BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00011543
         (2925 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein A...   100   3e-18
ref|XP_006343440.1| PREDICTED: uncharacterized protein LOC102595...   100   5e-18
ref|XP_006338209.1| PREDICTED: putative ribonuclease H protein A...    99   1e-17
ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein A...    86   7e-14
ref|XP_006355175.1| PREDICTED: putative ribonuclease H protein A...    85   2e-13
ref|XP_006338863.1| PREDICTED: uncharacterized protein LOC102579...    81   3e-12
ref|XP_006354689.1| PREDICTED: uncharacterized protein LOC102605...    79   1e-11
ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596...    67   3e-08
ref|XP_006356960.1| PREDICTED: putative ribonuclease H protein A...    58   1e-07
ref|XP_004233852.1| PREDICTED: uncharacterized protein LOC101253...    65   2e-07
ref|XP_006358679.1| PREDICTED: uncharacterized protein LOC102578...    64   4e-07
ref|XP_006351095.1| PREDICTED: polygalacturonase-like [Solanum t...    64   5e-07
ref|YP_003316701.1| ribonuclease H [Thermanaerovibrio acidaminov...    64   5e-07
ref|XP_006352585.1| PREDICTED: uncharacterized protein LOC102588...    62   2e-06

>ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            tuberosum]
          Length = 885

 Score =  100 bits (250), Expect = 3e-18
 Identities = 55/119 (46%), Positives = 79/119 (66%), Gaps = 1/119 (0%)
 Frame = +1

Query: 2107 GNPGRSAYGFCARNADGNLIYAQAEEIGFITNTE-EAVAILEAIWWCRSNQVDCIIMQTD 2283
            GNPG S++GFC R+  G+LIYA+A+ IG  TN E E VAIL A+  C + ++  +I++TD
Sbjct: 718  GNPGLSSFGFCIRDDKGDLIYAKAKGIGIATNMEAETVAILTALRECSNRKMQKVIIETD 777

Query: 2284 SKILQNILAEGWKPLCNIAIWVEEIQEISRGMQIIFTRILREGNKMADALANQALDRGA 2460
            S  L+ I+ + W+    IA  VEEI+EI   ++   T I REGN +AD+LAN A++  A
Sbjct: 778  SLSLKKIIQQTWRVPWKIAEKVEEIREIMEKIKAKITHIFREGNSLADSLANIAIESQA 836


>ref|XP_006343440.1| PREDICTED: uncharacterized protein LOC102595406 [Solanum tuberosum]
          Length = 866

 Score =  100 bits (248), Expect = 5e-18
 Identities = 55/114 (48%), Positives = 73/114 (64%), Gaps = 1/114 (0%)
 Frame = +1

Query: 2107 GNPGRSAYGFCARNADGNLIYAQAEEIGFITNTE-EAVAILEAIWWCRSNQVDCIIMQTD 2283
            GNPG+S+Y +C R+ +GNLIYAQAEEI   TN E EAVAI EAI+ C +     + ++TD
Sbjct: 752  GNPGKSSYAYCLRDQEGNLIYAQAEEIPETTNVEAEAVAIKEAIYHCTTRGFSRVTIETD 811

Query: 2284 SKILQNILAEGWKPLCNIAIWVEEIQEISRGMQIIFTRILREGNKMADALANQA 2445
            S +L+NIL   W+   NI I VE+   + +   +    I REGN +AD LAN A
Sbjct: 812  SLLLKNILQGNWEIPWNIRIIVEDTLTLMQYSTVNIEHIYREGNTLADYLANYA 865


>ref|XP_006338209.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            tuberosum]
          Length = 198

 Score = 98.6 bits (244), Expect = 1e-17
 Identities = 53/116 (45%), Positives = 78/116 (67%), Gaps = 1/116 (0%)
 Frame = +1

Query: 2107 GNPGRSAYGFCARNADGNLIYAQAEEIGFITNTE-EAVAILEAIWWCRSNQVDCIIMQTD 2283
            GNPG SAYG+C RN++G+LI+  AE IG  TN E E  AILEAI +C + ++  II+++D
Sbjct: 37   GNPGISAYGYCLRNSNGDLIHVTAENIGITTNVEAEMRAILEAIRYCVNKKMRKIILESD 96

