BLASTX nr result
ID: Atropa21_contig00011955
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00011955
(792 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004244115.1| PREDICTED: pentatricopeptide repeat-containi... 131 2e-28
ref|XP_006346263.1| PREDICTED: pentatricopeptide repeat-containi... 125 1e-26
ref|XP_006470533.1| PREDICTED: pentatricopeptide repeat-containi... 85 3e-14
ref|XP_006446305.1| hypothetical protein CICLE_v100144561mg, par... 84 6e-14
ref|XP_004301453.1| PREDICTED: pentatricopeptide repeat-containi... 83 1e-13
gb|EMJ27934.1| hypothetical protein PRUPE_ppa019161mg [Prunus pe... 80 6e-13
ref|XP_004294599.1| PREDICTED: pentatricopeptide repeat-containi... 77 5e-12
ref|XP_006367734.1| PREDICTED: probable pectin methyltransferase... 74 4e-11
ref|XP_004237922.1| PREDICTED: probable pectin methyltransferase... 74 4e-11
ref|XP_004237921.1| PREDICTED: probable pectin methyltransferase... 74 4e-11
gb|ESW12361.1| hypothetical protein PHAVU_008G105900g [Phaseolus... 72 2e-10
ref|XP_003623229.1| Pentatricopeptide repeat-containing protein ... 72 3e-10
ref|XP_002313262.2| hypothetical protein POPTR_0009s07380g [Popu... 71 5e-10
ref|XP_004492420.1| PREDICTED: pentatricopeptide repeat-containi... 70 8e-10
gb|EXB80462.1| hypothetical protein L484_004369 [Morus notabilis] 70 1e-09
emb|CBI24253.3| unnamed protein product [Vitis vinifera] 70 1e-09
ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containi... 70 1e-09
ref|XP_006390005.1| hypothetical protein EUTSA_v10018220mg [Eutr... 70 1e-09
ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containi... 69 1e-09
gb|EMJ26374.1| hypothetical protein PRUPE_ppa002227mg [Prunus pe... 69 1e-09
>ref|XP_004244115.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Solanum lycopersicum]
Length = 737
Score = 131 bits (330), Expect = 2e-28
Identities = 65/72 (90%), Positives = 68/72 (94%)
Frame = -3
Query: 790 LLHKMASKGIELDLGLTSTILECLCNVSEDLNVEEMLPNVSQKNSEGFSIPCSELLKKLQ 611
LLHKMA+KGIELDLGLTSTILECLCN+SEDLNVEE+LPN SQK SEGFSIPCSELL KLQ
Sbjct: 666 LLHKMAAKGIELDLGLTSTILECLCNISEDLNVEELLPNFSQKKSEGFSIPCSELLMKLQ 725
Query: 610 KRLPELQLDSAL 575
K LPELQLDSAL
Sbjct: 726 KSLPELQLDSAL 737
>ref|XP_006346263.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Solanum tuberosum]
Length = 737
Score = 125 bits (315), Expect = 1e-26
Identities = 62/72 (86%), Positives = 67/72 (93%)
Frame = -3
Query: 790 LLHKMASKGIELDLGLTSTILECLCNVSEDLNVEEMLPNVSQKNSEGFSIPCSELLKKLQ 611
LL KMA+KGIELDLGLTSTIL+CLCN+SEDLNVEE+LPN SQK SEGFSIPCSELL KLQ
Sbjct: 666 LLRKMAAKGIELDLGLTSTILQCLCNISEDLNVEELLPNFSQKKSEGFSIPCSELLMKLQ 725
Query: 610 KRLPELQLDSAL 575
K LP+LQLDSAL
Sbjct: 726 KSLPKLQLDSAL 737
>ref|XP_006470533.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like isoform X1 [Citrus sinensis]
gi|568832635|ref|XP_006470534.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g28010-like isoform X2 [Citrus sinensis]
