BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00007816
         (563 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006346784.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   318   8e-85
ref|NP_001266205.1| RNA-dependent RNA polymerase 6 [Solanum lyco...   311   5e-83
gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]   306   2e-81
gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]     306   3e-81
gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]     305   4e-81
dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]    304   1e-80
gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicot...   302   3e-80
emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]    298   8e-79
ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populu...   271   8e-71
gb|EXB88201.1| RNA-dependent RNA polymerase 6 [Morus notabilis]       268   9e-70
gb|EMJ26639.1| hypothetical protein PRUPE_ppa000422mg [Prunus pe...   265   8e-69
ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Rici...   264   1e-68
ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populu...   262   4e-68
gb|ADG57590.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutu...   258   5e-67
ref|XP_004291459.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   258   7e-67
gb|EOY29490.1| RNA-dependent RNA polymerase 6 [Theobroma cacao]       257   2e-66
ref|XP_003603409.1| Rna-dependent RNA polymerase [Medicago trunc...   254   1e-65
ref|XP_006483358.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   253   2e-65
ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   253   2e-65
ref|XP_004501325.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   253   2e-65

>ref|XP_006346784.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Solanum
            tuberosum] gi|565360032|ref|XP_006346785.1| PREDICTED:
            RNA-dependent RNA polymerase 6-like isoform X2 [Solanum
            tuberosum]
          Length = 1198

 Score =  318 bits (814), Expect = 8e-85
 Identities = 155/181 (85%), Positives = 164/181 (90%)
 Frame = -3

Query: 543  LSFSANQLRDRSAWFFAEESEIRVPNIINWMGKFSNRNVAKCAASMEQCFSSTRATMEVL 364
            L+FSANQLRDRSAWFFAE  EIRVPNIINWMGKF NRNVAKCAA M QCFSST AT+EVL
Sbjct: 510  LAFSANQLRDRSAWFFAEAPEIRVPNIINWMGKFGNRNVAKCAARMGQCFSSTYATVEVL 569

Query: 363  PSEVNSELSDIDRNGYVFSDGIGMMSADLAIEVAEKLQLSVNPCCAYQIWYAGCKGVVVC 184
            PSEVNSEL DI+RNGYVFSDGIGMMSADL+IEVA KLQLSVNP CAYQI YAGCKGVV C
Sbjct: 570  PSEVNSELPDIERNGYVFSDGIGMMSADLSIEVAAKLQLSVNPPCAYQIRYAGCKGVVAC 629

Query: 183  WTAKNDDIRLSLRPNMKKFDSKHTILEICSWTRLQPGFQNRQIVTLFSSLDVKDEIFWEM 4
            W A+ D IRLSLRP+MKKFDS HTILEICSWTRLQPGF NRQI+TL SSL+VKDE+FWEM
Sbjct: 630  WPAEKDGIRLSLRPSMKKFDSNHTILEICSWTRLQPGFLNRQIITLLSSLEVKDEMFWEM 689

Query: 3    Q 1
            Q
Sbjct: 690  Q 690


>ref|NP_001266205.1| RNA-dependent RNA polymerase 6 [Solanum lycopersicum]
            gi|397529811|gb|AFO53516.1| RNA-dependent RNA polymerase
            6 [Solanum lycopersicum]
          Length = 1197

 Score =  311 bits (798), Expect = 5e-83
 Identities = 152/181 (83%), Positives = 163/181 (90%)
 Frame = -3

Query: 543  LSFSANQLRDRSAWFFAEESEIRVPNIINWMGKFSNRNVAKCAASMEQCFSSTRATMEVL 364
            L+FSANQLRDRSAWFFAE  EIRV +IINWMGKF NRNVAKCAA M QCFSST AT+EVL
Sbjct: 509  LAFSANQLRDRSAWFFAETPEIRVTSIINWMGKFGNRNVAKCAARMGQCFSSTYATVEVL 568

Query: 363  PSEVNSELSDIDRNGYVFSDGIGMMSADLAIEVAEKLQLSVNPCCAYQIWYAGCKGVVVC 184
            PSEVNSEL DI+RNGYVFSDGIGMM+ADL+IEVA KLQLSVNP CAYQI YAGCKGVV C
Sbjct: 569  PSEVNSELPDIERNGYVFSDGIGMMTADLSIEVAAKLQLSVNPPCAYQIRYAGCKGVVAC 628

