BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00011481
         (1003 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein A...   165   5e-44
ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein A...   161   3e-41
ref|XP_006354689.1| PREDICTED: uncharacterized protein LOC102605...   151   4e-34
ref|XP_006338863.1| PREDICTED: uncharacterized protein LOC102579...   134   3e-31
ref|XP_006343440.1| PREDICTED: uncharacterized protein LOC102595...   110   1e-27
ref|XP_006355175.1| PREDICTED: putative ribonuclease H protein A...    97   1e-20
ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596...   105   2e-20
ref|XP_004243166.1| PREDICTED: putative ribonuclease H protein A...   103   1e-19
ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601...    91   1e-17
ref|XP_004253520.1| PREDICTED: putative ribonuclease H protein A...    91   2e-17
ref|XP_004253405.1| PREDICTED: putative ribonuclease H protein A...    95   5e-17
ref|XP_004253259.1| PREDICTED: putative ribonuclease H protein A...    95   5e-17
ref|XP_004239568.1| PREDICTED: putative ribonuclease H protein A...    95   5e-17
ref|XP_004253442.1| PREDICTED: putative ribonuclease H protein A...    94   8e-17
ref|XP_004228797.1| PREDICTED: putative ribonuclease H protein A...    94   8e-17
ref|XP_004253498.1| PREDICTED: putative ribonuclease H protein A...    92   2e-16
ref|XP_004244918.1| PREDICTED: putative ribonuclease H protein A...    92   3e-16
ref|XP_004253443.1| PREDICTED: putative ribonuclease H protein A...    91   5e-16
ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261...    91   7e-16
ref|XP_004253445.1| PREDICTED: putative ribonuclease H protein A...    90   1e-15

>ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            tuberosum]
          Length = 885

 Score =  165 bits (417), Expect(2) = 5e-44
 Identities = 79/198 (39%), Positives = 126/198 (63%), Gaps = 2/198 (1%)
 Frame = -3

Query: 1001 FSSFACINIERLQPQQIIVKWWTTSVSHRLKPIFQVMPAIIVWELWKRRNALKHGKQISI 822
            F+ FA INI+ +  QQ+I+ WW    + +L+ I++ +PAII+W LWKRRNALKH   IS 
Sbjct: 591  FAHFAGINIDGMHLQQLIISWWKHEATPKLQGIYKAIPAIIMWTLWKRRNALKHDSSISW 650

Query: 821  GRCIYHIFSTVQRLVQFRNPSIRLIPHKWSEVIQLLEGYRPGIKVTKVIWKPPPQGWILC 642
             R +  +   V+++V+ + P I+ +   W  +IQ L  Y+  I V +V WKPP   ++  
Sbjct: 651  ERMVEMVIEVVRKMVKSQFPWIKNMRWTWQAIIQRLNQYKRKIHVLRVTWKPPDDHYVKS 710

Query: 641  NTNGASSGNPGRGAYGFCVRNSAANLIYA*AEETGFASN--TETLTILEAIKWCTQNQLH 468
            NT+GA  GNPG  ++GFC+R+   +LIYA A+  G A+N   ET+ IL A++ C+  ++ 
Sbjct: 711  NTDGACRGNPGLSSFGFCIRDDKGDLIYAKAKGIGIATNMEAETVAILTALRECSNRKMQ 770

Query: 467  LINIQTDSQLIKRILVES 414
             + I+TDS  +K+I+ ++
Sbjct: 771  KVIIETDSLSLKKIIQQT 788



 Score = 40.8 bits (94), Expect(2) = 5e-44
 Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
 Frame = -1

Query: 361  EGVTDKVHSHPERANKLANSMENQALDKGAVRCQN-FMEMEVEHRRIISSDKAQIPYLRI 185
            E +  K+       N LA+S+ N A++  A    + F E+ ++ RRI++ DKAQIP LRI
Sbjct: 807  EKIKAKITHIFREGNSLADSLANIAIESQAEHQYSCFQELPLKERRILNIDKAQIPTLRI 866

Query: 184  RPQKL 170
            R + +
Sbjct: 867  RTRAI 871


>ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            tuberosum]
          Length = 1035

 Score =  161 bits (407), Expect(2) = 3e-41
 Identities = 72/198 (36%), Positives = 121/198 (61%), Gaps = 2/198 (1%)
 Frame = -3

Query: 1001 FSSFACINIERLQPQQIIVKWWTTSVSHRLKPIFQVMPAIIVWELWKRRNALKHGKQISI 822
            F+S+A I I  L  QQ+I KWW    S++L  I + + A+I+WELWKRRN+ +HGK+ + 
Sbjct: 562  FASYAGIIINGLNLQQLIFKWWDYKASNKLSQILKAVLAVIMWELWKRRNSYRHGKETTY 621