Length = 721
Score = 85.1 bits (209), Expect = 3e-14
Identities = 41/71 (57%), Positives = 54/71 (76%)
Frame = -3
Query: 790 LLHKMASKGIELDLGLTSTILECLCNVSEDLNVEEMLPNVSQKNSEGFSIPCSELLKKLQ 611
L+H+MA KG+ LD LTSTIL CLCN+SEDL+V ++ P SQ+ S+G SI C +LL KLQ
Sbjct: 651 LIHEMADKGVHLDQELTSTILVCLCNISEDLDVAKLFPTFSQETSKGKSISCKDLLLKLQ 710
Query: 610 KRLPELQLDSA 578
+ PEL+L +A
Sbjct: 711 EYRPELRLHAA 721
>ref|XP_006446305.1| hypothetical protein CICLE_v100144561mg, partial [Citrus
clementina] gi|557548916|gb|ESR59545.1| hypothetical
protein CICLE_v100144561mg, partial [Citrus clementina]
Length = 162
Score = 84.0 bits (206), Expect = 6e-14
Identities = 41/71 (57%), Positives = 54/71 (76%)
Frame = -3
Query: 790 LLHKMASKGIELDLGLTSTILECLCNVSEDLNVEEMLPNVSQKNSEGFSIPCSELLKKLQ 611
L+H+MA KG+ LD LTSTIL CLCN+SEDL+V ++ P SQ+ S+G SI C +LL KLQ
Sbjct: 92 LIHEMADKGVHLDQELTSTILICLCNISEDLDVAKLFPTFSQETSKGKSISCKDLLLKLQ 151
Query: 610 KRLPELQLDSA 578
+ PEL+L +A
Sbjct: 152 ECHPELRLHAA 162
>ref|XP_004301453.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Fragaria vesca subsp. vesca]
Length = 172
Score = 82.8 bits (203), Expect = 1e-13
Identities = 39/71 (54%), Positives = 54/71 (76%)
Frame = -3
Query: 790 LLHKMASKGIELDLGLTSTILECLCNVSEDLNVEEMLPNVSQKNSEGFSIPCSELLKKLQ 611
LLH+MA KG+ LD +TSTIL CLC +S++++V E+LPN S++ S G SI C+ELL K+
Sbjct: 102 LLHQMADKGVNLDKEITSTILVCLCQISDNVDVMEVLPNFSRETSNGISITCNELLMKVN 161
Query: 610 KRLPELQLDSA 578
K PEL+L +A
Sbjct: 162 KSYPELKLCAA 172
>gb|EMJ27934.1| hypothetical protein PRUPE_ppa019161mg [Prunus persica]
Length = 626
Score = 80.5 bits (197), Expect = 6e-13
Identities = 39/68 (57%), Positives = 51/68 (75%)
Frame = -3
Query: 790 LLHKMASKGIELDLGLTSTILECLCNVSEDLNVEEMLPNVSQKNSEGFSIPCSELLKKLQ 611
LLH+MA KG+ LD +TSTIL CLC +S+D +V ++LP SQ+ S+G SI C+ELL KL
Sbjct: 559 LLHQMADKGVILDSEITSTILSCLCQISDDYDVMKILPTFSQETSKGASISCNELLMKLN 618
Query: 610 KRLPELQL 587
K PEL+L
Sbjct: 619 KCYPELKL 626
>ref|XP_004294599.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Fragaria vesca subsp. vesca]
Length = 726
Score = 77.4 bits (189), Expect = 5e-12
Identities = 37/71 (52%), Positives = 52/71 (73%)
Frame = -3
Query: 790 LLHKMASKGIELDLGLTSTILECLCNVSEDLNVEEMLPNVSQKNSEGFSIPCSELLKKLQ 611
+LH+MA KG+ LD +TSTIL CLC +S+D++V E+LP S+ S+ SI C+ELL K+
Sbjct: 656 MLHQMADKGVVLDKYITSTILACLCQISDDVDVMEVLPTFSKDTSKELSITCNELLMKVN 715
Query: 610 KRLPELQLDSA 578
K PEL+L +A
Sbjct: 716 KSYPELKLCAA 726
>ref|XP_006367734.1| PREDICTED: probable pectin methyltransferase QUA2-like [Solanum
tuberosum]
Length = 697
Score = 74.3 bits (181), Expect = 4e-11
Identities = 34/49 (69%), Positives = 41/49 (83%), Gaps = 2/49 (4%)
Frame = -1
Query: 480 AGRPGVGPSICSKDHD--SLHHRSIKLCIAGTQSRRWIPIEEKSKWPAR 340
A RPGVGPSICSK D S ++R ++ CIAGTQSRRWIPIEE++KWP+R
Sbjct: 439 ARRPGVGPSICSKGQDIESPYYRPLQACIAGTQSRRWIPIEERTKWPSR 487
>ref|XP_004237922.1| PREDICTED: probable pectin methyltransferase QUA2-like isoform 2
