BLASTX nr result
ID: Atropa21_contig00012157
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00012157
(587 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004229698.1| PREDICTED: RING-H2 finger protein ATL73-like... 200 3e-49
ref|XP_006354621.1| PREDICTED: RING-H2 finger protein ATL73-like... 178 8e-43
ref|XP_004229697.1| PREDICTED: RING-H2 finger protein ATL34-like... 148 9e-34
ref|XP_004510577.1| PREDICTED: RING-H2 finger protein ATL3-like ... 85 1e-14
ref|XP_003529860.1| PREDICTED: RING-H2 finger protein ATL3-like ... 83 6e-14
ref|XP_003565491.1| PREDICTED: RING-H2 finger protein ATL32-like... 82 1e-13
dbj|BAD54611.1| RING finger-like [Oryza sativa Japonica Group] 81 2e-13
ref|NP_001174833.1| Os06g0534900 [Oryza sativa Japonica Group] g... 81 2e-13
gb|EEC80757.1| hypothetical protein OsI_23248 [Oryza sativa Indi... 81 2e-13
gb|EAZ37235.1| hypothetical protein OsJ_21573 [Oryza sativa Japo... 81 2e-13
ref|XP_004303767.1| PREDICTED: RING-H2 finger protein ATL3-like ... 80 3e-13
ref|XP_002304259.2| hypothetical protein POPTR_0003s07090g [Popu... 80 4e-13
ref|XP_003548383.1| PREDICTED: RING-H2 finger protein ATL3-like ... 80 4e-13
ref|XP_003565490.1| PREDICTED: RING-H2 finger protein ATL5-like ... 79 7e-13
gb|EXB64653.1| RING-H2 finger protein ATL3 [Morus notabilis] 79 9e-13
ref|XP_006342886.1| PREDICTED: RING-H2 finger protein ATL60-like... 79 9e-13
ref|XP_002438223.1| hypothetical protein SORBIDRAFT_10g009860 [S... 79 9e-13
gb|ACG25761.1| RING-H2 finger protein ATL5A [Zea mays] gi|413945... 79 9e-13
gb|AEJ08748.1| RSI6 [Solanum tuberosum] 79 1e-12
ref|XP_003565492.1| PREDICTED: RING-H2 finger protein ATL1-like ... 79 1e-12
>ref|XP_004229698.1| PREDICTED: RING-H2 finger protein ATL73-like [Solanum lycopersicum]
Length = 131
Score = 200 bits (508), Expect = 3e-49
Identities = 97/138 (70%), Positives = 107/138 (77%)
Frame = -3
Query: 558 MDFPFELFSTATTTVFLTIGIKFRWFRHPDNHIPPPFTADDNDEGSYCAVCLNDVIGGDK 379
MDF FE+ ATTT L GIKFRWF PDNH+PPPFT DE YCAVCL DVI G+
Sbjct: 1 MDFQFEVLLAATTTDLLICGIKFRWFCRPDNHLPPPFT----DEARYCAVCLYDVISGEN 56
Query: 378 CRELPKCGHVFHVECVDAWLECNGTCPLCRRQVTDQLPRCKGENVISRAEDFIVEKIYNC 199
CR+LPKCGHVFHVECVDAWL+ N TCPLCRRQVTDQ +GE VISRAEDFI+EKIYN
Sbjct: 57 CRKLPKCGHVFHVECVDAWLQSNRTCPLCRRQVTDQ---GRGETVISRAEDFILEKIYNP 113
Query: 198 ITEKVTMVLFGGMFLVHP 145
ITE VT+++ GGM L HP
Sbjct: 114 ITEIVTVLVSGGMSLAHP 131
>ref|XP_006354621.1| PREDICTED: RING-H2 finger protein ATL73-like [Solanum tuberosum]
Length = 131
Score = 178 bits (452), Expect = 8e-43
Identities = 87/138 (63%), Positives = 99/138 (71%)
Frame = -3