Query: 2284 SKILQNILAEGWKPLCNIAIWVEEIQEISRGMQIIFTRILREGNKMADALANQALD 2451
            S ++  I+ E WK L  IA   +E+++    +++    I REGNK+AD LAN A++
Sbjct: 97   SLLMVKIINEAWKVLWVIAEEFDELKQEMTKIEVKTQHIYREGNKLADYLANLAIN 152


>ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            tuberosum]
          Length = 1035

 Score = 86.3 bits (212), Expect = 7e-14
 Identities = 43/116 (37%), Positives = 71/116 (61%), Gaps = 1/116 (0%)
 Frame = +1

Query: 2107 GNPGRSAYGFCARNADGNLIYAQAEEIGFITNTE-EAVAILEAIWWCRSNQVDCIIMQTD 2283
            GNP  S+YG+C R+ +G+L+YA+A  IG  TN E EA  + +A+ +C  N +  + ++TD
Sbjct: 689  GNPRMSSYGYCIRDKNGDLLYAEAHNIGETTNMEAEATTVWKALQFCYENGLRKVRLETD 748

Query: 2284 SKILQNILAEGWKPLCNIAIWVEEIQEISRGMQIIFTRILREGNKMADALANQALD 2451
            S  LQN++   WK    +   +EEI EI + + +    + RE N++AD +AN  ++
Sbjct: 749  SLALQNMITRSWKIPWELVEKLEEIHEIMQQIDVQVCHVYREVNQLADFIANTTIN 804


>ref|XP_006355175.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            tuberosum]
          Length = 143

 Score = 85.1 bits (209), Expect = 2e-13
 Identities = 44/107 (41%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
 Frame = +1

Query: 2107 GNPGRSAYGFCARNADGNLIYAQAEEIGFITNTE-EAVAILEAIWWCRSNQVDCIIMQTD 2283
            GNP +S+YGFC RN  G L+YA+ + IG  TN + E++AI +A+ +C S     + ++TD
Sbjct: 37   GNPDQSSYGFCIRNHTGELLYAEVQSIGVTTNMDAESMAIWKALQYCLSQGFQQVSLETD 96

Query: 2284 SKILQNILAEGWKPLCNIAIWVEEIQEISRGMQIIFTRILREGNKMA 2424
            S  L+NIL   WK    +   VE+I EI   M +    I RE N++A
Sbjct: 97   SLTLKNILVRNWKTPWELVERVEDILEIMSHMDVTIKHIFREVNQLA 143


>ref|XP_006338863.1| PREDICTED: uncharacterized protein LOC102579795 [Solanum tuberosum]
          Length = 778

 Score = 80.9 bits (198), Expect = 3e-12
 Identities = 42/112 (37%), Positives = 69/112 (61%), Gaps = 1/112 (0%)
 Frame = +1

Query: 2107 GNPGRSAYGFCARNADGNLIYAQAEEIGFITNTE-EAVAILEAIWWCRSNQVDCIIMQTD 2283
            GNP  SA GFC RN +G  IY  ++E+GF T+ E E +A    + +C S+ +  +I++TD
Sbjct: 149  GNPRPSAGGFCIRNWNGEFIYTTSQELGFKTSLEAEVIAFERGLQFCMSHNLLPVILETD 208

Query: 2284 SKILQNILAEGWKPLCNIAIWVEEIQEISRGMQIIFTRILREGNKMADALAN 2439
            S I+  IL   W+   +I++ +++IQ + R  Q+  + + REGNK+ +  AN
Sbjct: 209  SLIVSKILDGIWETPWSISLLIKKIQWLRRDGQVEVSHVFREGNKVVNYFAN 260


>ref|XP_006354689.1| PREDICTED: uncharacterized protein LOC102605437 [Solanum tuberosum]
          Length = 333

 Score = 79.0 bits (193), Expect = 1e-11
 Identities = 46/113 (40%), Positives = 67/113 (59%), Gaps = 1/113 (0%)
 Frame = +1