Query: 821  GRCIYHIFSTVQRLVQFRNPSIRLIPHKWSEVIQLLEGYRPGIKVTKVIWKPPPQGWILC 642
                Y     + +LV  + P I+ + + W +V+ +L+ Y+P +    V W+ P +GW+ C
Sbjct: 622  NNMYYQCQLILYQLVTIKFPWIKGLTYHWPQVVGMLQNYKPPLHYKVVRWRKPSEGWVTC 681

Query: 641  NTNGASSGNPGRGAYGFCVRNSAANLIYA*AEETGFASN--TETLTILEAIKWCTQNQLH 468
            NT+GAS GNP   +YG+C+R+   +L+YA A   G  +N   E  T+ +A+++C +N L 
Sbjct: 682  NTDGASKGNPRMSSYGYCIRDKNGDLLYAEAHNIGETTNMEAEATTVWKALQFCYENGLR 741

Query: 467  LINIQTDSQLIKRILVES 414
             + ++TDS  ++ ++  S
Sbjct: 742  KVRLETDSLALQNMITRS 759



 Score = 35.4 bits (80), Expect(2) = 3e-41
 Identities = 11/31 (35%), Positives = 21/31 (67%)
 Frame = -2

Query: 414 WKPPWNIASCIEEIHELGKELRIRFTHILKE 322
           WK PW +   +EEIHE+ +++ ++  H+ +E
Sbjct: 760 WKIPWELVEKLEEIHEIMQQIDVQVCHVYRE 790


>ref|XP_006354689.1| PREDICTED: uncharacterized protein LOC102605437 [Solanum tuberosum]
          Length = 333

 Score =  151 bits (381), Expect = 4e-34
 Identities = 73/195 (37%), Positives = 118/195 (60%), Gaps = 2/195 (1%)
 Frame = -3

Query: 1001 FSSFACINIERLQPQQIIVKWWTTSVSHRLKPIFQVMPAIIVWELWKRRNALKHGKQISI 822
            F++ A I++E LQ  Q+++KWWT+     LKP+ +V+P +++W LWKRRN LKHG+  S 
Sbjct: 51   FANVAGISLEGLQLSQVVIKWWTSDSCPILKPLMRVVPTVVIWNLWKRRNNLKHGRPSSY 110

Query: 821  GRCIYHIFSTVQRLVQFRNPSIRLIPHKWSEVIQLLEGYRPGIKVTKVIWKPPPQGWILC 642
               +Y + S + +L +   P ++  P KWS+++  LE ++P +    V WK PP+G + C
Sbjct: 111  NNLVYRVNSDLWKLGRTIYPKLQDFPTKWSDIVACLEKHKPKLYYLPVCWK-PPEGILTC 169

Query: 641  NTNGASSGNPGRGAYGFCVRNSAANLIYA*AEETGFASN--TETLTILEAIKWCTQNQLH 468
            NT+ AS  NP   +YGFC+RNS  +L+Y   +E    +N   E + I E +  C    + 
Sbjct: 170  NTDVASRCNPEISSYGFCLRNSVGDLVYVQGKEIQEGTNLEVEAVAIREDLAHCVTKGVM 229

Query: 467  LINIQTDSQLIKRIL 423
               ++TDSQ++ +IL
Sbjct: 230  KACLETDSQVLIKIL 244


>ref|XP_006338863.1| PREDICTED: uncharacterized protein LOC102579795 [Solanum tuberosum]
          Length = 778

 Score =  134 bits (337), Expect(2) = 3e-31
 Identities = 65/184 (35%), Positives = 99/184 (53%), Gaps = 2/184 (1%)
 Frame = -3

Query: 968 LQPQQIIVKWWTTSVSHRLKPIFQVMPAIIVWELWKRRNALKHGKQISIGRCIYHIFSTV 789
           LQ +  I KWW  + S +L+P+F  +P  I+WE WK RN +KHG +IS    +  I   +
Sbjct: 33  LQLKDTIFKWWNANCSAKLRPLFNAIPGFILWESWKGRNTVKHGGKISRYNMLAEITRNI 92

Query: 788 QRLVQFRNPSIRLIPHKWSEVIQLLEGYRPGIKVTKVIWKPPPQGWILCNTNGASSGNPG 609
             L   R P +R IP  WS +++  E Y   +    + W PP  G   CNT+ AS GNP 
Sbjct: 93  HNLAMVRYPWLRNIPKDWSMMVKFFENYISVLATKVIYWVPPNMGVYKCNTDCASKGNPR 152

Query: 608 RGAYGFCVRNSAANLIYA*AEETGFASN--TETLTILEAIKWCTQNQLHLINIQTDSQLI 435
             A GFC+RN     IY  ++E GF ++   E +     +++C  + L  + ++TDS ++
Sbjct: 153 PSAGGFCIRNWNGEFIYTTSQELGFKTSLEAEVIAFERGLQFCMSHNLLPVILETDSLIV 212

