720 XXXLMASIHEVDKNCEDFRKGKKALAYVDRLIKSCKFPPQESVEQCIKEYLFPNLSGFKQ 2541
               L+ASIH+ D   E FRK   A+ ++  L++  K+PP ESVE+  + +LFP+L    Q
Sbjct: 331  ANILLASIHDADSKYEGFRKNGSAIKHLKDLMQEGKYPPTESVEEYFQIHLFPHLKSSVQ 390

Query: 2540 KARFLGYMVKCLLHSFIGRRKVDNRDDFRNKXXXXXXXXXXXXXXAHIKHAERRMVKAMQ 2361
            KA FL YMVKCLL  + GRRKVDNRDD RNK                IKHAERRM+++MQ
Sbjct: 391  KACFLAYMVKCLLECYKGRRKVDNRDDLRNKRLELAGELLERELRIQIKHAERRMMRSMQ 450

Query: 2360 RDLYGDRQVQPIEHYLDASIITNGLSRAFSTGHWCHAYKRMERVSGVVATLRRTNPLQMT 2181
            RDL   R +Q I+HYLDASIITNGLSRAFSTG W H YKRMER+SG+VATLRRTNPLQ  
Sbjct: 451  RDLDKGRDLQTIDHYLDASIITNGLSRAFSTGAWSHPYKRMERISGIVATLRRTNPLQAI 510

Query: 2180 ADMRKMRQQVTYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTTIL-- 2007
            ADMRK RQQV+YTG+VGDARYPHPSHWGK+CFLSTPDGENCGLVKNLAS+GLVST +L  
Sbjct: 511  ADMRKTRQQVSYTGRVGDARYPHPSHWGKICFLSTPDGENCGLVKNLASLGLVSTEVLDQ 570

Query: 2006 KPLLETLFRCGMQKLVDDSATSLHGKQKVLLDGEWVGVCEDSALFVSKLRRKRRRNEVPH 1827
            + LL+    CGM++L DD+++ L GK K+ LDG+ VGVC DS+ FVS LRR+R++NEVPH
Sbjct: 571  EGLLKKFRECGMEQLADDTSSLLDGKHKIFLDGDLVGVCRDSSSFVSMLRRRRQKNEVPH 630

Query: 1826 QVEVKRDELQGEIRIFSDAGRILRPLLVVSNLKKIKALKGGDYGFQALLDNXXXXXXXXX 1647
            QVE+K D+  GE+R+F+DAGRILRPLLVV NL+KI  LK   + FQ+LLD          
Sbjct: 631  QVEIKMDQSNGEVRVFADAGRILRPLLVVRNLRKINDLKSHVF-FQSLLDVGIVELIGPE 689

Query: 1646 XXEDCRTAWGVEYILKADKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSE 1467
              EDC+TAWG +Y+  A+ ENPP KY+HCELD SFLLGLSCGIIPFANHDHARRVLYQSE
Sbjct: 690  EEEDCQTAWGTKYLFMAELENPPVKYSHCELDSSFLLGLSCGIIPFANHDHARRVLYQSE 749

Query: 1466 KHSQQAIGFSTVNPNNRVDTNTHQLYYPQRPLFRTMLSDSLGKPKNARHQKGMLPRPEYY 1287
            KHSQQAIGFST +PN RVDTN+HQLYYPQ+PLFRT+LSD LGK  ++  +KG++P P ++
Sbjct: 750  KHSQQAIGFSTTSPNIRVDTNSHQLYYPQKPLFRTVLSDCLGKLTDSCRRKGIIPLPPFF 809

Query: 1286 NGQCAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHVRSYKAEVDNKEAV-AKKLKVED 1110
            NGQCAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHVRSYK++VDN EA   KK K +D
Sbjct: 810  NGQCAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHVRSYKSDVDNSEAAPVKKFKADD 869

Query: 1109 SVNFGKTQSKIGRVDSLDDDGFPFIGANLQSGDIIIGKFAESGADHSVKLKHTERGMVQK 930
             ++FGK QSKIGRVDSLD+DGFP++GANLQ+GDI+IGK   +G DHS+KLKHTERGMVQK
Sbjct: 870  LISFGKVQSKIGRVDSLDEDGFPYVGANLQTGDIVIGKCTATGVDHSIKLKHTERGMVQK 929

Query: 929  VLLSANDEGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTVQGIVPDIV 750
            V+LSA+DEG+N+AVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFT QGIVPDIV
Sbjct: 930  VILSADDEGRNYAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTRQGIVPDIV 989