Query: 2110 NPGRSAYGFCARNADGNLIYAQAEEIGFITNTE-EAVAILEAIWWCRSNQVDCIIMQTDS 2286
            NP  S+YGFC RN+ G+L+Y Q +EI   TN E EAVAI E +  C +  V    ++TDS
Sbjct: 178  NPEISSYGFCLRNSVGDLVYVQGKEIQEGTNLEVEAVAIREDLAHCVTKGVMKACLETDS 237

Query: 2287 KILQNILAEGWKPLCNIAIWVEEIQEISRGMQIIFTRILREGNKMADALANQA 2445
            ++L  IL   W+   +I + +E+I  + +   +    + REGN +AD LAN A
Sbjct: 238  QVLIKILTRIWEVPWSIVVIIEDIWGLFQECHVQIQHVYREGNTLADYLANLA 290


>ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596481 [Solanum tuberosum]
          Length = 1135

 Score = 67.4 bits (163), Expect = 3e-08
 Identities = 32/73 (43%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
 Frame = +1

Query: 2107 GNPGRSAYGFCARNADGNLIYAQAEEIGFITNTE-EAVAILEAIWWCRSNQVDCIIMQTD 2283
            GN G S+  F  R+ +G+LIYA+A+ IG  TN E EA+A+LEA+W+C+   +   I++TD
Sbjct: 1054 GNSGASSTSFVVRDEEGDLIYARAKGIGIATNMEAEALALLEAVWYCQEKDLKEPIIETD 1113

Query: 2284 SKILQNILAEGWK 2322
            S +L+ ++   WK
Sbjct: 1114 SLVLKKMVDNQWK 1126


>ref|XP_006356960.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 514

 Score = 58.2 bits (139), Expect(2) = 1e-07
 Identities = 29/86 (33%), Positives = 44/86 (51%)
 Frame = -3

Query: 988 LINIIEKLKELPDNSDSYKCRPNKNAIFSVKSCYNSLRRTEEMEQSWPWKIVWRLKALFP 809
           L   +E    L +  DS        A+FSVK  YN L   E+    WPWK +W+ +A  P
Sbjct: 337 LFGKLEGFSGLKEEEDSLTWIGGTKAVFSVKIAYNYLMDLEQFNDPWPWKEIWKARA--P 394

Query: 808 ARVTCFE*IVMHEVCLTQNQ*KRGSY 731
            +V CF  +V+ + CLT ++ +R  +
Sbjct: 395 FKVVCFTWLVVWKACLTHDKLQRRGF 420



 Score = 27.3 bits (59), Expect(2) = 1e-07
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -2

Query: 614 FLCLRATETPGLLLLHCSY 558
           FLC +  ET G L LHCS+
Sbjct: 427 FLCHQEAETNGHLFLHCSF 445


>ref|XP_004233852.1| PREDICTED: uncharacterized protein LOC101253557 [Solanum
            lycopersicum]
          Length = 13995

 Score = 64.7 bits (156), Expect = 2e-07
 Identities = 34/82 (41%), Positives = 58/82 (70%), Gaps = 3/82 (3%)
 Frame = +1

Query: 2110 NPGRSAYGFCARNADGNLIYAQAEEIGFI--TNTE-EAVAILEAIWWCRSNQVDCIIMQT 2280
            +P RS++ FC R+  G+++ AQA+EIG +  TNT+ EA+AIL+A+ +  + Q+D ++++T
Sbjct: 3186 DPRRSSWVFCVRDEQGDILQAQAQEIGELACTNTQAEAMAILQALKFIEATQMDRVVIKT 3245

Query: 2281 DSKILQNILAEGWKPLCNIAIW 2346
            DS +  NI+ + WK L  I I+
Sbjct: 3246 DSLLTNNIVDKSWKRLRLIEIF 3267


>ref|XP_006358679.1| PREDICTED: uncharacterized protein LOC102578253 [Solanum tuberosum]
          Length = 277

 Score = 63.9 bits (154), Expect = 4e-07
 Identities = 38/108 (35%), Positives = 58/108 (53%), Gaps = 1/108 (0%)
 Frame = +1