Query: 434 KRIL 423
            +IL
Sbjct: 213 SKIL 216



 Score = 28.9 bits (63), Expect(2) = 3e-31
 Identities = 9/31 (29%), Positives = 21/31 (67%)
 Frame = -2

Query: 414 WKPPWNIASCIEEIHELGKELRIRFTHILKE 322
           W+ PW+I+  I++I  L ++ ++  +H+ +E
Sbjct: 220 WETPWSISLLIKKIQWLRRDGQVEVSHVFRE 250


>ref|XP_006343440.1| PREDICTED: uncharacterized protein LOC102595406 [Solanum tuberosum]
          Length = 866

 Score =  110 bits (275), Expect(3) = 1e-27
 Identities = 54/138 (39%), Positives = 80/138 (57%), Gaps = 2/138 (1%)
 Frame = -3

Query: 830  ISIGRCIYHIFSTVQRLVQFRNPSIRLIPHKWSEVIQLLEGYRPGIKVTKVIWKPPPQGW 651
            ++  + +Y +   V +  +   PS++  P  WS++++ LE Y+P I   K+IW PP    
Sbjct: 682  MTYNKLVYQVTLNVWQFARSSFPSMKQFPTNWSDMVKFLENYKPRIYYKKIIWMPPNSNT 741

Query: 650  ILCNTNGASSGNPGRGAYGFCVRNSAANLIYA*AEETGFASN--TETLTILEAIKWCTQN 477
              CNT+GAS GNPG+ +Y +C+R+   NLIYA AEE    +N   E + I EAI  CT  
Sbjct: 742  RKCNTDGASKGNPGKSSYAYCLRDQEGNLIYAQAEEIPETTNVEAEAVAIKEAIYHCTTR 801

Query: 476  QLHLINIQTDSQLIKRIL 423
                + I+TDS L+K IL
Sbjct: 802  GFSRVTIETDSLLLKNIL 819



 Score = 34.7 bits (78), Expect(3) = 1e-27
 Identities = 16/45 (35%), Positives = 26/45 (57%)
 Frame = -2

Query: 972 KTTTAADHSEMVDNLCFT*T*TNFPSYACYNCMGTMEEEKCFETW 838
           +T      + MVD+   + T TN+ +YAC   +G ME++K  +TW
Sbjct: 635 RTKPKPSANNMVDSTGRSQTPTNYENYACNYTLGNMEKKKYHQTW 679



 Score = 25.8 bits (55), Expect(3) = 1e-27
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -2

Query: 414 WKPPWNIASCIEEIHELGKELRIRFTHILKE 322
           W+ PWNI   +E+   L +   +   HI +E
Sbjct: 823 WEIPWNIRIIVEDTLTLMQYSTVNIEHIYRE 853


>ref|XP_006355175.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 143

 Score = 97.4 bits (241), Expect(2) = 1e-20
 Identities = 43/107 (40%), Positives = 67/107 (62%), Gaps = 2/107 (1%)
 Frame = -3

Query: 728 VIQLLEGYRPGIKVTKVIWKPPPQGWILCNTNGASSGNPGRGAYGFCVRNSAANLIYA*A 549
           ++ LL+ Y+P +    V WKPP  GWI CNT+GAS GNP + +YGFC+RN    L+YA  
Sbjct: 1   MVALLQSYKPTLYYHVVNWKPPEIGWIKCNTDGASKGNPDQSSYGFCIRNHTGELLYAEV 60

Query: 548 EETGFASN--TETLTILEAIKWCTQNQLHLINIQTDSQLIKRILVES 414
           +  G  +N   E++ I +A+++C       ++++TDS  +K ILV +
Sbjct: 61  QSIGVTTNMDAESMAIWKALQYCLSQGFQQVSLETDSLTLKNILVRN 107



 Score = 30.4 bits (67), Expect(2) = 1e-20
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -2

Query: 414 WKPPWNIASCIEEIHELGKELRIRFTHILKE 322
           WK PW +   +E+I E+   + +   HI +E
Sbjct: 108 WKTPWELVERVEDILEIMSHMDVTIKHIFRE 138


>ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596481 [Solanum tuberosum]
          Length = 1135

 Score =  105 bits (263), Expect = 2e-20
 Identities = 65/195 (33%), Positives = 97/195 (49%), Gaps = 2/195 (1%)
 Frame = -3

Query: 1001 FSSFACINIERLQPQQIIVKWWTTSVSHRLKPIFQVMPAIIVWELWKRRNALKHGKQISI 822
            FS+FA I IE +  QQ+I+ WW  S + +LK + + MP II+W LWKRRN  KH    + 
Sbjct: 968  FSNFAGIQIESMHLQQLIINWWKHSDNAKLKVVMRAMPTIIMWTLWKRRNNFKHRGTTT- 1026

Query: 821  GRCIYHIFSTVQRLVQFRNPSIRLIPHKWSEVIQLLEGYRPGIKVTKVIWKPPPQGWILC 642
                                        +SEV+  ++  +PG    K            C
Sbjct: 1027 ----------------------------YSEVVMQVQEEKPGRNKVK------------C 1046

