BLASTX nr result
ID: Atropa21_contig00012156
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00012156
(635 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004229698.1| PREDICTED: RING-H2 finger protein ATL73-like... 197 2e-48
ref|XP_006354621.1| PREDICTED: RING-H2 finger protein ATL73-like... 176 4e-42
ref|XP_004229697.1| PREDICTED: RING-H2 finger protein ATL34-like... 145 1e-32
dbj|BAD54611.1| RING finger-like [Oryza sativa Japonica Group] 80 6e-13
ref|NP_001174833.1| Os06g0534900 [Oryza sativa Japonica Group] g... 80 6e-13
gb|EEC80757.1| hypothetical protein OsI_23248 [Oryza sativa Indi... 80 6e-13
gb|EAZ37235.1| hypothetical protein OsJ_21573 [Oryza sativa Japo... 80 6e-13
ref|XP_003565491.1| PREDICTED: RING-H2 finger protein ATL32-like... 79 8e-13
gb|AFW76603.1| putative RING zinc finger domain superfamily prot... 79 1e-12
ref|NP_001237079.1| uncharacterized protein LOC100500375 [Glycin... 79 1e-12
ref|XP_004510577.1| PREDICTED: RING-H2 finger protein ATL3-like ... 79 1e-12
ref|XP_003548383.1| PREDICTED: RING-H2 finger protein ATL3-like ... 79 1e-12
ref|XP_002304259.2| hypothetical protein POPTR_0003s07090g [Popu... 77 3e-12
ref|XP_002326884.1| predicted protein [Populus trichocarpa] 77 3e-12
ref|XP_004303767.1| PREDICTED: RING-H2 finger protein ATL3-like ... 77 4e-12
dbj|BAJ85607.1| predicted protein [Hordeum vulgare subsp. vulgar... 77 4e-12
ref|NP_188049.1| putative RING-H2 finger protein ATL61 [Arabidop... 77 5e-12
gb|EMT12074.1| RING-H2 finger protein ATL2L [Aegilops tauschii] 77 5e-12
gb|AEJ07954.1| ring-H2 zinc finger protein [Sorghum propinquum] 77 5e-12
ref|XP_002436629.1| hypothetical protein SORBIDRAFT_10g006200 [S... 77 5e-12
>ref|XP_004229698.1| PREDICTED: RING-H2 finger protein ATL73-like [Solanum lycopersicum]
Length = 131
Score = 197 bits (502), Expect = 2e-48
Identities = 95/138 (68%), Positives = 109/138 (78%)
Frame = +3
Query: 27 VDFQIELFITATTTVFLICGIKFRWFRRPDHHLLPPLITNNNNEGRYCAVCLNDVIGGDK 206
+DFQ E+ + ATTT LICGIKFRWF RPD+HL PP +E RYCAVCL DVI G+
Sbjct: 1 MDFQFEVLLAATTTDLLICGIKFRWFCRPDNHLPPPF----TDEARYCAVCLYDVISGEN 56
Query: 207 CRKLPKCGHLFHVECVDAWLECNWTCPLCRRQVTDQLPRRQGENVISQAEDFIVEKIYNG 386
CRKLPKCGH+FHVECVDAWL+ N TCPLCRRQVTDQ +GE VIS+AEDFI+EKIYN
Sbjct: 57 CRKLPKCGHVFHVECVDAWLQSNRTCPLCRRQVTDQ---GRGETVISRAEDFILEKIYNP 113
Query: 387 ITEKVTMVLFGGMFLVHP 440
ITE VT+++ GGM L HP