Query: 183  WTAKNDDIRLSLRPNMKKFDSKHTILEICSWTRLQPGFQNRQIVTLFSSLDVKDEIFWEM 4
            W A+ D IRLSLRP+MKKFDS HTILEICSWTRLQPGF NRQI+TL SSL+VKDE+FWEM
Sbjct: 629  WPAEKDGIRLSLRPSMKKFDSNHTILEICSWTRLQPGFLNRQIITLLSSLEVKDEMFWEM 688

Query: 3    Q 1
            Q
Sbjct: 689  Q 689


>gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]
          Length = 1197

 Score =  306 bits (784), Expect = 2e-81
 Identities = 152/185 (82%), Positives = 161/185 (87%)
 Frame = -3

Query: 555  KVLLLSFSANQLRDRSAWFFAEESEIRVPNIINWMGKFSNRNVAKCAASMEQCFSSTRAT 376
            K   L+FSANQLRDRSAWFFAE+ +IRVP II+WMG+FSNRNVAKCAA M QCFSST AT
Sbjct: 505  KYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWMGRFSNRNVAKCAARMGQCFSSTYAT 564

Query: 375  MEVLPSEVNSELSDIDRNGYVFSDGIGMMSADLAIEVAEKLQLSVNPCCAYQIWYAGCKG 196
            +EV  SEVNSEL DI+RNGYVFSDGIGM+SADLAIEVAEKL LSVNP  AYQI YAGCKG
Sbjct: 565  VEVPSSEVNSELPDIERNGYVFSDGIGMISADLAIEVAEKLHLSVNPPAAYQIRYAGCKG 624

Query: 195  VVVCWTAKNDDIRLSLRPNMKKFDSKHTILEICSWTRLQPGFQNRQIVTLFSSLDVKDEI 16
            VV CW  KND IRLSLRP+MKKFDS HTILEICSWTR QPGF NRQIVTL SSLDVKD I
Sbjct: 625  VVACWPTKNDGIRLSLRPSMKKFDSNHTILEICSWTRFQPGFLNRQIVTLLSSLDVKDGI 684

Query: 15   FWEMQ 1
            FWEMQ
Sbjct: 685  FWEMQ 689


>gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score =  306 bits (783), Expect = 3e-81
 Identities = 152/185 (82%), Positives = 161/185 (87%)
 Frame = -3

Query: 555  KVLLLSFSANQLRDRSAWFFAEESEIRVPNIINWMGKFSNRNVAKCAASMEQCFSSTRAT 376
            K   L+FSANQLRDRSAWFFAE+ +IRVP II+WMG+FSNRNVAKCAA M QCFSST AT
Sbjct: 505  KYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWMGRFSNRNVAKCAARMGQCFSSTYAT 564

Query: 375  MEVLPSEVNSELSDIDRNGYVFSDGIGMMSADLAIEVAEKLQLSVNPCCAYQIWYAGCKG 196
            +EV  SEVNSEL DI+RNGYVFSDGIGM+SADLAIEVAEKL LSVNP  AYQI YAGCKG
Sbjct: 565  VEVPSSEVNSELPDIERNGYVFSDGIGMISADLAIEVAEKLHLSVNPPSAYQIRYAGCKG 624

Query: 195  VVVCWTAKNDDIRLSLRPNMKKFDSKHTILEICSWTRLQPGFQNRQIVTLFSSLDVKDEI 16
            VV CW  KND IRLSLRP+MKKFDS HTILEICSWTR QPGF NRQIVTL SSLDVKD I
Sbjct: 625  VVACWPTKNDGIRLSLRPSMKKFDSNHTILEICSWTRFQPGFLNRQIVTLLSSLDVKDGI 684

Query: 15   FWEMQ 1
            FWEMQ
Sbjct: 685  FWEMQ 689


>gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]
          Length = 1197

 Score =  305 bits (782), Expect = 4e-81
 Identities = 151/185 (81%), Positives = 161/185 (87%)
 Frame = -3

Query: 555  KVLLLSFSANQLRDRSAWFFAEESEIRVPNIINWMGKFSNRNVAKCAASMEQCFSSTRAT 376
            K   L+FSANQLRDRSAWFFAE+ +IRVP II+WMG+FSNRNVAKCAA M QCFSST AT
Sbjct: 505  KYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWMGRFSNRNVAKCAARMGQCFSSTYAT 564

Query: 375  MEVLPSEVNSELSDIDRNGYVFSDGIGMMSADLAIEVAEKLQLSVNPCCAYQIWYAGCKG 196
            +EV  SEVNSEL DI+RNGYVFSDGIGM+SADLA+EVAEKL LSVNP  AYQI YAGCKG
Sbjct: 565  VEVPSSEVNSELPDIERNGYVFSDGIGMISADLAVEVAEKLHLSVNPPSAYQIRYAGCKG 624

