BLASTX nr result
ID: Atropa21_contig00007912
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00007912
(620 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004250798.1| PREDICTED: pentatricopeptide repeat-containi... 79 8e-13
ref|XP_006343488.1| PREDICTED: pentatricopeptide repeat-containi... 75 1e-11
ref|XP_004296063.1| PREDICTED: pentatricopeptide repeat-containi... 58 8e-11
ref|XP_004493379.1| PREDICTED: pentatricopeptide repeat-containi... 67 5e-09
gb|EOX98269.1| Tetratricopeptide repeat (TPR)-like superfamily p... 55 7e-09
ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containi... 66 7e-09
gb|EMJ00195.1| hypothetical protein PRUPE_ppa002176mg [Prunus pe... 53 1e-08
ref|XP_006487111.1| PREDICTED: pentatricopeptide repeat-containi... 55 1e-08
ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containi... 64 1e-08
emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera] 64 2e-08
ref|XP_006400719.1| hypothetical protein EUTSA_v10012749mg [Eutr... 49 1e-07
ref|XP_006400718.1| hypothetical protein EUTSA_v10012749mg [Eutr... 49 1e-07
ref|XP_002518758.1| pentatricopeptide repeat-containing protein,... 52 2e-07
ref|XP_006423015.1| hypothetical protein CICLE_v10027922mg [Citr... 52 2e-07
ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containi... 61 2e-07
gb|ESW18386.1| hypothetical protein PHAVU_006G036400g [Phaseolus... 60 6e-07
ref|XP_003624942.1| Pentatricopeptide repeat-containing protein ... 60 6e-07
gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula] 60 6e-07
ref|XP_002300569.2| hypothetical protein POPTR_0001s47030g, part... 48 1e-06
ref|XP_006283127.1| hypothetical protein CARUB_v10004150mg [Caps... 43 2e-06
>ref|XP_004250798.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Solanum lycopersicum]
Length = 911
Score = 79.3 bits (194), Expect = 8e-13
Identities = 61/156 (39%), Positives = 79/156 (50%), Gaps = 10/156 (6%)
Frame = -3
Query: 438 LDVFVSNALTNMLPDFDLQKWYLMLRL*GFNITDLVNCCRREKCYAR*S-----LKVLSG 274
LDVFVSNAL NM F + + + DLV+ Y + + LK
Sbjct: 367 LDVFVSNALINMYARFGELSYAQKVFDGMMVVRDLVSWNSLIAAYEQNNVPEKALKYFQE 426
Query: 273 DDVKGDST*PAALVSFYASSFARTIKFLFGRSFHGFIL-----EVDVTLGNTVVDMYANL 109
+ G LVS ASS A+T F RS HGF+L +VDV +GN VVDMYA L
Sbjct: 427 MMINGVQPDLLTLVSL-ASSIAQTKSFRSCRSVHGFVLRRSWIQVDVIMGNAVVDMYAKL 485
Query: 108 GFCDCTHEAIEEVHLKDVVL*NGVTTSNAQDGLARE 1
G C+ + +E+ +KDVV N + T AQ+GLA E
Sbjct: 486 GLIHCSRKVFDEIPIKDVVSWNSMITGYAQNGLASE 521
Score = 57.4 bits (137), Expect = 3e-06
Identities = 46/121 (38%), Positives = 59/121 (48%), Gaps = 14/121 (11%)
Frame = -1
Query: 566 MEHMRLEGL----LQFATVVPVCA*LGDTCKAAN-SLLCYKA*LYLDDLTSLCQMP*QIC 402
++ MRLEG+ + A V+P CA LGD + L K L LD S +
Sbjct: 322 LDEMRLEGIKMDTVTIAVVLPTCAQLGDVVHGMSIHLYVIKHGLELDVFVSNALIN---- 377
