BLASTX nr result
ID: Atropa21_contig00006023
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00006023
(654 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006347939.1| PREDICTED: poly(rC)-binding protein 4-like [... 187 3e-45
ref|XP_004229760.1| PREDICTED: poly(rC)-binding protein 4-like [... 186 4e-45
ref|XP_003552465.2| PREDICTED: poly(rC)-binding protein 4-like [... 78 3e-12
ref|XP_006587798.1| PREDICTED: KH domain-containing protein At4g... 78 3e-12
gb|ESW11688.1| hypothetical protein PHAVU_008G051300g [Phaseolus... 78 3e-12
gb|ABK93228.1| unknown [Populus trichocarpa] 78 3e-12
gb|EXB37630.1| KH domain-containing protein [Morus notabilis] 76 8e-12
ref|XP_006445391.1| hypothetical protein CICLE_v10021057mg [Citr... 76 1e-11
ref|XP_004492878.1| PREDICTED: poly(rC)-binding protein 3-like i... 75 1e-11
ref|XP_002327061.1| predicted protein [Populus trichocarpa] gi|5... 75 2e-11
ref|XP_002272998.2| PREDICTED: KH domain-containing protein At4g... 74 3e-11
emb|CBI16638.3| unnamed protein product [Vitis vinifera] 74 3e-11
ref|XP_002511610.1| conserved hypothetical protein [Ricinus comm... 74 3e-11
ref|XP_006445392.1| hypothetical protein CICLE_v10021057mg [Citr... 73 8e-11
ref|XP_004307000.1| PREDICTED: KH domain-containing protein At4g... 70 4e-10
emb|CAN83854.1| hypothetical protein VITISV_031103 [Vitis vinifera] 69 1e-09
gb|EOX96435.1| RNA-binding KH domain-containing protein isoform ... 68 3e-09
gb|ADN34230.1| hypothetical protein [Cucumis melo subsp. melo] 68 3e-09
>ref|XP_006347939.1| PREDICTED: poly(rC)-binding protein 4-like [Solanum tuberosum]
Length = 451
Score = 187 bits (474), Expect = 3e-45
Identities = 94/132 (71%), Positives = 101/132 (76%), Gaps = 13/132 (9%)
Frame = +1
Query: 1 IKVHGGKGEQKQRQIHLGGSSQQVALAKQRVDEYVYSQLMLQTGGEQLQDTVXXXXXXXX 180
IKVHGGKGEQKQRQ+HLGGS+QQVALAKQRVDEYVYSQLMLQ GGEQLQDT+
Sbjct: 320 IKVHGGKGEQKQRQVHLGGSAQQVALAKQRVDEYVYSQLMLQAGGEQLQDTMQLQQQSMQ 379
Query: 181 XXX-------------IPDISATLLPGYSHGHGLYMNSNQEAQMMTSYPQVYTPTTPQAP 321
I + SATL+PGY+HGHG+YMNSNQEA MMTSYPQVYT T PQAP
Sbjct: 380 LQQSMQLQHSMQMQQQISNTSATLMPGYNHGHGVYMNSNQEAHMMTSYPQVYTSTNPQAP 439
Query: 322 AYYGQSYPGPQM 357
AYYGQSYP PQM
Sbjct: 440 AYYGQSYPAPQM 451
>ref|XP_004229760.1| PREDICTED: poly(rC)-binding protein 4-like [Solanum lycopersicum]
Length = 444
Score = 186 bits (473), Expect = 4e-45
Identities = 93/132 (70%), Positives = 100/132 (75%), Gaps = 13/132 (9%)