Query: 195  VVVCWTAKNDDIRLSLRPNMKKFDSKHTILEICSWTRLQPGFQNRQIVTLFSSLDVKDEI 16
            VV CW  KND IRLSLRP+MKKFDS HTILEICSWTR QPGF NRQIVTL SSLDVKD I
Sbjct: 625  VVACWPTKNDGIRLSLRPSMKKFDSNHTILEICSWTRFQPGFLNRQIVTLLSSLDVKDGI 684

Query: 15   FWEMQ 1
            FWEMQ
Sbjct: 685  FWEMQ 689


>dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score =  304 bits (778), Expect = 1e-80
 Identities = 151/185 (81%), Positives = 160/185 (86%)
 Frame = -3

Query: 555  KVLLLSFSANQLRDRSAWFFAEESEIRVPNIINWMGKFSNRNVAKCAASMEQCFSSTRAT 376
            K   L+FSANQLRDRSAWFFAE+ +IRVP II+WMG+FSNRNVAKCAA M QCFSST AT
Sbjct: 505  KYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWMGRFSNRNVAKCAARMGQCFSSTYAT 564

Query: 375  MEVLPSEVNSELSDIDRNGYVFSDGIGMMSADLAIEVAEKLQLSVNPCCAYQIWYAGCKG 196
            +EV   EVNSEL DI+RNGYVFSDGIGM+SADLAIEVAEKL LSVNP  AYQI YAGCKG
Sbjct: 565  VEVPSREVNSELPDIERNGYVFSDGIGMISADLAIEVAEKLHLSVNPPSAYQIRYAGCKG 624

Query: 195  VVVCWTAKNDDIRLSLRPNMKKFDSKHTILEICSWTRLQPGFQNRQIVTLFSSLDVKDEI 16
            VV CW  KND IRLSLRP+MKKFDS HTILEICSWTR QPGF NRQIVTL SSLDVKD I
Sbjct: 625  VVACWPTKNDGIRLSLRPSMKKFDSNHTILEICSWTRFQPGFLNRQIVTLLSSLDVKDGI 684

Query: 15   FWEMQ 1
            FWEMQ
Sbjct: 685  FWEMQ 689


>gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicotiana benthamiana]
          Length = 1197

 Score =  302 bits (774), Expect = 3e-80
 Identities = 150/185 (81%), Positives = 160/185 (86%)
 Frame = -3

Query: 555  KVLLLSFSANQLRDRSAWFFAEESEIRVPNIINWMGKFSNRNVAKCAASMEQCFSSTRAT 376
            K   L+FSANQLRDRSAWFFAE+ +IRVP II+WMG+FSNRNVAKCAA M QCFSST AT
Sbjct: 505  KYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWMGRFSNRNVAKCAARMGQCFSSTYAT 564

Query: 375  MEVLPSEVNSELSDIDRNGYVFSDGIGMMSADLAIEVAEKLQLSVNPCCAYQIWYAGCKG 196
            +EV  SEVNSEL DI+RNGYVFSDGIGM+SADLA+EVAEKL LSVNP  AYQI YAGCKG
Sbjct: 565  VEVPSSEVNSELPDIERNGYVFSDGIGMISADLALEVAEKLHLSVNPPSAYQIRYAGCKG 624

Query: 195  VVVCWTAKNDDIRLSLRPNMKKFDSKHTILEICSWTRLQPGFQNRQIVTLFSSLDVKDEI 16
            VV CW  KND I LSLRP+MKKFDS HTILEICSWTR QPGF NRQIVTL SSLDVKD I
Sbjct: 625  VVACWPTKNDGILLSLRPSMKKFDSNHTILEICSWTRFQPGFLNRQIVTLLSSLDVKDGI 684

Query: 15   FWEMQ 1
            FWEMQ
Sbjct: 685  FWEMQ 689


>emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score =  298 bits (762), Expect = 8e-79
 Identities = 149/185 (80%), Positives = 159/185 (85%)
 Frame = -3

Query: 555  KVLLLSFSANQLRDRSAWFFAEESEIRVPNIINWMGKFSNRNVAKCAASMEQCFSSTRAT 376
            K   L+FSANQLRDRSAWFFAE+ +IRVP II+WMG+FSNRNVAKCAA M QCFSST AT
Sbjct: 505  KYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWMGRFSNRNVAKCAARMGQCFSSTYAT 564