Query: 749  INPHAFPSRQTPGQXXXXXXXXXXXXXXXXXXATPFSTLSVDAIMEQLHGRGFSRWGNER 570
            INPHAFPSRQTPGQ                  ATPFS+ SV+ I  QLH  GFSRWG E+
Sbjct: 990  INPHAFPSRQTPGQLLEAALGKGIALGGGLKYATPFSSPSVEDITAQLHRLGFSRWGAEK 1049

Query: 569  VYNGRTGEMVNSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFG 390
            VY+GRTGE + SLIFMGPTFYQRL HMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFG
Sbjct: 1050 VYDGRTGEALKSLIFMGPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFG 1109

Query: 389  EMERDCLIAHGAAANLHERLFTLSDSSQMHICGKCKNMANVIQRSVQGG-KVRGPFCRFC 213
            EMERDCLIAHGAAANLHERLFTLSDSSQMHIC KCKNMANVIQR V GG KVRGP+CRFC
Sbjct: 1110 EMERDCLIAHGAAANLHERLFTLSDSSQMHICRKCKNMANVIQRPVFGGRKVRGPYCRFC 1169

Query: 212  ESVEDIVKVNVPYGAKLLCQELFSMGISLKFDTEIC 105
            ESVED+V+VNVPYGAKLLCQELFSMGISLKFDTEIC
Sbjct: 1170 ESVEDVVRVNVPYGAKLLCQELFSMGISLKFDTEIC 1205


>ref|XP_004288915.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Fragaria
            vesca subsp. vesca]
          Length = 1201

 Score = 1404 bits (3634), Expect = 0.0
 Identities = 695/993 (69%), Positives = 792/993 (79%), Gaps = 2/993 (0%)
 Frame = -2

Query: 3077 LCWMNGVDNPDCEFDHGGYFIVKGAEKTFIAQEQICLKRLWVYNNPTWMVGYRPGDKRKR 2898
            LCWM GV+  DCEFD GGYFI+ GAEKTFIAQEQ CLKRL + N+    V YR   KR R
Sbjct: 210  LCWMKGVEKGDCEFDQGGYFIINGAEKTFIAQEQSCLKRLLITNSQGLTVAYRSEVKRHR 269

Query: 2897 IYIKLTETLKLEHIKGGEKALSVYFLA-EMPIWILFFALGVSSDRXXXXXXXXXXXXXXX 2721
            + I+L+   KLE+++G EK LSVYF++ E+P+WI FFALGVSSD+               
Sbjct: 270  LIIRLSGISKLENVEGVEKVLSVYFMSTEIPVWIWFFALGVSSDKEVIDLIDYGIEDASI 329

Query: 2720 XXXLMASIHEVDKNCEDFRKGKKALAYVDRLIKSCKFPPQESVEQCIKEYLFPNLSGFKQ 2541
               L ASI + D+  +DFR+G  AL YV+  IKS  FPP ESVE CI  YLFPN+ G KQ
Sbjct: 330  SNILFASIRDADERKDDFRRGNNALRYVENAIKSTTFPPGESVEDCISMYLFPNMRGLKQ 389

Query: 2540 KARFLGYMVKCLLHSFIGRRKVDNRDDFRNKXXXXXXXXXXXXXXAHIKHAERRMVKAMQ 2361
            KARFLGYMVKCLL + IG RK DNRDDFRNK              AH+ HA R+M KA+Q
Sbjct: 390  KARFLGYMVKCLLQTSIGLRKCDNRDDFRNKRLELAGELLERELKAHVSHARRKMAKALQ 449

Query: 2360 RDLYGDRQVQPIEHYLDASIITNGLSRAFSTGHWCHAYKRMERVSGVVATLRRTNPLQMT 2181
            RDL GD  V+P+EHYLDASI+TNG+SRAFSTG WCH +KRMER+SGVVA + R NPLQ  
Sbjct: 450  RDLGGDHVVRPVEHYLDASIVTNGVSRAFSTGAWCHPFKRMERISGVVANIGRANPLQTM 509

Query: 2180 ADMRKMRQQVTYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTTILKP 2001
             DMRK RQQV YTGK GDARYPHPSHWGKVCFLSTPDGENCGLVKNLA+  LVS  I +P
Sbjct: 510  IDMRKTRQQVQYTGKAGDARYPHPSHWGKVCFLSTPDGENCGLVKNLATTALVSINISEP 569