Sbjct: 114 ITEIVTVLVSGGMSLAHP 131
>ref|XP_006354621.1| PREDICTED: RING-H2 finger protein ATL73-like [Solanum tuberosum]
Length = 131
Score = 176 bits (447), Expect = 4e-42
Identities = 84/138 (60%), Positives = 102/138 (73%)
Frame = +3
Query: 27 VDFQIELFITATTTVFLICGIKFRWFRRPDHHLLPPLITNNNNEGRYCAVCLNDVIGGDK 206
+D + E+ + ATT LICGIKFRWF R D++ PP ++GRYCAVCL DVI G+
Sbjct: 1 MDCKFEVLLAATTPDLLICGIKFRWFCRSDNYQPPPF----TDKGRYCAVCLYDVISGEN 56
Query: 207 CRKLPKCGHLFHVECVDAWLECNWTCPLCRRQVTDQLPRRQGENVISQAEDFIVEKIYNG 386
CRKLPKCGH+FH ECVD WL+ N TCPLCRR+VTDQ R+GE VIS+AEDFI+E IYN
Sbjct: 57 CRKLPKCGHVFHAECVDTWLQRNRTCPLCRREVTDQ---RRGETVISRAEDFILESIYNP 113
Query: 387 ITEKVTMVLFGGMFLVHP 440
ITE VT+++ GG HP
Sbjct: 114 ITEMVTILVCGGTSFAHP 131
>ref|XP_004229697.1| PREDICTED: RING-H2 finger protein ATL34-like [Solanum lycopersicum]
Length = 144
Score = 145 bits (365), Expect = 1e-32
Identities = 78/144 (54%), Positives = 94/144 (65%), Gaps = 9/144 (6%)
Frame = +3
Query: 33 FQIELFITATTT---VFLICGIKFRWFRRPDHHLLPPLITNNNNEGR-YCAVCLNDVIGG 200
F E T T T +FLI IKFRWF PD++L PP G YCAVCL++V GG
Sbjct: 3 FHFEPLATFTGTAIAIFLISTIKFRWFS-PDNYLPPPFNVVVEEIGYCYCAVCLDEVNGG 61
Query: 201 DKCRKLPKCGHLFHVECVDAWLECNWTCPLCRRQVTDQLPRRQGEN-----VISQAEDFI 365
DKCR+LPKCGH FH CVDAWLE NWTCP+CRRQVTD+LP+RQG+N V+S+ E+FI
Sbjct: 62 DKCRQLPKCGHAFHAMCVDAWLEWNWTCPICRRQVTDELPKRQGQNTLFSFVLSRCEEFI 121
Query: 366 VEKIYNGITEKVTMVLFGGMFLVH 437
+ N E+ +VLF L H
Sbjct: 122 AK--INTRAEEFMLVLFDSGVLGH 143
>dbj|BAD54611.1| RING finger-like [Oryza sativa Japonica Group]
Length = 423
Score = 79.7 bits (195), Expect = 6e-13
Identities = 30/52 (57%), Positives = 39/52 (75%)
Frame = +3
Query: 159 GRYCAVCLNDVIGGDKCRKLPKCGHLFHVECVDAWLECNWTCPLCRRQVTDQ 314
G CAVCL DV+ G+ R+LP CGHLFHV+C+D WL + TCPLCRR ++ +
Sbjct: 145 GALCAVCLEDVVAGETVRRLPSCGHLFHVDCIDMWLHAHRTCPLCRRDLSPE 196
Score = 73.9 bits (180), Expect = 4e-11
Identities = 30/47 (63%), Positives = 34/47 (72%)
Frame = +3
Query: 159 GRYCAVCLNDVIGGDKCRKLPKCGHLFHVECVDAWLECNWTCPLCRR 299
G CAVCL D+ GG+ R+LP CGHLFH +CVD WL TCPLCRR
Sbjct: 355 GVLCAVCLEDLRGGEMVRRLPACGHLFHEDCVDVWLRVRRTCPLCRR 401
>ref|NP_001174833.1| Os06g0534900 [Oryza sativa Japonica Group]
gi|255677117|dbj|BAH93561.1| Os06g0534900 [Oryza sativa
Japonica Group]
Length = 412
Score = 79.7 bits (195), Expect = 6e-13
Identities = 30/52 (57%), Positives = 39/52 (75%)
Frame = +3