Query: 641  NTNGASSGNPGRGAYGFCVRNSAANLIYA*AEETGFASN--TETLTILEAIKWCTQNQLH 468
            NT+GA+ GN G  +  F VR+   +LIYA A+  G A+N   E L +LEA+ +C +  L 
Sbjct: 1047 NTDGAARGNSGASSTSFVVRDEEGDLIYARAKGIGIATNMEAEALALLEAVWYCQEKDLK 1106

Query: 467  LINIQTDSQLIKRIL 423
               I+TDS ++K+++
Sbjct: 1107 EPIIETDSLVLKKMV 1121


>ref|XP_004243166.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 316

 Score =  103 bits (257), Expect = 1e-19
 Identities = 64/206 (31%), Positives = 101/206 (49%), Gaps = 6/206 (2%)
 Frame = -3

Query: 1001 FSSFACINIERLQPQQIIVKWWT---TSVSHRLKPIFQVMPAIIVWELWKRRNALKHG-K 834
            FS+ A +  E+   Q  + +WW+   T+  H+L  + Q  P  + W LWK R A K+G K
Sbjct: 29   FSASAGLKEEQPSLQARLRQWWSATATNAGHQL--LLQATPTFVCWNLWKNRCACKYGGK 86

Query: 833  QISIGRCIYHIFSTVQRLVQFRNPSIRLIPHKWSEVIQLLEGYRPGIKVTKVIWKPPPQG 654
              +I R  Y I+    +++Q   P I+  P  W+ + Q  E  +  IKV KV W  PP+ 
Sbjct: 87   ATNISRVKYAIYKDTFKMLQNTFPHIKW-PSNWTALYQTSEKCKHDIKVCKVAWNRPPEE 145

Query: 653  WILCNTNGASSGNPGRGAYGFCVRNSAANLIYA*AEETGFASN--TETLTILEAIKWCTQ 480
            WI  NT+G++  NPG+   G  +R++   L+ A A   G  SN   E       + W   
Sbjct: 146  WIKINTDGSAINNPGKIGAGGILRDTEGRLVLAFATSLGEGSNNQAEMEAAQFGLSWAID 205

Query: 479  NQLHLINIQTDSQLIKRILVESGNHH 402
                 I ++ DSQ++ + + +   HH
Sbjct: 206  LDYRNIILEVDSQIVVQWITKKTTHH 231


>ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601483 [Solanum tuberosum]
          Length = 2019

 Score = 90.5 bits (223), Expect(2) = 1e-17
 Identities = 56/187 (29%), Positives = 91/187 (48%), Gaps = 4/187 (2%)
 Frame = -3

Query: 983  INIERLQPQQIIVKWWTTSVSHRL-KPIFQVMPAIIVWELWKRRNALKHG-KQISIGRCI 810
            I  + L  + +I++WW+   ++   K I    P  I W LWK R A+K+G KQ +I R  
Sbjct: 966  IRTDFLPLRNMIMRWWSAPHNNEAHKLILHSTPIFICWNLWKNRCAVKYGGKQSNIARVK 1025

Query: 809  YHIFSTVQRLVQFRNPSIRLIPHKWSEVIQLLEGYRPGIKVTKVIWKPPPQGWILCNTNG 630
            + +     +L+    P I   P +W++   ++E      KVT V W  PP  W+  NT+G
Sbjct: 1026 HLVILDNFKLLHTVFPYISW-PLRWNKFCNVIENCSQDTKVTAVQWTKPPYRWVKLNTDG 1084

Query: 629  ASSGNPGRGAYGFCVRNSAANLIYA*AEETGFASN--TETLTILEAIKWCTQNQLHLINI 456
            ++  NPG    G  +RN    +I A +   G  +N   E    +  I WC   + + + +
Sbjct: 1085 SALSNPGSIGAGDVIRNHLGEIILAYSTPLGTGTNNQAEVEAAIFGIAWCIHMKYNQVIL 1144

Query: 455  QTDSQLI 435
            + DSQL+
Sbjct: 1145 EVDSQLL 1151



 Score = 26.6 bits (57), Expect(2) = 1e-17
 Identities = 10/29 (34%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
 Frame = -2

Query: 405  PWNIASCIEEIHELGKEL-RIRFTHILKE 322
            PWNI+S ++++H+L  +L   +  H  +E
Sbjct: 1162 PWNISSQMQQLHQLATQLDHFKCIHTFRE 1190



 Score = 82.0 bits (201), Expect = 3e-13
 Identities = 48/121 (39%), Positives = 68/121 (56%), Gaps = 4/121 (3%)
 Frame = -3