Query: 401 YQILICRNGT*CYGCK---------DLISRTLLIAADEKNVMPDKALKYFQEMTSKGIQP 249
+ R G Y K DL+S LIAA E+N +P+KALKYFQEM G+QP
Sbjct: 378 ---MYARFGELSYAQKVFDGMMVVRDLVSWNSLIAAYEQNNVPEKALKYFQEMMINGVQP 434
Query: 248 D 246
D
Sbjct: 435 D 435
>ref|XP_006343488.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like isoform X1 [Solanum tuberosum]
gi|565353132|ref|XP_006343489.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g33990-like isoform X2 [Solanum tuberosum]
gi|565353134|ref|XP_006343490.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g33990-like isoform X3 [Solanum tuberosum]
gi|565353136|ref|XP_006343491.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g33990-like isoform X4 [Solanum tuberosum]
Length = 831
Score = 75.5 bits (184), Expect = 1e-11
Identities = 59/156 (37%), Positives = 78/156 (50%), Gaps = 10/156 (6%)
Frame = -3
Query: 438 LDVFVSNALTNMLPDFDLQKWYLMLRL*GFNITDLVNCCRREKCYAR*S-----LKVLSG 274
LDVFVSNAL NM F + + + DLV+ Y + + LK
Sbjct: 287 LDVFVSNALINMYARFGELRHAQKVFDDMMVVRDLVSWNSLIAAYEQNNVPEKALKYFQE 346
Query: 273 DDVKGDST*PAALVSFYASSFARTIKFLFGRSFHGFI-----LEVDVTLGNTVVDMYANL 109
+ G LVS ASS A+T F RS HGF+ ++ DV +GN VVDMYA L
Sbjct: 347 MMINGIQPDLLTLVSL-ASSIAQTKSFRCCRSVHGFVSRRSWIQEDVIMGNAVVDMYAKL 405
Query: 108 GFCDCTHEAIEEVHLKDVVL*NGVTTSNAQDGLARE 1
G C+ + +E+ +KDVV N + T AQ+GLA E
Sbjct: 406 GLIHCSRKVFDEIPIKDVVSWNSMITGYAQNGLASE 441
>ref|XP_004296063.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Fragaria vesca subsp. vesca]
Length = 867
Score = 57.8 bits (138), Expect(2) = 8e-11
Identities = 35/79 (44%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Frame = -3
Query: 222 ASSFARTIKFLFGRSFHGFIL-----EVDVTLGNTVVDMYANLGFCDCTHEAIEEVHLKD 58
AS A+ GRS HGFIL + DV +GN VVDMYA LG D E + ++D
Sbjct: 400 ASIIAQLSDAEMGRSVHGFILRRDWFKEDVVIGNAVVDMYAKLGAIDSARTVFERLPVRD 459
Query: 57 VVL*NGVTTSNAQDGLARE 1
VV N + T Q+GLA E
Sbjct: 460 VVSWNTLITGYTQNGLASE 478
Score = 35.0 bits (79), Expect(2) = 8e-11
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = -1
Query: 356 KDLISRTLLIAADEKNVMPDKALKYFQEMTSKGIQPD 246
+DL+S +IAA+E+N P AL +F M G++PD
Sbjct: 356 RDLVSWNSIIAANEQNGEPMAALGFFNRMQLSGVKPD 392
>ref|XP_004493379.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cicer arietinum]
Length = 824
Score = 66.6 bits (161), Expect = 5e-09
Identities = 51/154 (33%), Positives = 72/154 (46%), Gaps = 9/154 (5%)
Frame = -3
Query: 435 DVFVSNALTNMLPDF----DLQKWYLMLRL*GFNITDLVNCCRREKCYAR*SLKVLSGDD 268
DVFVSNAL NM F D QK + + + + + + +L+ G
Sbjct: 282 DVFVSNALINMYSKFCRLEDAQKVFDHMEVRDLVSWNSIIAAYEQNDDPNTALRFFKGMQ 341
Query: 267 VKGDST*PAALVSFYASSFARTIKFLFGRSFHGFI-----LEVDVTLGNTVVDMYANLGF 103
+ G +VS S F + RS HGF+ LE DV +GN +V+MYA LG
