BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00004952
         (620 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006363121.1| PREDICTED: ubiquitin receptor RAD23c-like [S...   228   8e-58
ref|XP_004232367.1| PREDICTED: putative DNA repair protein RAD23...   217   2e-54
gb|EMJ16714.1| hypothetical protein PRUPE_ppa007020mg [Prunus pe...   216   3e-54
ref|XP_006482260.1| PREDICTED: ubiquitin receptor RAD23c-like is...   206   3e-51
ref|XP_004233496.1| PREDICTED: putative DNA repair protein RAD23...   205   9e-51
ref|XP_002329330.1| predicted protein [Populus trichocarpa] gi|5...   204   1e-50
ref|XP_002283661.1| PREDICTED: putative DNA repair protein RAD23...   203   3e-50
ref|XP_002516727.1| uv excision repair protein rad23, putative [...   203   3e-50
ref|XP_002283656.1| PREDICTED: putative DNA repair protein RAD23...   203   3e-50
ref|XP_004304134.1| PREDICTED: putative DNA repair protein RAD23...   202   8e-50
ref|XP_002305813.1| ubiquitin family protein [Populus trichocarp...   197   2e-48
ref|XP_003551850.1| PREDICTED: ubiquitin receptor RAD23d-like is...   191   1e-46
gb|EOY02082.1| Rad23 UV excision repair protein family isoform 2...   187   2e-45
gb|EOY02081.1| Rad23 UV excision repair protein family isoform 1...   187   2e-45
ref|XP_002870839.1| hypothetical protein ARALYDRAFT_494129 [Arab...   184   1e-44
gb|EPS71284.1| hypothetical protein M569_03474, partial [Genlise...   182   9e-44
gb|EMJ28918.1| hypothetical protein PRUPE_ppa007047mg [Prunus pe...   181   2e-43
ref|XP_004137651.1| PREDICTED: putative DNA repair protein RAD23...   169   4e-40
ref|XP_006385947.1| hypothetical protein POPTR_0003s18540g [Popu...   165   8e-39
ref|XP_002303970.1| DNA repair protein RAD23 [Populus trichocarp...   165   8e-39

>ref|XP_006363121.1| PREDICTED: ubiquitin receptor RAD23c-like [Solanum tuberosum]
          Length = 390

 Score =  228 bits (582), Expect = 8e-58
 Identities = 132/216 (61%), Positives = 142/216 (65%), Gaps = 10/216 (4%)
 Frame = -1

Query: 620 KSIEAAQGQDVYPAAQQMLIHQGKVLKDTTTLEENKVAENSFVVIMLSKNKVSTSGTSAT 441
           K+IE+ QGQDVYPAAQQMLIHQGKVLKD TTLEENKVAENSFVVIMLSKNKVS++GTS+ 
Sbjct: 28  KNIESVQGQDVYPAAQQMLIHQGKVLKDATTLEENKVAENSFVVIMLSKNKVSSTGTSSI 87

Query: 440 QPAPSNSAQPATSTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVYGQAA 261
             APSN+AQPA STD                                      DVY QAA
Sbjct: 88  PAAPSNTAQPAGSTDQARQTITAPQATAALPQSASESAPASAPVPAAAASSVTDVYDQAA 147

Query: 260 SNLVAGNTLEATVQQILDMGGGSWDRDTVVRALRAAFNNPERAIEYLYSG---------X 108
           SNLVAG+ LE TVQQILDMGGGSWDRDTVVRALRAAFNNPERA++YLYSG          
Sbjct: 148 SNLVAGSNLETTVQQILDMGGGSWDRDTVVRALRAAFNNPERAVDYLYSGIPEQAEIPPV 207

Query: 107 XXXXXXXXXXXXASGQAVNPPVQ-ASQPAVPSGGPN 3
                       ASGQA+NP  Q ASQ AVPS GPN
Sbjct: 208 ARTPAAPAVTAPASGQAINPAAQDASQLAVPSSGPN 243


>ref|XP_004232367.1| PREDICTED: putative DNA repair protein RAD23-3-like [Solanum
           lycopersicum] gi|5640111|emb|CAB51544.1| RAD23 protein
           [Solanum lycopersicum var. cerasiforme]
          Length = 389