Query: 2000 LLETLFRCGMQKLVDDSATSLHGKQKVLLDGEWVGVCEDSALFVSKLRRKRRRNEVPHQV 1821
            +L  LF+CG+++LVDD+ TSL GK KV L+G+WVG+C DS  FV+KLRR RR  ++PHQV
Sbjct: 570  ILPKLFKCGIEELVDDTYTSLAGKHKVFLNGDWVGICVDSHGFVTKLRRLRRSKKLPHQV 629

Query: 1820 EVKRDELQGEIRIFSDAGRILRPLLVVSNLKKIKALKGGDYGFQALLDNXXXXXXXXXXX 1641
            E+KRDE +GE+RIFSDAGRILRPLLVV  LKKIKA KG  + FQ  LD            
Sbjct: 630  EIKRDEHKGEVRIFSDAGRILRPLLVVQGLKKIKAAKGEKHTFQDFLDKGIIEFIGAEEE 689

Query: 1640 EDCRTAWGVEYILKADKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKH 1461
            EDCRTAW ++Y+   +++    KYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQS+KH
Sbjct: 690  EDCRTAWAIKYLFM-EEQGSVVKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSQKH 748

Query: 1460 SQQAIGFSTVNPNNRVDTNTHQLYYPQRPLFRTMLSDSLGKPKNARHQKGMLPRPEYYNG 1281
            SQQAIG+ST NPN RVDT +H L+YPQRPLFRTM++DSLGKP       G +P+PEY+NG
Sbjct: 749  SQQAIGYSTTNPNLRVDTLSHNLHYPQRPLFRTMIADSLGKPGYPVGHNGFMPKPEYFNG 808

Query: 1280 QCAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHVRSYKAEVDNKEAVAKKLKVEDSVN 1101
            Q AIVAVNVHLGYNQEDS+VMNRASLERGMFRSEH+RSYKAEV+NK ++ K+ K ++ VN
Sbjct: 809  QNAIVAVNVHLGYNQEDSIVMNRASLERGMFRSEHIRSYKAEVENKLSLEKRRKPDECVN 868

Query: 1100 FGKTQSKIGRVDSLDDDGFPFIGANLQSGDIIIGKFAESGADHSVKLKHTERGMVQKVLL 921
            FGK QSK GRVD+LDDDGFP +GA+LQSGDIIIG+ +ESG DHS+KLKHTERGMVQKV+L
Sbjct: 869  FGKIQSKFGRVDNLDDDGFPCVGASLQSGDIIIGRCSESGTDHSIKLKHTERGMVQKVVL 928

Query: 920  SANDEGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTVQGIVPDIVINP 741
            S+ND GKNFAVVSLRQVRSP LGDKFSSMHGQKGVLGFLE QENFPFT+QGIVPDIVINP
Sbjct: 929  SSNDAGKNFAVVSLRQVRSPSLGDKFSSMHGQKGVLGFLEYQENFPFTIQGIVPDIVINP 988

Query: 740  HAFPSRQTPGQXXXXXXXXXXXXXXXXXXATPFSTLSVDAIMEQLHGRGFSRWGNERVYN 561
            HAFPSRQTPGQ                  ATPFSTLSVD I +QLH  GFSRWGNERVYN
Sbjct: 989  HAFPSRQTPGQLLEAALGKGIACGGSKRYATPFSTLSVDDITDQLHRAGFSRWGNERVYN 1048

Query: 560  GRTGEMVNSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEME 381
            GRTGEMV  LIFMGPTFYQRLIHM+EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEME
Sbjct: 1049 GRTGEMVRQLIFMGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEME 1108

Query: 380  RDCLIAHGAAANLHERLFTLSDSSQMHICGKCKNMANVIQRSVQGG-KVRGPFCRFCESV 204
            RDCLIAHGA+ANLHERLFTLSDSS M++C KC+N ANVI+R + GG K+RGP+CR C+S 
Sbjct: 1109 RDCLIAHGASANLHERLFTLSDSSLMNVCQKCQNAANVIERKLTGGRKIRGPYCRVCDSA 1168

Query: 203  EDIVKVNVPYGAKLLCQELFSMGISLKFDTEIC 105
            +DIV+VNVPYGAKLLCQELFSMGISLKF+T +C
Sbjct: 1169 DDIVRVNVPYGAKLLCQELFSMGISLKFETRLC 1201