Frame = +1
Query: 1 IKVHGGKGEQKQRQIHLGGSSQQVALAKQRVDEYVYSQLMLQTGGEQLQDTVXXXXXXXX 180
IKVHGGKGEQKQRQ+HLGGS+QQVALAKQRVDEYVYSQLMLQ GGEQLQDT+
Sbjct: 313 IKVHGGKGEQKQRQVHLGGSAQQVALAKQRVDEYVYSQLMLQAGGEQLQDTMQLQQQSMQ 372
Query: 181 XXX-------------IPDISATLLPGYSHGHGLYMNSNQEAQMMTSYPQVYTPTTPQAP 321
IP+ SATL+PGY+HGHG+YMNSNQEA MM SYPQVYT T PQAP
Sbjct: 373 LQQSMHLQHSMQMQQQIPNTSATLMPGYNHGHGVYMNSNQEAHMMASYPQVYTSTNPQAP 432
Query: 322 AYYGQSYPGPQM 357
YYGQSYP PQM
Sbjct: 433 GYYGQSYPAPQM 444
>ref|XP_003552465.2| PREDICTED: poly(rC)-binding protein 4-like [Glycine max]
Length = 362
Score = 77.8 bits (190), Expect = 3e-12
Identities = 37/47 (78%), Positives = 42/47 (89%)
Frame = +1
Query: 1 IKVHGGKGEQKQRQIHLGGSSQQVALAKQRVDEYVYSQLMLQTGGEQ 141
IKV+GGKGEQK RQI GGS+QQVALAKQRVDEY+YSQL+ QTG +Q
Sbjct: 311 IKVYGGKGEQKHRQIQFGGSAQQVALAKQRVDEYIYSQLIQQTGTQQ 357
>ref|XP_006587798.1| PREDICTED: KH domain-containing protein At4g18375-like isoform X1
[Glycine max]
Length = 386
Score = 77.8 bits (190), Expect = 3e-12
Identities = 37/47 (78%), Positives = 42/47 (89%)
Frame = +1
Query: 1 IKVHGGKGEQKQRQIHLGGSSQQVALAKQRVDEYVYSQLMLQTGGEQ 141
IKV+GGKGEQK RQI GGS+QQVALAKQRVDEY+YSQL+ QTG +Q
Sbjct: 337 IKVYGGKGEQKHRQIQFGGSAQQVALAKQRVDEYIYSQLIQQTGTQQ 383
>gb|ESW11688.1| hypothetical protein PHAVU_008G051300g [Phaseolus vulgaris]
Length = 379
Score = 77.8 bits (190), Expect = 3e-12
Identities = 37/47 (78%), Positives = 42/47 (89%)
Frame = +1
Query: 1 IKVHGGKGEQKQRQIHLGGSSQQVALAKQRVDEYVYSQLMLQTGGEQ 141
IKV+GGKGEQK RQI GGS+QQVALAKQRVDEY+YSQL+ QTG +Q
Sbjct: 330 IKVYGGKGEQKHRQIQFGGSAQQVALAKQRVDEYIYSQLIQQTGTQQ 376
>gb|ABK93228.1| unknown [Populus trichocarpa]
Length = 159
Score = 77.8 bits (190), Expect = 3e-12
Identities = 38/49 (77%), Positives = 41/49 (83%)
Frame = +1
Query: 1 IKVHGGKGEQKQRQIHLGGSSQQVALAKQRVDEYVYSQLMLQTGGEQLQ 147
IKVHGGKG QK R I L GSSQQVALAKQRVDEY+YSQL+ Q G +QLQ
Sbjct: 110 IKVHGGKGAQKHRHIQLAGSSQQVALAKQRVDEYIYSQLVQQAGTQQLQ 158
>gb|EXB37630.1| KH domain-containing protein [Morus notabilis]
Length = 345
Score = 76.3 bits (186), Expect = 8e-12
Identities = 37/47 (78%), Positives = 41/47 (87%)
Frame = +1
Query: 1 IKVHGGKGEQKQRQIHLGGSSQQVALAKQRVDEYVYSQLMLQTGGEQ 141
IKV+GGKGEQKQRQI GGS+QQVALAKQRVDEYVYSQL+ Q +Q
Sbjct: 270 IKVYGGKGEQKQRQIQFGGSAQQVALAKQRVDEYVYSQLIQQADAQQ 316
>ref|XP_006445391.1| hypothetical protein CICLE_v10021057mg [Citrus clementina]
