BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00009235
         (926 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006358437.1| PREDICTED: mitochondrial tRNA-specific 2-thi...   556   e-156
ref|XP_004247484.1| PREDICTED: tRNA-specific 2-thiouridylase Mnm...   548   e-154
ref|XP_004142116.1| PREDICTED: tRNA-specific 2-thiouridylase Mnm...   436   e-120
ref|XP_002513510.1| tRNA (5-methylaminomethyl-2-thiouridylate)-m...   436   e-120
ref|XP_006470603.1| PREDICTED: mitochondrial tRNA-specific 2-thi...   436   e-120
emb|CBI16383.3| unnamed protein product [Vitis vinifera]              434   e-119
ref|XP_002282827.1| PREDICTED: tRNA-specific 2-thiouridylase mnm...   434   e-119
ref|XP_003539065.2| PREDICTED: mitochondrial tRNA-specific 2-thi...   425   e-116
ref|XP_004507093.1| PREDICTED: tRNA-specific 2-thiouridylase Mnm...   424   e-116
gb|EXB93298.1| tRNA-specific 2-thiouridylase mnmA [Morus notabilis]   423   e-116
ref|XP_004301461.1| PREDICTED: tRNA-specific 2-thiouridylase Mnm...   422   e-116
ref|XP_002298404.2| hypothetical protein POPTR_0001s26620g [Popu...   421   e-115
gb|ESW04011.1| hypothetical protein PHAVU_011G059600g [Phaseolus...   420   e-115
gb|EOY32661.1| Transferases,tRNA-methyltransferases [Theobroma c...   419   e-115
ref|NP_175542.2| tRNA (5-methylaminomethyl-2-thiouridylate)-meth...   417   e-114
dbj|BAD95081.1| hypothetical protein [Arabidopsis thaliana]           416   e-114
ref|XP_002894309.1| tRNA (5-methylaminomethyl-2-thiouridylate)-m...   415   e-113
ref|XP_006307321.1| hypothetical protein CARUB_v10008942mg [Caps...   414   e-113
ref|XP_006280360.1| hypothetical protein CARUB_v10026287mg [Caps...   413   e-113
gb|AAD30642.1|AC006085_15 Unknown protein [Arabidopsis thaliana]...   409   e-112

>ref|XP_006358437.1| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1-like
           [Solanum tuberosum]
          Length = 488

 Score =  556 bits (1433), Expect = e-156
 Identities = 276/308 (89%), Positives = 282/308 (91%)
 Frame = -1

Query: 926 RAAMSTILLSLQSSHPLKHLFSRYPFQKPLNQVFSQPRKVTTTARRXXXXXXXXXXXPIR 747
           RA MSTI L  Q +H LKHLFS YPFQKPL QVFSQPRK+TT ARR           PIR
Sbjct: 3   RATMSTISLPFQYTHSLKHLFSLYPFQKPLIQVFSQPRKITTIARRLFSLKPLAVSSPIR 62

Query: 746 NYVDEIIDPTYLSSSMPSKNPLKVAVLVSGGVDSSVALRLLHAAGHSCTAFYLKIWFQED 567
           NY DE I+PTYLS SMP KNPLKVAVLVSGGVDSSVALRLLHAAGHSCTAFYLKIWFQED
Sbjct: 63  NYGDEKINPTYLSCSMPHKNPLKVAVLVSGGVDSSVALRLLHAAGHSCTAFYLKIWFQED 122

Query: 566 FENFWSECPWEDDLKYAKAVCDQVDVPLEVVHLTDEYWNNVVSYIIEEYKCGRTPNPDVL 387
           FEN+WSECPWEDDLKYAKAVCDQVDVPLEVVHLTDEYWNNVVSYIIEEYKCGRTPNPDVL
Sbjct: 123 FENYWSECPWEDDLKYAKAVCDQVDVPLEVVHLTDEYWNNVVSYIIEEYKCGRTPNPDVL 182

Query: 386 CNTRIKFGAFMDAISGMEFDFVASGHYAKIVHASTEQLDEPSVLKLSKDMVKDQTYFLSH 207
           CNTRIKFGAFMDAISGMEFDFVASGHYAKIVHAST QLDEPS+LKLSKDMVKDQTYFLSH
Sbjct: 183 CNTRIKFGAFMDAISGMEFDFVASGHYAKIVHASTAQLDEPSILKLSKDMVKDQTYFLSH 242

Query: 206 LSQAQLKRLIFPLGCIQKDEVRMLAKSFNLPNQDRKDSQGICFLGKIKFSEFVARHIGES 27
           LSQAQLKRLIFPLGCIQKDEVR LAKSFNLPNQDRKDSQGICFLGKIKFSEFVARHIGES
Sbjct: 243 LSQAQLKRLIFPLGCIQKDEVRTLAKSFNLPNQDRKDSQGICFLGKIKFSEFVARHIGES 302

Query: 26  EGVILEAE 3
           EG+ILEAE
Sbjct: 303 EGIILEAE 310


>ref|XP_004247484.1| PREDICTED: tRNA-specific 2-thiouridylase MnmA-like [Solanum
           lycopersicum]
          Length = 489

 Score =  548 bits (1413), Expect = e-154
 Identities = 275/308 (89%), Positives = 281/308 (91%)
 Frame = -1

Query: 926 RAAMSTILLSLQSSHPLKHLFSRYPFQKPLNQVFSQPRKVTTTARRXXXXXXXXXXXPIR 747
           RA MSTI L  Q +H    LFS YPFQKPL QVFSQPRK+TTTARR           PIR
Sbjct: 3   RATMSTIPLPFQYAH----LFSLYPFQKPLIQVFSQPRKITTTARRLFSLKPLAVSSPIR 58