>gb|EOY29337.1| DNA-directed RNA polymerase isoform 2 [Theobroma cacao]
          Length = 961

 Score = 1391 bits (3600), Expect = 0.0
 Identities = 686/961 (71%), Positives = 775/961 (80%), Gaps = 6/961 (0%)
 Frame = -2

Query: 2969 LKRLWVYNNPTWMVGYRPGDKRKRIYIKLTETLKLEHIKGGEKALSVYFLA-EMPIWILF 2793
            +KRLW+ N+  W + YR   KR R+ I+L E  K+E+IKGGEK L+VYFL+ E+P+W+LF
Sbjct: 1    MKRLWISNSQGWTIAYRSEVKRNRLIIRLVENSKVEYIKGGEKVLTVYFLSTEIPVWVLF 60

Query: 2792 FALGVSSDRXXXXXXXXXXXXXXXXXXLMASIHEVDKNCEDFRKGKKALAYVDRLIKSCK 2613
            FALGVSSD+                  L ASI   D  C  F +G+ A+ YV +L+K  +
Sbjct: 61   FALGVSSDKEVVNLIDYESNDSSITNILFASIRNADGKCYKFCQGRNAIDYVGKLVKDTR 120

Query: 2612 FPPQESVEQCIKEYLFPNLSGFKQKARFLGYMVKCLLHSFIGRRKVDNRDDFRNKXXXXX 2433
            FPP+E +E+C+  YLFP L  FKQKARFLGYMVKCLL ++ GR K DNRDDFRNK     
Sbjct: 121  FPPEEGIEECLSTYLFPTLRSFKQKARFLGYMVKCLLQAYTGRLKCDNRDDFRNKRLELA 180

Query: 2432 XXXXXXXXXAHIKHAERRMVKAMQRDLYGDRQVQPIEHYLDASIITNGLSRAFSTGHWCH 2253
                      HI HA RRM K +QRDLY DR V+PIEHYLDASI+TNGLSRAFSTG W H
Sbjct: 181  GELLERELKVHIAHARRRMAKTLQRDLYADRTVRPIEHYLDASIVTNGLSRAFSTGAWSH 240

Query: 2252 AYKRMERVSGVVATLRRTNPLQMTADMRKMRQQVTYTGKVGDARYPHPSHWGKVCFLSTP 2073
             YKRMER+SGVVA L R NPLQ   D+RK RQQV YTGKVGDARYPHPSHWGKVCFLSTP
Sbjct: 241  PYKRMERISGVVANLGRANPLQTMVDLRKTRQQVQYTGKVGDARYPHPSHWGKVCFLSTP 300

Query: 2072 DGENCGLVKNLASMGLVSTTILKPLLETLFRCGMQKLVDDSATSLHGKQKVLLDGEWVGV 1893
            DGENCGLVKNLA+ GLVST I++ +++ LF  GM++LV+D+ +SL GK KV L+GEWVGV
Sbjct: 301  DGENCGLVKNLATTGLVSTNIMESIVDKLFDSGMEELVNDTCSSLDGKDKVFLNGEWVGV 360

Query: 1892 CEDSALFVSKLRRKRRRNEVPHQVEVKRDELQGEIRIFSDAGRILRPLLVVSNLKKIKAL 1713
            CEDS  F +++RRKRR  E PHQVE+KRDE +GE+RIFSD GRILRPLLVV NL +IKA 
Sbjct: 361  CEDSLSFAAEVRRKRRSKEFPHQVEIKRDEHKGEVRIFSDGGRILRPLLVVDNLNRIKAF 420

Query: 1712 KGGDYGFQALLDNXXXXXXXXXXXEDCRTAWGVEYILKADKENPPAKYTHCELDMSFLLG 1533
            KG +Y FQALL+            EDCRTAW ++Y+L   +   P KYTHCELDMSFLLG
Sbjct: 421  KGENYTFQALLEGGIIELVGTEEEEDCRTAWSIKYLLTDVEGKQPVKYTHCELDMSFLLG 480

Query: 1532 LSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTVNPNNRVDTNTHQLYYPQRPLFRTMLS 1353
            LSCGIIPFANHDHARRVLYQ++KHSQQAIGFST NPN RVDT +HQLYYPQRPLFRTM S
Sbjct: 481  LSCGIIPFANHDHARRVLYQAQKHSQQAIGFSTTNPNIRVDTLSHQLYYPQRPLFRTMTS 540