gi|568819827|ref|XP_006464446.1| PREDICTED:
poly(rC)-binding protein 4-like isoform X1 [Citrus
sinensis] gi|557547653|gb|ESR58631.1| hypothetical
protein CICLE_v10021057mg [Citrus clementina]
Length = 334
Score = 75.9 bits (185), Expect = 1e-11
Identities = 36/49 (73%), Positives = 41/49 (83%)
Frame = +1
Query: 1 IKVHGGKGEQKQRQIHLGGSSQQVALAKQRVDEYVYSQLMLQTGGEQLQ 147
IKV+GGKGEQK R I GGS+QQVALAKQRVDEY+YSQL+ Q G + LQ
Sbjct: 285 IKVYGGKGEQKHRHIQFGGSAQQVALAKQRVDEYIYSQLIQQAGAQYLQ 333
>ref|XP_004492878.1| PREDICTED: poly(rC)-binding protein 3-like isoform X1 [Cicer
arietinum]
Length = 379
Score = 75.5 bits (184), Expect = 1e-11
Identities = 36/46 (78%), Positives = 41/46 (89%)
Frame = +1
Query: 1 IKVHGGKGEQKQRQIHLGGSSQQVALAKQRVDEYVYSQLMLQTGGE 138
IKV+GGKGEQK RQI GGS+QQVALAKQRVDEY+YSQL+ Q+G E
Sbjct: 334 IKVYGGKGEQKHRQIQFGGSAQQVALAKQRVDEYIYSQLIQQSGTE 379
>ref|XP_002327061.1| predicted protein [Populus trichocarpa]
gi|566202473|ref|XP_006375108.1| hypothetical protein
POPTR_0014s04450g [Populus trichocarpa]
gi|550323424|gb|ERP52905.1| hypothetical protein
POPTR_0014s04450g [Populus trichocarpa]
Length = 357
Score = 74.7 bits (182), Expect = 2e-11
Identities = 36/50 (72%), Positives = 40/50 (80%)
Frame = +1
Query: 1 IKVHGGKGEQKQRQIHLGGSSQQVALAKQRVDEYVYSQLMLQTGGEQLQD 150
IKVHGGKG QK R I L GSSQQVALAKQRVDEY+YSQL+ Q G +Q +
Sbjct: 292 IKVHGGKGAQKHRHIQLAGSSQQVALAKQRVDEYIYSQLVQQAGTQQYDE 341
>ref|XP_002272998.2| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 343
Score = 74.3 bits (181), Expect = 3e-11
Identities = 35/46 (76%), Positives = 39/46 (84%)
Frame = +1
Query: 1 IKVHGGKGEQKQRQIHLGGSSQQVALAKQRVDEYVYSQLMLQTGGE 138
IKV+GGKGEQ RQI GGS+QQVALAKQRVDEY+YSQLM Q G +
Sbjct: 295 IKVYGGKGEQNHRQIQFGGSAQQVALAKQRVDEYIYSQLMQQAGAQ 340
>emb|CBI16638.3| unnamed protein product [Vitis vinifera]
Length = 346
Score = 74.3 bits (181), Expect = 3e-11
Identities = 35/46 (76%), Positives = 39/46 (84%)
Frame = +1
Query: 1 IKVHGGKGEQKQRQIHLGGSSQQVALAKQRVDEYVYSQLMLQTGGE 138
IKV+GGKGEQ RQI GGS+QQVALAKQRVDEY+YSQLM Q G +
Sbjct: 295 IKVYGGKGEQNHRQIQFGGSAQQVALAKQRVDEYIYSQLMQQAGAQ 340
>ref|XP_002511610.1| conserved hypothetical protein [Ricinus communis]
gi|223548790|gb|EEF50279.1| conserved hypothetical
protein [Ricinus communis]
Length = 363
Score = 74.3 bits (181), Expect = 3e-11
Identities = 35/49 (71%), Positives = 41/49 (83%)
Frame = +1
Query: 1 IKVHGGKGEQKQRQIHLGGSSQQVALAKQRVDEYVYSQLMLQTGGEQLQ 147