Query: 746 NYVDEIIDPTYLSSSMPSKNPLKVAVLVSGGVDSSVALRLLHAAGHSCTAFYLKIWFQED 567
           NY DE IDPTYLS SMP KNPLKVAVLVSGGVDSSVALRLLHAAGHSCTAFYLKIWFQED
Sbjct: 59  NYGDERIDPTYLSCSMPHKNPLKVAVLVSGGVDSSVALRLLHAAGHSCTAFYLKIWFQED 118

Query: 566 FENFWSECPWEDDLKYAKAVCDQVDVPLEVVHLTDEYWNNVVSYIIEEYKCGRTPNPDVL 387
           FEN+WSECPWEDDLKYAK VCDQVDVPLEVVHLTDEYWNNVVSYIIEEYKCGRTPNPDVL
Sbjct: 119 FENYWSECPWEDDLKYAKGVCDQVDVPLEVVHLTDEYWNNVVSYIIEEYKCGRTPNPDVL 178

Query: 386 CNTRIKFGAFMDAISGMEFDFVASGHYAKIVHASTEQLDEPSVLKLSKDMVKDQTYFLSH 207
           CNTRIKFGAFMDAISGMEFDFVASGHYAKIVHASTEQLDEPSVL+LSKDMVKDQTYFLSH
Sbjct: 179 CNTRIKFGAFMDAISGMEFDFVASGHYAKIVHASTEQLDEPSVLELSKDMVKDQTYFLSH 238

Query: 206 LSQAQLKRLIFPLGCIQKDEVRMLAKSFNLPNQDRKDSQGICFLGKIKFSEFVARHIGES 27
           LSQAQLKRLIFPLGCIQKDEVRMLAKSFNLPNQ+RKDSQGICFLGKIKFSEFVARHIGES
Sbjct: 239 LSQAQLKRLIFPLGCIQKDEVRMLAKSFNLPNQERKDSQGICFLGKIKFSEFVARHIGES 298

Query: 26  EGVILEAE 3
           EG+ILEAE
Sbjct: 299 EGIILEAE 306


>ref|XP_004142116.1| PREDICTED: tRNA-specific 2-thiouridylase MnmA-like [Cucumis
           sativus] gi|449524848|ref|XP_004169433.1| PREDICTED:
           tRNA-specific 2-thiouridylase MnmA-like [Cucumis
           sativus]
          Length = 538

 Score =  436 bits (1122), Expect = e-120
 Identities = 209/238 (87%), Positives = 224/238 (94%)
 Frame = -1

Query: 716 YLSSSMPSKNPLKVAVLVSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSECPW 537
           +LS SMP+  PLKVAVL+SGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSECPW
Sbjct: 72  FLSCSMPTY-PLKVAVLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSECPW 130

Query: 536 EDDLKYAKAVCDQVDVPLEVVHLTDEYWNNVVSYIIEEYKCGRTPNPDVLCNTRIKFGAF 357
           +DDLKYAKAVCDQVDVPLEVVHLT+EYW NVVSYIIEEY+CGRTPNPDVLCNTRIKFGAF
Sbjct: 131 DDDLKYAKAVCDQVDVPLEVVHLTEEYWRNVVSYIIEEYRCGRTPNPDVLCNTRIKFGAF 190

Query: 356 MDAISGMEFDFVASGHYAKIVHASTEQLDEPSVLKLSKDMVKDQTYFLSHLSQAQLKRLI 177
           MDAIS MEFD+VASGHYA ++H S +Q+D+PSVL+LSKDMVKDQTYFLSHLSQ QLKRL+
Sbjct: 191 MDAISNMEFDYVASGHYANVIHPSADQMDKPSVLELSKDMVKDQTYFLSHLSQNQLKRLL 250

Query: 176 FPLGCIQKDEVRMLAKSFNLPNQDRKDSQGICFLGKIKFSEFVARHIGESEGVILEAE 3
           FPLGCI KDEVR LA  FNLPN+DRKDSQGICFLGKIKFSEFVARHIGE EGVILEAE
Sbjct: 251 FPLGCIPKDEVRKLAAKFNLPNKDRKDSQGICFLGKIKFSEFVARHIGEDEGVILEAE 308


>ref|XP_002513510.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase,
           putative [Ricinus communis] gi|223547418|gb|EEF48913.1|
           tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase,
           putative [Ricinus communis]
          Length = 497

 Score =  436 bits (1122), Expect = e-120
 Identities = 204/243 (83%), Positives = 227/243 (93%)
 Frame = -1

Query: 731 IIDPTYLSSSMPSKNPLKVAVLVSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFW 552
           II+P YLS  +P KN L++A+L+SGGVDSSVALRLLHAAGH CTAFYLKIWFQEDFENFW
Sbjct: 55  IIEPNYLSCCLPDKNNLRIALLLSGGVDSSVALRLLHAAGHHCTAFYLKIWFQEDFENFW 114

Query: 551 SECPWEDDLKYAKAVCDQVDVPLEVVHLTDEYWNNVVSYIIEEYKCGRTPNPDVLCNTRI 372
           SECPWE+DLKYAKAVCDQVD+PLEVVHLTDEYW NVVSYIIEEY+CGRTPNPDVLCNTRI
Sbjct: 115 SECPWEEDLKYAKAVCDQVDIPLEVVHLTDEYWKNVVSYIIEEYRCGRTPNPDVLCNTRI 174

Query: 371 KFGAFMDAISGMEFDFVASGHYAKIVHASTEQLDEPSVLKLSKDMVKDQTYFLSHLSQAQ 192
           KFGAFMDAI+ MEFD+VASGHYAK++H S +++++PSVL+LSKDMVKDQTYFLSHLSQAQ
Sbjct: 175 KFGAFMDAINNMEFDYVASGHYAKVIHPSADEINQPSVLELSKDMVKDQTYFLSHLSQAQ 234