Query: 956  QIIVKWWTT---SVSHRLKPIFQVMPAIIVWELWKRRNALKHG-KQISIGRCIYHIFSTV 789
            Q+I++WW+T   + ++RL  I Q  P  I W LWK R A K+G KQ +I R  Y I+   
Sbjct: 679  QLIMQWWSTKHNNAAYRL--ILQATPIFICWNLWKNRCASKYGGKQSNISRVKYAIYKDN 736

Query: 788  QRLVQFRNPSIRLIPHKWSEVIQLLEGYRPGIKVTKVIWKPPPQGWILCNTNGASSGNPG 609
             +L+    P I+  P  W E++QL E      KVT V W  P + W+  NT+G++  NPG
Sbjct: 737  YKLMTTTFPQIKW-PSNWMELLQLGERCTHDTKVTMVKWIKPKKQWVKINTDGSALCNPG 795

Query: 608  R 606
            R
Sbjct: 796  R 796


>ref|XP_004253520.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 468

 Score = 91.3 bits (225), Expect(2) = 2e-17
 Identities = 63/195 (32%), Positives = 93/195 (47%), Gaps = 6/195 (3%)
 Frame = -3

Query: 1001 FSSFACINIERLQPQQIIVKWWTT---SVSHRLKPIFQVMPAIIVWELWKRRNALKHG-K 834
            F++ A I  +      +I +WWTT   +  H+L  + Q  P  I W LWK R A K+G K
Sbjct: 181  FAATAGIQADHSTLPALIKQWWTTKPNNAGHKL--LLQATPIFICWNLWKNRCACKYGGK 238

Query: 833  QISIGRCIYHIFSTVQRLVQFRNPSIRLIPHKWSEVIQLLEGYRPGIKVTKVIWKPPPQG 654
              +I R  Y I+    ++++   PSI   P  W+ +I   E     IKV KV W  PP  
Sbjct: 239  GTNISRVKYAIYKDTFKMLKNSFPSINW-PANWTTLILTSEKCVHNIKVYKVTWFKPPDQ 297

Query: 653  WILCNTNGASSGNPGRGAYGFCVRNSAANLIYA*AEETGFASN--TETLTILEAIKWCTQ 480
            WI  NT+G++  N G+   G  +R+    +I A +   G  SN   E    L  + W  +
Sbjct: 298  WIKINTDGSALTNEGKIGAGGIIRDKEGKMIMAFSTPLGEGSNNQAEIEAALFGLTWAFE 357

Query: 479  NQLHLINIQTDSQLI 435
                 I ++ DSQL+
Sbjct: 358  LGFKNILLELDSQLV 372



 Score = 25.0 bits (53), Expect(2) = 2e-17
 Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = -2

Query: 408 PPWNIASCIEEIHELGKELR-IRFTHILKEPTNW 310
           PPWN+ + +E + ++  + +  R  HI +E  NW
Sbjct: 382 PPWNLTNQLERLQQIIIQTQNFRCCHIFRE-ANW 414


>ref|XP_004253405.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 375

 Score = 94.7 bits (234), Expect = 5e-17
 Identities = 60/195 (30%), Positives = 95/195 (48%), Gaps = 6/195 (3%)
 Frame = -3

Query: 1001 FSSFACINIERLQPQQIIVKWWTT---SVSHRLKPIFQVMPAIIVWELWKRRNALKHG-K 834
            F++ A +  ++   Q  + +WWT    + SH+L  + Q MP  IVW LWK R A K+G K
Sbjct: 113  FTTTAGLQEDQSSVQARLRQWWTARPRNASHQL--LLQAMPIFIVWNLWKNRCACKYGGK 170

Query: 833  QISIGRCIYHIFSTVQRLVQFRNPSIRLIPHKWSEVIQLLEGYRPGIKVTKVIWKPPPQG 654
              +I R  Y ++    ++++   P +   P  W+ +IQ  E  +  IKV    W  PP+ 
Sbjct: 171  STNISRVKYAVYKDTFKMLKIAFPRVNW-PGNWAALIQTAERCKHEIKVCMTTWNRPPEQ 229

Query: 653  WILCNTNGASSGNPGRGAYGFCVRNSAANLIYA*AEETGFASN--TETLTILEAIKWCTQ 480
            WI  NT+G++  N G    G  +R+    ++ A A   G  +N   E    L  + W  +
Sbjct: 230  WIKINTDGSALINTGHCGAGGIIRDKEGKMVLAFATPLGDGTNNKAEAEAALFGLSWALE 289

Query: 479  NQLHLINIQTDSQLI 435
                 I I+ DSQL+
Sbjct: 290  LGHRNILIELDSQLV 304


>ref|XP_004253259.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 668

 Score = 94.7 bits (234), Expect = 5e-17
 Identities = 62/195 (31%), Positives = 95/195 (48%), Gaps = 6/195 (3%)
 Frame = -3

