BLASTX nr result
ID: Atropa21_contig00010932
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00010932
(836 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAT40504.2| Polyprotein, putative [Solanum demissum] 108 2e-21
ref|XP_006361364.1| PREDICTED: uncharacterized protein LOC102596... 108 3e-21
gb|AAT38756.2| Putative methyltransferase family protein [Solanu... 104 3e-20
ref|WP_009187176.1| hypothetical protein [Cecembia lonarensis] g... 85 4e-14
ref|WP_008409321.1| hypothetical protein [Bacillus isronensis] g... 81 5e-13
gb|AEJ72569.1| putative reverse transcriptase family member [Mal... 81 5e-13
emb|CCH50976.1| T4.15 [Malus x robusta] 79 2e-12
emb|CBL94165.1| putative reverse transcriptase family member [Ma... 77 6e-12
gb|EXC04356.1| DNA-directed RNA polymerase I subunit rpa1 [Morus... 76 1e-11
emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr... 72 3e-10
gb|EMT31111.1| Nucleoporin GLE1 [Aegilops tauschii] 68 4e-09
gb|AAT40495.2| Polyprotein, putative [Solanum demissum] 68 4e-09
gb|EMS49379.1| Retrovirus-related Pol polyprotein LINE-1 [Tritic... 67 6e-09
gb|EMS62958.1| Putative SWI/SNF-related matrix-associated actin-... 66 1e-08
gb|EMS50104.1| Retrovirus-related Pol polyprotein LINE-1 [Tritic... 66 1e-08
gb|EMT18677.1| Elongation factor Ts [Aegilops tauschii] 65 2e-08
gb|EMT16132.1| hypothetical protein F775_03544 [Aegilops tauschii] 65 2e-08
gb|AAT40500.1| Putative reverse transcriptase, identical [Solanu... 65 3e-08
gb|EXB91952.1| hypothetical protein L484_001826 [Morus notabilis] 65 4e-08
gb|EMS59381.1| Phospholipid-transporting ATPase 2 [Triticum urartu] 64 5e-08
>gb|AAT40504.2| Polyprotein, putative [Solanum demissum]
Length = 868
Score = 108 bits (270), Expect = 2e-21
Identities = 55/100 (55%), Positives = 66/100 (66%)
Frame = +1
Query: 19 CGHTXXXXXXXXXXXXXVGVALVEDKMREARLRWFRHVQKRDTYAPVRRCERLTMDGFMR 198
CGHT VGVA V DK+REARLRWF HV++R APVRRCE + ++G R
Sbjct: 591 CGHTRSDKIRNEVIREKVGVASVVDKLREARLRWFGHVKRRSADAPVRRCEVMVVEGTRR 650
Query: 199 DRGRPKTYWREVIRQDVV*VQLTEYITLDRGL*RTRIMVE 318
RGRPK YW EVIRQD+ + +TE +TLDR R+RI VE
Sbjct: 651 GRGRPKKYWEEVIRQDLAMLHITEDMTLDRKEWRSRIKVE 690
>ref|XP_006361364.1| PREDICTED: uncharacterized protein LOC102596609 [Solanum tuberosum]
Length = 278
Score = 108 bits (269), Expect = 3e-21
Identities = 56/101 (55%), Positives = 66/101 (65%)
Frame = +1