[Solanum lycopersicum]
Length = 663
Score = 74.3 bits (181), Expect = 4e-11
Identities = 34/49 (69%), Positives = 41/49 (83%), Gaps = 2/49 (4%)
Frame = -1
Query: 480 AGRPGVGPSICSKDHD--SLHHRSIKLCIAGTQSRRWIPIEEKSKWPAR 340
A RPGVGPSICSK D S ++R ++ CIAGTQSRRWIPIEE++KWP+R
Sbjct: 405 ARRPGVGPSICSKGQDIESPYYRPLQACIAGTQSRRWIPIEERTKWPSR 453
>ref|XP_004237921.1| PREDICTED: probable pectin methyltransferase QUA2-like isoform 1
[Solanum lycopersicum]
Length = 697
Score = 74.3 bits (181), Expect = 4e-11
Identities = 34/49 (69%), Positives = 41/49 (83%), Gaps = 2/49 (4%)
Frame = -1
Query: 480 AGRPGVGPSICSKDHD--SLHHRSIKLCIAGTQSRRWIPIEEKSKWPAR 340
A RPGVGPSICSK D S ++R ++ CIAGTQSRRWIPIEE++KWP+R
Sbjct: 439 ARRPGVGPSICSKGQDIESPYYRPLQACIAGTQSRRWIPIEERTKWPSR 487
>gb|ESW12361.1| hypothetical protein PHAVU_008G105900g [Phaseolus vulgaris]
gi|561013501|gb|ESW12362.1| hypothetical protein
PHAVU_008G105900g [Phaseolus vulgaris]
gi|561013502|gb|ESW12363.1| hypothetical protein
PHAVU_008G105900g [Phaseolus vulgaris]
Length = 717
Score = 72.4 bits (176), Expect = 2e-10
Identities = 39/71 (54%), Positives = 48/71 (67%), Gaps = 3/71 (4%)
Frame = -3
Query: 790 LLHKMASKGIELDLGLTSTILECLCNVSEDLNVEEMLPNVSQKN---SEGFSIPCSELLK 620
LLH+MA K + LD LTSTIL CLC +S DL+VE++LPN SQ + S+G SI C E
Sbjct: 643 LLHQMADKDVVLDSKLTSTILACLCQMSRDLDVEKILPNFSQHSEHTSKGTSIKCQEFFM 702
Query: 619 KLQKRLPELQL 587
KL PEL+L
Sbjct: 703 KLNDAHPELKL 713
>ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498244|gb|AES79447.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 770
Score = 71.6 bits (174), Expect = 3e-10
Identities = 35/65 (53%), Positives = 47/65 (72%)
Frame = -3
Query: 790 LLHKMASKGIELDLGLTSTILECLCNVSEDLNVEEMLPNVSQKNSEGFSIPCSELLKKLQ 611
+L +MA K + LD LTSTIL CLCN+S+D+++E++LP SQ S G SI C+ELL KL
Sbjct: 643 MLQQMADKDVVLDSKLTSTILACLCNMSKDVDIEKILPKFSQHTSVGASIKCNELLMKLN 702
Query: 610 KRLPE 596
K P+
Sbjct: 703 KVHPD 707
>ref|XP_002313262.2| hypothetical protein POPTR_0009s07380g [Populus trichocarpa]
gi|550331224|gb|EEE87217.2| hypothetical protein
POPTR_0009s07380g [Populus trichocarpa]
Length = 648
Score = 70.9 bits (172), Expect = 5e-10
Identities = 36/71 (50%), Positives = 51/71 (71%)
Frame = -3
Query: 790 LLHKMASKGIELDLGLTSTILECLCNVSEDLNVEEMLPNVSQKNSEGFSIPCSELLKKLQ 611
LL +MA G+ LDL +T++IL LCN +E L+V E+LPN S ++S G SI C +LL K+Q
Sbjct: 578 LLRQMADMGVILDLEITNSILTFLCNSAEHLHVMELLPNFSSESSGGTSISCDKLLMKIQ 637
Query: 610 KRLPELQLDSA 578
K P+LQ+ +A
Sbjct: 638 KFNPKLQISAA 648
>ref|XP_004492420.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Cicer arietinum]
Length = 721
Score = 70.1 bits (170), Expect = 8e-10
Identities = 34/68 (50%), Positives = 48/68 (70%)
Frame = -3
Query: 790 LLHKMASKGIELDLGLTSTILECLCNVSEDLNVEEMLPNVSQKNSEGFSIPCSELLKKLQ 611
+L +MA K + LD LTS IL C+C VS+D++++++LP SQ S G +I C+ELL KL
Sbjct: 651 VLQQMADKDVVLDSKLTSIILACICKVSKDIDIDKILPKFSQHTSVGSNIKCNELLMKLN 710
Query: 610 KRLPELQL 587