 Score =  217 bits (552), Expect = 2e-54
 Identities = 129/216 (59%), Positives = 140/216 (64%), Gaps = 10/216 (4%)
 Frame = -1

Query: 620 KSIEAAQGQDVYPAAQQMLIHQGKVLKDTTTLEENKVAENSFVVIMLSKNKVSTSGTSAT 441
           K+IE+ QGQDVYPAAQQMLIHQGKVLKDTTTLEENKVAENSFVVIMLSKNKVS++GTS+ 
Sbjct: 28  KNIESVQGQDVYPAAQQMLIHQGKVLKDTTTLEENKVAENSFVVIMLSKNKVSSTGTSSI 87

Query: 440 QPAPSNSAQPATSTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVYGQAA 261
             A SN+AQP  STD                                      DVY QAA
Sbjct: 88  SAALSNTAQPDGSTD-QARQTITTPQATAALPQSASESAPTPAPVPAAASSVTDVYDQAA 146

Query: 260 SNLVAGNTLEATVQQILDMGGGSWDRDTVVRALRAAFNNPERAIEYLYSG---------X 108
           SNLVAG+ LE TVQQILDMGGGSWDRDTVVRALRAA+NNPERA++YLYSG          
Sbjct: 147 SNLVAGSNLETTVQQILDMGGGSWDRDTVVRALRAAYNNPERAVDYLYSGIPEQTEIPPV 206

Query: 107 XXXXXXXXXXXXASGQAVNPPVQ-ASQPAVPSGGPN 3
                       AS QA+NP  Q ASQ AVPS GPN
Sbjct: 207 ARAPAAPAVTAPASAQAINPAAQDASQLAVPSSGPN 242


>gb|EMJ16714.1| hypothetical protein PRUPE_ppa007020mg [Prunus persica]
          Length = 385

 Score =  216 bits (551), Expect = 3e-54
 Identities = 121/212 (57%), Positives = 135/212 (63%), Gaps = 6/212 (2%)
 Frame = -1

Query: 620 KSIEAAQGQDVYPAAQQMLIHQGKVLKDTTTLEENKVAENSFVVIMLSKNKVSTSGTSAT 441
           K IE  QG DVYPA+QQMLIHQGKVLKDTTTLEEN+VAENSF+VIML+KNK S SG S+T
Sbjct: 28  KIIETVQGADVYPASQQMLIHQGKVLKDTTTLEENQVAENSFIVIMLTKNKASPSGASST 87

Query: 440 QPAPSNSAQPATSTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVYGQAA 261
           + A ++ AQPA++                                        DVYGQAA
Sbjct: 88  KGAATSQAQPASTPTSTAPPVASPAPVRAVAESQPVVETPAVAAPTDSSRS--DVYGQAA 145

Query: 260 SNLVAGNTLEATVQQILDMGGGSWDRDTVVRALRAAFNNPERAIEYLYSGXXXXXXXXXX 81
           SNLVAG  LEATVQQILDMGGGSWDRDTVVRALRAAFNNPERA+EYLYSG          
Sbjct: 146 SNLVAGTNLEATVQQILDMGGGSWDRDTVVRALRAAFNNPERAVEYLYSGIPEQAEVPPA 205

Query: 80  XXXASGQ------AVNPPVQASQPAVPSGGPN 3
               +G+      A NPP QA QP  P+GGPN
Sbjct: 206 AQVPAGEQAANPPAANPPAQAPQPVAPTGGPN 237


>ref|XP_006482260.1| PREDICTED: ubiquitin receptor RAD23c-like isoform X1 [Citrus
           sinensis]
          Length = 397

 Score =  206 bits (525), Expect = 3e-51
 Identities = 120/222 (54%), Positives = 138/222 (62%), Gaps = 16/222 (7%)
 Frame = -1

Query: 620 KSIEAAQGQDVYPAAQQMLIHQGKVLKDTTTLEENKVAENSFVVIMLSKNKVSTSGTSAT 441
           K+IE  QG DVYPA+QQMLIHQGKVLKD TTLEENKVAENSFVV+ML+K+KVS+SG S  
Sbjct: 28  KNIETVQGSDVYPASQQMLIHQGKVLKDVTTLEENKVAENSFVVVMLTKSKVSSSGASTV 87