Query: 375  MEVLPSEVNSELSDIDRNGYVFSDGIGMMSADLAIEVAEKLQLSVNPCCAYQIWYAGCKG 196
            +EV  SEVNSEL DI+RNGYVFSDGIGM+SADLAIEVAEKL L+VNP  AYQI YAG KG
Sbjct: 565  VEVPSSEVNSELPDIERNGYVFSDGIGMISADLAIEVAEKLHLNVNPPSAYQIRYAGYKG 624

Query: 195  VVVCWTAKNDDIRLSLRPNMKKFDSKHTILEICSWTRLQPGFQNRQIVTLFSSLDVKDEI 16
            VV CW  KND I LSLRP+MKKFDS HTILEICSWTR QPGF NRQIVTL SSLDVKD I
Sbjct: 625  VVACWPTKNDGILLSLRPSMKKFDSNHTILEICSWTRFQPGFLNRQIVTLLSSLDVKDGI 684

Query: 15   FWEMQ 1
            FWEMQ
Sbjct: 685  FWEMQ 689


>ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
            gi|222865729|gb|EEF02860.1| SILENCING DEFECTIVE 1 family
            protein [Populus trichocarpa]
          Length = 1200

 Score =  271 bits (693), Expect = 8e-71
 Identities = 127/181 (70%), Positives = 151/181 (83%)
 Frame = -3

Query: 543  LSFSANQLRDRSAWFFAEESEIRVPNIINWMGKFSNRNVAKCAASMEQCFSSTRATMEVL 364
            L+FSANQLRD+SAWFF+EE  I V ++ +WMGKF+NRN+AKCAA M QCFSST AT+EV 
Sbjct: 512  LAFSANQLRDQSAWFFSEERNISVLDVKSWMGKFTNRNIAKCAARMGQCFSSTYATIEVP 571

Query: 363  PSEVNSELSDIDRNGYVFSDGIGMMSADLAIEVAEKLQLSVNPCCAYQIWYAGCKGVVVC 184
            P EVNS+L DI+RNGYVFSDGIG+++ DLA EVAEKL+L ++P CAYQI YAGCKGVV C
Sbjct: 572  PEEVNSDLPDIERNGYVFSDGIGIITPDLAREVAEKLKLDIDPPCAYQIRYAGCKGVVAC 631

Query: 183  WTAKNDDIRLSLRPNMKKFDSKHTILEICSWTRLQPGFQNRQIVTLFSSLDVKDEIFWEM 4
            W  K D +RLSLRP+M KF S HT LEICSWTR QPGF NRQI+TL S+L+V D +FW+M
Sbjct: 632  WPGKGDGVRLSLRPSMNKFQSNHTTLEICSWTRFQPGFLNRQIITLLSTLNVPDAVFWKM 691

Query: 3    Q 1
            Q
Sbjct: 692  Q 692


>gb|EXB88201.1| RNA-dependent RNA polymerase 6 [Morus notabilis]
          Length = 1194

 Score =  268 bits (684), Expect = 9e-70
 Identities = 130/181 (71%), Positives = 151/181 (83%)
 Frame = -3

Query: 543  LSFSANQLRDRSAWFFAEESEIRVPNIINWMGKFSNRNVAKCAASMEQCFSSTRATMEVL 364
            L+FS+NQLRDRSAWFFAE+ +I V  I  WMG+F+NRN+AKCAA M QCFSST AT+EV 
Sbjct: 505  LAFSSNQLRDRSAWFFAEDGKITVNGIKKWMGRFNNRNIAKCAARMGQCFSSTYATVEVP 564

Query: 363  PSEVNSELSDIDRNGYVFSDGIGMMSADLAIEVAEKLQLSVNPCCAYQIWYAGCKGVVVC 184
             +EVN +L +I+RN YVFSDGIGM++ DLA EVAEKL+L +NP  AYQI YAGCKGVV C
Sbjct: 565  LTEVNFDLEEIERNTYVFSDGIGMITPDLAKEVAEKLKLDINPPSAYQIRYAGCKGVVAC 624

Query: 183  WTAKNDDIRLSLRPNMKKFDSKHTILEICSWTRLQPGFQNRQIVTLFSSLDVKDEIFWEM 4
            W  K D IRLSLR +M KFDSKHTILEICSWTR QPGF NRQIVTL S+L+V+DEIFW+M
Sbjct: 625  WPPKGDGIRLSLRRSMNKFDSKHTILEICSWTRFQPGFLNRQIVTLLSTLNVRDEIFWKM 684

Query: 3    Q 1
            Q
Sbjct: 685  Q 685


>gb|EMJ26639.1| hypothetical protein PRUPE_ppa000422mg [Prunus persica]
          Length = 1196