Query: 159 GRYCAVCLNDVIGGDKCRKLPKCGHLFHVECVDAWLECNWTCPLCRRQVTDQ 314
G CAVCL DV+ G+ R+LP CGHLFHV+C+D WL + TCPLCRR ++ +
Sbjct: 145 GALCAVCLEDVVAGETVRRLPSCGHLFHVDCIDMWLHAHRTCPLCRRDLSPE 196
Score = 73.9 bits (180), Expect = 4e-11
Identities = 30/47 (63%), Positives = 34/47 (72%)
Frame = +3
Query: 159 GRYCAVCLNDVIGGDKCRKLPKCGHLFHVECVDAWLECNWTCPLCRR 299
G CAVCL D+ GG+ R+LP CGHLFH +CVD WL TCPLCRR
Sbjct: 344 GVLCAVCLEDLRGGEMVRRLPACGHLFHEDCVDVWLRVRRTCPLCRR 390
>gb|EEC80757.1| hypothetical protein OsI_23248 [Oryza sativa Indica Group]
Length = 210
Score = 79.7 bits (195), Expect = 6e-13
Identities = 30/52 (57%), Positives = 39/52 (75%)
Frame = +3
Query: 159 GRYCAVCLNDVIGGDKCRKLPKCGHLFHVECVDAWLECNWTCPLCRRQVTDQ 314
G CAVCL DV+ G+ R+LP CGHLFHV+C+D WL + TCPLCRR ++ +
Sbjct: 134 GALCAVCLEDVVAGETVRRLPSCGHLFHVDCIDMWLHAHRTCPLCRRDLSPE 185
>gb|EAZ37235.1| hypothetical protein OsJ_21573 [Oryza sativa Japonica Group]
Length = 218
Score = 79.7 bits (195), Expect = 6e-13
Identities = 30/52 (57%), Positives = 39/52 (75%)
Frame = +3
Query: 159 GRYCAVCLNDVIGGDKCRKLPKCGHLFHVECVDAWLECNWTCPLCRRQVTDQ 314
G CAVCL DV+ G+ R+LP CGHLFHV+C+D WL + TCPLCRR ++ +
Sbjct: 145 GALCAVCLEDVVAGETVRRLPSCGHLFHVDCIDMWLHAHRTCPLCRRDLSPE 196
>ref|XP_003565491.1| PREDICTED: RING-H2 finger protein ATL32-like [Brachypodium
distachyon]
Length = 204
Score = 79.3 bits (194), Expect = 8e-13
Identities = 33/61 (54%), Positives = 41/61 (67%)
Frame = +3
Query: 168 CAVCLNDVIGGDKCRKLPKCGHLFHVECVDAWLECNWTCPLCRRQVTDQLPRRQGENVIS 347
CAVCL+++ GDK R+LP CGH+FH+ECVDAWL TCPLCR + P GE +
Sbjct: 123 CAVCLSELADGDKVRELPNCGHVFHLECVDAWLRSRTTCPLCRAEAESPGPMGNGEAEAA 182
Query: 348 Q 350
Q
Sbjct: 183 Q 183
>gb|AFW76603.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 331
Score = 79.0 bits (193), Expect = 1e-12
Identities = 35/66 (53%), Positives = 43/66 (65%), Gaps = 3/66 (4%)
Frame = +3
Query: 141 TNNNNEGRYCAVCLNDVIGGDKCRKLPKCGHLFHVECVDAWLECNWTCPLCRRQV---TD 311
T ++ E CAVCL++V G+K R LPKCGH FHVEC+D W + TCPLCR V D
Sbjct: 124 TKSSKEALECAVCLSEVADGEKVRTLPKCGHAFHVECIDMWFHSHDTCPLCRAPVGGDLD 183
Query: 312 QLPRRQ 329
LPR +
Sbjct: 184 ALPREE 189
>ref|NP_001237079.1| uncharacterized protein LOC100500375 [Glycine max]
gi|255630157|gb|ACU15432.1| unknown [Glycine max]
Length = 144
Score = 79.0 bits (193), Expect = 1e-12
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 9/96 (9%)
Frame = +3
Query: 144 NNNNEGRYCAVCLNDVIGGDKCRKLPKCGHLFHVECVDAWLECNWTCPLCRRQVTDQLPR 323