Query: 440 QPAPSNSAQ-----------PATSTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 294
             AP+N AQ           P T++                                   
Sbjct: 88  SAAPANQAQTTSSAPPTSTQPTTTSQTPAPTVAPPQSVPESAPTPAAPAPAPAPAPAPVS 147

Query: 293 XXXADVYGQAASNLVAGNTLEATVQQILDMGGGSWDRDTVVRALRAAFNNPERAIEYLYS 114
              +DVYGQAASNLVAG+ LEATVQQILDMGGGSWDR+TV+RALRAA+NNPERA+EYLYS
Sbjct: 148 SSVSDVYGQAASNLVAGSNLEATVQQILDMGGGSWDRETVIRALRAAYNNPERAVEYLYS 207

Query: 113 GXXXXXXXXXXXXXAS-GQAVNPP--VQASQPA--VPSGGPN 3
           G             ++ GQA NPP   QA QPA   P+ GPN
Sbjct: 208 GIPEQTAVPPVARASAGGQAGNPPAQTQAQQPAAPAPTSGPN 249


>ref|XP_004233496.1| PREDICTED: putative DNA repair protein RAD23-3-like isoform 2
           [Solanum lycopersicum]
          Length = 365

 Score =  205 bits (521), Expect = 9e-51
 Identities = 127/210 (60%), Positives = 133/210 (63%), Gaps = 4/210 (1%)
 Frame = -1

Query: 620 KSIEAAQGQDVYPAAQQMLIHQGKVLKDTTTLEENKVAENSFVVIMLSKNKVSTSGTSAT 441
           KSIE  QGQDVYPAAQQMLIHQGKVLKD TTLEENKVAENSFVVIMLSK + +TS    T
Sbjct: 28  KSIETVQGQDVYPAAQQMLIHQGKVLKDPTTLEENKVAENSFVVIMLSKAQPATSTGQPT 87

Query: 440 QP----APSNSAQPATSTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVY 273
           Q     A + S  PA S                                        DVY
Sbjct: 88  QTVAPQATAASVAPAQSAPAPAPAPAPAAAPAPAPAAANPLT---------------DVY 132

Query: 272 GQAASNLVAGNTLEATVQQILDMGGGSWDRDTVVRALRAAFNNPERAIEYLYSGXXXXXX 93
           GQAASNLVAG+TLE TVQQILDMGGGSW+RDTVVRALRAA+NNPERAIEYLYSG      
Sbjct: 133 GQAASNLVAGSTLETTVQQILDMGGGSWERDTVVRALRAAYNNPERAIEYLYSG-IPEQA 191

Query: 92  XXXXXXXASGQAVNPPVQASQPAVPSGGPN 3
                  ASGQAVNPPVQASQ   PS GPN
Sbjct: 192 EIPPVAPASGQAVNPPVQASQ---PSSGPN 218


>ref|XP_002329330.1| predicted protein [Populus trichocarpa]
           gi|566171627|ref|XP_006383464.1| ubiquitin family
           protein [Populus trichocarpa]
           gi|550339075|gb|ERP61261.1| ubiquitin family protein
           [Populus trichocarpa]
          Length = 384

 Score =  204 bits (520), Expect = 1e-50
 Identities = 121/210 (57%), Positives = 137/210 (65%), Gaps = 4/210 (1%)
 Frame = -1

Query: 620 KSIEAAQGQDVYPAAQQMLIHQGKVLKDTTTLEENKVAENSFVVIMLSKNKVSTSGTSAT 441
           K+IE  QG DVYPAAQQMLI+QGKVLKD TTL+E+KVAENSF+V+MLSK+KVS+ G S  
Sbjct: 29  KNIENVQGADVYPAAQQMLIYQGKVLKDDTTLDESKVAENSFIVVMLSKSKVSSGGPSTA 88

Query: 440 QPAPSN--SAQPATSTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVYGQ 267
             AP N  S  P+T+T                                      AD+YGQ
Sbjct: 89  TAAPPNVSSGGPSTAT-AAPPTLVSAQPTSSLPSNVTQPSSTSQAAVPAAAFSDADMYGQ 147