 Score =  265 bits (676), Expect = 8e-69
 Identities = 130/185 (70%), Positives = 150/185 (81%)
 Frame = -3

Query: 555  KVLLLSFSANQLRDRSAWFFAEESEIRVPNIINWMGKFSNRNVAKCAASMEQCFSSTRAT 376
            K   L+FS+NQLRDRSAWFFAE   I V  I +WMGKF+N+NVAKCAA M QCFSST AT
Sbjct: 504  KYTFLAFSSNQLRDRSAWFFAECVNISVGKITSWMGKFNNKNVAKCAARMGQCFSSTYAT 563

Query: 375  MEVLPSEVNSELSDIDRNGYVFSDGIGMMSADLAIEVAEKLQLSVNPCCAYQIWYAGCKG 196
            +EV  SEVN ++ DI RNGYVFSDGIGM++ DLA+EVAEKL+L  NP CAYQI +AGCKG
Sbjct: 564  VEVTSSEVN-DIPDIKRNGYVFSDGIGMITPDLALEVAEKLKLDRNPPCAYQIRFAGCKG 622

Query: 195  VVVCWTAKNDDIRLSLRPNMKKFDSKHTILEICSWTRLQPGFQNRQIVTLFSSLDVKDEI 16
            VV CW +K D  RLSLR +M KF+SKHT LEICSWTR QPGF NRQI+TL S+L+V+DEI
Sbjct: 623  VVACWPSKGDGFRLSLRTSMNKFESKHTTLEICSWTRYQPGFLNRQIITLLSTLNVEDEI 682

Query: 15   FWEMQ 1
            FW MQ
Sbjct: 683  FWRMQ 687


>ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
            gi|223545464|gb|EEF46969.1| RNA-dependent RNA polymerase,
            putative [Ricinus communis]
          Length = 1203

 Score =  264 bits (675), Expect = 1e-68
 Identities = 129/185 (69%), Positives = 147/185 (79%)
 Frame = -3

Query: 555  KVLLLSFSANQLRDRSAWFFAEESEIRVPNIINWMGKFSNRNVAKCAASMEQCFSSTRAT 376
            K   L+FS+NQLRDRSAWFFAE+ +  V  I NWMGKF+NRN+AKCAA M QCFSST AT
Sbjct: 505  KYSFLAFSSNQLRDRSAWFFAEDGKTSVSKIRNWMGKFTNRNIAKCAARMGQCFSSTYAT 564

Query: 375  MEVLPSEVNSELSDIDRNGYVFSDGIGMMSADLAIEVAEKLQLSVNPCCAYQIWYAGCKG 196
            +EV  +E   +L DI+RN Y+FSDGIGM++ DLA EVAEKL+L VNP CAYQI YAGCKG
Sbjct: 565  VEVPSAEAILDLPDIERNNYIFSDGIGMITPDLAKEVAEKLKLEVNPPCAYQIRYAGCKG 624

Query: 195  VVVCWTAKNDDIRLSLRPNMKKFDSKHTILEICSWTRLQPGFQNRQIVTLFSSLDVKDEI 16
            VV CW A  D IRLSLR +M KF S HT LEICSWTR QPGF NRQI+TL S+LDV DEI
Sbjct: 625  VVACWPAHIDGIRLSLRVSMNKFHSNHTTLEICSWTRFQPGFLNRQIITLLSTLDVPDEI 684

Query: 15   FWEMQ 1
            FW+MQ
Sbjct: 685  FWKMQ 689


>ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
            gi|222854638|gb|EEE92185.1| SILENCING DEFECTIVE 1 family
            protein [Populus trichocarpa]
          Length = 1198

 Score =  262 bits (670), Expect = 4e-68
 Identities = 126/181 (69%), Positives = 146/181 (80%)
 Frame = -3

Query: 543  LSFSANQLRDRSAWFFAEESEIRVPNIINWMGKFSNRNVAKCAASMEQCFSSTRATMEVL 364
            L+FS+NQLRDRSAWFFAE+  I V  I +WMGKF+N+N+AKCAA M QCFSST AT+EV 
Sbjct: 509  LAFSSNQLRDRSAWFFAEDRNINVMAIKSWMGKFTNKNIAKCAARMGQCFSSTYATIEVP 568