Query: 558 MDFPFELFSTATTTVFLTIGIKFRWFRHPDNHIPPPFTADDNDEGSYCAVCLNDVIGGDK 379
MD FE+ ATT L GIKFRWF DN+ PPPFT D+G YCAVCL DVI G+
Sbjct: 1 MDCKFEVLLAATTPDLLICGIKFRWFCRSDNYQPPPFT----DKGRYCAVCLYDVISGEN 56
Query: 378 CRELPKCGHVFHVECVDAWLECNGTCPLCRRQVTDQLPRCKGENVISRAEDFIVEKIYNC 199
CR+LPKCGHVFH ECVD WL+ N TCPLCRR+VTDQ +GE VISRAEDFI+E IYN
Sbjct: 57 CRKLPKCGHVFHAECVDTWLQRNRTCPLCRREVTDQR---RGETVISRAEDFILESIYNP 113
Query: 198 ITEKVTMVLFGGMFLVHP 145
ITE VT+++ GG HP
Sbjct: 114 ITEMVTILVCGGTSFAHP 131
>ref|XP_004229697.1| PREDICTED: RING-H2 finger protein ATL34-like [Solanum lycopersicum]
Length = 144
Score = 148 bits (374), Expect = 9e-34
Identities = 79/146 (54%), Positives = 97/146 (66%), Gaps = 9/146 (6%)
Frame = -3
Query: 558 MDFPFELFSTATTT---VFLTIGIKFRWFRHPDNHIPPPFTADDNDEG-SYCAVCLNDVI 391
M F FE +T T T +FL IKFRWF PDN++PPPF + G YCAVCL++V
Sbjct: 1 MYFHFEPLATFTGTAIAIFLISTIKFRWFS-PDNYLPPPFNVVVEEIGYCYCAVCLDEVN 59
Query: 390 GGDKCRELPKCGHVFHVECVDAWLECNGTCPLCRRQVTDQLPRCKGEN-----VISRAED 226
GGDKCR+LPKCGH FH CVDAWLE N TCP+CRRQVTD+LP+ +G+N V+SR E+
Sbjct: 60 GGDKCRQLPKCGHAFHAMCVDAWLEWNWTCPICRRQVTDELPKRQGQNTLFSFVLSRCEE 119
Query: 225 FIVEKIYNCITEKVTMVLFGGMFLVH 148
FI + N E+ +VLF L H
Sbjct: 120 FIAK--INTRAEEFMLVLFDSGVLGH 143
>ref|XP_004510577.1| PREDICTED: RING-H2 finger protein ATL3-like [Cicer arietinum]
Length = 331
Score = 85.1 bits (209), Expect = 1e-14
Identities = 36/75 (48%), Positives = 47/75 (62%)
Frame = -3
Query: 450 FTADDNDEGSYCAVCLNDVIGGDKCRELPKCGHVFHVECVDAWLECNGTCPLCRRQVTDQ 271
F ++D +G CAVCL D++ G+K R LPKC H FHV+C+D W + + TCPLCR V+
Sbjct: 104 FQSEDFKDGLECAVCLCDIVEGEKTRLLPKCNHGFHVDCIDMWFQSHSTCPLCRNPVSIS 163
Query: 270 LPRCKGENVISRAED 226
K N IS ED
Sbjct: 164 CESSKPNNTISNGED 178
>ref|XP_003529860.1| PREDICTED: RING-H2 finger protein ATL3-like [Glycine max]
Length = 314
Score = 82.8 bits (203), Expect = 6e-14
Identities = 33/74 (44%), Positives = 47/74 (63%)
Frame = -3
Query: 450 FTADDNDEGSYCAVCLNDVIGGDKCRELPKCGHVFHVECVDAWLECNGTCPLCRRQVTDQ 271
F +D EG CAVCL++++ G+K R LPKC H FHV+C+D W + TCPLCR V +
Sbjct: 98 FQPEDFKEGLECAVCLSEIVQGEKLRLLPKCNHGFHVDCIDMWFHSHSTCPLCRNPVAFE 157
Query: 270 LPRCKGENVISRAE 229
+C+ NV ++
Sbjct: 158 SSKCEESNVSGNSD 171
>ref|XP_003565491.1| PREDICTED: RING-H2 finger protein ATL32-like [Brachypodium
distachyon]
Length = 204
Score = 81.6 bits (200), Expect = 1e-13
Identities = 35/58 (60%), Positives = 40/58 (68%)
Frame = -3
Query: 423 SYCAVCLNDVIGGDKCRELPKCGHVFHVECVDAWLECNGTCPLCRRQVTDQLPRCKGE 250
S CAVCL+++ GDK RELP CGHVFH+ECVDAWL TCPLCR + P GE
Sbjct: 121 SDCAVCLSELADGDKVRELPNCGHVFHLECVDAWLRSRTTCPLCRAEAESPGPMGNGE 178