Query: 1001 FSSFACINIERLQPQQIIVKWWTT---SVSHRLKPIFQVMPAIIVWELWKRRNALKHG-K 834
            F++ A +  ++   Q  + +WWT    + SH+L  + Q MP  IVW LWK R A K+G K
Sbjct: 384  FTTTAGLQEDQSSVQARLRQWWTARLRNASHQL--LLQAMPIFIVWNLWKNRCACKYGGK 441

Query: 833  QISIGRCIYHIFSTVQRLVQFRNPSIRLIPHKWSEVIQLLEGYRPGIKVTKVIWKPPPQG 654
              +I R  Y I+    ++++   P I   P  W+ +IQ  E  +  IKV    W  PP+ 
Sbjct: 442  STNISRVKYAIYKDTFKMLKSAFPCINW-PGNWAALIQTAERCKHEIKVCMTTWNRPPEQ 500

Query: 653  WILCNTNGASSGNPGRGAYGFCVRNSAANLIYA*AEETGFASN--TETLTILEAIKWCTQ 480
            WI  NT+G++  N G    G  +R+    ++ A A   G  +N   E    L  + W  +
Sbjct: 501  WIKINTDGSALINTGHCGAGGIIRDKEGKIVLAFATPLGDGTNNKAEAEAALFGLSWALE 560

Query: 479  NQLHLINIQTDSQLI 435
                 I I+ DSQL+
Sbjct: 561  LGHRNILIELDSQLV 575


>ref|XP_004239568.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 308

 Score = 94.7 bits (234), Expect = 5e-17
 Identities = 61/195 (31%), Positives = 95/195 (48%), Gaps = 6/195 (3%)
 Frame = -3

Query: 1001 FSSFACINIERLQPQQIIVKWWTT---SVSHRLKPIFQVMPAIIVWELWKRRNALKHG-K 834
            F++ A +  +    Q  + +WWT    +  H+L  + Q  P  I W LWK R A K+G K
Sbjct: 21   FAASAGLQADHSSLQARVQQWWTARPQNEGHQL--LLQATPTFICWNLWKNRCACKYGAK 78

Query: 833  QISIGRCIYHIFSTVQRLVQFRNPSIRLIPHKWSEVIQLLEGYRPGIKVTKVIWKPPPQG 654
              +I R  Y ++    ++++   P I+  P  W+ +IQ  E  +  IKV  V W  PP+ 
Sbjct: 79   ATNISRVKYAVYKDTFKMLKIAFPHIKW-PASWTALIQTSEKCKHEIKVCMVAWNRPPEQ 137

Query: 653  WILCNTNGASSGNPGRGAYGFCVRNSAANLIYA*AEETGFASN--TETLTILEAIKWCTQ 480
            WI  NT+G++  N G+   G  +R+    ++ A A   G  SN   ET   L  + W  +
Sbjct: 138  WIKINTDGSALTNLGQIGAGGILRDREGKMVLAFATPLGEGSNNKAETAAALFGLSWALE 197

Query: 479  NQLHLINIQTDSQLI 435
                 I I+ DSQL+
Sbjct: 198  LGYRNILIELDSQLV 212


>ref|XP_004253442.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 775

 Score = 94.0 bits (232), Expect = 8e-17
 Identities = 64/206 (31%), Positives = 100/206 (48%), Gaps = 6/206 (2%)
 Frame = -3

Query: 1001 FSSFACINIERLQPQQIIVKWWTT---SVSHRLKPIFQVMPAIIVWELWKRRNALKHG-K 834
            F++ A +  ++   Q  + +WWT    +  H+L  + Q  P  I W LWK R A K+G K
Sbjct: 488  FAAGAGLQQDQQTLQARLKQWWTAKSCNAGHQL--LLQATPIFICWNLWKNRCACKYGGK 545

Query: 833  QISIGRCIYHIFSTVQRLVQFRNPSIRLIPHKWSEVIQLLEGYRPGIKVTKVIWKPPPQG 654
              +I R  Y ++    ++++   P I+   H W+ +I   E  +   KV +V+W  PP+ 
Sbjct: 546  ATNISRVKYAVYKDNFKMMKNAFPHIQWPAH-WTALIHTSEKCKHDTKVCQVVWNRPPEE 604

Query: 653  WILCNTNGASSGNPGRGAYGFCVRNSAANLIYA*AEETGFASNTETLTILEAIKWCTQNQ 474
            WI  NT+G++  NPG    G  +RN    L+ A A   G  SN +  T    I      +
Sbjct: 605  WIKINTDGSALTNPGNIGAGGIIRNKEGKLVMAFATSLGEGSNNKAETEAALIGLVHALE 664

Query: 473  LHLINI--QTDSQLIKRILVESGNHH 402
            L   NI  + DSQLI + + +   HH
Sbjct: 665  LGYRNIIMELDSQLIVQWISKKSVHH 690


>ref|XP_004228797.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 389

 Score = 94.0 bits (232), Expect = 8e-17
 Identities = 57/178 (32%), Positives = 92/178 (51%), Gaps = 3/178 (1%)
 Frame = -3