Query: 363  PSEVNSELSDIDRNGYVFSDGIGMMSADLAIEVAEKLQLSVNPCCAYQIWYAGCKGVVVC 184
            P EVNS+L DI RNGY FSDGIGM++ DLA EVAEKL+   +P CAYQI YAGCKGVV C
Sbjct: 569  PEEVNSDLPDIKRNGYDFSDGIGMITPDLAREVAEKLKFDFDPPCAYQIRYAGCKGVVAC 628

Query: 183  WTAKNDDIRLSLRPNMKKFDSKHTILEICSWTRLQPGFQNRQIVTLFSSLDVKDEIFWEM 4
            W  + D IRLSLR +M KF S HTILEICSWTR QPGF NRQI+TL S+L+V D +FW+M
Sbjct: 629  WPEQGDGIRLSLRSSMNKFQSNHTILEICSWTRFQPGFLNRQIITLLSALNVPDAVFWKM 688

Query: 3    Q 1
            Q
Sbjct: 689  Q 689


>gb|ADG57590.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutum]
            gi|295885034|gb|ADG57592.1| RNA-dependent RNA polymerase
            6 [Gossypium hirsutum]
          Length = 1196

 Score =  258 bits (660), Expect = 5e-67
 Identities = 126/185 (68%), Positives = 145/185 (78%)
 Frame = -3

Query: 555  KVLLLSFSANQLRDRSAWFFAEESEIRVPNIINWMGKFSNRNVAKCAASMEQCFSSTRAT 376
            K   L+FSANQLRDR+AWFFAE+ +I V  II WMGKF+NRN+AKCAA M QCFSST AT
Sbjct: 504  KYSFLAFSANQLRDRAAWFFAEDGKINVLQIIGWMGKFTNRNIAKCAARMGQCFSSTYAT 563

Query: 375  MEVLPSEVNSELSDIDRNGYVFSDGIGMMSADLAIEVAEKLQLSVNPCCAYQIWYAGCKG 196
            +EV   +VN  L DI RNGY FSDGIG ++ DLA+EVA+KL+L +NP CAYQI YAGCKG
Sbjct: 564  VEVPSGQVNMHLPDIKRNGYDFSDGIGKITPDLAMEVAQKLKLDLNPPCAYQIRYAGCKG 623

Query: 195  VVVCWTAKNDDIRLSLRPNMKKFDSKHTILEICSWTRLQPGFQNRQIVTLFSSLDVKDEI 16
            VV CW  + D IRLSLR +M KF S HT LEICSWTR QPGF NRQI+TL S+L V DE+
Sbjct: 624  VVACWPEEGDRIRLSLRSSMIKFFSHHTTLEICSWTRFQPGFLNRQIITLLSTLGVPDEV 683

Query: 15   FWEMQ 1
            FW MQ
Sbjct: 684  FWGMQ 688


>ref|XP_004291459.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Fragaria vesca subsp.
            vesca]
          Length = 1197

 Score =  258 bits (659), Expect = 7e-67
 Identities = 126/185 (68%), Positives = 146/185 (78%)
 Frame = -3

Query: 555  KVLLLSFSANQLRDRSAWFFAEESEIRVPNIINWMGKFSNRNVAKCAASMEQCFSSTRAT 376
            K   L+FS+NQLRDRSAWFFAE+  I +  I NWMG+F+NRNVAKCAA M QCFSST AT
Sbjct: 505  KYSFLAFSSNQLRDRSAWFFAEDKTISIQGIKNWMGRFTNRNVAKCAARMGQCFSSTYAT 564

Query: 375  MEVLPSEVNSELSDIDRNGYVFSDGIGMMSADLAIEVAEKLQLSVNPCCAYQIWYAGCKG 196
            +EV  ++VN EL DI+RNGYVFSDGIG ++ DLA+EVAEKL+L  +P  AYQI Y GCKG
Sbjct: 565  VEVPSTQVNHELPDIERNGYVFSDGIGRITPDLAMEVAEKLKLDRDPPSAYQIRYGGCKG 624

Query: 195  VVVCWTAKNDDIRLSLRPNMKKFDSKHTILEICSWTRLQPGFQNRQIVTLFSSLDVKDEI 16
            VV CW +  D  RLSLR +M KF S HT LEICSWTRLQPGF NRQI+TL S+L+V DEI
Sbjct: 625  VVACWPSTGDGFRLSLRRSMNKFASDHTTLEICSWTRLQPGFLNRQIITLLSALNVPDEI 684

Query: 15   FWEMQ 1
            FW MQ
Sbjct: 685  FWTMQ 689


>gb|EOY29490.1| RNA-dependent RNA polymerase 6 [Theobroma cacao]
          Length = 1197