Query: 19 CGHTXXXXXXXXXXXXXVGVALVEDKMREARLRWFRHVQKRDTYAPVRRCERLTMDGFMR 198
CGHT VGVA V DK+REARLRWF HV++R APVRRCE L ++G R
Sbjct: 178 CGHTRSDKIRNEVIREKVGVASVVDKLREARLRWFGHVRRRCADAPVRRCEGLVVEGTRR 237
Query: 199 DRGRPKTYWREVIRQDVV*VQLTEYITLDRGL*RTRIMVEG 321
RGRPK YW EVIRQD+ + +TE +TLDR R+RI V G
Sbjct: 238 GRGRPKKYWGEVIRQDLAQLHITEDMTLDRKAWRSRIKVVG 278
>gb|AAT38756.2| Putative methyltransferase family protein [Solanum demissum]
Length = 828
Score = 104 bits (260), Expect = 3e-20
Identities = 60/150 (40%), Positives = 82/150 (54%)
Frame = +1
Query: 19 CGHTXXXXXXXXXXXXXVGVALVEDKMREARLRWFRHVQKRDTYAPVRRCERLTMDGFMR 198
CGHT VGVA V DK+REARLRWF HV++R A VRRCE + ++G R
Sbjct: 8 CGHTRSDKIRNEVIREKVGVASVVDKLREARLRWFGHVKRRSADAAVRRCEVMVVEGTRR 67
Query: 199 DRGRPKTYWREVIRQDVV*VQLTEYITLDRGL*RTRIMVEG**VVERSPTYAYTTGS*A* 378
RGRPK YW EVIRQD+ + +TE +TLDR R+RI + V + P Y + + A
Sbjct: 68 GRGRPKKYWEEVIRQDLAMLHITEDMTLDRKEWRSRIKLR---VSRKQPLYLHEVVARAA 124
Query: 379 SYLRLHTGXXXXXSVALLSLSY*CAQYYFI 468
+ SV++ ++ C +Y +
Sbjct: 125 MAAKNSGDNRTRTSVSIFIIAGLCCFFYLL 154
>ref|WP_009187176.1| hypothetical protein [Cecembia lonarensis]
gi|405551390|gb|EKB47241.1| hypothetical protein
B879_04163 [Cecembia lonarensis LW9]
Length = 133
Score = 84.7 bits (208), Expect = 4e-14
Identities = 47/99 (47%), Positives = 58/99 (58%)
Frame = +1
Query: 19 CGHTXXXXXXXXXXXXXVGVALVEDKMREARLRWFRHVQKRDTYAPVRRCERLTMDGFMR 198
CGHT VGVA +E KMRE RLRWF HVQ+R T APVRRC+ T R
Sbjct: 30 CGHTRKDKIRNEDIQGKVGVAEIEGKMRENRLRWFGHVQRRPTDAPVRRCDYGTEVRGRR 89
Query: 199 DRGRPKTYWREVIRQDVV*VQLTEYITLDRGL*RTRIMV 315
RGRP+ E +R+D+ + LTE +T DR R+RI +
Sbjct: 90 GRGRPRKTLEETLRKDLEYLDLTEDMTQDRAQWRSRIHI 128
>ref|WP_008409321.1| hypothetical protein [Bacillus isronensis]
gi|405383715|gb|EKB43273.1| hypothetical protein
B857_03969 [Bacillus isronensis B3W22]
Length = 109
Score = 80.9 bits (198), Expect = 5e-13
Identities = 44/99 (44%), Positives = 57/99 (57%)
Frame = +1
Query: 19 CGHTXXXXXXXXXXXXXVGVALVEDKMREARLRWFRHVQKRDTYAPVRRCERLTMDGFMR 198
CGHT VGVA +E KMRE RLRWF HVQ+ T AP+RRC+ T R
Sbjct: 6 CGHTRKDKIRNEDIRGKVGVAEIEGKMRENRLRWFGHVQRMPTDAPIRRCDYGTEVQGRR 65
Query: 199 DRGRPKTYWREVIRQDVV*VQLTEYITLDRGL*RTRIMV 315
RGRP+ E +R+D+ + LTE +T DR R++I +
Sbjct: 66 GRGRPRKTLEETLRKDLEYLDLTEDMTQDRAQWRSKIHI 104
>gb|AEJ72569.1| putative reverse transcriptase family member [Malus domestica]
Length = 212
Score = 80.9 bits (198), Expect = 5e-13
Identities = 42/90 (46%), Positives = 53/90 (58%)
