BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00005710
         (492 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_717160.1| hypothetical protein BrnapMp063 [Brassica napus...   121   2e-32
ref|XP_003588267.1| hypothetical protein MTR_1g005080 [Medicago ...   134   9e-30
emb|CAN71466.1| hypothetical protein VITISV_038987 [Vitis vinifera]    53   5e-12
ref|XP_002516369.1| conserved hypothetical protein [Ricinus comm...    56   6e-06

>ref|YP_717160.1| hypothetical protein BrnapMp063 [Brassica napus]
           gi|353526387|ref|YP_004927459.1| orf116 (mitochondrion)
           [Brassica oleracea] gi|353526503|ref|YP_004927573.1|
           orf116 (mitochondrion) [Brassica carinata]
           gi|353526704|ref|YP_004927875.1| orf116 (mitochondrion)
           [Brassica rapa subsp. oleifera]
           gi|353531386|ref|YP_004927778.1| orf116 (mitochondrion)
           [Brassica juncea] gi|37591107|dbj|BAC98909.1|
           hypothetical protein [Brassica napus]
           gi|335354892|gb|AEH43448.1| orf116 [Brassica rapa subsp.
           oleifera] gi|335354932|gb|AEH43487.1| orf116 [Brassica
           oleracea] gi|335355034|gb|AEH43588.1| orf116 [Brassica
           carinata] gi|335355119|gb|AEH43672.1| orf116 [Brassica
           juncea] gi|339511321|emb|CBX48376.1| unnamed protein
           product [Brassica napus] gi|371925879|gb|AEX57680.1|
           hypothetical protein RasatMp049 (mitochondrion)
           [Raphanus sativus] gi|443298134|gb|AGC81678.1|
           hypothetical protein DCGMS_00180 (mitochondrion)
           [Raphanus sativus]
          Length = 116

 Score =  121 bits (303), Expect(2) = 2e-32
 Identities = 62/78 (79%), Positives = 66/78 (84%), Gaps = 2/78 (2%)
 Frame = +3

Query: 75  ARFRWTGHMLAVGSMVSKVTSVRQFTFNSSLYVSGPIGRAGTLRSFFLCGTIPGREGNAS 254
           A FR TGHMLAVGSMV KVTSVRQF  NSSLYVSGP+ RAG  RSFFLCGT+PGREGNAS
Sbjct: 31  APFRRTGHMLAVGSMVPKVTSVRQFRLNSSLYVSGPMARAGAPRSFFLCGTMPGREGNAS 90

Query: 255 RRR--TRQLHFGFSISSL 302
           RRR  TRQLHFGFS+  +
Sbjct: 91  RRRTTTRQLHFGFSLHEM 108



 Score = 43.5 bits (101), Expect(2) = 2e-32
 Identities = 19/23 (82%), Positives = 20/23 (86%)
 Frame = +1

Query: 4  SWPYRSVPGGQRGIQYSSSGSFA 72
          SWPY SVP GQRGI+YSSS SFA
Sbjct: 9  SWPYHSVPDGQRGIRYSSSRSFA 31


>ref|XP_003588267.1| hypothetical protein MTR_1g005080 [Medicago truncatula]
           gi|355477315|gb|AES58518.1| hypothetical protein
           MTR_1g005080 [Medicago truncatula]
          Length = 182

 Score =  134 bits (338), Expect = 9e-30
 Identities = 70/98 (71%), Positives = 76/98 (77%), Gaps = 2/98 (2%)
 Frame = -3

Query: 289 EKPKCSCLV--RRLDAFPSLPGIVPHRKKERRVPARPIGPLT*SEELNVNWRTEVTFETI 116
           EK K SC+V  RRLDAFPSLP IVPHRKK+              EEL++NWRTEVTF TI
Sbjct: 29  EKKKYSCVVVVRRLDAFPSLPDIVPHRKKD--------------EELSLNWRTEVTFGTI 74

Query: 115 LPTANMCPVQRKRAAQTNLSCYTESPAGHRGPSGKAMI 2
           LPTAN CPVQR+RAAQ N+SCYTESPAGHRGPSGKAMI
Sbjct: 75  LPTANTCPVQRERAAQKNVSCYTESPAGHRGPSGKAMI 112


>emb|CAN71466.1| hypothetical protein VITISV_038987 [Vitis vinifera]
          Length = 325

 Score = 52.8 bits (125), Expect(2) = 5e-12
 Identities = 29/37 (78%), Positives = 29/37 (78%), Gaps = 2/37 (5%)
 Frame = -1

Query: 288 KSQNVVAL--FAALTHSLLSQVSSHTERKSVESRPDL 184
           KSQNVV L  FAA THSLLS  SSHTERKS E RPDL
Sbjct: 86  KSQNVVVLLLFAASTHSLLSPASSHTERKSAEPRPDL 122



 Score = 43.5 bits (101), Expect(2) = 5e-12
 Identities = 20/24 (83%), Positives = 20/24 (83%)
 Frame = -2

Query: 89  PAETRSANEPELLY*IPRWPPGTE 18
           PA TRSANE ELLY IPRWP GTE
Sbjct: 123 PAGTRSANERELLYRIPRWPSGTE 146


>ref|XP_002516369.1| conserved hypothetical protein [Ricinus communis]
           gi|223544467|gb|EEF45986.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 271

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 24/28 (85%), Positives = 27/28 (96%)
 Frame = -3

Query: 85  RKRAAQTNLSCYTESPAGHRGPSGKAMI 2
           ++RAAQTN+SCYTESP GHRGPSGKAMI
Sbjct: 161 QERAAQTNVSCYTESPVGHRGPSGKAMI 188