Query: 191 LKRLIFPLGCIQKDEVRMLAKSFNLPNQDRKDSQGICFLGKIKFSEFVARHIGESEGVIL 12
           L+RLIFPLG I KDEVR LA  FNLPN+DRKDSQGICFLGKIKFSEFVARHIGE EG++L
Sbjct: 235 LRRLIFPLGGISKDEVRKLATLFNLPNKDRKDSQGICFLGKIKFSEFVARHIGEMEGIML 294

Query: 11  EAE 3
           EAE
Sbjct: 295 EAE 297


>ref|XP_006470603.1| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1-like
           [Citrus sinensis]
          Length = 525

 Score =  436 bits (1120), Expect = e-120
 Identities = 208/242 (85%), Positives = 225/242 (92%)
 Frame = -1

Query: 728 IDPTYLSSSMPSKNPLKVAVLVSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWS 549
           I+P YLS SMP +  LKVAVL+SGGVDSSVALRLLH+AGHSCTAFYLKIWFQEDFENFW+
Sbjct: 55  IEPRYLSCSMPHQKGLKVAVLLSGGVDSSVALRLLHSAGHSCTAFYLKIWFQEDFENFWT 114

Query: 548 ECPWEDDLKYAKAVCDQVDVPLEVVHLTDEYWNNVVSYIIEEYKCGRTPNPDVLCNTRIK 369
           ECPWE+D+KYAKAVCDQVDVPLEVVHLTDEYW NVVSYIIEEY+CGRTPNPDVLCNTRIK
Sbjct: 115 ECPWEEDMKYAKAVCDQVDVPLEVVHLTDEYWKNVVSYIIEEYRCGRTPNPDVLCNTRIK 174

Query: 368 FGAFMDAISGMEFDFVASGHYAKIVHASTEQLDEPSVLKLSKDMVKDQTYFLSHLSQAQL 189
           FGAFMDAIS MEFD+VASGHYAK+VH+S +Q  +PSVL+LSKD VKDQTYFLSHLSQAQL
Sbjct: 175 FGAFMDAISSMEFDYVASGHYAKVVHSSADQEYKPSVLELSKDKVKDQTYFLSHLSQAQL 234

Query: 188 KRLIFPLGCIQKDEVRMLAKSFNLPNQDRKDSQGICFLGKIKFSEFVARHIGESEGVILE 9
           KRLIFPLGCI K+EVR  A  F+LPN+DRKDSQGICFLGKIKFSEFVARHIGE EGVILE
Sbjct: 235 KRLIFPLGCISKEEVRKFATQFDLPNKDRKDSQGICFLGKIKFSEFVARHIGEMEGVILE 294

Query: 8   AE 3
           AE
Sbjct: 295 AE 296


>emb|CBI16383.3| unnamed protein product [Vitis vinifera]
          Length = 544

 Score =  434 bits (1115), Expect = e-119
 Identities = 208/238 (87%), Positives = 223/238 (93%)
 Frame = -1

Query: 716 YLSSSMPSKNPLKVAVLVSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSECPW 537
           YLS S+P+ N LK+AVL+SGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSECPW
Sbjct: 78  YLSCSLPN-NRLKIAVLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSECPW 136

Query: 536 EDDLKYAKAVCDQVDVPLEVVHLTDEYWNNVVSYIIEEYKCGRTPNPDVLCNTRIKFGAF 357
           EDDLKYAKAVCDQVDVPLEVVHLTDEYW NVVSYIIEEY+CGRTPNPDVLCNTRIKFGAF
Sbjct: 137 EDDLKYAKAVCDQVDVPLEVVHLTDEYWKNVVSYIIEEYRCGRTPNPDVLCNTRIKFGAF 196

Query: 356 MDAISGMEFDFVASGHYAKIVHASTEQLDEPSVLKLSKDMVKDQTYFLSHLSQAQLKRLI 177
           MDAIS  EFD+VASGHYA +VH+ T+Q+D+PSVL+LSKDMVKDQTYFLSHLSQ QLKRLI
Sbjct: 197 MDAISSKEFDYVASGHYANVVHSFTDQMDKPSVLELSKDMVKDQTYFLSHLSQIQLKRLI 256

Query: 176 FPLGCIQKDEVRMLAKSFNLPNQDRKDSQGICFLGKIKFSEFVARHIGESEGVILEAE 3
           FPLGCI KDEVR LA   +LPN+DRKDSQGICFLGKIKFSEFVARHIGE EG+ILEAE
Sbjct: 257 FPLGCIPKDEVRSLATKLDLPNRDRKDSQGICFLGKIKFSEFVARHIGEKEGIILEAE 314


>ref|XP_002282827.1| PREDICTED: tRNA-specific 2-thiouridylase mnmA-like [Vitis vinifera]
          Length = 540

 Score =  434 bits (1115), Expect = e-119
 Identities = 208/238 (87%), Positives = 223/238 (93%)
 Frame = -1

Query: 716 YLSSSMPSKNPLKVAVLVSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSECPW 537
           YLS S+P+ N LK+AVL+SGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSECPW
Sbjct: 74  YLSCSLPN-NRLKIAVLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSECPW 132

Query: 536 EDDLKYAKAVCDQVDVPLEVVHLTDEYWNNVVSYIIEEYKCGRTPNPDVLCNTRIKFGAF 357
           EDDLKYAKAVCDQVDVPLEVVHLTDEYW NVVSYIIEEY+CGRTPNPDVLCNTRIKFGAF
Sbjct: 133 EDDLKYAKAVCDQVDVPLEVVHLTDEYWKNVVSYIIEEYRCGRTPNPDVLCNTRIKFGAF 192