N E YC+VCL+ + G+K + LP C H +HV+C+ AWL+ + TCPLCR +TD + +
Sbjct: 42 NEEKESDYCSVCLSQICKGEKAKSLPVCNHRYHVDCIGAWLKNHTTCPLCRNNITDHITQ 101
Query: 324 RQGE---------NVISQAEDFIVEKIYNGITEKVT 404
+ + N+I D +V +Y + +T
Sbjct: 102 KHKQVKSLGESLFNLIQSFSDLLVAILYMMLPSTIT 137
>ref|XP_004510577.1| PREDICTED: RING-H2 finger protein ATL3-like [Cicer arietinum]
Length = 331
Score = 78.6 bits (192), Expect = 1e-12
Identities = 33/68 (48%), Positives = 43/68 (63%)
Frame = +3
Query: 156 EGRYCAVCLNDVIGGDKCRKLPKCGHLFHVECVDAWLECNWTCPLCRRQVTDQLPRRQGE 335
+G CAVCL D++ G+K R LPKC H FHV+C+D W + + TCPLCR V+ +
Sbjct: 111 DGLECAVCLCDIVEGEKTRLLPKCNHGFHVDCIDMWFQSHSTCPLCRNPVSISCESSKPN 170
Query: 336 NVISQAED 359
N IS ED
Sbjct: 171 NTISNGED 178
>ref|XP_003548383.1| PREDICTED: RING-H2 finger protein ATL3-like [Glycine max]
Length = 319
Score = 78.6 bits (192), Expect = 1e-12
Identities = 33/69 (47%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Frame = +3
Query: 156 EGRYCAVCLNDVIGGDKCRKLPKCGHLFHVECVDAWLECNWTCPLCRRQVTDQLPR-RQG 332
EG CAVCL++++ G+K R LPKC H FHV+C+D W + TCPLCR VT + + +
Sbjct: 104 EGLECAVCLSEIVEGEKLRLLPKCNHGFHVDCIDMWFHSHSTCPLCRNPVTFESSKIEEN 163
Query: 333 ENVISQAED 359
NV+ +ED
Sbjct: 164 NNVLGSSED 172
>ref|XP_002304259.2| hypothetical protein POPTR_0003s07090g [Populus trichocarpa]
gi|550342602|gb|EEE79238.2| hypothetical protein
POPTR_0003s07090g [Populus trichocarpa]
Length = 277
Score = 77.4 bits (189), Expect = 3e-12
Identities = 35/79 (44%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Frame = +3
Query: 126 LPPLITNNNN--EGRYCAVCLNDVIGGDKCRKLPKCGHLFHVECVDAWLECNWTCPLCRR 299
LP +I + + +G CAVCL+DV+ G+K R LPKC H FH +C+D W + + TCPLCR
Sbjct: 83 LPVVIFQSKDFPDGLECAVCLSDVVEGEKARLLPKCNHGFHHDCIDMWFQSHSTCPLCRS 142
Query: 300 QVTDQLPRRQGENVISQAE 356
V Q G N ++ E
Sbjct: 143 SVAPQAQGSSGNNNLNDLE 161
>ref|XP_002326884.1| predicted protein [Populus trichocarpa]
Length = 144
Score = 77.4 bits (189), Expect = 3e-12
Identities = 34/66 (51%), Positives = 44/66 (66%)
Frame = +3
Query: 108 RPDHHLLPPLITNNNNEGRYCAVCLNDVIGGDKCRKLPKCGHLFHVECVDAWLECNWTCP 287
R HH I N++ E YC VCL++V+ G++ RKL KC H FHV C+DAW + + TCP
Sbjct: 55 RQKHHP----IKNDDYETPYCVVCLHEVVDGERLRKLLKCKHCFHVACIDAWFQSHSTCP 110
Query: 288 LCRRQV 305
LCR QV
Sbjct: 111 LCRNQV 116
>ref|XP_004303767.1| PREDICTED: RING-H2 finger protein ATL3-like [Fragaria vesca subsp.