Query: 932 TSVSHRLKPIFQVMPAIIVWELWKRRNALKHG-KQISIGRCIYHIFSTVQRLVQFRNPSI 756
           TS +   K I  ++P II W LWK R + K+G K  SI R    IF  + ++++   P+I
Sbjct: 126 TSYNEVHKLILHILPNIICWNLWKNRCSAKYGNKPSSIYRVESGIFKDIMQIIKAVYPNI 185

Query: 755 RLIPHKWSEVIQLLEGYRPGIKVTKVIWKPPPQGWILCNTNGASSGNPGRGAYGFCVRNS 576
                 W  +  L+E  +  +KVT V W+ PP+G    NT+G++  N G+   G  +R+ 
Sbjct: 186 PW-QSSWERLFNLVEQCQQHLKVTMVNWERPPEGIHKLNTDGSAKHNTGKIGGGGILRDH 244

Query: 575 AANLIYA*AEETGFASN--TETLTILEAIKWCTQNQLHLINIQTDSQLIKRILVESGN 408
              LIYA A   GF +N   E    L  ++WC Q+    I ++ DS+L+ + ++   +
Sbjct: 245 QGKLIYAFAIPLGFGTNNFAEIQAALHGLQWCQQHGFEKIILEVDSELLHKWIINKSS 302


>ref|XP_004253498.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 308

 Score = 92.4 bits (228), Expect = 2e-16
 Identities = 66/206 (32%), Positives = 98/206 (47%), Gaps = 6/206 (2%)
 Frame = -3

Query: 1001 FSSFACINIERLQPQQIIVKWWTTSV---SHRLKPIFQVMPAIIVWELWKRRNALKHG-K 834
            F++ A +  ++   Q  + KWWT +     H+L  + Q  P  I W LWK R A K+G K
Sbjct: 21   FAASAGLQHDQTTLQARLEKWWTANPRNEGHQL--LLQATPIFICWNLWKNRCASKYGGK 78

Query: 833  QISIGRCIYHIFSTVQRLVQFRNPSIRLIPHKWSEVIQLLEGYRPGIKVTKVIWKPPPQG 654
               I R  Y I+    ++++   P I    H W+ +I   E  +  IKV KV W  PP+ 
Sbjct: 79   ATYISRVKYAIYKDNFKMMKNAFPHINWPAH-WTALITTSERCKHEIKVCKVTWNRPPEE 137

Query: 653  WILCNTNGASSGNPGRGAYGFCVRNSAANLIYA*AEETGFASN--TETLTILEAIKWCTQ 480
            WI  NT+G++  NPG+   G  +R+    LI A A   G  SN   ET   L  +    +
Sbjct: 138  WIKINTDGSALTNPGKIGAGGIIRDKDGKLILAFATSLGEGSNNKAETEAALFGLVKALE 197

Query: 479  NQLHLINIQTDSQLIKRILVESGNHH 402
                 I ++ DSQL+   + +   HH
Sbjct: 198  LGFKNIIMELDSQLVVHWINKKSAHH 223


>ref|XP_004244918.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 1010

 Score = 92.0 bits (227), Expect = 3e-16
 Identities = 60/188 (31%), Positives = 95/188 (50%), Gaps = 4/188 (2%)
 Frame = -3

Query: 959  QQIIVKWWTTSVSHRL-KPIFQVMPAIIVWELWKRRNALKHG-KQISIGRCIYHIFSTVQ 786
            + +++ W    V +++ K ++Q++P  I W LWK R A+KHG KQ S  R  Y IF    
Sbjct: 737  RSLLLHWRNIPVHNQVQKLLYQILPNFICWNLWKNRCAVKHGSKQCSTQRVQYAIFKDTM 796

Query: 785  RLVQFRNPSIRLIPHKWSEVIQLLEGYRPGIKVTKVIWKPPPQGWILCNTNGASSGNPGR 606
            + V    P+I    +    +I L E  +  +KVTKV+W+ P  G    NT+G++  N  +
Sbjct: 797  QAVMVAFPNISR-QNNLDMLINLAENCQQQVKVTKVMWEKPSLGIFKLNTDGSAIHNINK 855

Query: 605  GAYGFCVRNSAANLIYA*AEETGFASN--TETLTILEAIKWCTQNQLHLINIQTDSQLIK 432
               G  +R+    LIYA A   G  +N   E    L  + WC Q+    I ++ DS+L+ 
Sbjct: 856  IGGGGILRDHNGKLIYAFAIPFGIGTNNFAEMKAALYGLSWCEQHGYKRIILEVDSELLS 915

Query: 431  RILVESGN 408
            + +  S N
Sbjct: 916  KWIDNSIN 923


>ref|XP_004253443.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 775

 Score = 91.3 bits (225), Expect = 5e-16
 Identities = 62/206 (30%), Positives = 100/206 (48%), Gaps = 6/206 (2%)
 Frame = -3