Query: 1352 DSLGKPKNARHQKGMLPRPEYYNGQCAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHV 1173
            D LGK  +   QKG+LP+PE YNGQ AIVAVNVHLGYNQEDSLVMNR+SLERGMFRSEHV
Sbjct: 541  DCLGKLGHPLGQKGVLPKPELYNGQNAIVAVNVHLGYNQEDSLVMNRSSLERGMFRSEHV 600

Query: 1172 RSYKAEVDNKEAVAKKLKVEDSVNFGKTQSKIGRVDSLDDDGFPFIGANLQSGDIIIGKF 993
            RSYKAEVDNKE   K+ K ED VNFGK QSKIGRVDSLDDDGFP++GANLQ GDI+IG+ 
Sbjct: 601  RSYKAEVDNKEIQDKRRKSEDIVNFGKIQSKIGRVDSLDDDGFPYVGANLQCGDIVIGRC 660

Query: 992  AESGADHSVKLKHTERGMVQKVLLSANDEGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVL 813
            AESGADHS+KLKHTERGMVQKV+LS+ND+GKN+AVVSLRQVRSPCLGDKFSSMHGQKGVL
Sbjct: 661  AESGADHSIKLKHTERGMVQKVVLSSNDDGKNYAVVSLRQVRSPCLGDKFSSMHGQKGVL 720

Query: 812  GFLESQENFPFTVQGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXXXXXXXXXATPFSTL 633
            GFLESQENFPFT QGIVPDIVINPHAFPSRQTPGQ                  ATPFST+
Sbjct: 721  GFLESQENFPFTTQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGSMKYATPFSTI 780

Query: 632  SVDAIMEQLHG----RGFSRWGNERVYNGRTGEMVNSLIFMGPTFYQRLIHMAEDKVKFR 465
            SVDAI EQLH      GFSRWGNERVYNGRTGEMV SLIFMGPTFYQRLIHMAEDKVKFR
Sbjct: 781  SVDAITEQLHSICHRAGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLIHMAEDKVKFR 840

Query: 464  NTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICGKC 285
            NTGPVHPLTRQPVADRKR+GGIKFGEMERDCLIAHGA+ANLHERL TLSDSSQMH+C  C
Sbjct: 841  NTGPVHPLTRQPVADRKRYGGIKFGEMERDCLIAHGASANLHERLVTLSDSSQMHVCRNC 900

Query: 284  KNMANVIQRSVQGG-KVRGPFCRFCESVEDIVKVNVPYGAKLLCQELFSMGISLKFDTEI 108
            KN+ANVI+R+V GG K+RGP+CR C+SV+DIV+VNVPYGAKLLCQELFSMGI+LKF+T++
Sbjct: 901  KNVANVIERAVPGGRKIRGPYCRGCQSVDDIVRVNVPYGAKLLCQELFSMGINLKFETQL 960

Query: 107  C 105
            C
Sbjct: 961  C 961


>ref|XP_003527775.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Glycine max]
          Length = 1205

 Score = 1390 bits (3599), Expect = 0.0
 Identities = 694/999 (69%), Positives = 795/999 (79%), Gaps = 8/999 (0%)
 Frame = -2

Query: 3077 LCWMNGVDNPDCEFDHGGYFIVKGAEKTFIAQEQICLKRLWVYNNPTWMVGYRPGDKRKR 2898
            LCWM   +  D EFDHGGYFIVKGAEKTFIAQEQ+ LKRLWV N+P WM+ Y+   KR R
Sbjct: 208  LCWMKEAEKEDDEFDHGGYFIVKGAEKTFIAQEQLYLKRLWVMNSPGWMIAYKSQMKRNR 267

Query: 2897 IYIKLTETLKLEHIKGGEKALSVYFLA-EMPIWILFFALGVSSDRXXXXXXXXXXXXXXX 2721
            + IKL    + E ++ G+ +L+VYFL+ E+P+W+LFFALGVSSD+               
Sbjct: 268  MVIKLVGNSRGEEVENGDMSLAVYFLSVEVPVWVLFFALGVSSDKEIVDLIGCGNDDVRI 327

Query: 2720 XXXLMASIHEVDKNCEDFRKGKKALAYVDRLIKSCKFPPQESVEQCIKEYLFPNLSGFKQ 2541
               L AS+ + D+ C  FR+G+ A+ Y+++ +KS +FPP ES+++C++ Y+FP +SG  +
Sbjct: 328  QNILFASVRDADEKCGAFRRGRHAVQYLEKCVKSVQFPPSESMQECLEMYVFPGISGLNR 387