>dbj|BAD54611.1| RING finger-like [Oryza sativa Japonica Group]
Length = 423
Score = 80.9 bits (198), Expect = 2e-13
Identities = 33/69 (47%), Positives = 44/69 (63%), Gaps = 6/69 (8%)
Frame = -3
Query: 459 PPPFTADDNDEG------SYCAVCLNDVIGGDKCRELPKCGHVFHVECVDAWLECNGTCP 298
PP +D EG + CAVCL DV+ G+ R LP CGH+FHV+C+D WL + TCP
Sbjct: 128 PPAADVEDGGEGKPRGGGALCAVCLEDVVAGETVRRLPSCGHLFHVDCIDMWLHAHRTCP 187
Query: 297 LCRRQVTDQ 271
LCRR ++ +
Sbjct: 188 LCRRDLSPE 196
Score = 72.8 bits (177), Expect = 6e-11
Identities = 29/47 (61%), Positives = 33/47 (70%)
Frame = -3
Query: 426 GSYCAVCLNDVIGGDKCRELPKCGHVFHVECVDAWLECNGTCPLCRR 286
G CAVCL D+ GG+ R LP CGH+FH +CVD WL TCPLCRR
Sbjct: 355 GVLCAVCLEDLRGGEMVRRLPACGHLFHEDCVDVWLRVRRTCPLCRR 401
>ref|NP_001174833.1| Os06g0534900 [Oryza sativa Japonica Group]
gi|255677117|dbj|BAH93561.1| Os06g0534900 [Oryza sativa
Japonica Group]
Length = 412
Score = 80.9 bits (198), Expect = 2e-13
Identities = 33/69 (47%), Positives = 44/69 (63%), Gaps = 6/69 (8%)
Frame = -3
Query: 459 PPPFTADDNDEG------SYCAVCLNDVIGGDKCRELPKCGHVFHVECVDAWLECNGTCP 298
PP +D EG + CAVCL DV+ G+ R LP CGH+FHV+C+D WL + TCP
Sbjct: 128 PPAADVEDGGEGKPRGGGALCAVCLEDVVAGETVRRLPSCGHLFHVDCIDMWLHAHRTCP 187
Query: 297 LCRRQVTDQ 271
LCRR ++ +
Sbjct: 188 LCRRDLSPE 196
Score = 72.8 bits (177), Expect = 6e-11
Identities = 29/47 (61%), Positives = 33/47 (70%)
Frame = -3
Query: 426 GSYCAVCLNDVIGGDKCRELPKCGHVFHVECVDAWLECNGTCPLCRR 286
G CAVCL D+ GG+ R LP CGH+FH +CVD WL TCPLCRR
Sbjct: 344 GVLCAVCLEDLRGGEMVRRLPACGHLFHEDCVDVWLRVRRTCPLCRR 390
>gb|EEC80757.1| hypothetical protein OsI_23248 [Oryza sativa Indica Group]
Length = 210
Score = 80.9 bits (198), Expect = 2e-13
Identities = 33/69 (47%), Positives = 44/69 (63%), Gaps = 6/69 (8%)
Frame = -3
Query: 459 PPPFTADDNDEG------SYCAVCLNDVIGGDKCRELPKCGHVFHVECVDAWLECNGTCP 298
PP +D EG + CAVCL DV+ G+ R LP CGH+FHV+C+D WL + TCP
Sbjct: 117 PPTADVEDGGEGKPRGGGALCAVCLEDVVAGETVRRLPSCGHLFHVDCIDMWLHAHRTCP 176
Query: 297 LCRRQVTDQ 271
LCRR ++ +
Sbjct: 177 LCRRDLSPE 185
>gb|EAZ37235.1| hypothetical protein OsJ_21573 [Oryza sativa Japonica Group]
Length = 218
Score = 80.9 bits (198), Expect = 2e-13
Identities = 33/69 (47%), Positives = 44/69 (63%), Gaps = 6/69 (8%)
Frame = -3
Query: 459 PPPFTADDNDEG------SYCAVCLNDVIGGDKCRELPKCGHVFHVECVDAWLECNGTCP 298
PP +D EG + CAVCL DV+ G+ R LP CGH+FHV+C+D WL + TCP
Sbjct: 128 PPAADVEDGGEGKPRGGGALCAVCLEDVVAGETVRRLPSCGHLFHVDCIDMWLHAHRTCP 187
Query: 297 LCRRQVTDQ 271
LCRR ++ +
Sbjct: 188 LCRRDLSPE 196
>ref|XP_004303767.1| PREDICTED: RING-H2 finger protein ATL3-like [Fragaria vesca subsp.