Query: 2116 GRSAYGFCARNADGNLIYAQAEEIGFIT-NTEEAVAILEAIWWCRSNQVDCIIMQTDSKI 2292
            G+S  G   R+ +G+ I+A +  +G  T NT EA A+L  + WC S  ++  I +TDS +
Sbjct: 162  GQSGSGGIIRDQEGDFIFAYSIPLGNGTSNTVEAEALLYGLQWCASKGMEMAIGETDSLL 221

Query: 2293 LQNILAEGWKPLCNIAIWVEEIQEISRGMQIIFTRILREGNKMADALA 2436
            L   +   WK    I+  V+EIQ++    +       +E NK ADALA
Sbjct: 222  LSKTIKREWKSPWKISNQVQEIQKMIEDHKFSIVHCFKEANKPADALA 269


>ref|XP_006351095.1| PREDICTED: polygalacturonase-like [Solanum tuberosum]
          Length = 603

 Score = 63.5 bits (153), Expect = 5e-07
 Identities = 33/102 (32%), Positives = 57/102 (55%), Gaps = 1/102 (0%)
 Frame = +1

Query: 2122 SAYGFCARNADGNLIYAQAEEIGFITNTE-EAVAILEAIWWCRSNQVDCIIMQTDSKILQ 2298
            S+  FC R++ G+L++ +AE I F    E E       +  C  N +  ++M+T+S I++
Sbjct: 487  SSKAFCVRDSQGSLVFVEAERIEFCDALEAEVTTFKNGLNHCVQNNLLPLVMETNSLIIK 546

Query: 2299 NILAEGWKPLCNIAIWVEEIQEISRGMQIIFTRILREGNKMA 2424
             IL   W+   NI++ +  +QEI +   ++   ILREGN +A
Sbjct: 547  RILDGDWEIPWNISVHIRYVQEILKEKGVVVAHILREGNTLA 588


>ref|YP_003316701.1| ribonuclease H [Thermanaerovibrio acidaminovorans DSM 6589]
            gi|502632347|ref|WP_012868935.1| ribonuclease H
            [Thermanaerovibrio acidaminovorans]
            gi|269099432|gb|ACZ18419.1| ribonuclease H
            [Thermanaerovibrio acidaminovorans DSM 6589]
          Length = 132

 Score = 63.5 bits (153), Expect = 5e-07
 Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 2/117 (1%)
 Frame = +1

Query: 2107 GNPGRSAYGFCARNADGNLIYAQAEEIGFITNTE-EAVAILEAIWWCRSNQVDCIIMQTD 2283
            GNPG +  G    + DG +++   E +G  TN E E  A++  +   RS  +D +I   D
Sbjct: 12   GNPGPAGAGALLEDEDGRVVWEHREYLGRRTNNEAEYWALIALLEEARSRGIDRLIAMGD 71

Query: 2284 SKILQNILAEGWK-PLCNIAIWVEEIQEISRGMQIIFTRILREGNKMADALANQALD 2451
            S+++ + +   WK  + ++      + E+S GM + F  I RE N+ AD L+NQA+D
Sbjct: 72   SQLVVSQVTRKWKINMPHLRELARRVWELSEGMDVSFRWIPREENRRADRLSNQAID 128


>ref|XP_006352585.1| PREDICTED: uncharacterized protein LOC102588593 [Solanum tuberosum]
          Length = 255

 Score = 61.6 bits (148), Expect = 2e-06
 Identities = 28/79 (35%), Positives = 47/79 (59%)
 Frame = -3

Query: 994 AQLINIIEKLKELPDNSDSYKCRPNKNAIFSVKSCYNSLRRTEEMEQSWPWKIVWRLKAL 815
           A L++ +     + ++ D+   + +K  IFSVKSCY SL   + ME  WPWK++W++K  
Sbjct: 42  AGLLHTLNAFPGVTESPDTPIWKMHKKGIFSVKSCYWSLNSNQAMEMEWPWKLIWKIK-- 99

Query: 814 FPARVTCFE*IVMHEVCLT 758
            P +V+ F  + + + CLT
Sbjct: 100 IPHKVSGFTWLAIRKACLT 118