Query: 2540 KARFLGYMVKCLLHSFIGRRKVDNRDDFRNKXXXXXXXXXXXXXXAHIKHAERRMVKAMQ 2361
            KARFL YMVK LL ++ GRRK DNRDDFRNK               HI HA +RM KA+Q
Sbjct: 388  KARFLAYMVKGLLLAYTGRRKCDNRDDFRNKRLELASELLDRELKVHIAHARKRMAKALQ 447

Query: 2360 RDLYGDRQVQPIEHYLDASIITNGLSRAFSTGHWCHAYKRMERVSGVVATLRRTNPLQMT 2181
            RDLYGDR V+PIEHYLDASIITNGL RAFSTG W H YKRMER+SGVVA + RTNPLQ  
Sbjct: 448  RDLYGDRDVRPIEHYLDASIITNGLQRAFSTGAWSHPYKRMERISGVVANVGRTNPLQTM 507

Query: 2180 ADMRKMRQQVTYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLVST---TI 2010
            A++R+ RQQV YTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLA  GLVST    +
Sbjct: 508  AELRRARQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLAVTGLVSTDVSAV 567

Query: 2009 LKPLLETLFRCGMQKLVDDSATSLHGKQKVLLDGEWVGVCEDSALFVSKLRRKRRRNEVP 1830
             + +L  L  CGM++LVDD++T L  K KVLL+G+WVGVC DS+ FV++LR +RRRNE+P
Sbjct: 568  SEYILPKLLDCGMEELVDDTSTHLGNKDKVLLNGDWVGVCPDSSSFVAELRSRRRRNELP 627

Query: 1829 HQVEVKRDELQGEIRIFSDAGRILRPLLVVSNLKKIKALKGGDYGFQALLDNXXXXXXXX 1650
            HQVE+KRD+ Q E+RI+SDAGRILRPLLVV NL KIK  K     FQ+LLD         
Sbjct: 628  HQVEIKRDQSQHEVRIYSDAGRILRPLLVVGNLLKIKGFKSDCNSFQSLLDKGVIELIGP 687

Query: 1649 XXXEDCRTAWGVEYILKADKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQS 1470
               EDC TAWGVEY+   + +    KYTHCELDMSFLLGLSC ++PFANHDHARRVLYQS
Sbjct: 688  EEEEDCCTAWGVEYLFGKEGKRS-VKYTHCELDMSFLLGLSCSLVPFANHDHARRVLYQS 746

Query: 1469 EKHSQQAIGFSTVNPNNRVDTNTHQLYYPQRPLFRTMLSDSLGKPKNARHQKGML---PR 1299
            +KHS QAIGFST NPN RVDT +HQL+YPQ+PLFRTM SD LGKP N+  Q  +    P+
Sbjct: 747  QKHSSQAIGFSTTNPNIRVDTLSHQLHYPQKPLFRTMASDCLGKPDNSLGQNKISKIPPK 806

Query: 1298 PEYYNGQCAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHVRSYKAEVDNKEAVAKKLK 1119
             E+YNGQ AIVAVNVHLGYNQEDSLVMNRASL+RGMFRSEH+RSYK+E+DNKE+  KK K
Sbjct: 807  AEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLQRGMFRSEHIRSYKSEIDNKESSDKKRK 866

Query: 1118 VEDSVNFGKTQSKIGRVDSLDDDGFPFIGANLQSGDIIIGKFAESGADHSVKLKHTERGM 939
             ED VNF K QSKIGRVDSLDDDGFP++GANLQSGDIIIGK AESGAD+SVKLKHTERG 
Sbjct: 867  PEDIVNFAKLQSKIGRVDSLDDDGFPYVGANLQSGDIIIGKGAESGADNSVKLKHTERGY 926

Query: 938  VQKVLLSANDEGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTVQGIVP 759
            VQKV+LS+NDEGKNFAVVSLRQVRSP LGDKFSSMHGQKGVLGFLESQENFPFT QGIVP
Sbjct: 927  VQKVVLSSNDEGKNFAVVSLRQVRSPVLGDKFSSMHGQKGVLGFLESQENFPFTRQGIVP 986