Query: 356 MDAISGMEFDFVASGHYAKIVHASTEQLDEPSVLKLSKDMVKDQTYFLSHLSQAQLKRLI 177
           MDAIS  EFD+VASGHYA +VH+ T+Q+D+PSVL+LSKDMVKDQTYFLSHLSQ QLKRLI
Sbjct: 193 MDAISSKEFDYVASGHYANVVHSFTDQMDKPSVLELSKDMVKDQTYFLSHLSQIQLKRLI 252

Query: 176 FPLGCIQKDEVRMLAKSFNLPNQDRKDSQGICFLGKIKFSEFVARHIGESEGVILEAE 3
           FPLGCI KDEVR LA   +LPN+DRKDSQGICFLGKIKFSEFVARHIGE EG+ILEAE
Sbjct: 253 FPLGCIPKDEVRSLATKLDLPNRDRKDSQGICFLGKIKFSEFVARHIGEKEGIILEAE 310


>ref|XP_003539065.2| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1-like
           isoform X1 [Glycine max]
          Length = 502

 Score =  425 bits (1093), Expect = e-116
 Identities = 201/238 (84%), Positives = 220/238 (92%)
 Frame = -1

Query: 716 YLSSSMPSKNPLKVAVLVSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSECPW 537
           YL  SMP  +PL+VAVLVSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSECPW
Sbjct: 65  YLRCSMPQNSPLRVAVLVSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSECPW 124

Query: 536 EDDLKYAKAVCDQVDVPLEVVHLTDEYWNNVVSYIIEEYKCGRTPNPDVLCNTRIKFGAF 357
           EDDLKYAK VC+QVDVPLEVVHLTDEYWNNVVSY+IEEY  GRTPNPDVLCNTRIKFGAF
Sbjct: 125 EDDLKYAKDVCNQVDVPLEVVHLTDEYWNNVVSYLIEEYSSGRTPNPDVLCNTRIKFGAF 184

Query: 356 MDAISGMEFDFVASGHYAKIVHASTEQLDEPSVLKLSKDMVKDQTYFLSHLSQAQLKRLI 177
           +DAI GM FD+VASGHYA ++H  +++ DEPSVL+LS+DMVKDQTYFLSHLSQ+QLK+L+
Sbjct: 185 LDAIGGMGFDYVASGHYANVIHPCSDRRDEPSVLELSQDMVKDQTYFLSHLSQSQLKQLL 244

Query: 176 FPLGCIQKDEVRMLAKSFNLPNQDRKDSQGICFLGKIKFSEFVARHIGESEGVILEAE 3
           FPLGCI KDEVR LA  F+LPN+DRKDSQGICFLGKI+FSEFVARHIGE EGVILEAE
Sbjct: 245 FPLGCIPKDEVRKLATKFDLPNKDRKDSQGICFLGKIRFSEFVARHIGEREGVILEAE 302


>ref|XP_004507093.1| PREDICTED: tRNA-specific 2-thiouridylase MnmA-like [Cicer
           arietinum]
          Length = 484

 Score =  424 bits (1091), Expect = e-116
 Identities = 203/242 (83%), Positives = 223/242 (92%)
 Frame = -1

Query: 728 IDPTYLSSSMPSKNPLKVAVLVSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWS 549
           +DP YL  SMP  NPL+VAVL+SGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWS
Sbjct: 56  LDP-YLRCSMPH-NPLRVAVLISGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWS 113

Query: 548 ECPWEDDLKYAKAVCDQVDVPLEVVHLTDEYWNNVVSYIIEEYKCGRTPNPDVLCNTRIK 369
           ECPWEDDLKYAK VC+QV+VPLEVVHLTDEYW NVVSYIIEEY+CGRTPNPDVLCNTRIK
Sbjct: 114 ECPWEDDLKYAKDVCNQVEVPLEVVHLTDEYWKNVVSYIIEEYQCGRTPNPDVLCNTRIK 173

Query: 368 FGAFMDAISGMEFDFVASGHYAKIVHASTEQLDEPSVLKLSKDMVKDQTYFLSHLSQAQL 189
           FGAF+DAIS M FD+VASGHYA ++H S +Q+D PS L+LS+DMVKDQTYFLSHLSQ+QL
Sbjct: 174 FGAFLDAISDMGFDYVASGHYANVIHPSADQMDGPSTLELSQDMVKDQTYFLSHLSQSQL 233

Query: 188 KRLIFPLGCIQKDEVRMLAKSFNLPNQDRKDSQGICFLGKIKFSEFVARHIGESEGVILE 9
           K+L+FPLGCI KDEVR LA  F+LPN+DRKDSQGICFLGKIKFSEFVARHIGE EG+ILE
Sbjct: 234 KQLLFPLGCIPKDEVRRLATKFDLPNKDRKDSQGICFLGKIKFSEFVARHIGEKEGIILE 293

Query: 8   AE 3
           AE
Sbjct: 294 AE 295


>gb|EXB93298.1| tRNA-specific 2-thiouridylase mnmA [Morus notabilis]
          Length = 580

 Score =  423 bits (1088), Expect = e-116
 Identities = 204/245 (83%), Positives = 225/245 (91%)
 Frame = -1

Query: 737 DEIIDPTYLSSSMPSKNPLKVAVLVSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFEN 558
           D  I+P YLS SMP K  L+VAVL+SGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFEN
Sbjct: 114 DGDIEP-YLSCSMPHKR-LRVAVLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFEN 171

Query: 557 FWSECPWEDDLKYAKAVCDQVDVPLEVVHLTDEYWNNVVSYIIEEYKCGRTPNPDVLCNT 378
           FWSECPWE+DLKYAKAVC Q++VPLEVVHLTDEYW NVVSYII+EY+CGRTPNPDVLCNT
Sbjct: 172 FWSECPWEEDLKYAKAVCSQIEVPLEVVHLTDEYWKNVVSYIIDEYRCGRTPNPDVLCNT 231