Query: 1001 FSSFACINIERLQPQQIIVKWWTT---SVSHRLKPIFQVMPAIIVWELWKRRNALKHG-K 834
            F++ A +  ++   Q  + +WWT    +  H+L  + Q  P  I W LWK R A K+G K
Sbjct: 488  FAAGAGLQEDQQTLQARLKQWWTAKSCNAGHQL--LLQATPIFICWNLWKNRCACKYGGK 545

Query: 833  QISIGRCIYHIFSTVQRLVQFRNPSIRLIPHKWSEVIQLLEGYRPGIKVTKVIWKPPPQG 654
              +I R  Y ++    ++++   P I+   H W+ +I   E  +   KV +V+W  PP+ 
Sbjct: 546  ATNISRVKYVVYKDNFKMMKNAFPHIQWPAH-WTALIHTSEKCKHDTKVCQVVWNRPPEE 604

Query: 653  WILCNTNGASSGNPGRGAYGFCVRNSAANLIYA*AEETGFASNTETLTILEAIKWCTQNQ 474
            WI  NT+G++  NPG+   G  +RN    L+ A A   G  +  +  T    I      +
Sbjct: 605  WIKINTDGSALTNPGKIGAGGIIRNKEGKLVMAFATSLGEGTKNKAKTEAALIGLVHALE 664

Query: 473  LHLINI--QTDSQLIKRILVESGNHH 402
            L   NI  + DSQLI + + +   HH
Sbjct: 665  LGYRNIIMELDSQLIVQWISKKSVHH 690


>ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261371 [Solanum
            lycopersicum]
          Length = 1246

 Score = 90.9 bits (224), Expect = 7e-16
 Identities = 53/176 (30%), Positives = 92/176 (52%), Gaps = 4/176 (2%)
 Frame = -3

Query: 950  IVKWWTTSVSHRL-KPIFQVMPAIIVWELWKRRNALKHG-KQISIGRCIYHIFSTVQRLV 777
            ++ W    V++ + K +  ++P +I W LWK R A+K+G K  SI R  Y IF  V +++
Sbjct: 991  LLHWRNQQVNNEVHKLLIHILPNVICWNLWKNRCAVKYGNKSSSIHRVQYGIFKDVMQVI 1050

Query: 776  QFRNPSIRLIPHKWSEVIQLLEGYRPGIKVTKVIWKPPPQGWILCNTNGASSGNPGRGAY 597
            +   PSI      W+++I ++E  +   K+  V W  P  G    NT+G++  N G+   
Sbjct: 1051 KIVFPSIPW-QSSWNKLINIVEHCKQQYKIVLVSWNKPGLGTYKLNTDGSALQNSGKIGG 1109

Query: 596  GFCVRNSAANLIYA*AEETGFASN--TETLTILEAIKWCTQNQLHLINIQTDSQLI 435
            G  +R+    ++YA +   GF +N   E    L  ++WC Q+    + ++ DSQL+
Sbjct: 1110 GGILRDHQGKIVYAFSLPFGFGTNNIAEIKAALYGLEWCDQHGYKRVELEVDSQLL 1165


>ref|XP_004253445.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 338

 Score = 90.1 bits (222), Expect = 1e-15
 Identities = 56/195 (28%), Positives = 95/195 (48%), Gaps = 6/195 (3%)
 Frame = -3

Query: 1001 FSSFACINIERLQPQQIIVKWWTT---SVSHRLKPIFQVMPAIIVWELWKRRNALKHG-K 834
            F++ A +  +R   Q  + +WWT    +  H+L  + Q  P  IVW LWK   A K+G  
Sbjct: 51   FTAGAGLQADRTPLQAKLRQWWTARPRNEGHQL--LLQATPVFIVWNLWKNICACKYGGT 108

Query: 833  QISIGRCIYHIFSTVQRLVQFRNPSIRLIPHKWSEVIQLLEGYRPGIKVTKVIWKPPPQG 654
              +I R  Y ++    ++++   P I   P  W+ ++Q  E  +  I+V+ V W  P + 
Sbjct: 109  STNISRVKYAVYKDTFKMLKMAFPHINW-PGSWAALVQKAENCKHEIQVSMVTWNRPSEQ 167

Query: 653  WILCNTNGASSGNPGRGAYGFCVRNSAANLIYA*AEETGFASN--TETLTILEAIKWCTQ 480
            WI  NT+G++  NPG+   G  +R+    ++ A A   G  +N   E   +L  + W  +
Sbjct: 168  WIKINTDGSALTNPGQTGAGGILRDKEGKMVMAFATPLGEGTNNTAEAEAVLFGLSWALE 227

Query: 479  NQLHLINIQTDSQLI 435
                 I I+ D+QL+
Sbjct: 228  LGHRNIQIELDAQLV 242