BLASTX nr result

ID: Atropa21_contig00010973 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00010973
         (558 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006345248.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] ...   124   2e-26
ref|XP_004251704.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] ...    98   1e-18
gb|AAB37270.1| beta-ketoacyl-ACP synthase II [Cuphea wrightii]         60   5e-07
ref|XP_006353782.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] ...    56   7e-06

>ref|XP_006345248.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase II,
           chloroplastic-like [Solanum tuberosum]
          Length = 532

 Score =  124 bits (311), Expect = 2e-26
 Identities = 72/127 (56%), Positives = 83/127 (65%), Gaps = 15/127 (11%)
 Frame = +3

Query: 222 MSSSTVSSWVMAACMSSACENVQEKNCFGISMHKYKVGARNKKKMRCV------------ 365
           MSSS VS   + ACMS+ CEN  +K+ FG S +  KVG  NKKKMRCV            
Sbjct: 1   MSSSMVS---VVACMSAVCENGAKKDFFGFSKYNCKVGVGNKKKMRCVLAKFQYSKTCNG 57

Query: 366 -SFSNSCLVNYGFSSLYGLRSGYPSCWRSKNSGSGKQGGIRAIAVQPEM--EVASKKKPQ 536
            SF NSCLV+ GF S+ G RSG+P CW+SK SGS +QGGIRA AV P M  E  SKKKP 
Sbjct: 58  LSFCNSCLVSNGFCSVDGWRSGHPGCWKSKFSGSAQQGGIRATAVPPVMEGEGTSKKKPP 117

Query: 537 TKERRVV 557
           TK+RRVV
Sbjct: 118 TKKRRVV 124


>ref|XP_004251704.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase II,
           chloroplastic-like [Solanum lycopersicum]
          Length = 526

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 61/122 (50%), Positives = 72/122 (59%), Gaps = 13/122 (10%)
 Frame = +3

Query: 222 MSSSTVSSWVMAACMSSACENVQEKNCFGISMHKYKVGARNKKKMRCV------------ 365
           MSSS VS   + ACMS+ CEN  +K+ FG   +  KVG  NKKKM CV            
Sbjct: 1   MSSSMVS---VVACMSAVCENGAKKDFFGFFKYNCKVGVGNKKKMSCVLAKFQYSKTCNG 57

Query: 366 -SFSNSCLVNYGFSSLYGLRSGYPSCWRSKNSGSGKQGGIRAIAVQPEMEVASKKKPQTK 542
            SFSNSC+V+ GF S+ G RSG         SGS +QGG+RA AV P +E  SKKKP TK
Sbjct: 58  ISFSNSCVVSNGFCSVDGWRSG-------TYSGSARQGGVRATAVPPVIEGTSKKKPPTK 110

Query: 543 ER 548
           ER
Sbjct: 111 ER 112


>gb|AAB37270.1| beta-ketoacyl-ACP synthase II [Cuphea wrightii]
          Length = 517

 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 41/114 (35%), Positives = 60/114 (52%), Gaps = 4/114 (3%)
 Frame = +3

Query: 228 SSTVSSWVMAACMSSACENVQEKNCFGISMHKYKVGARNKKKMRCVSFSNS---CLV-NY 395
           SS   +W++AACMS++ +N        +S  + ++  R +      S   S   CL  N 
Sbjct: 5   SSPFCTWLVAACMSTSFDNDPRS----LSNKRVRLSRRRRTLSSHCSLRGSTFQCLGDNV 60

Query: 396 GFSSLYGLRSGYPSCWRSKNSGSGKQGGIRAIAVQPEMEVASKKKPQTKERRVV 557
           GF SL+G   G+    R+  SG        A+A+QP  EV++KKKP TK+RRVV
Sbjct: 61  GFDSLFGSNHGHRRLGRASRSGEAM-----AVAMQPAPEVSTKKKPVTKQRRVV 109


>ref|XP_006353782.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase II,
           chloroplastic-like [Solanum tuberosum]
          Length = 540

 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 50/133 (37%), Positives = 69/133 (51%), Gaps = 21/133 (15%)
 Frame = +3

Query: 222 MSSSTVSSWVMAACMSSACENVQEKN-CFGI--SMHKYKVGARNKKKMRCVSFSNSCL-- 386
           M+SSTVSSW++ +CMS   E   E +  FGI  S  K+ + ++  K +   S SN+ L  
Sbjct: 1   MASSTVSSWMIGSCMSVPGEKEHELHGFFGIYKSKCKWAIPSKTTKGVFINSKSNNPLTF 60

Query: 387 -VNYGFSS-----LYGLRSGYPSCWR----------SKNSGSGKQGGIRAIAVQPEMEVA 518
            ++  F S     + G  S   SC+           +K+  S + G + AIA Q  ME A
Sbjct: 61  PISSSFLSQPNRTITGFSSSN-SCFLFTGSAVTRPPTKSISSAQTGEVMAIASQSAMEAA 119

Query: 519 SKKKPQTKERRVV 557
            KKKP TKERRVV
Sbjct: 120 PKKKPPTKERRVV 132


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