Query: 266 AASNLVAGNTLEATVQQILDMGGGSWDRDTVVRALRAAFNNPERAIEYLYSG-XXXXXXX 90
           AASNLVAG+ LEAT+QQILDMGGGSW+R+TVVRALRAAFNNPERA+EYLYSG        
Sbjct: 148 AASNLVAGSNLEATIQQILDMGGGSWNRETVVRALRAAFNNPERAVEYLYSGIPEQAEVP 207

Query: 89  XXXXXXASGQAVNPPVQASQPAV-PSGGPN 3
                 ASG AVNPP QA QPA  PSGGPN
Sbjct: 208 PVAQGPASGVAVNPPAQAQQPAAPPSGGPN 237


>ref|XP_002283661.1| PREDICTED: putative DNA repair protein RAD23-3 isoform 2 [Vitis
           vinifera]
          Length = 361

 Score =  203 bits (517), Expect = 3e-50
 Identities = 119/210 (56%), Positives = 131/210 (62%), Gaps = 4/210 (1%)
 Frame = -1

Query: 620 KSIEAAQGQDVYPAAQQMLIHQGKVLKDTTTLEENKVAENSFVVIMLSKNKVSTSGTSAT 441
           K+IE   G DVYPAAQQMLIHQGKVLKD TTL+EN+VAE+SFVVIMLSKNKVS  G S T
Sbjct: 28  KNIELVHGTDVYPAAQQMLIHQGKVLKDATTLDENQVAESSFVVIMLSKNKVSAGGASTT 87

Query: 440 QPAPSNSAQPATSTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVYGQAA 261
             AP++ AQP +S+                                       D+YGQAA
Sbjct: 88  SAAPTSQAQPVSSSPPTSNQPSTAPQAPVVALPEVIPEPAPAVAPSISSDS--DIYGQAA 145

Query: 260 SNLVAGNTLEATVQQILDMGGGSWDRDTVVRALRAAFNNPERAIEYLYSG-XXXXXXXXX 84
           SNLVAGN LE T+QQILDMGGGSWDRDTVVRALRAA+NNPERA+EYLYSG          
Sbjct: 146 SNLVAGNNLEVTIQQILDMGGGSWDRDTVVRALRAAYNNPERAVEYLYSGIPEQAEGPPA 205

Query: 83  XXXXASGQAVNPPVQA---SQPAVPSGGPN 3
               ASG AVN P QA    Q  V S GPN
Sbjct: 206 ARPPASGLAVNLPTQAPQGPQTTVASSGPN 235


>ref|XP_002516727.1| uv excision repair protein rad23, putative [Ricinus communis]
           gi|223544100|gb|EEF45625.1| uv excision repair protein
           rad23, putative [Ricinus communis]
          Length = 381

 Score =  203 bits (517), Expect = 3e-50
 Identities = 120/207 (57%), Positives = 130/207 (62%), Gaps = 2/207 (0%)
 Frame = -1

Query: 617 SIEAAQGQDVYPAAQQMLIHQGKVLKDTTTLEENKVAENSFVVIMLSKNKVSTSGTSATQ 438
           +IE AQG DVYPA+QQMLIHQGKVLKD TTLEENKVAENSF+VIMLSK KVS SG S   
Sbjct: 29  NIEIAQGADVYPASQQMLIHQGKVLKDGTTLEENKVAENSFIVIMLSKRKVSPSGGSTAS 88

Query: 437 PAPSNSAQPATSTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVYGQAAS 258
            AP + AQPA ST                                       D+YGQAAS
Sbjct: 89  SAPPSQAQPA-STLPPSATQPSTTAQAPAVTAELPQSAAESTPVVNPVSSETDIYGQAAS 147

Query: 257 NLVAGNTLEATVQQILDMGGGSWDRDTVVRALRAAFNNPERAIEYLYSG-XXXXXXXXXX 81
           NLVAG+ LEATVQQILDMGGGSWDR+TV RALRAAFNNPERA+EYLYSG           
Sbjct: 148 NLVAGSNLEATVQQILDMGGGSWDRETVARALRAAFNNPERAVEYLYSGIPEQPEVQPLP 207