Query: 377 RIKFGAFMDAISGMEFDFVASGHYAKIVHASTEQLDEPSVLKLSKDMVKDQTYFLSHLSQ 198
           RIKFG+FMDAIS MEFD+VASGHYA +VH+ T +  + SVL+LS+DMVKDQTYFLSHLSQ
Sbjct: 232 RIKFGSFMDAISSMEFDYVASGHYANVVHSFTNERGDASVLELSQDMVKDQTYFLSHLSQ 291

Query: 197 AQLKRLIFPLGCIQKDEVRMLAKSFNLPNQDRKDSQGICFLGKIKFSEFVARHIGESEGV 18
           AQLKRL+FPLGCI K+EVR LAK F+LPN+DRKDSQGICFLGKIKFSEFVARHIGE EG+
Sbjct: 292 AQLKRLVFPLGCISKEEVRKLAKKFDLPNKDRKDSQGICFLGKIKFSEFVARHIGEKEGI 351

Query: 17  ILEAE 3
           ILEAE
Sbjct: 352 ILEAE 356


>ref|XP_004301461.1| PREDICTED: tRNA-specific 2-thiouridylase MnmA-like [Fragaria vesca
           subsp. vesca]
          Length = 475

 Score =  422 bits (1086), Expect = e-116
 Identities = 198/239 (82%), Positives = 219/239 (91%)
 Frame = -1

Query: 719 TYLSSSMPSKNPLKVAVLVSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSECP 540
           +YLS SMP K PLKVAVL+SGGVDSSVALRLLHAAGHSCTAFYLKIWFQE FENFWSECP
Sbjct: 62  SYLSCSMPHKKPLKVAVLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEGFENFWSECP 121

Query: 539 WEDDLKYAKAVCDQVDVPLEVVHLTDEYWNNVVSYIIEEYKCGRTPNPDVLCNTRIKFGA 360
           WE+DL YAKAVC+QVDVPLEVVHLTDEYW NVVSYIIEEY+CGRTPNPDVLCNTRIKFG 
Sbjct: 122 WEEDLNYAKAVCNQVDVPLEVVHLTDEYWKNVVSYIIEEYRCGRTPNPDVLCNTRIKFGV 181

Query: 359 FMDAISGMEFDFVASGHYAKIVHASTEQLDEPSVLKLSKDMVKDQTYFLSHLSQAQLKRL 180
           FMDAI  MEFD+VASGHYAK+VH S +Q D+ SVL+LS+DMVKDQTYFLSHLSQ QLK+L
Sbjct: 182 FMDAIDSMEFDYVASGHYAKVVHLSADQTDKDSVLELSQDMVKDQTYFLSHLSQDQLKKL 241

Query: 179 IFPLGCIQKDEVRMLAKSFNLPNQDRKDSQGICFLGKIKFSEFVARHIGESEGVILEAE 3
           IFPLGC+ KD+VR LA  F+LPN++RKDSQGICFLGK++FSEF+ +HIGE EGVILEAE
Sbjct: 242 IFPLGCLSKDKVRKLATKFDLPNKERKDSQGICFLGKVRFSEFIGKHIGEKEGVILEAE 300


>ref|XP_002298404.2| hypothetical protein POPTR_0001s26620g [Populus trichocarpa]
           gi|550348245|gb|EEE83209.2| hypothetical protein
           POPTR_0001s26620g [Populus trichocarpa]
          Length = 512

 Score =  421 bits (1082), Expect = e-115
 Identities = 199/243 (81%), Positives = 223/243 (91%), Gaps = 1/243 (0%)
 Frame = -1

Query: 728 IDPTYLSSSMPSKN-PLKVAVLVSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFW 552
           +DP YLS  M  K+ PL++AVL+SGGVDSSVALRLLHAAGH CTAFYLKIWFQEDF NFW
Sbjct: 70  VDPYYLSCCMADKDKPLRIAVLLSGGVDSSVALRLLHAAGHHCTAFYLKIWFQEDFNNFW 129

Query: 551 SECPWEDDLKYAKAVCDQVDVPLEVVHLTDEYWNNVVSYIIEEYKCGRTPNPDVLCNTRI 372
           SECPWE+DLK+AK VCDQV VPLEVVHLTDEYW+NVVSYIIEEY+CGRTPNPDVLCNTRI
Sbjct: 130 SECPWEEDLKFAKGVCDQVGVPLEVVHLTDEYWSNVVSYIIEEYRCGRTPNPDVLCNTRI 189

Query: 371 KFGAFMDAISGMEFDFVASGHYAKIVHASTEQLDEPSVLKLSKDMVKDQTYFLSHLSQAQ 192
           KFGAFMDAI+ MEFD+VASGHYA ++H  ++Q+++PSVL+LSKD +KDQTYFLSHL+QAQ
Sbjct: 190 KFGAFMDAINNMEFDYVASGHYAHVIHPVSDQINKPSVLELSKDKLKDQTYFLSHLTQAQ 249

Query: 191 LKRLIFPLGCIQKDEVRMLAKSFNLPNQDRKDSQGICFLGKIKFSEFVARHIGESEGVIL 12
           LKRLIFPLGCI K+EVR LA  F+LPN+DRKDSQGICFLGKIKFSEFV RHIGESEGVIL
Sbjct: 250 LKRLIFPLGCIPKEEVRNLASKFDLPNKDRKDSQGICFLGKIKFSEFVGRHIGESEGVIL 309

Query: 11  EAE 3
           EAE
Sbjct: 310 EAE 312


>gb|ESW04011.1| hypothetical protein PHAVU_011G059600g [Phaseolus vulgaris]
          Length = 488

 Score =  420 bits (1080), Expect = e-115
 Identities = 197/238 (82%), Positives = 219/238 (92%)
 Frame = -1

Query: 716 YLSSSMPSKNPLKVAVLVSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSECPW 537
           YL  S+P  +PL+VAVLVSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSECPW
Sbjct: 63  YLRCSLPQNSPLRVAVLVSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSECPW 122