Sbjct: 342 LVGIRPDLLTVVSL-TSIFGQLSDQRISRSIHGFVMRGEWLEKDVVIGNALVNMYAKLGD 400
Query: 102 CDCTHEAIEEVHLKDVVL*NGVTTSNAQDGLARE 1
+C H E++ KD + N + T AQ+GLA E
Sbjct: 401 MNCAHTVFEQLPSKDTISWNTLITGYAQNGLASE 434
>gb|EOX98269.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao]
Length = 820
Score = 55.5 bits (132), Expect(2) = 7e-09
Identities = 31/67 (46%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Frame = -3
Query: 186 GRSFHGFILE-----VDVTLGNTVVDMYANLGFCDCTHEAIEEVHLKDVVL*NGVTTSNA 22
G+S HGF++ DV GN+VVDMYA LG D H + +KDVV N + T A
Sbjct: 364 GKSVHGFVMRRGWFLKDVISGNSVVDMYAKLGIMDSAHAVFYVLPVKDVVSWNTLITGYA 423
Query: 21 QDGLARE 1
Q+GLA E
Sbjct: 424 QNGLAGE 430
Score = 30.8 bits (68), Expect(2) = 7e-09
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = -1
Query: 356 KDLISRTLLIAADEKNVMPDKALKYFQEMTSKGIQPD 246
+DL+S +IAA E+N P AL F M GI PD
Sbjct: 308 RDLVSWNSIIAAYEQNDDPHMALGLFYNMKLIGINPD 344
>ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like isoform X1 [Glycine max]
gi|571544149|ref|XP_006602168.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g33990-like isoform X2 [Glycine max]
gi|571544153|ref|XP_006602169.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g33990-like isoform X3 [Glycine max]
gi|571544157|ref|XP_006602170.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g33990-like isoform X4 [Glycine max]
gi|571544163|ref|XP_006602171.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g33990-like isoform X5 [Glycine max]
Length = 824
Score = 66.2 bits (160), Expect = 7e-09
Identities = 55/162 (33%), Positives = 76/162 (46%), Gaps = 17/162 (10%)
Frame = -3
Query: 435 DVFVSNALTNMLPDF----DLQKWYLMLRL*GFNITDLVNCCRREKCY--------AR*S 292
DVFVSNAL NM F D Q+ + G + DLV+ Y A
Sbjct: 282 DVFVSNALINMYSKFGRLQDAQRVF-----DGMEVRDLVSWNSIIAAYEQNDDPVTALGF 336
Query: 291 LKVLSGDDVKGDST*PAALVSFYASSFARTIKFLFGRSFHGFI-----LEVDVTLGNTVV 127
K + ++ D +L S + R I GR+ HGF+ LEVD+ +GN +V
Sbjct: 337 FKEMLFVGMRPDLLTVVSLASIFGQLSDRRI----GRAVHGFVVRCRWLEVDIVIGNALV 392
Query: 126 DMYANLGFCDCTHEAIEEVHLKDVVL*NGVTTSNAQDGLARE 1
+MYA LG DC E++ +DV+ N + T AQ+GLA E
Sbjct: 393 NMYAKLGSIDCARAVFEQLPSRDVISWNTLITGYAQNGLASE 434
>gb|EMJ00195.1| hypothetical protein PRUPE_ppa002176mg [Prunus persica]
Length = 705
Score = 53.1 bits (126), Expect(2) = 1e-08
Identities = 34/79 (43%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Frame = -3
Query: 222 ASSFARTIKFLFGRSFHGFILE-----VDVTLGNTVVDMYANLGFCDCTHEAIEEVHLKD 58
AS A+ RS HGFIL DV +GN VVDMYA LG E + +KD
Sbjct: 237 ASILAQLSDAAKSRSVHGFILRRDFFVQDVVIGNAVVDMYAKLGAIYSARTVFEGLPIKD 296
Query: 57 VVL*NGVTTSNAQDGLARE 1
V+ N + T AQ+GLA E
Sbjct: 297 VISWNTLITGYAQNGLASE 315
Score = 32.3 bits (72), Expect(2) = 1e-08
Identities = 18/37 (48%), Positives = 22/37 (59%)