Query: 80  XXXASGQAVNPPVQASQPAVP-SGGPN 3
              +SGQA  P   A +PA P SGG N
Sbjct: 208 RAPSSGQAAIPSATAQEPAAPTSGGAN 234


>ref|XP_002283656.1| PREDICTED: putative DNA repair protein RAD23-3 isoform 1 [Vitis
           vinifera] gi|296087286|emb|CBI33660.3| unnamed protein
           product [Vitis vinifera]
          Length = 381

 Score =  203 bits (517), Expect = 3e-50
 Identities = 119/210 (56%), Positives = 131/210 (62%), Gaps = 4/210 (1%)
 Frame = -1

Query: 620 KSIEAAQGQDVYPAAQQMLIHQGKVLKDTTTLEENKVAENSFVVIMLSKNKVSTSGTSAT 441
           K+IE   G DVYPAAQQMLIHQGKVLKD TTL+EN+VAE+SFVVIMLSKNKVS  G S T
Sbjct: 28  KNIELVHGTDVYPAAQQMLIHQGKVLKDATTLDENQVAESSFVVIMLSKNKVSAGGASTT 87

Query: 440 QPAPSNSAQPATSTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVYGQAA 261
             AP++ AQP +S+                                       D+YGQAA
Sbjct: 88  SAAPTSQAQPVSSSPPTSNQPSTAPQAPVVALPEVIPEPAPAVAPSISSDS--DIYGQAA 145

Query: 260 SNLVAGNTLEATVQQILDMGGGSWDRDTVVRALRAAFNNPERAIEYLYSG-XXXXXXXXX 84
           SNLVAGN LE T+QQILDMGGGSWDRDTVVRALRAA+NNPERA+EYLYSG          
Sbjct: 146 SNLVAGNNLEVTIQQILDMGGGSWDRDTVVRALRAAYNNPERAVEYLYSGIPEQAEGPPA 205

Query: 83  XXXXASGQAVNPPVQA---SQPAVPSGGPN 3
               ASG AVN P QA    Q  V S GPN
Sbjct: 206 ARPPASGLAVNLPTQAPQGPQTTVASSGPN 235


>ref|XP_004304134.1| PREDICTED: putative DNA repair protein RAD23-3-like [Fragaria vesca
           subsp. vesca]
          Length = 390

 Score =  202 bits (513), Expect = 8e-50
 Identities = 117/215 (54%), Positives = 130/215 (60%), Gaps = 11/215 (5%)
 Frame = -1

Query: 614 IEAAQGQDVYPAAQQMLIHQGKVLKDTTTLEENKVAENSFVVIMLSKNKVSTSGTSATQP 435
           IE AQG DVYPA++QMLIHQGKVLKD TTLEEN+VAENSF+VIMLSK   S SG+S+ Q 
Sbjct: 30  IEKAQGADVYPASKQMLIHQGKVLKDATTLEENQVAENSFIVIMLSK--ASPSGSSSAQS 87

Query: 434 APSNSAQPATSTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVYGQAASN 255
           AP + AQPA +                                        DVYGQAASN
Sbjct: 88  APKSQAQPAATPSSTTTPTAAPAPTPVVAPPQPAAETAAVVAPTDSSVT--DVYGQAASN 145

Query: 254 LVAGNTLEATVQQILDMGGGSWDRDTVVRALRAAFNNPERAIEYLYSGXXXXXXXXXXXX 75
           LVAGN LE  VQQILDMGGGSWDRDTV+RALRAAFNNPERA+EYLYSG            
Sbjct: 146 LVAGNNLEVIVQQILDMGGGSWDRDTVLRALRAAFNNPERAVEYLYSGIPEQAEVPPAAQ 205

Query: 74  XASGQ-----------AVNPPVQASQPAVPSGGPN 3
              G+           A+NPP QA Q A P+GGPN
Sbjct: 206 VPVGEQAVNPLAGNPPAINPPAQAPQAAAPAGGPN 240


>ref|XP_002305813.1| ubiquitin family protein [Populus trichocarpa]
           gi|222848777|gb|EEE86324.1| ubiquitin family protein
           [Populus trichocarpa]
          Length = 385

 Score =  197 bits (501), Expect = 2e-48
 Identities = 111/211 (52%), Positives = 133/211 (63%), Gaps = 5/211 (2%)
 Frame = -1