Query: 536 EDDLKYAKAVCDQVDVPLEVVHLTDEYWNNVVSYIIEEYKCGRTPNPDVLCNTRIKFGAF 357
           E+DLKYAKAVC+QVDVPLEVVHLTDEYWNNVVSY+IEEY  GRTPNPDVLCNTRIKFGAF
Sbjct: 123 EEDLKYAKAVCEQVDVPLEVVHLTDEYWNNVVSYLIEEYSSGRTPNPDVLCNTRIKFGAF 182

Query: 356 MDAISGMEFDFVASGHYAKIVHASTEQLDEPSVLKLSKDMVKDQTYFLSHLSQAQLKRLI 177
           +DAI GM FD+VASGHYA ++H   + ++ PSVL+LS+DMVKDQTYFLSHLSQ+QLK+L+
Sbjct: 183 LDAIGGMGFDYVASGHYANVIHPCADGMNGPSVLELSQDMVKDQTYFLSHLSQSQLKQLL 242

Query: 176 FPLGCIQKDEVRMLAKSFNLPNQDRKDSQGICFLGKIKFSEFVARHIGESEGVILEAE 3
           FPLGCI KDEVR LA  F+LPN+DRKDSQGICFLGKI+FSEFVARHIGE EG+ILEAE
Sbjct: 243 FPLGCIPKDEVRRLATEFDLPNKDRKDSQGICFLGKIRFSEFVARHIGEREGIILEAE 300


>gb|EOY32661.1| Transferases,tRNA-methyltransferases [Theobroma cacao]
          Length = 1075

 Score =  419 bits (1077), Expect = e-115
 Identities = 196/242 (80%), Positives = 223/242 (92%)
 Frame = -1

Query: 728 IDPTYLSSSMPSKNPLKVAVLVSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWS 549
           +DP +LS  MP +  LKVAVL+SGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFEN+W+
Sbjct: 67  LDPRFLSCCMPEQR-LKVAVLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENYWT 125

Query: 548 ECPWEDDLKYAKAVCDQVDVPLEVVHLTDEYWNNVVSYIIEEYKCGRTPNPDVLCNTRIK 369
            CPWE+DLK+A++VCDQV VPLEVVHLT EYW NVVSYIIEEYKCGRTPNPDVLCNTRIK
Sbjct: 126 ACPWEEDLKHARSVCDQVYVPLEVVHLTGEYWKNVVSYIIEEYKCGRTPNPDVLCNTRIK 185

Query: 368 FGAFMDAISGMEFDFVASGHYAKIVHASTEQLDEPSVLKLSKDMVKDQTYFLSHLSQAQL 189
           FGAFMDAI+ M++D++ASGHYA +VH S +Q+D+PS+L+LSKDMVKDQTYFLSHLSQAQL
Sbjct: 186 FGAFMDAINSMDYDYIASGHYANVVHPSADQIDKPSILELSKDMVKDQTYFLSHLSQAQL 245

Query: 188 KRLIFPLGCIQKDEVRMLAKSFNLPNQDRKDSQGICFLGKIKFSEFVARHIGESEGVILE 9
           KRLIFPLGC+ KDEVR LA  F+LPN+DRKDSQGICFLGKI+FS+FVARHIGE EG+ILE
Sbjct: 246 KRLIFPLGCLAKDEVRQLAAKFDLPNKDRKDSQGICFLGKIRFSDFVARHIGEMEGIILE 305

Query: 8   AE 3
           AE
Sbjct: 306 AE 307


>ref|NP_175542.2| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Arabidopsis thaliana] gi|332194528|gb|AEE32649.1| tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Arabidopsis thaliana]
          Length = 497

 Score =  417 bits (1071), Expect(2) = e-114
 Identities = 203/251 (80%), Positives = 223/251 (88%), Gaps = 2/251 (0%)
 Frame = -1

Query: 749 RNYVDE--IIDPTYLSSSMPSKNPLKVAVLVSGGVDSSVALRLLHAAGHSCTAFYLKIWF 576
           RNY     I+D  YLS SMP K PL+VAVL+SGGVDSSVALRLLHAAGHSCTAFYLKIWF
Sbjct: 60  RNYSRHAFIVDQ-YLSCSMPEK-PLRVAVLLSGGVDSSVALRLLHAAGHSCTAFYLKIWF 117

Query: 575 QEDFENFWSECPWEDDLKYAKAVCDQVDVPLEVVHLTDEYWNNVVSYIIEEYKCGRTPNP 396
           QE FENFW++CPWEDDLKYAK VC+QVDVPLEVVHLTDEYW  VVSYIIEEY+CGRTPNP
Sbjct: 118 QEGFENFWNQCPWEDDLKYAKHVCEQVDVPLEVVHLTDEYWERVVSYIIEEYRCGRTPNP 177

Query: 395 DVLCNTRIKFGAFMDAISGMEFDFVASGHYAKIVHASTEQLDEPSVLKLSKDMVKDQTYF 216
           DVLCNTRIKFGAFMDAIS ME+D+V SGHYAK+VH   +Q D  SVL+LS+DMVKDQTYF
Sbjct: 178 DVLCNTRIKFGAFMDAISDMEYDYVGSGHYAKVVHPPADQNDASSVLELSQDMVKDQTYF 237

Query: 215 LSHLSQAQLKRLIFPLGCIQKDEVRMLAKSFNLPNQDRKDSQGICFLGKIKFSEFVARHI 36
           LSHLSQ QLKRL+FPLGC++KDEVR LA  F+LPN+DRKDSQGICFLGKIKFS+FV RHI
Sbjct: 238 LSHLSQTQLKRLLFPLGCVKKDEVRKLATQFDLPNKDRKDSQGICFLGKIKFSDFVCRHI 297