Frame = -1
Query: 356 KDLISRTLLIAADEKNVMPDKALKYFQEMTSKGIQPD 246
+DL+S +IAA E+N P AL F M GIQPD
Sbjct: 193 RDLVSWNSIIAAYEQNDDPMTALGLFYSMQLLGIQPD 229
>ref|XP_006487111.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Citrus sinensis]
Length = 820
Score = 55.1 bits (131), Expect(3) = 1e-08
Identities = 30/66 (45%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Frame = -3
Query: 183 RSFHGFILE-----VDVTLGNTVVDMYANLGFCDCTHEAIEEVHLKDVVL*NGVTTSNAQ 19
R+ HGFI+ DV +GN VVDMYA LG + H E + +KDV+ N + T AQ
Sbjct: 365 RAVHGFIMRRGWFMEDVIIGNAVVDMYAKLGVINSAHAVFEGLPVKDVISWNTLITGYAQ 424
Query: 18 DGLARE 1
+GLA E
Sbjct: 425 NGLASE 430
Score = 28.9 bits (63), Expect(3) = 1e-08
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = -1
Query: 356 KDLISRTLLIAADEKNVMPDKALKYFQEMTSKGIQPD 246
+D++S +IAA E++ P A +F M GIQPD
Sbjct: 308 RDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPD 344
Score = 20.4 bits (41), Expect(3) = 1e-08
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -2
Query: 484 LQIHFYVIKH 455
L IH Y+IKH
Sbjct: 264 LLIHLYIIKH 273
>ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 64.3 bits (155), Expect(2) = 1e-08
Identities = 57/159 (35%), Positives = 76/159 (47%), Gaps = 14/159 (8%)
Frame = -3
Query: 435 DVFVSNALTNMLPDF----DLQKWYLMLRL*GFNITDLVNCCRREKCYAR*SLKVLSGD- 271
D+FVSNAL NM F D +K + + ITD+V+ Y + V +
Sbjct: 350 DLFVSNALINMYAKFGNLEDARKAFQQMF-----ITDVVSWNSIIAAYEQNDDPVTAHGF 404
Query: 270 ----DVKGDST*PAALVSFYASSFARTIKFLFGRSFHGFILE-----VDVTLGNTVVDMY 118
+ G LVS AS A++ RS HGFI+ DV +GN VVDMY
Sbjct: 405 FVKMQLNGFQPDLLTLVSL-ASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMY 463
Query: 117 ANLGFCDCTHEAIEEVHLKDVVL*NGVTTSNAQDGLARE 1
A LG D H+ E + +KDV+ N + T AQ+GLA E
Sbjct: 464 AKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASE 502
Score = 20.8 bits (42), Expect(2) = 1e-08
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 496 IHARLQIHFYVIKH 455
I + IH YVIKH
Sbjct: 332 ISTAMLIHLYVIKH 345
>emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 63.9 bits (154), Expect(2) = 2e-08
Identities = 57/159 (35%), Positives = 76/159 (47%), Gaps = 14/159 (8%)
Frame = -3
Query: 435 DVFVSNALTNMLPDF----DLQKWYLMLRL*GFNITDLVNCCRREKCYAR*SLKVLSGD- 271
D+FVSNAL NM F D +K + + ITD+V+ Y + V +
Sbjct: 350 DLFVSNALINMYAKFGNLEDARKAFQQMF-----ITDVVSWNSIIAAYEQNDDPVTAHGF 404
Query: 270 ----DVKGDST*PAALVSFYASSFARTIKFLFGRSFHGFILE-----VDVTLGNTVVDMY 118
+ G LVS AS A++ RS HGFI+ DV +GN VVDMY
Sbjct: 405 FVKMQLNGFQPDLLTLVSL-ASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMY 463
Query: 117 ANLGFCDCTHEAIEEVHLKDVVL*NGVTTSNAQDGLARE 1
A LG D H+ E + +KDV+ N + T AQ+GLA E
Sbjct: 464 AKLGLLDSAHKVFEIILVKDVISWNTLITGYAQNGLASE 502
Score = 20.8 bits (42), Expect(2) = 2e-08