Query: 620 KSIEAAQGQDVYPAAQQMLIHQGKVLKDTTTLEENKVAENSFVVIMLSKNKVSTSGTSAT 441
           K+IE+ QG DVYPAAQQML++QGKVLKD TTL+ENKV+E+SF V+MLSK+KVS+ G S  
Sbjct: 28  KNIESVQGADVYPAAQQMLVYQGKVLKDDTTLDENKVSESSFFVVMLSKSKVSSGGPSTA 87

Query: 440 QPAPSNSAQPATSTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVYGQAA 261
             AP++ A PA+S                                        ++YGQAA
Sbjct: 88  PAAPASQAPPASSLPSNVTQPSITSQAPVPAAALPQSAAESSPAVVTSALLDTNMYGQAA 147

Query: 260 SNLVAGNTLEATVQQILDMGGGSWDRDTVVRALRAAFNNPERAIEYLYSG----XXXXXX 93
           SNLVAG+ LEAT+Q+ILDMGGG W+R+TVVRALRAAFNNPERAI+YLYSG          
Sbjct: 148 SNLVAGSNLEATIQEILDMGGGDWNRETVVRALRAAFNNPERAIDYLYSGIPEQAEVPPV 207

Query: 92  XXXXXXXASGQAVNPPVQASQPAV-PSGGPN 3
                  ASG AVNPP  A QP V P+ GPN
Sbjct: 208 AQVVQGPASGNAVNPPALAPQPVVAPNSGPN 238


>ref|XP_003551850.1| PREDICTED: ubiquitin receptor RAD23d-like isoform X1 [Glycine max]
          Length = 375

 Score =  191 bits (485), Expect = 1e-46
 Identities = 110/210 (52%), Positives = 127/210 (60%), Gaps = 4/210 (1%)
 Frame = -1

Query: 620 KSIEAAQGQDVYPAAQQMLIHQGKVLKDTTTLEENKVAENSFVVIMLSKNKVSTSGTSAT 441
           K+IE AQG DVYPAAQQMLIHQGKVL D TTLEENKV EN+FVVIMLSKNKVS+  +SA 
Sbjct: 28  KNIETAQGADVYPAAQQMLIHQGKVLNDATTLEENKVVENNFVVIMLSKNKVSSGASSAP 87

Query: 440 Q---PAPSNSAQPATSTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVYG 270
                 P +S  P +ST                                        +Y 
Sbjct: 88  SNLGTQPQSSLPPTSSTSQPPASAVGQGESNSEQSPVITPPTIAVP----------SIYD 137

Query: 269 QAASNLVAGNTLEATVQQILDMGGGSWDRDTVVRALRAAFNNPERAIEYLYSG-XXXXXX 93
            AASNL+AG+ LE T+QQIL+MGGG+WDRDTV  AL AAFNNPERAIEYLYSG       
Sbjct: 138 HAASNLMAGSNLETTIQQILEMGGGNWDRDTVTGALHAAFNNPERAIEYLYSGIPERADV 197

Query: 92  XXXXXXXASGQAVNPPVQASQPAVPSGGPN 3
                   +GQA N  +Q++QPAVP+GGPN
Sbjct: 198 PAAVRSLITGQAENSSIQSTQPAVPTGGPN 227


>gb|EOY02082.1| Rad23 UV excision repair protein family isoform 2 [Theobroma cacao]
          Length = 340

 Score =  187 bits (475), Expect = 2e-45
 Identities = 112/216 (51%), Positives = 124/216 (57%), Gaps = 10/216 (4%)
 Frame = -1

Query: 620 KSIEAAQGQDVYPAAQQMLIHQGKVLKDTTTLEENKVAENSFVVIMLSKNKVS-----TS 456
           K+IE  QG DVYPAAQQMLIH+GKVLKD TTL EN V ENSF+VIML+KNK S     T+
Sbjct: 28  KNIETVQGADVYPAAQQMLIHKGKVLKDDTTLAENSVTENSFIVIMLTKNKSSSGEGSTA 87