Frame = +1
Query: 19 CGHTXXXXXXXXXXXXXVGVALVEDKMREARLRWFRHVQKRDTYAPVRRCERLTMDGFMR 198
CGHT VGVA +E MRE RLRWF HVQ+R TYAP+RRC+ T R
Sbjct: 109 CGHTRKDKIRNEDIRGKVGVAEIEGNMRENRLRWFGHVQRRPTYAPIRRCDYETEVQGRR 168
Query: 199 DRGRPKTYWREVIRQDVV*VQLTEYITLDR 288
RGRP+ E +R+D+ + LT+ +T DR
Sbjct: 169 GRGRPRKTLEETLRKDLGYLDLTKDMTQDR 198
>emb|CCH50976.1| T4.15 [Malus x robusta]
Length = 986
Score = 79.0 bits (193), Expect = 2e-12
Identities = 42/99 (42%), Positives = 58/99 (58%)
Frame = +1
Query: 19 CGHTXXXXXXXXXXXXXVGVALVEDKMREARLRWFRHVQKRDTYAPVRRCERLTMDGFMR 198
CGHT VGVA ++ KMRE +LRWF HVQ+R T AP+RRC+ T R
Sbjct: 883 CGHTRKDKIRNEDIRGKVGVAEIQGKMRENQLRWFGHVQRRPTDAPIRRCDYGTEVQGRR 942
Query: 199 DRGRPKTYWREVIRQDVV*VQLTEYITLDRGL*RTRIMV 315
RGRP+ E +R+D+ + LT+ +T DR R++I +
Sbjct: 943 GRGRPRKTLEETLRKDLEYLDLTKDMTQDRAQWRSKIHI 981
>emb|CBL94165.1| putative reverse transcriptase family member [Malus domestica]
Length = 163
Score = 77.4 bits (189), Expect = 6e-12
Identities = 45/99 (45%), Positives = 55/99 (55%)
Frame = +1
Query: 19 CGHTXXXXXXXXXXXXXVGVALVEDKMREARLRWFRHVQKRDTYAPVRRCERLTMDGFMR 198
C HT VGVA VE KMRE RLRWF HVQ+ T APVRRC T R
Sbjct: 61 CRHTRKDKIVNEDIRGKVGVAEVEGKMRENRLRWFGHVQRMPTDAPVRRCNYETEVRGRR 120
Query: 199 DRGRPKTYWREVIRQDVV*VQLTEYITLDRGL*RTRIMV 315
RGRP+ E +R+D+ + LTE +T +R R+RI +
Sbjct: 121 GRGRPRKTLEETLRKDLEYLDLTEDMTQNRAQWRSRIHI 159
>gb|EXC04356.1| DNA-directed RNA polymerase I subunit rpa1 [Morus notabilis]
Length = 1770
Score = 76.3 bits (186), Expect = 1e-11
Identities = 38/91 (41%), Positives = 53/91 (58%)
Frame = +1
Query: 22 GHTXXXXXXXXXXXXXVGVALVEDKMREARLRWFRHVQKRDTYAPVRRCERLTMDGFMRD 201
GHT VGVA +EDK+RE RLRW+ HVQ+R APVR E + + R
Sbjct: 1216 GHTRMDRIRNEVIRSKVGVAPIEDKVREGRLRWYGHVQRRPLEAPVRAWEDILIPNTRRG 1275
Query: 202 RGRPKTYWREVIRQDVV*VQLTEYITLDRGL 294
RGRP+ W EV+R+D++ + L E + +R +
Sbjct: 1276 RGRPRITWTEVVRKDILDLGLQESLISNRAV 1306
>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
domestica]
Length = 622
Score = 71.6 bits (174), Expect = 3e-10
Identities = 39/82 (47%), Positives = 52/82 (63%)
Frame = +1
Query: 70 VGVALVEDKMREARLRWFRHVQKRDTYAPVRRCERLTMDGFMRDRGRPKTYWREVIRQDV 249
VGVA +E KMRE LRWF HVQ+R T AP+RRC+ T + RGRP+ E +R+D+
Sbjct: 536 VGVAEIEGKMRENWLRWFGHVQRRPTDAPIRRCDYGTKVQGRKGRGRPRKTLEETLRKDL 595
Query: 250 V*VQLTEYITLDRGL*RTRIMV 315
+ L E +T DR R++I V
Sbjct: 596 EYLDLMEDMTQDRAQWRSKIHV 617