IKV+GGKGE+K R I GG++QQVALAKQRVDEY+YSQL+ Q GG Q Q
Sbjct: 307 IKVYGGKGEKKHRHIQFGGTAQQVALAKQRVDEYIYSQLVQQAGGGQAQ 355
>ref|XP_006445392.1| hypothetical protein CICLE_v10021057mg [Citrus clementina]
gi|568819829|ref|XP_006464447.1| PREDICTED:
poly(rC)-binding protein 4-like isoform X2 [Citrus
sinensis] gi|568819831|ref|XP_006464448.1| PREDICTED:
poly(rC)-binding protein 4-like isoform X3 [Citrus
sinensis] gi|568819833|ref|XP_006464449.1| PREDICTED:
poly(rC)-binding protein 4-like isoform X4 [Citrus
sinensis] gi|557547654|gb|ESR58632.1| hypothetical
protein CICLE_v10021057mg [Citrus clementina]
Length = 330
Score = 72.8 bits (177), Expect = 8e-11
Identities = 34/46 (73%), Positives = 39/46 (84%)
Frame = +1
Query: 1 IKVHGGKGEQKQRQIHLGGSSQQVALAKQRVDEYVYSQLMLQTGGE 138
IKV+GGKGEQK R I GGS+QQVALAKQRVDEY+YSQL+ Q G +
Sbjct: 285 IKVYGGKGEQKHRHIQFGGSAQQVALAKQRVDEYIYSQLIQQAGAQ 330
>ref|XP_004307000.1| PREDICTED: KH domain-containing protein At4g18375-like [Fragaria
vesca subsp. vesca]
Length = 335
Score = 70.5 bits (171), Expect = 4e-10
Identities = 33/47 (70%), Positives = 39/47 (82%)
Frame = +1
Query: 1 IKVHGGKGEQKQRQIHLGGSSQQVALAKQRVDEYVYSQLMLQTGGEQ 141
IKV+GGKGE+K RQI G+SQQV LAKQRVDEY+YSQL+ Q G +Q
Sbjct: 276 IKVYGGKGEEKHRQIQFCGNSQQVVLAKQRVDEYIYSQLIQQAGAQQ 322
>emb|CAN83854.1| hypothetical protein VITISV_031103 [Vitis vinifera]
Length = 321
Score = 68.9 bits (167), Expect = 1e-09
Identities = 35/49 (71%), Positives = 39/49 (79%), Gaps = 3/49 (6%)
Frame = +1
Query: 1 IKVHGGKGEQKQRQIHLGGSSQQ---VALAKQRVDEYVYSQLMLQTGGE 138
IKV+GGKGEQ RQI GGS+QQ VALAKQRVDEY+YSQLM Q G +
Sbjct: 270 IKVYGGKGEQNHRQIQFGGSAQQAYQVALAKQRVDEYIYSQLMQQAGAQ 318
>gb|EOX96435.1| RNA-binding KH domain-containing protein isoform 1 [Theobroma
cacao]
Length = 361
Score = 67.8 bits (164), Expect = 3e-09
Identities = 33/47 (70%), Positives = 38/47 (80%)
Frame = +1
Query: 1 IKVHGGKGEQKQRQIHLGGSSQQVALAKQRVDEYVYSQLMLQTGGEQ 141
IKV+GGKGEQK R I GSSQQVALAKQRVDE +YSQ++ Q G +Q
Sbjct: 310 IKVYGGKGEQKVRHIQFSGSSQQVALAKQRVDECIYSQMIQQAGTQQ 356
>gb|ADN34230.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 331
Score = 67.8 bits (164), Expect = 3e-09
Identities = 32/47 (68%), Positives = 39/47 (82%)
Frame = +1
Query: 1 IKVHGGKGEQKQRQIHLGGSSQQVALAKQRVDEYVYSQLMLQTGGEQ 141
IKV GG+GEQ RQI GGS++QVALAKQRVDEY+YSQ++ Q G +Q
Sbjct: 279 IKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQVIRQAGVQQ 325