vesca]
Length = 303
Score = 80.5 bits (197), Expect = 3e-13
Identities = 32/60 (53%), Positives = 42/60 (70%)
Frame = -3
Query: 450 FTADDNDEGSYCAVCLNDVIGGDKCRELPKCGHVFHVECVDAWLECNGTCPLCRRQVTDQ 271
F+ +D EG CAVCL+D++ G+K R LPKC H FHVEC+D W + + TCPLCR V +
Sbjct: 97 FSPEDFKEGLECAVCLSDLVQGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRNAVVPE 156
>ref|XP_002304259.2| hypothetical protein POPTR_0003s07090g [Populus trichocarpa]
gi|550342602|gb|EEE79238.2| hypothetical protein
POPTR_0003s07090g [Populus trichocarpa]
Length = 277
Score = 80.1 bits (196), Expect = 4e-13
Identities = 34/74 (45%), Positives = 45/74 (60%)
Frame = -3
Query: 450 FTADDNDEGSYCAVCLNDVIGGDKCRELPKCGHVFHVECVDAWLECNGTCPLCRRQVTDQ 271
F + D +G CAVCL+DV+ G+K R LPKC H FH +C+D W + + TCPLCR V Q
Sbjct: 88 FQSKDFPDGLECAVCLSDVVEGEKARLLPKCNHGFHHDCIDMWFQSHSTCPLCRSSVAPQ 147
Query: 270 LPRCKGENVISRAE 229
G N ++ E
Sbjct: 148 AQGSSGNNNLNDLE 161
>ref|XP_003548383.1| PREDICTED: RING-H2 finger protein ATL3-like [Glycine max]
Length = 319
Score = 80.1 bits (196), Expect = 4e-13
Identities = 34/76 (44%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Frame = -3
Query: 450 FTADDNDEGSYCAVCLNDVIGGDKCRELPKCGHVFHVECVDAWLECNGTCPLCRRQVTDQ 271
F ++ EG CAVCL++++ G+K R LPKC H FHV+C+D W + TCPLCR VT +
Sbjct: 97 FQPEEFKEGLECAVCLSEIVEGEKLRLLPKCNHGFHVDCIDMWFHSHSTCPLCRNPVTFE 156
Query: 270 LPRC-KGENVISRAED 226
+ + NV+ +ED
Sbjct: 157 SSKIEENNNVLGSSED 172
>ref|XP_003565490.1| PREDICTED: RING-H2 finger protein ATL5-like [Brachypodium
distachyon]
Length = 210
Score = 79.3 bits (194), Expect = 7e-13
Identities = 36/59 (61%), Positives = 40/59 (67%), Gaps = 4/59 (6%)
Frame = -3
Query: 453 PFTADDNDEGSY----CAVCLNDVIGGDKCRELPKCGHVFHVECVDAWLECNGTCPLCR 289
P TA G+ CAVCL+++ GDK RELP CGHVFHVECVDAWL TCPLCR
Sbjct: 99 PVTAYQKSTGAAGDAECAVCLSELADGDKVRELPNCGHVFHVECVDAWLRSRTTCPLCR 157
>gb|EXB64653.1| RING-H2 finger protein ATL3 [Morus notabilis]
Length = 299
Score = 79.0 bits (193), Expect = 9e-13
Identities = 30/58 (51%), Positives = 42/58 (72%)
Frame = -3
Query: 450 FTADDNDEGSYCAVCLNDVIGGDKCRELPKCGHVFHVECVDAWLECNGTCPLCRRQVT 277
+ A+D EG CAVCL++++ G+K R LPKC H FHV+C+D W + + TCPLCR V+
Sbjct: 101 YRAEDFKEGLECAVCLSELVNGEKARLLPKCNHGFHVDCIDMWFQSHATCPLCRNSVS 158
>ref|XP_006342886.1| PREDICTED: RING-H2 finger protein ATL60-like [Solanum tuberosum]