 Score =  257 bits (656), Expect = 2e-66
 Identities = 125/185 (67%), Positives = 145/185 (78%)
 Frame = -3

Query: 555  KVLLLSFSANQLRDRSAWFFAEESEIRVPNIINWMGKFSNRNVAKCAASMEQCFSSTRAT 376
            K   L+FSANQLRD SAWFFAE+ +  V  I+ WMGKF+NRN+AKCAA M QCFSST AT
Sbjct: 505  KYSFLAFSANQLRDSSAWFFAEDGKTSVLQILRWMGKFTNRNIAKCAARMGQCFSSTYAT 564

Query: 375  MEVLPSEVNSELSDIDRNGYVFSDGIGMMSADLAIEVAEKLQLSVNPCCAYQIWYAGCKG 196
            +EV  +EVN  L DI+RNGYVFSDGIG ++ DLA EVA+KL+L +NP CAYQI YAGCKG
Sbjct: 565  VEVPSTEVNPFLPDIERNGYVFSDGIGKITPDLAKEVAQKLKLDLNPPCAYQIRYAGCKG 624

Query: 195  VVVCWTAKNDDIRLSLRPNMKKFDSKHTILEICSWTRLQPGFQNRQIVTLFSSLDVKDEI 16
            VV CW  + D +RLSLR +M KF S HT LEICSWTR QPGF NRQI+TL S+  V DE+
Sbjct: 625  VVACWPEEGDGVRLSLRCSMNKFFSDHTTLEICSWTRFQPGFLNRQIITLLSTQYVPDEV 684

Query: 15   FWEMQ 1
            FWEMQ
Sbjct: 685  FWEMQ 689


>ref|XP_003603409.1| Rna-dependent RNA polymerase [Medicago truncatula]
            gi|355492457|gb|AES73660.1| Rna-dependent RNA polymerase
            [Medicago truncatula]
          Length = 1188

 Score =  254 bits (648), Expect = 1e-65
 Identities = 124/185 (67%), Positives = 148/185 (80%)
 Frame = -3

Query: 555  KVLLLSFSANQLRDRSAWFFAEESEIRVPNIINWMGKFSNRNVAKCAASMEQCFSSTRAT 376
            K   L+FS+NQLRDRSAWFFAE+ +I   +I NWMG+F+ +NVAKCAA M QCFSST A+
Sbjct: 492  KYSFLAFSSNQLRDRSAWFFAEDKDITCDDIRNWMGRFNQKNVAKCAARMGQCFSSTYAS 551

Query: 375  MEVLPSEVNSELSDIDRNGYVFSDGIGMMSADLAIEVAEKLQLSVNPCCAYQIWYAGCKG 196
            +EV  +EVNS L D++RN YVFSDGIG+++ DLA+EVAEKL+L   P  AYQI YAG KG
Sbjct: 552  VEVPANEVNSMLPDVERNNYVFSDGIGIITTDLAVEVAEKLKLDKAP-SAYQIRYAGFKG 610

Query: 195  VVVCWTAKNDDIRLSLRPNMKKFDSKHTILEICSWTRLQPGFQNRQIVTLFSSLDVKDEI 16
            VV CW AK D I+LSLRP+M KF S HT LEIC+WTR QPGF NRQI+TL S+LDV DEI
Sbjct: 611  VVACWPAKGDGIKLSLRPSMNKFQSTHTTLEICAWTRFQPGFLNRQIITLLSALDVPDEI 670

Query: 15   FWEMQ 1
            FW+MQ
Sbjct: 671  FWKMQ 675


>ref|XP_006483358.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X3 [Citrus
            sinensis]
          Length = 1025

 Score =  253 bits (647), Expect = 2e-65
 Identities = 123/186 (66%), Positives = 149/186 (80%), Gaps = 1/186 (0%)
 Frame = -3

Query: 555  KVLLLSFSANQLRDRSAWFFAEESEIRVPNIINWMGKFSNRNVAKCAASMEQCFSSTRAT 376
            K   L+FS++QLRD SAWFF+E+ +  V +I  WMG+F+++N+AKCAA M QCFSST AT
Sbjct: 505  KFSFLAFSSSQLRDCSAWFFSEDGKTSVLDIKKWMGRFTDKNIAKCAARMGQCFSSTYAT 564

Query: 375  MEVLPSEVNSELSDIDRNGYVFSDGIGMMSADLAIEVAEKLQLSVN-PCCAYQIWYAGCK 199
            +EV P+EV+ EL DI RNGYVFSDGIG ++ DLA+EVA+KL+L VN P CAYQI YAGCK
Sbjct: 565  VEVPPTEVDPELPDIKRNGYVFSDGIGKITPDLAMEVAQKLKLDVNPPPCAYQIRYAGCK 624