Query: 758  DIVINPHAFPSRQTPGQXXXXXXXXXXXXXXXXXXATPFSTLSVDAIMEQLHGRGFSRWG 579
            DIVINPHAFPSRQTPGQ                  ATPFST SVDAI EQLH  GFSRWG
Sbjct: 987  DIVINPHAFPSRQTPGQLLEAALGKGIACGGILRQATPFSTPSVDAITEQLHRAGFSRWG 1046

Query: 578  NERVYNGRTGEMVNSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGI 399
            NERVYNGRTGEMV SLIFMGPTFYQRL HM+EDKVKFRNTGPVHPLTRQPVADRKRFGGI
Sbjct: 1047 NERVYNGRTGEMVRSLIFMGPTFYQRLHHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGI 1106

Query: 398  KFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICGKCKNMANVIQRSVQGG-KVRGPFC 222
            KFGEMERDCLIAHGA+ANL+ERLFTLSDSSQ+HIC KCKN+ANVI R V GG K+RGP+C
Sbjct: 1107 KFGEMERDCLIAHGASANLYERLFTLSDSSQIHICSKCKNVANVILRPVSGGRKIRGPYC 1166

Query: 221  RFCESVEDIVKVNVPYGAKLLCQELFSMGISLKFDTEIC 105
            R CES +DIV  +VPYGAKLLCQELFSMGI+LKF+T++C
Sbjct: 1167 RHCESADDIVVAHVPYGAKLLCQELFSMGINLKFETQLC 1205


>ref|XP_003523670.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Glycine max]
          Length = 1205

 Score = 1389 bits (3595), Expect = 0.0
 Identities = 689/996 (69%), Positives = 792/996 (79%), Gaps = 5/996 (0%)
 Frame = -2

Query: 3077 LCWMNGVDNPDCEFDHGGYFIVKGAEKTFIAQEQICLKRLWVYNNPTWMVGYRPGDKRKR 2898
            LCWM   +  D EFDHGGYFIVKGAEKTFIAQEQ+ LKRLWV N+P WM+ Y+   KR R
Sbjct: 211  LCWMKDAEKDDDEFDHGGYFIVKGAEKTFIAQEQLYLKRLWVMNSPGWMIAYKSQMKRNR 270

Query: 2897 IYIKLTETLKLEHIKGGEKALSVYFLA-EMPIWILFFALGVSSDRXXXXXXXXXXXXXXX 2721
            + IKL    + E ++ G+  L+VYFL+ E+P+W+LFFALGVSSD+               
Sbjct: 271  MVIKLVGNSRSEEVENGDMCLTVYFLSVEVPVWVLFFALGVSSDKEIVDLIGCGNDDVRI 330

Query: 2720 XXXLMASIHEVDKNCEDFRKGKKALAYVDRLIKSCKFPPQESVEQCIKEYLFPNLSGFKQ 2541
               L AS+ + D+ C  FR+ + A+ Y+++ +KS +FPP ES+++C++ Y+FP +SG  +
Sbjct: 331  QNILFASVRDADEKCGAFRRVRNAVQYLEKCVKSVQFPPSESMQECLEMYVFPGISGLNR 390

Query: 2540 KARFLGYMVKCLLHSFIGRRKVDNRDDFRNKXXXXXXXXXXXXXXAHIKHAERRMVKAMQ 2361
            KARFL YMVK LL ++ GRRK DNRDDFRNK               H+ HA +RM KA+Q
Sbjct: 391  KARFLAYMVKGLLLAYTGRRKCDNRDDFRNKRLELASELLDRELKVHVAHARKRMAKALQ 450

Query: 2360 RDLYGDRQVQPIEHYLDASIITNGLSRAFSTGHWCHAYKRMERVSGVVATLRRTNPLQMT 2181
            RDLYGDR V+PIEHYLDASIITNGL RAFSTG W H YKRMER+SGVVA + RTNPLQ  
Sbjct: 451  RDLYGDRDVRPIEHYLDASIITNGLQRAFSTGAWSHPYKRMERISGVVANVGRTNPLQTM 510

Query: 2180 ADMRKMRQQVTYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTTIL-- 2007
            A++R+ RQQV YTGKVGDARYPHPSHWGKVCFL+TPDGENCGLVKNL+  GLVST +   
Sbjct: 511  AELRRARQQVQYTGKVGDARYPHPSHWGKVCFLTTPDGENCGLVKNLSVTGLVSTDVTDV 570