vesca]
Length = 303
Score = 77.0 bits (188), Expect = 4e-12
Identities = 31/62 (50%), Positives = 41/62 (66%)
Frame = +3
Query: 156 EGRYCAVCLNDVIGGDKCRKLPKCGHLFHVECVDAWLECNWTCPLCRRQVTDQLPRRQGE 335
EG CAVCL+D++ G+K R LPKC H FHVEC+D W + + TCPLCR V + R
Sbjct: 104 EGLECAVCLSDLVQGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRNAVVPEAVARSDS 163
Query: 336 NV 341
++
Sbjct: 164 SI 165
>dbj|BAJ85607.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326533222|dbj|BAJ93583.1| predicted protein [Hordeum
vulgare subsp. vulgare]
Length = 253
Score = 77.0 bits (188), Expect = 4e-12
Identities = 35/92 (38%), Positives = 49/92 (53%)
Frame = +3
Query: 126 LPPLITNNNNEGRYCAVCLNDVIGGDKCRKLPKCGHLFHVECVDAWLECNWTCPLCRRQV 305
LP + + CAVC+ ++ G+ R LP+CGH FHVECVD WL + TCPLCR V
Sbjct: 78 LPRRVVAQGDPAADCAVCITELAAGEAARLLPRCGHSFHVECVDMWLRSHSTCPLCRCAV 137
Query: 306 TDQLPRRQGENVISQAEDFIVEKIYNGITEKV 401
D+ P Q ++ F ++ G + V
Sbjct: 138 ADEAPTVQPPEADPESPIFPTNVLFFGSQDAV 169
>ref|NP_188049.1| putative RING-H2 finger protein ATL61 [Arabidopsis thaliana]
gi|68565311|sp|Q9LUL6.1|ATL61_ARATH RecName:
Full=Putative RING-H2 finger protein ATL61
gi|9279580|dbj|BAB01038.1| unnamed protein product
[Arabidopsis thaliana] gi|332641980|gb|AEE75501.1|
putative RING-H2 finger protein ATL61 [Arabidopsis
thaliana]
Length = 204
Score = 76.6 bits (187), Expect = 5e-12
Identities = 32/71 (45%), Positives = 47/71 (66%), Gaps = 3/71 (4%)
Frame = +3
Query: 132 PLITNNNNEGRY---CAVCLNDVIGGDKCRKLPKCGHLFHVECVDAWLECNWTCPLCRRQ 302
P++ N + +Y C VCL+++ GDK R LP C H FHVEC+D+WL+ N TCP+CR++
Sbjct: 73 PIVDFNTKDFKYVLECVVCLSELADGDKARVLPSCDHWFHVECIDSWLQSNSTCPICRKR 132
Query: 303 VTDQLPRRQGE 335
V + R + E
Sbjct: 133 VCLKQSRTRPE 143
>gb|EMT12074.1| RING-H2 finger protein ATL2L [Aegilops tauschii]
Length = 208
Score = 76.6 bits (187), Expect = 5e-12
Identities = 33/56 (58%), Positives = 39/56 (69%)
Frame = +3
Query: 168 CAVCLNDVIGGDKCRKLPKCGHLFHVECVDAWLECNWTCPLCRRQVTDQLPRRQGE 335
CAVCL ++ GD+ R+LP CGHLFH+ECVDAWL TCPLCR Q LP G+
Sbjct: 108 CAVCLAELADGDEARELPNCGHLFHLECVDAWLRTRTTCPLCRAQAAG-LPGENGK 162
>gb|AEJ07954.1| ring-H2 zinc finger protein [Sorghum propinquum]
Length = 326
Score = 76.6 bits (187), Expect = 5e-12
Identities = 37/86 (43%), Positives = 48/86 (55%), Gaps = 7/86 (8%)
Frame = +3
Query: 168 CAVCLNDVIGGDKCRKLPKCGHLFHVECVDAWLECNWTCPLCRRQV-------TDQLPRR 326
CAVCL++V G+K R LPKCGH FHVEC+D W + TCPLCR V D LPR
Sbjct: 107 CAVCLSEVADGEKVRTLPKCGHGFHVECIDMWFHSHDTCPLCRAPVGGAGAGELDALPRE 166
Query: 327 QGENVISQAEDFIVEKIYNGITEKVT 404
+ + F ++ G ++VT
Sbjct: 167 EPSGASLEFPVFPTNVLFWGTNDEVT 192
>ref|XP_002436629.1| hypothetical protein SORBIDRAFT_10g006200 [Sorghum bicolor]
gi|241914852|gb|EER87996.1| hypothetical protein
SORBIDRAFT_10g006200 [Sorghum bicolor]
Length = 357
Score = 76.6 bits (187), Expect = 5e-12
Identities = 37/86 (43%), Positives = 48/86 (55%), Gaps = 7/86 (8%)
Frame = +3
Query: 168 CAVCLNDVIGGDKCRKLPKCGHLFHVECVDAWLECNWTCPLCRRQV-------TDQLPRR 326
CAVCL++V G+K R LPKCGH FHVEC+D W + TCPLCR V D LPR
Sbjct: 140 CAVCLSEVADGEKVRTLPKCGHGFHVECIDMWFHSHDTCPLCRAPVGGAGAGELDALPRE 199
Query: 327 QGENVISQAEDFIVEKIYNGITEKVT 404
+ + F ++ G ++VT
Sbjct: 200 EPSGASLEFPVFPTNVLFWGTNDEVT 225