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 496 IHARLQIHFYVIKH 455
I + IH YVIKH
Sbjct: 332 ISTAMLIHLYVIKH 345
>ref|XP_006400719.1| hypothetical protein EUTSA_v10012749mg [Eutrema salsugineum]
gi|557101809|gb|ESQ42172.1| hypothetical protein
EUTSA_v10012749mg [Eutrema salsugineum]
Length = 766
Score = 49.3 bits (116), Expect(2) = 1e-07
Identities = 31/79 (39%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Frame = -3
Query: 222 ASSFARTIKFLFGRSFHGFILEV-----DVTLGNTVVDMYANLGFCDCTHEAIEEVHLKD 58
AS A+ RS GF L D+T+GNTVVDMYA LG D + KD
Sbjct: 297 ASILAQLGDIRASRSVQGFTLRKGWFLEDITIGNTVVDMYAKLGLVDSARAVFNWLPSKD 356
Query: 57 VVL*NGVTTSNAQDGLARE 1
V+ N + + AQ+G A E
Sbjct: 357 VISWNTIISGYAQNGYASE 375
Score = 32.3 bits (72), Expect(2) = 1e-07
Identities = 18/37 (48%), Positives = 22/37 (59%)
Frame = -1
Query: 356 KDLISRTLLIAADEKNVMPDKALKYFQEMTSKGIQPD 246
+DLIS +I A E N P +AL F+EM IQPD
Sbjct: 253 RDLISWNSMIKAYELNEQPLRALWLFEEMRLNRIQPD 289
>ref|XP_006400718.1| hypothetical protein EUTSA_v10012749mg [Eutrema salsugineum]
gi|557101808|gb|ESQ42171.1| hypothetical protein
EUTSA_v10012749mg [Eutrema salsugineum]
Length = 683
Score = 49.3 bits (116), Expect(2) = 1e-07
Identities = 31/79 (39%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Frame = -3
Query: 222 ASSFARTIKFLFGRSFHGFILEV-----DVTLGNTVVDMYANLGFCDCTHEAIEEVHLKD 58
AS A+ RS GF L D+T+GNTVVDMYA LG D + KD
Sbjct: 214 ASILAQLGDIRASRSVQGFTLRKGWFLEDITIGNTVVDMYAKLGLVDSARAVFNWLPSKD 273
Query: 57 VVL*NGVTTSNAQDGLARE 1
V+ N + + AQ+G A E
Sbjct: 274 VISWNTIISGYAQNGYASE 292
Score = 32.3 bits (72), Expect(2) = 1e-07
Identities = 18/37 (48%), Positives = 22/37 (59%)
Frame = -1
Query: 356 KDLISRTLLIAADEKNVMPDKALKYFQEMTSKGIQPD 246
+DLIS +I A E N P +AL F+EM IQPD
Sbjct: 170 RDLISWNSMIKAYELNEQPLRALWLFEEMRLNRIQPD 206
>ref|XP_002518758.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223542139|gb|EEF43683.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 379
Score = 51.6 bits (122), Expect(2) = 2e-07
Identities = 28/66 (42%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Frame = -3
Query: 183 RSFHGFILE-----VDVTLGNTVVDMYANLGFCDCTHEAIEEVHLKDVVL*NGVTTSNAQ 19
RS HGF+ D +GN VVDMYA LG + E + +KDV+ N + T AQ
Sbjct: 179 RSIHGFVTRRGWFMKDTVIGNAVVDMYAKLGATESARAVFERLPVKDVISWNTLITGYAQ 238
Query: 18 DGLARE 1
+GLA E
Sbjct: 239 NGLASE 244
Score = 30.0 bits (66), Expect(2) = 2e-07
Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 6/113 (5%)
Frame = -1
Query: 566 MEHMRLEGLLQ----FATVVPVCA*LGDTCKAAN-SLLCYKA*LYLDDLTSLCQMP*QIC 402
++ MR +G+ A+++PVCA L D LL K L D S +
Sbjct: 46 VDEMRKDGVAMDAFAVASILPVCAKLNDVLSGKLIHLLVIKLGLEFDSFVSNALIAMYAK 105
Query: 401 YQIL-ICRNGT*CYGCKDLISRTLLIAADEKNVMPDKALKYFQEMTSKGIQPD 246