>gb|EMT31111.1| Nucleoporin GLE1 [Aegilops tauschii]
Length = 926
Score = 68.2 bits (165), Expect = 4e-09
Identities = 34/94 (36%), Positives = 49/94 (52%)
Frame = +1
Query: 13 DGCGHTXXXXXXXXXXXXXVGVALVEDKMREARLRWFRHVQKRDTYAPVRRCERLTMDGF 192
+ GHT VGVA +E+K+ + RLRWF H+Q R + APV D
Sbjct: 545 EASGHTRKDRVRNDDIRDRVGVAPIEEKLVQHRLRWFGHIQLRPSEAPVHSGRLKHADNV 604
Query: 193 MRDRGRPKTYWREVIRQDVV*VQLTEYITLDRGL 294
R RGRP W E +R+D+ +T+ + +DRG+
Sbjct: 605 KRGRGRPNLTWEESVRRDLKDWSITKVLAMDRGI 638
>gb|AAT40495.2| Polyprotein, putative [Solanum demissum]
Length = 115
Score = 68.2 bits (165), Expect = 4e-09
Identities = 33/54 (61%), Positives = 37/54 (68%)
Frame = +1
Query: 70 VGVALVEDKMREARLRWFRHVQKRDTYAPVRRCERLTMDGFMRDRGRPKTYWRE 231
VG A + DK R+ARLRWF HV +R T APVRRCERL + G R GR K YW E
Sbjct: 61 VGDASIVDKTRKARLRWFGHVMRRSTEAPVRRCERLDVVGKRRGSGRLKNYWGE 114
>gb|EMS49379.1| Retrovirus-related Pol polyprotein LINE-1 [Triticum urartu]
Length = 882
Score = 67.4 bits (163), Expect = 6e-09
Identities = 33/91 (36%), Positives = 47/91 (51%)
Frame = +1
Query: 19 CGHTXXXXXXXXXXXXXVGVALVEDKMREARLRWFRHVQKRDTYAPVRRCERLTMDGFMR 198
CGHT VGVA +E+K+ + RLRWF H+Q R APV + R
Sbjct: 414 CGHTRKDRVRNDDIRDRVGVAPIEEKLVQHRLRWFGHIQHRPPEAPVHSGRLKRAENVKR 473
Query: 199 DRGRPKTYWREVIRQDVV*VQLTEYITLDRG 291
RGRP W E +++D+ +T+ + +DRG
Sbjct: 474 GRGRPNLTWEESVKRDLKDWSITKELAMDRG 504
>gb|EMS62958.1| Putative SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 3-like 1
[Triticum urartu]
Length = 1028
Score = 66.2 bits (160), Expect = 1e-08
Identities = 32/90 (35%), Positives = 47/90 (52%)
Frame = +1
Query: 19 CGHTXXXXXXXXXXXXXVGVALVEDKMREARLRWFRHVQKRDTYAPVRRCERLTMDGFMR 198
CGHT VGVA +E+K+ + RLRWF H+Q+R APV + R
Sbjct: 666 CGHTRKDRVRNDDIRDRVGVAPIEEKLVQHRLRWFGHIQRRPPEAPVHSGRLKRAENVKR 725
Query: 199 DRGRPKTYWREVIRQDVV*VQLTEYITLDR 288
RGRP W E +++D+ +T+ + +DR
Sbjct: 726 GRGRPNLTWEESVKRDLKDWSITKELAMDR 755
>gb|EMS50104.1| Retrovirus-related Pol polyprotein LINE-1 [Triticum urartu]
Length = 3154
Score = 66.2 bits (160), Expect = 1e-08
Identities = 32/90 (35%), Positives = 47/90 (52%)
Frame = +1
Query: 19 CGHTXXXXXXXXXXXXXVGVALVEDKMREARLRWFRHVQKRDTYAPVRRCERLTMDGFMR 198
CGHT VGVA +E+K+ + RLRWF H+Q+R APV + R
Sbjct: 2380 CGHTRKDRVRNDDIRDRVGVAPIEEKLVQHRLRWFGHIQRRPPEAPVHSGRLKRAENVKR 2439
Query: 199 DRGRPKTYWREVIRQDVV*VQLTEYITLDR 288
RGRP W E +++D+ +T+ + +DR
Sbjct: 2440 GRGRPNLTWEESVKRDLKDWSITKELAMDR 2469