Query: 455 GTSATQPAPSNSAQPATSTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADV 276
            T+ T  AP  S  P   T                                       DV
Sbjct: 88  STAPTTKAPQASVPPPAPTPASTAPVATTAPAAPVTESAPVASSTPASES--------DV 139

Query: 275 YGQAASNLVAGNTLEATVQQILDMGGGSWDRDTVVRALRAAFNNPERAIEYLYSG-XXXX 99
           YGQAASNLVAG+ LE  +QQILDMGGG+WDRD VVRALRAA+NNPERA+EYLYSG     
Sbjct: 140 YGQAASNLVAGSHLEGAIQQILDMGGGTWDRDIVVRALRAAYNNPERAVEYLYSGIPEQA 199

Query: 98  XXXXXXXXXASGQAVNPPVQASQPA----VPSGGPN 3
                      GQA NPP Q  QPA    VP+ GPN
Sbjct: 200 EVPPVARAPVVGQATNPPAQPQQPAQASPVPTSGPN 235


>gb|EOY02081.1| Rad23 UV excision repair protein family isoform 1 [Theobroma cacao]
          Length = 385

 Score =  187 bits (475), Expect = 2e-45
 Identities = 112/216 (51%), Positives = 124/216 (57%), Gaps = 10/216 (4%)
 Frame = -1

Query: 620 KSIEAAQGQDVYPAAQQMLIHQGKVLKDTTTLEENKVAENSFVVIMLSKNKVS-----TS 456
           K+IE  QG DVYPAAQQMLIH+GKVLKD TTL EN V ENSF+VIML+KNK S     T+
Sbjct: 28  KNIETVQGADVYPAAQQMLIHKGKVLKDDTTLAENSVTENSFIVIMLTKNKSSSGEGSTA 87

Query: 455 GTSATQPAPSNSAQPATSTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADV 276
            T+ T  AP  S  P   T                                       DV
Sbjct: 88  STAPTTKAPQASVPPPAPTPASTAPVATTAPAAPVTESAPVASSTPASES--------DV 139

Query: 275 YGQAASNLVAGNTLEATVQQILDMGGGSWDRDTVVRALRAAFNNPERAIEYLYSG-XXXX 99
           YGQAASNLVAG+ LE  +QQILDMGGG+WDRD VVRALRAA+NNPERA+EYLYSG     
Sbjct: 140 YGQAASNLVAGSHLEGAIQQILDMGGGTWDRDIVVRALRAAYNNPERAVEYLYSGIPEQA 199

Query: 98  XXXXXXXXXASGQAVNPPVQASQPA----VPSGGPN 3
                      GQA NPP Q  QPA    VP+ GPN
Sbjct: 200 EVPPVARAPVVGQATNPPAQPQQPAQASPVPTSGPN 235


>ref|XP_002870839.1| hypothetical protein ARALYDRAFT_494129 [Arabidopsis lyrata subsp.
           lyrata] gi|297316675|gb|EFH47098.1| hypothetical protein
           ARALYDRAFT_494129 [Arabidopsis lyrata subsp. lyrata]
          Length = 377

 Score =  184 bits (468), Expect = 1e-44
 Identities = 113/211 (53%), Positives = 125/211 (59%), Gaps = 5/211 (2%)
 Frame = -1

Query: 620 KSIEAAQGQDVYPAAQQMLIHQGKVLKDTTTLEENKVAENSFVVIMLSKNKVSTSGTS-A 444
           K+IE  +G + YPA +QMLIHQGKVLKD TTLEEN V ENSF+VIMLSK KVS+SG S A
Sbjct: 28  KAIETVKGAE-YPAVKQMLIHQGKVLKDETTLEENNVVENSFIVIMLSKTKVSSSGASTA 86

Query: 443 TQPAPSNSAQPATSTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVYGQA 264
           + PAPS +     +T                                       DVYGQA
Sbjct: 87  SAPAPSATQAQTVATPQVSAPTVSVPEPTSGTATAAAPAAAAAVQT--------DVYGQA 138

Query: 263 ASNLVAGNTLEATVQQILDMGGGSWDRDTVVRALRAAFNNPERAIEYLYSGXXXXXXXXX 84
           ASNLVAG TLE+TVQQILDMGGGSWDRDTVVRALRAAFNNPERA+EYLYSG         
Sbjct: 139 ASNLVAGTTLESTVQQILDMGGGSWDRDTVVRALRAAFNNPERAVEYLYSGIPAQAEIPP 198