Length = 261
Score = 79.0 bits (193), Expect = 9e-13
Identities = 38/90 (42%), Positives = 49/90 (54%)
Frame = -3
Query: 453 PFTADDNDEGSYCAVCLNDVIGGDKCRELPKCGHVFHVECVDAWLECNGTCPLCRRQVTD 274
PF D +G C+VCL DV G+K R LPKC H FHV+C+D W + + TCPLCR V++
Sbjct: 90 PFNTKDFKDGLECSVCLTDVSDGEKARLLPKCNHGFHVDCIDMWFQSHSTCPLCRNPVSE 149
Query: 273 QLPRCKGENVISRAEDFIVEKIYNCITEKV 184
+S + IVE I E V
Sbjct: 150 ----------MSSTKSTIVESNSGAIREPV 169
>ref|XP_002438223.1| hypothetical protein SORBIDRAFT_10g009860 [Sorghum bicolor]
gi|241916446|gb|EER89590.1| hypothetical protein
SORBIDRAFT_10g009860 [Sorghum bicolor]
Length = 168
Score = 79.0 bits (193), Expect = 9e-13
Identities = 36/79 (45%), Positives = 47/79 (59%)
Frame = -3
Query: 450 FTADDNDEGSYCAVCLNDVIGGDKCRELPKCGHVFHVECVDAWLECNGTCPLCRRQVTDQ 271
F A D + CAVCL GD+CR+LP+C H FH ECVD+WL + CP+CR V D+
Sbjct: 75 FKAADGEAAGDCAVCLEAFQAGDRCRQLPRCEHCFHAECVDSWLRKSSKCPVCRADVVDR 134
Query: 270 LPRCKGENVISRAEDFIVE 214
P KGE + + +VE
Sbjct: 135 PP--KGEAKAAASGPGVVE 151
>gb|ACG25761.1| RING-H2 finger protein ATL5A [Zea mays] gi|413945738|gb|AFW78387.1|
putative RING zinc finger domain superfamily protein
[Zea mays]
Length = 206
Score = 79.0 bits (193), Expect = 9e-13
Identities = 34/63 (53%), Positives = 41/63 (65%), Gaps = 4/63 (6%)
Frame = -3
Query: 441 DDNDEGS----YCAVCLNDVIGGDKCRELPKCGHVFHVECVDAWLECNGTCPLCRRQVTD 274
DD +EG+ CA+CL + G+K R LP+CGH FHV CVDAWL G+CP CRR V D
Sbjct: 115 DDEEEGAGSGDVCAICLGEFADGEKVRVLPRCGHAFHVPCVDAWLLSRGSCPTCRRPVMD 174
Query: 273 QLP 265
P
Sbjct: 175 AKP 177
>gb|AEJ08748.1| RSI6 [Solanum tuberosum]
Length = 261
Score = 78.6 bits (192), Expect = 1e-12
Identities = 31/60 (51%), Positives = 42/60 (70%)
Frame = -3
Query: 453 PFTADDNDEGSYCAVCLNDVIGGDKCRELPKCGHVFHVECVDAWLECNGTCPLCRRQVTD 274
PF D +G C+VCL++V G+K R LPKC H FHV+C+D WL+ + TCPLCR V++
Sbjct: 90 PFDTKDFKDGLECSVCLSEVCEGEKARLLPKCNHGFHVDCIDMWLQSHSTCPLCRNPVSE 149
>ref|XP_003565492.1| PREDICTED: RING-H2 finger protein ATL1-like [Brachypodium
distachyon]
Length = 219
Score = 78.6 bits (192), Expect = 1e-12
Identities = 32/47 (68%), Positives = 37/47 (78%)
Frame = -3
Query: 423 SYCAVCLNDVIGGDKCRELPKCGHVFHVECVDAWLECNGTCPLCRRQ 283
S CAVCL+++ GDK RELP CGHVFHV+CVDAWL TCPLCR +
Sbjct: 114 SDCAVCLSELTDGDKVRELPNCGHVFHVDCVDAWLRSTTTCPLCRAE 160