Query: 35  GESEGVILEAE 3
           GE EG+ILEAE
Sbjct: 298 GEMEGIILEAE 308



 Score = 24.6 bits (52), Expect(2) = e-114
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -3

Query: 900 FPSIFTPSQALILPLPFPKTP*PGFLSAKKGYN 802
           FPS F+ S +  LP P    P    +S+ + Y+
Sbjct: 31  FPSFFSSSSSSQLPSPQSSNPITPLISSNRNYS 63


>dbj|BAD95081.1| hypothetical protein [Arabidopsis thaliana]
          Length = 497

 Score =  416 bits (1068), Expect(2) = e-114
 Identities = 202/251 (80%), Positives = 223/251 (88%), Gaps = 2/251 (0%)
 Frame = -1

Query: 749 RNYVDE--IIDPTYLSSSMPSKNPLKVAVLVSGGVDSSVALRLLHAAGHSCTAFYLKIWF 576
           RNY     I+D  YLS SMP K PL+VAVL+SGGVDSSVALRLLHAAGHSCTAFYLKIWF
Sbjct: 60  RNYSRHAFIVDQ-YLSCSMPEK-PLRVAVLLSGGVDSSVALRLLHAAGHSCTAFYLKIWF 117

Query: 575 QEDFENFWSECPWEDDLKYAKAVCDQVDVPLEVVHLTDEYWNNVVSYIIEEYKCGRTPNP 396
           QE FENFW++CPWEDDLKYAK VC+QVDVPLEVVHLTDEYW  VVSYIIEEY+CGRTPNP
Sbjct: 118 QEGFENFWNQCPWEDDLKYAKHVCEQVDVPLEVVHLTDEYWERVVSYIIEEYRCGRTPNP 177

Query: 395 DVLCNTRIKFGAFMDAISGMEFDFVASGHYAKIVHASTEQLDEPSVLKLSKDMVKDQTYF 216
           DVLCNTRIKFGAFMDAIS ME+D+V SGHYA++VH   +Q D  SVL+LS+DMVKDQTYF
Sbjct: 178 DVLCNTRIKFGAFMDAISDMEYDYVGSGHYARVVHPPADQNDASSVLELSQDMVKDQTYF 237

Query: 215 LSHLSQAQLKRLIFPLGCIQKDEVRMLAKSFNLPNQDRKDSQGICFLGKIKFSEFVARHI 36
           LSHLSQ QLKRL+FPLGC++KDEVR LA  F+LPN+DRKDSQGICFLGKIKFS+FV RHI
Sbjct: 238 LSHLSQTQLKRLLFPLGCVKKDEVRKLATQFDLPNKDRKDSQGICFLGKIKFSDFVCRHI 297

Query: 35  GESEGVILEAE 3
           GE EG+ILEAE
Sbjct: 298 GEMEGIILEAE 308



 Score = 24.6 bits (52), Expect(2) = e-114
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -3

Query: 900 FPSIFTPSQALILPLPFPKTP*PGFLSAKKGYN 802
           FPS F+ S +  LP P    P    +S+ + Y+
Sbjct: 31  FPSFFSSSSSSQLPSPQSSNPITPLISSNRNYS 63


>ref|XP_002894309.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Arabidopsis lyrata subsp. lyrata]
           gi|297340151|gb|EFH70568.1| tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Arabidopsis lyrata subsp. lyrata]
          Length = 500

 Score =  415 bits (1066), Expect = e-113
 Identities = 198/238 (83%), Positives = 216/238 (90%)
 Frame = -1

Query: 716 YLSSSMPSKNPLKVAVLVSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSECPW 537
           YLS SMP K PL+VAVL+SGGVDSSVALRLLHAAGHSCTAFYLKIWFQE FENFW++CPW
Sbjct: 75  YLSCSMPEK-PLRVAVLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEGFENFWNQCPW 133

Query: 536 EDDLKYAKAVCDQVDVPLEVVHLTDEYWNNVVSYIIEEYKCGRTPNPDVLCNTRIKFGAF 357
           EDDLKYAK VC+QVDVPLEVVHLTDEYW  VVSYIIEEY+CGRTPNPDVLCNTRIKFGAF
Sbjct: 134 EDDLKYAKHVCEQVDVPLEVVHLTDEYWERVVSYIIEEYRCGRTPNPDVLCNTRIKFGAF 193

Query: 356 MDAISGMEFDFVASGHYAKIVHASTEQLDEPSVLKLSKDMVKDQTYFLSHLSQAQLKRLI 177
           MDAIS ME+D+V SGHYAK+VH   +Q D  SVL+LS+DMVKDQTYFLSHLSQ QLKRLI
Sbjct: 194 MDAISDMEYDYVGSGHYAKVVHPPVDQNDASSVLELSQDMVKDQTYFLSHLSQTQLKRLI 253

Query: 176 FPLGCIQKDEVRMLAKSFNLPNQDRKDSQGICFLGKIKFSEFVARHIGESEGVILEAE 3
           FPLGC++KDEVR LA  F+LPN+DRKDSQGICFLGKIKFS+FV  HIGE EG+ILEAE
Sbjct: 254 FPLGCVKKDEVRKLATQFDLPNKDRKDSQGICFLGKIKFSDFVCAHIGEMEGIILEAE 311


>ref|XP_006307321.1| hypothetical protein CARUB_v10008942mg [Capsella rubella]
           gi|482576032|gb|EOA40219.1| hypothetical protein
           CARUB_v10008942mg [Capsella rubella]
          Length = 496

 Score =  414 bits (1063), Expect = e-113
 Identities = 197/238 (82%), Positives = 216/238 (90%)
 Frame = -1

Query: 716 YLSSSMPSKNPLKVAVLVSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSECPW 537
           YLS SMP K PL+VAVL+SGGVDSSVALRLLHAAGHSCTAFYLKIWFQE FENFW +CPW
Sbjct: 71  YLSCSMPEK-PLRVAVLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEGFENFWDQCPW 129