+ L + + +D++S +IAA E+N A +F +M G++PD
Sbjct: 106 FGSLGLAQKVFDHMVVRDIVSWNSIIAAYEQNDDAATARSFFDKMRQIGVRPD 158
>ref|XP_006423015.1| hypothetical protein CICLE_v10027922mg [Citrus clementina]
gi|557524949|gb|ESR36255.1| hypothetical protein
CICLE_v10027922mg [Citrus clementina]
Length = 705
Score = 52.4 bits (124), Expect(2) = 2e-07
Identities = 30/66 (45%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Frame = -3
Query: 183 RSFHGFILE-----VDVTLGNTVVDMYANLGFCDCTHEAIEEVHLKDVVL*NGVTTSNAQ 19
RS HGFI+ DV +GN VVDMYA LG + E + +KDV+ N + T AQ
Sbjct: 250 RSVHGFIMRRDWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQ 309
Query: 18 DGLARE 1
+GLA E
Sbjct: 310 NGLASE 315
Score = 28.9 bits (63), Expect(2) = 2e-07
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = -1
Query: 356 KDLISRTLLIAADEKNVMPDKALKYFQEMTSKGIQPD 246
+D++S +IAA E++ P A +F M GIQPD
Sbjct: 193 RDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPD 229
>ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 61.2 bits (147), Expect = 2e-07
Identities = 33/79 (41%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Frame = -3
Query: 222 ASSFARTIKFLFGRSFHGFILEV-----DVTLGNTVVDMYANLGFCDCTHEAIEEVHLKD 58
AS A FL RS HGF+ D+ LGN ++DMYA LGF D + E + +KD
Sbjct: 348 ASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKD 407
Query: 57 VVL*NGVTTSNAQDGLARE 1
V+ N + T +Q+GLA E
Sbjct: 408 VISWNSLITGYSQNGLANE 426
>gb|ESW18386.1| hypothetical protein PHAVU_006G036400g [Phaseolus vulgaris]
Length = 816
Score = 59.7 bits (143), Expect = 6e-07
Identities = 51/162 (31%), Positives = 73/162 (45%), Gaps = 17/162 (10%)
Frame = -3
Query: 435 DVFVSNALTNMLPDF----DLQKWYLMLRL*GFNITDLVNCCRREKCYAR*S-------- 292
DVFV NAL N+ F D Q+ + G + D+V+ Y +
Sbjct: 274 DVFVCNALINLYSKFGRLQDAQRVFD-----GMKVRDVVSWNSIIAAYEQNDDPVTALGF 328
Query: 291 LKVLSGDDVKGDST*PAALVSFYASSFARTIKFLFGRSFHGFI-----LEVDVTLGNTVV 127
K + + D +L S + R I GR+ HGF+ LE DV +GN +V
Sbjct: 329 FKRMQFVGMGPDLLTVVSLTSIFVQLSDRRI----GRAVHGFVMRRGWLEEDVVIGNALV 384
Query: 126 DMYANLGFCDCTHEAIEEVHLKDVVL*NGVTTSNAQDGLARE 1
+MYA LG DC E++ +DV+ N + T AQ+GLA E
Sbjct: 385 NMYAKLGLIDCARAVFEQLPRRDVISWNTLITGYAQNGLASE 426
>ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499957|gb|AES81160.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 1092
Score = 59.7 bits (143), Expect = 6e-07
Identities = 50/156 (32%), Positives = 74/156 (47%), Gaps = 11/156 (7%)
Frame = -3
Query: 435 DVFVSNALTNMLPDFD-LQKWYLMLRL*GFNITDLVNCCRREKCYAR*S-----LKVLSG 274
DVFVSNAL NM F LQ ++ + DLV+ Y + + L+ G
Sbjct: 256 DVFVSNALINMYSKFGRLQDAQMVFDQ--MEVRDLVSWNSIIAAYEQNNDPSTALRFFKG 313
Query: 273 DDVKGDST*PAALVSFYASSFARTIKFLFGRSFHGFI-----LEVDVTLGNTVVDMYANL 109
+ G +VS S F++ RS GF+ L+ DV +GN +V+MYA L