>gb|EMT18677.1| Elongation factor Ts [Aegilops tauschii]
Length = 750
Score = 65.5 bits (158), Expect = 2e-08
Identities = 37/96 (38%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Frame = +1
Query: 19 CGHTXXXXXXXXXXXXXVGVALVEDKMREARLRWFRHVQKRDTYAPVRRCERLTMDGFMR 198
CGHT VGVAL E+K+ + RLRWF H+Q R APV D R
Sbjct: 424 CGHTRKDRVRNDDIRDRVGVALNEEKLVQHRLRWFGHIQCRSPEAPVHSGWLKRADNVKR 483
Query: 199 DRGRPKTYWREVIRQDVV*VQLTEYITLDR-GL*RT 303
RGRP W E +++D+ +T + +DR G+ RT
Sbjct: 484 GRGRPNLTWEESVKKDLKDWSITRELAMDRAGVHRT 519
>gb|EMT16132.1| hypothetical protein F775_03544 [Aegilops tauschii]
Length = 1062
Score = 65.5 bits (158), Expect = 2e-08
Identities = 33/91 (36%), Positives = 47/91 (51%)
Frame = +1
Query: 19 CGHTXXXXXXXXXXXXXVGVALVEDKMREARLRWFRHVQKRDTYAPVRRCERLTMDGFMR 198
CGHT VGVA +E+K+ + RLRWF H+Q+R APV + R
Sbjct: 269 CGHTRKDRVWDDDIRDRVGVAPIEEKLVQYRLRWFGHIQRRPPEAPVHSGRLKCVGNVKR 328
Query: 199 DRGRPKTYWREVIRQDVV*VQLTEYITLDRG 291
RGRP W E ++D+ +T+ + +DRG
Sbjct: 329 GRGRPNLTWEESGKRDLKDWNITKELAMDRG 359
>gb|AAT40500.1| Putative reverse transcriptase, identical [Solanum demissum]
Length = 213
Score = 65.1 bits (157), Expect = 3e-08
Identities = 32/66 (48%), Positives = 39/66 (59%)
Frame = +1
Query: 19 CGHTXXXXXXXXXXXXXVGVALVEDKMREARLRWFRHVQKRDTYAPVRRCERLTMDGFMR 198
CGHT VGVA V DK+REARLRWF HV++R APVRRCE + ++ +
Sbjct: 123 CGHTRSDKIRNEVIREKVGVASVVDKLREARLRWFGHVKRRSADAPVRRCEVMVVEASLP 182
Query: 199 DRGRPK 216
RG K
Sbjct: 183 PRGSGK 188
>gb|EXB91952.1| hypothetical protein L484_001826 [Morus notabilis]
Length = 783
Score = 64.7 bits (156), Expect = 4e-08
Identities = 33/72 (45%), Positives = 40/72 (55%)
Frame = +1
Query: 22 GHTXXXXXXXXXXXXXVGVALVEDKMREARLRWFRHVQKRDTYAPVRRCERLTMDGFMRD 201
GHT VGVA +EDK+RE RLRW+ HVQ+R A VR E + + MR
Sbjct: 9 GHTRMDRIRNEVIRSKVGVAPIEDKVREGRLRWYGHVQRRPLEAQVRAWEDILIPNTMRG 68
Query: 202 RGRPKTYWREVI 237
RGRP+ W E I
Sbjct: 69 RGRPRITWTEEI 80
>gb|EMS59381.1| Phospholipid-transporting ATPase 2 [Triticum urartu]
Length = 1134
Score = 64.3 bits (155), Expect = 5e-08
Identities = 31/90 (34%), Positives = 46/90 (51%)
Frame = +1
Query: 19 CGHTXXXXXXXXXXXXXVGVALVEDKMREARLRWFRHVQKRDTYAPVRRCERLTMDGFMR 198
CGH VGVA +E+K+ + RLRWF H+Q+R APV + R
Sbjct: 725 CGHVRKDRVRNDDIRDRVGVAPIEEKLVQHRLRWFGHIQRRPPEAPVNSGRLKRAENVKR 784
Query: 199 DRGRPKTYWREVIRQDVV*VQLTEYITLDR 288
RGRP W E +++D+ +T+ + +DR
Sbjct: 785 GRGRPNLTWEESVKRDMKDWSITKELAMDR 814