Query: 2006 -KPLLETLFRCGMQKLVDDSATSLHGKQKVLLDGEWVGVCEDSALFVSKLRRKRRRNEVP 1830
             + +L  L  CGMQ+LVDD++T L    KVLL+G+WVGVC DS+ FV++LR +RRRNE+P
Sbjct: 571  TESILLKLVDCGMQELVDDTSTHLGSMDKVLLNGDWVGVCPDSSSFVAELRSRRRRNELP 630

Query: 1829 HQVEVKRDELQGEIRIFSDAGRILRPLLVVSNLKKIKALKGGDYGFQALLDNXXXXXXXX 1650
            HQVE+KRD+ Q E+RI+SDAGRILRPLLVV NL KIK  K   Y FQ+LLD         
Sbjct: 631  HQVEIKRDQSQHEVRIYSDAGRILRPLLVVGNLLKIKGFKSDRYSFQSLLDKGVIELIGP 690

Query: 1649 XXXEDCRTAWGVEYILKADKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQS 1470
               EDC TAWGVEY+   + +    KYTHCELDMSFLLGLSC ++PFANHDHARRVLYQS
Sbjct: 691  EEEEDCCTAWGVEYLFGKEGKRS-VKYTHCELDMSFLLGLSCSLVPFANHDHARRVLYQS 749

Query: 1469 EKHSQQAIGFSTVNPNNRVDTNTHQLYYPQRPLFRTMLSDSLGKPKNARHQKGMLPRPEY 1290
            +KHS QAIGFST NPN RVDT +HQL+YPQ+PLFRTM SD LGKP ++  Q  + P+ E+
Sbjct: 750  QKHSSQAIGFSTTNPNIRVDTLSHQLHYPQKPLFRTMTSDCLGKPDHSLGQSKIPPKAEF 809

Query: 1289 YNGQCAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHVRSYKAEVDNKEAVAKKLKVED 1110
            YNGQ AIVAVNVHLGYNQEDSLVMNRASL+RGMFRSEH+RSYK+E+DNKE+  KK K ED
Sbjct: 810  YNGQNAIVAVNVHLGYNQEDSLVMNRASLQRGMFRSEHIRSYKSEIDNKESSDKKRKPED 869

Query: 1109 SVNFGKTQSKIGRVDSLDDDGFPFIGANLQSGDIIIGKFAESGADHSVKLKHTERGMVQK 930
             VNF K QSKIGRVDSLDDDGFP++GANLQSGDIIIGK AESGAD+SVKLKHTERG VQK
Sbjct: 870  IVNFAKLQSKIGRVDSLDDDGFPYVGANLQSGDIIIGKCAESGADNSVKLKHTERGYVQK 929

Query: 929  VLLSANDEGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTVQGIVPDIV 750
            V+LS+NDEGKNFAVVSLRQVRSP LGDKFSSMHGQKGVLGFLESQENFPFT QGIVPDIV
Sbjct: 930  VVLSSNDEGKNFAVVSLRQVRSPVLGDKFSSMHGQKGVLGFLESQENFPFTRQGIVPDIV 989

Query: 749  INPHAFPSRQTPGQXXXXXXXXXXXXXXXXXXATPFSTLSVDAIMEQLHGRGFSRWGNER 570
            INPHAFPSRQTPGQ                  ATPFST SVDAI EQLH  GFSRWGNER
Sbjct: 990  INPHAFPSRQTPGQLLEAALGKGIACGGILKQATPFSTPSVDAITEQLHRAGFSRWGNER 1049

Query: 569  VYNGRTGEMVNSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFG 390
            VYNGRTGEMV SLIFMGPTFYQRL HM+EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFG
Sbjct: 1050 VYNGRTGEMVRSLIFMGPTFYQRLHHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFG 1109

Query: 389  EMERDCLIAHGAAANLHERLFTLSDSSQMHICGKCKNMANVIQRSVQGG-KVRGPFCRFC 213
            EMERDCLIAHGA+ANL+ERLFTLSDSSQ+HIC KCK +ANVI R V GG K+RGP+CR C
Sbjct: 1110 EMERDCLIAHGASANLYERLFTLSDSSQIHICSKCKKVANVILRPVSGGRKIRGPYCRHC 1169

Query: 212  ESVEDIVKVNVPYGAKLLCQELFSMGISLKFDTEIC 105
            ES +DIV  +VPYGAKLLCQELFSMGI+LKF+T++C
Sbjct: 1170 ESADDIVVAHVPYGAKLLCQELFSMGINLKFETQLC 1205