Sbjct: 314 MQLGGIRPDLLTVVSL-TSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKL 372
Query: 108 GFCDCTHEAIEEVHLKDVVL*NGVTTSNAQDGLARE 1
G+ +C H +++ KD + N + T Q+GLA E
Sbjct: 373 GYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASE 408
>gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 59.7 bits (143), Expect = 6e-07
Identities = 50/156 (32%), Positives = 74/156 (47%), Gaps = 11/156 (7%)
Frame = -3
Query: 435 DVFVSNALTNMLPDFD-LQKWYLMLRL*GFNITDLVNCCRREKCYAR*S-----LKVLSG 274
DVFVSNAL NM F LQ ++ + DLV+ Y + + L+ G
Sbjct: 256 DVFVSNALINMYSKFGRLQDAQMVFDQ--MEVRDLVSWNSIIAAYEQNNDPSTALRFFKG 313
Query: 273 DDVKGDST*PAALVSFYASSFARTIKFLFGRSFHGFI-----LEVDVTLGNTVVDMYANL 109
+ G +VS S F++ RS GF+ L+ DV +GN +V+MYA L
Sbjct: 314 MQLGGIRPDLLTVVSL-TSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKL 372
Query: 108 GFCDCTHEAIEEVHLKDVVL*NGVTTSNAQDGLARE 1
G+ +C H +++ KD + N + T Q+GLA E
Sbjct: 373 GYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASE 408
>ref|XP_002300569.2| hypothetical protein POPTR_0001s47030g, partial [Populus
trichocarpa] gi|550350056|gb|EEE85374.2| hypothetical
protein POPTR_0001s47030g, partial [Populus trichocarpa]
Length = 751
Score = 47.8 bits (112), Expect(2) = 1e-06
Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Frame = -3
Query: 183 RSFHGFILEVD-----VTLGNTVVDMYANLGFCDCTHEAIEEVHLKDVVL*NGVTTSNAQ 19
RS HGF++ + +GN VVDMYA +G D + +KDVV N + T AQ
Sbjct: 320 RSVHGFVMRKGWFMEYIIIGNAVVDMYAKIGNLDSARAVFGGLLIKDVVSWNTLITGYAQ 379
Query: 18 DGLARE 1
+GLA E
Sbjct: 380 NGLASE 385
Score = 30.8 bits (68), Expect(2) = 1e-06
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 8/114 (7%)
Frame = -1
Query: 563 EHMRLEGL----LQFATVVPVCA*LGDTCKAAN-SLLCYKA*LYLDDLTSLCQMP*QICY 399
+ MRLEG+ + A+V+PVCA +GD L K L + S + +
Sbjct: 188 DEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYVIKHGLEFELFVSNALINMYAKF 247
Query: 398 QILICRNGT*CYG---CKDLISRTLLIAADEKNVMPDKALKYFQEMTSKGIQPD 246
L + +G +D++S +IAA E+N P A +F +M +QPD
Sbjct: 248 GSL--GHAQKVFGQMVVRDIVSWNSIIAAYEQNNNPVSAHLFFHKMQEARVQPD 299
>ref|XP_006283127.1| hypothetical protein CARUB_v10004150mg [Capsella rubella]
gi|482551832|gb|EOA16025.1| hypothetical protein
CARUB_v10004150mg [Capsella rubella]
Length = 814
Score = 43.1 bits (100), Expect(2) = 2e-06
Identities = 24/57 (42%), Positives = 32/57 (56%)
Frame = -3
Query: 171 GFILEVDVTLGNTVVDMYANLGFCDCTHEAIEEVHLKDVVL*NGVTTSNAQDGLARE 1
G+ LE D+T+GN VV MYA LG D + KDV+ N + + AQ+G A E
Sbjct: 368 GWFLE-DITIGNAVVVMYAKLGLVDLARAVFNWLPNKDVISWNTIISGYAQNGFASE 423
Score = 34.7 bits (78), Expect(2) = 2e-06
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = -1
Query: 356 KDLISRTLLIAADEKNVMPDKALKYFQEMTSKGIQPD 246
+DLIS +I A E N P +AL FQEM IQPD
Sbjct: 301 RDLISWNSIIKAYELNEQPLRALSLFQEMRFSRIQPD 337