K P+LQL
Sbjct: 711 KVHPQLQL 718
>gb|EXB80462.1| hypothetical protein L484_004369 [Morus notabilis]
Length = 718
Score = 69.7 bits (169), Expect = 1e-09
Identities = 35/68 (51%), Positives = 49/68 (72%)
Frame = -3
Query: 790 LLHKMASKGIELDLGLTSTILECLCNVSEDLNVEEMLPNVSQKNSEGFSIPCSELLKKLQ 611
L H++A+KG+ LD LT+TIL C+C+ SED++V E+LP SQ+ S+G +I +ELL KL
Sbjct: 648 LFHQIANKGVALDQVLTNTILMCICHCSEDVDVMEILPTFSQEASKGKNILSNELLAKLD 707
Query: 610 KRLPELQL 587
K P L L
Sbjct: 708 KSFPRLGL 715
>emb|CBI24253.3| unnamed protein product [Vitis vinifera]
Length = 582
Score = 69.7 bits (169), Expect = 1e-09
Identities = 35/68 (51%), Positives = 48/68 (70%)
Frame = -3
Query: 790 LLHKMASKGIELDLGLTSTILECLCNVSEDLNVEEMLPNVSQKNSEGFSIPCSELLKKLQ 611
LLH+MA+KG LD + STIL CLC+ ++++V E+LP Q SEG SI C+ELL +L
Sbjct: 512 LLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELLPTFFQGTSEGASISCNELLMQLH 571
Query: 610 KRLPELQL 587
+ P+LQL
Sbjct: 572 QSHPKLQL 579
>ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Vitis vinifera]
Length = 728
Score = 69.7 bits (169), Expect = 1e-09
Identities = 35/68 (51%), Positives = 48/68 (70%)
Frame = -3
Query: 790 LLHKMASKGIELDLGLTSTILECLCNVSEDLNVEEMLPNVSQKNSEGFSIPCSELLKKLQ 611
LLH+MA+KG LD + STIL CLC+ ++++V E+LP Q SEG SI C+ELL +L
Sbjct: 658 LLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELLPTFFQGTSEGASISCNELLMQLH 717
Query: 610 KRLPELQL 587
+ P+LQL
Sbjct: 718 QSHPKLQL 725
>ref|XP_006390005.1| hypothetical protein EUTSA_v10018220mg [Eutrema salsugineum]
gi|557086439|gb|ESQ27291.1| hypothetical protein
EUTSA_v10018220mg [Eutrema salsugineum]
Length = 684
Score = 69.7 bits (169), Expect = 1e-09
Identities = 28/53 (52%), Positives = 43/53 (81%), Gaps = 2/53 (3%)
Frame = -1
Query: 483 NAGRPGVGPSICSKDHD--SLHHRSIKLCIAGTQSRRWIPIEEKSKWPARGGV 331
+A +PGVGPS+CSK HD + ++R +++CI GT+SRRWIPIE +++WP+R +
Sbjct: 423 SARKPGVGPSVCSKGHDVETPYYRPLQMCIGGTRSRRWIPIEGRTRWPSRSNM 475
>ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like isoform X1 [Glycine max]
gi|571466354|ref|XP_006583637.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g28010-like isoform X2 [Glycine max]
Length = 703
Score = 69.3 bits (168), Expect = 1e-09
Identities = 37/71 (52%), Positives = 51/71 (71%), Gaps = 3/71 (4%)
Frame = -3
Query: 790 LLHKMASKGIELDLGLTSTILECLCNVSEDLNVEEMLPNVSQKN---SEGFSIPCSELLK 620
LLH+MA K + LD LTSTIL CLC++S +L+VE++LP SQ++ S+G +I C ELL
Sbjct: 629 LLHQMADKDVVLDSKLTSTILACLCHMSRNLDVEKILPKFSQQSEHTSKGTTIKCHELLM 688
Query: 619 KLQKRLPELQL 587
+L PEL+L
Sbjct: 689 RLNNFHPELKL 699
>gb|EMJ26374.1| hypothetical protein PRUPE_ppa002227mg [Prunus persica]
Length = 698
Score = 69.3 bits (168), Expect = 1e-09
Identities = 30/47 (63%), Positives = 38/47 (80%), Gaps = 2/47 (4%)
Frame = -1
Query: 474 RPGVGPSICSKDHD--SLHHRSIKLCIAGTQSRRWIPIEEKSKWPAR 340
+PG GPSICSK HD S ++R ++ CI GTQSRRWIPIEE++ WP+R
Sbjct: 441 KPGSGPSICSKGHDVESPYYRPLQACIGGTQSRRWIPIEERTTWPSR 487