Query: 198  GVVVCWTAKNDDIRLSLRPNMKKFDSKHTILEICSWTRLQPGFQNRQIVTLFSSLDVKDE 19
            GVV CW AK D IR+SLR +M KF S HT LEICSWTR QPGF NRQI+TL S+L+V DE
Sbjct: 625  GVVACWPAKGDGIRMSLRESMNKFQSHHTTLEICSWTRFQPGFLNRQIITLLSTLNVPDE 684

Query: 18   IFWEMQ 1
            +FW MQ
Sbjct: 685  MFWSMQ 690


>ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Citrus
            sinensis] gi|568859664|ref|XP_006483357.1| PREDICTED:
            RNA-dependent RNA polymerase 6-like isoform X2 [Citrus
            sinensis]
          Length = 1197

 Score =  253 bits (647), Expect = 2e-65
 Identities = 123/186 (66%), Positives = 149/186 (80%), Gaps = 1/186 (0%)
 Frame = -3

Query: 555  KVLLLSFSANQLRDRSAWFFAEESEIRVPNIINWMGKFSNRNVAKCAASMEQCFSSTRAT 376
            K   L+FS++QLRD SAWFF+E+ +  V +I  WMG+F+++N+AKCAA M QCFSST AT
Sbjct: 505  KFSFLAFSSSQLRDCSAWFFSEDGKTSVLDIKKWMGRFTDKNIAKCAARMGQCFSSTYAT 564

Query: 375  MEVLPSEVNSELSDIDRNGYVFSDGIGMMSADLAIEVAEKLQLSVN-PCCAYQIWYAGCK 199
            +EV P+EV+ EL DI RNGYVFSDGIG ++ DLA+EVA+KL+L VN P CAYQI YAGCK
Sbjct: 565  VEVPPTEVDPELPDIKRNGYVFSDGIGKITPDLAMEVAQKLKLDVNPPPCAYQIRYAGCK 624

Query: 198  GVVVCWTAKNDDIRLSLRPNMKKFDSKHTILEICSWTRLQPGFQNRQIVTLFSSLDVKDE 19
            GVV CW AK D IR+SLR +M KF S HT LEICSWTR QPGF NRQI+TL S+L+V DE
Sbjct: 625  GVVACWPAKGDGIRMSLRESMNKFQSHHTTLEICSWTRFQPGFLNRQIITLLSTLNVPDE 684

Query: 18   IFWEMQ 1
            +FW MQ
Sbjct: 685  MFWSMQ 690


>ref|XP_004501325.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X2 [Cicer
            arietinum] gi|502132369|ref|XP_004501326.1| PREDICTED:
            RNA-dependent RNA polymerase 6-like isoform X3 [Cicer
            arietinum]
          Length = 1201

 Score =  253 bits (647), Expect = 2e-65
 Identities = 125/185 (67%), Positives = 147/185 (79%)
 Frame = -3

Query: 555  KVLLLSFSANQLRDRSAWFFAEESEIRVPNIINWMGKFSNRNVAKCAASMEQCFSSTRAT 376
            K   L+FS+NQLRDRSAWFFAE++ I   +I NWMGKF+ RNVAKCAA M QCFSST A+
Sbjct: 505  KYSFLAFSSNQLRDRSAWFFAEDNNITCDDIRNWMGKFNQRNVAKCAARMGQCFSSTYAS 564

Query: 375  MEVLPSEVNSELSDIDRNGYVFSDGIGMMSADLAIEVAEKLQLSVNPCCAYQIWYAGCKG 196
            +EV  +EVNS L+D++RN YVFSDGIG+++ DLA+EVAEKL+L   P  AYQI YAG KG
Sbjct: 565  VEVAANEVNSMLADVERNNYVFSDGIGIITNDLAVEVAEKLKLDKVP-SAYQIRYAGFKG 623

Query: 195  VVVCWTAKNDDIRLSLRPNMKKFDSKHTILEICSWTRLQPGFQNRQIVTLFSSLDVKDEI 16
            VV CW  K D IRLSLRP+M KF S HT LEIC+WTR QPGF NRQI+TL S+LDV D I
Sbjct: 624  VVACWPPKGDGIRLSLRPSMNKFQSTHTTLEICAWTRFQPGFLNRQIITLLSALDVSDGI 683

Query: 15   FWEMQ 1
            FW+MQ
Sbjct: 684  FWDMQ 688