Query: 536 EDDLKYAKAVCDQVDVPLEVVHLTDEYWNNVVSYIIEEYKCGRTPNPDVLCNTRIKFGAF 357
           EDDLKYAK VC+QV VPLEVVHLTDEYW  VVSY+IEEY+CGRTPNPDVLCNTRIKFGAF
Sbjct: 130 EDDLKYAKHVCEQVGVPLEVVHLTDEYWERVVSYLIEEYRCGRTPNPDVLCNTRIKFGAF 189

Query: 356 MDAISGMEFDFVASGHYAKIVHASTEQLDEPSVLKLSKDMVKDQTYFLSHLSQAQLKRLI 177
           MDAIS ME+D+VASGHYAK+VH   +Q D  S+L+LS+DMVKDQTYFLSHLSQ QLKRL+
Sbjct: 190 MDAISDMEYDYVASGHYAKVVHPPADQNDSSSLLELSQDMVKDQTYFLSHLSQTQLKRLL 249

Query: 176 FPLGCIQKDEVRMLAKSFNLPNQDRKDSQGICFLGKIKFSEFVARHIGESEGVILEAE 3
           FPLGC++KDEVR LA  F+LPN+DRKDSQGICFLGKIKFS+FV RHIGE EGVILEAE
Sbjct: 250 FPLGCVKKDEVRKLATQFDLPNKDRKDSQGICFLGKIKFSDFVGRHIGEMEGVILEAE 307


>ref|XP_006280360.1| hypothetical protein CARUB_v10026287mg [Capsella rubella]
           gi|482549064|gb|EOA13258.1| hypothetical protein
           CARUB_v10026287mg [Capsella rubella]
          Length = 494

 Score =  413 bits (1062), Expect = e-113
 Identities = 197/238 (82%), Positives = 217/238 (91%)
 Frame = -1

Query: 716 YLSSSMPSKNPLKVAVLVSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSECPW 537
           YLS SMP K PL+VAVL+SGGVDSSVALRLLHAAGHSCTAFYLKIWFQE FENFW++CPW
Sbjct: 69  YLSCSMPEK-PLRVAVLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEGFENFWNQCPW 127

Query: 536 EDDLKYAKAVCDQVDVPLEVVHLTDEYWNNVVSYIIEEYKCGRTPNPDVLCNTRIKFGAF 357
           EDDLKYAK VC+QV+VPLEVVHLTDEYW  VVSYIIEEY+CGRTPNPDVLCNTRIKFGAF
Sbjct: 128 EDDLKYAKHVCEQVNVPLEVVHLTDEYWEKVVSYIIEEYRCGRTPNPDVLCNTRIKFGAF 187

Query: 356 MDAISGMEFDFVASGHYAKIVHASTEQLDEPSVLKLSKDMVKDQTYFLSHLSQAQLKRLI 177
           MDAIS ME+D+VASGHYAK+VH   +Q D  S+L+LS+DMVKDQTYFLSHLSQ QLKRL+
Sbjct: 188 MDAISDMEYDYVASGHYAKVVHPPADQNDSSSLLELSQDMVKDQTYFLSHLSQTQLKRLL 247

Query: 176 FPLGCIQKDEVRMLAKSFNLPNQDRKDSQGICFLGKIKFSEFVARHIGESEGVILEAE 3
           FPLGC++KDEVR LA  F+LPN+DRKDSQGICFLGKIKFS+FV  HIGE EGVILEAE
Sbjct: 248 FPLGCVKKDEVRKLATQFDLPNKDRKDSQGICFLGKIKFSDFVGTHIGEMEGVILEAE 305


>gb|AAD30642.1|AC006085_15 Unknown protein [Arabidopsis thaliana] gi|119935887|gb|ABM06024.1|
           At1g51310 [Arabidopsis thaliana]
          Length = 421

 Score =  409 bits (1052), Expect = e-112
 Identities = 194/233 (83%), Positives = 213/233 (91%)
 Frame = -1

Query: 701 MPSKNPLKVAVLVSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSECPWEDDLK 522
           MP K PL+VAVL+SGGVDSSVALRLLHAAGHSCTAFYLKIWFQE FENFW++CPWEDDLK
Sbjct: 1   MPEK-PLRVAVLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEGFENFWNQCPWEDDLK 59

Query: 521 YAKAVCDQVDVPLEVVHLTDEYWNNVVSYIIEEYKCGRTPNPDVLCNTRIKFGAFMDAIS 342
           YAK VC+QVDVPLEVVHLTDEYW  VVSYIIEEY+CGRTPNPDVLCNTRIKFGAFMDAIS
Sbjct: 60  YAKHVCEQVDVPLEVVHLTDEYWERVVSYIIEEYRCGRTPNPDVLCNTRIKFGAFMDAIS 119

Query: 341 GMEFDFVASGHYAKIVHASTEQLDEPSVLKLSKDMVKDQTYFLSHLSQAQLKRLIFPLGC 162
            ME+D+V SGHYAK+VH   +Q D  SVL+LS+DMVKDQTYFLSHLSQ QLKRL+FPLGC
Sbjct: 120 DMEYDYVGSGHYAKVVHPPADQNDASSVLELSQDMVKDQTYFLSHLSQTQLKRLLFPLGC 179

Query: 161 IQKDEVRMLAKSFNLPNQDRKDSQGICFLGKIKFSEFVARHIGESEGVILEAE 3
           ++KDEVR LA  F+LPN+DRKDSQGICFLGKIKFS+FV RHIGE EG+ILEAE
Sbjct: 180 VKKDEVRKLATQFDLPNKDRKDSQGICFLGKIKFSDFVCRHIGEMEGIILEAE 232