Query: 83  XXXXAS--GQAVNPPVQASQ--PAVPSGGPN 3
                S   Q  NP  Q  Q  P   +GGPN
Sbjct: 199 VAQAPSTGEQPANPQAQPQQAAPVAATGGPN 229


>gb|EPS71284.1| hypothetical protein M569_03474, partial [Genlisea aurea]
          Length = 389

 Score =  182 bits (461), Expect = 9e-44
 Identities = 112/213 (52%), Positives = 123/213 (57%), Gaps = 9/213 (4%)
 Frame = -1

Query: 614 IEAAQGQDVYPAAQQMLIHQGKVLKDTTTLEENKVAENSFVVIMLSKNKV-----STSGT 450
           IE AQG+  YPAAQQMLIHQGKVLKD TTLEEN VAE SFVVIML+KNK      ST+ +
Sbjct: 30  IETAQGE--YPAAQQMLIHQGKVLKDATTLEENNVAEKSFVVIMLTKNKATSGEGSTTSS 87

Query: 449 SATQPAPSNSAQPATSTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVYG 270
           SAT   P  S    T+T                                       DVY 
Sbjct: 88  SATAKVPQGSGSAPTATPVQESETPHPPTPACDLTVLWLFLASPLQPITEQRPSS-DVYS 146

Query: 269 QAASNLVAGNTLEATVQQILDMGGGSWDRDTVVRALRAAFNNPERAIEYLYSGXXXXXXX 90
           QAASNLVAGN LE T+QQILDMGGG+WDRD+VVRALRAAFNNPERA+EYLYSG       
Sbjct: 147 QAASNLVAGNNLEGTIQQILDMGGGTWDRDSVVRALRAAFNNPERAVEYLYSGIPESAEL 206

Query: 89  XXXXXXASGQ---AVNPPVQASQPA-VPSGGPN 3
                  +GQ   A   P QA  P  +PS GPN
Sbjct: 207 PPAPGSGAGQQAAAAAAPPQAQPPVPIPSAGPN 239


>gb|EMJ28918.1| hypothetical protein PRUPE_ppa007047mg [Prunus persica]
          Length = 385

 Score =  181 bits (458), Expect = 2e-43
 Identities = 105/211 (49%), Positives = 121/211 (57%), Gaps = 5/211 (2%)
 Frame = -1

Query: 620 KSIEAAQGQDVYPAAQQMLIHQGKVLKDTTTLEENKVAENSFVVIMLSKNKVSTSGTSAT 441
           K IE +QG DVYPA+QQMLIHQGKVLKD+TTL+ENKVAENSFVVIML+K+K S+   S  
Sbjct: 28  KQIETSQGSDVYPASQQMLIHQGKVLKDSTTLDENKVAENSFVVIMLTKSKSSSGEGSGA 87

Query: 440 QPAPSNSAQPATSTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVYGQAA 261
             A +  A   ++                                       +D YGQAA
Sbjct: 88  STATTTKAPQPSAPSAAPTATLTAPQAPIPTSAPPASVTTPAPVSSATTEVESDPYGQAA 147

Query: 260 SNLVAGNTLEATVQQILDMGGGSWDRDTVVRALRAAFNNPERAIEYLYSG-XXXXXXXXX 84
           S+LVAG  LE T+QQILDMGGG+WDRDTVVRALRAAFNNP RAI+YLYSG          
Sbjct: 148 SDLVAGTNLEGTIQQILDMGGGTWDRDTVVRALRAAFNNPARAIDYLYSGIPEQPEVPPA 207

Query: 83  XXXXASGQAVN----PPVQASQPAVPSGGPN 3
                SG+  N    PP  A   A P  GPN
Sbjct: 208 ARIPVSGEVANLPAQPPQSAQPAATPPSGPN 238


>ref|XP_004137651.1| PREDICTED: putative DNA repair protein RAD23-1-like [Cucumis
           sativus]
          Length = 358

 Score =  169 bits (429), Expect = 4e-40
 Identities = 104/209 (49%), Positives = 122/209 (58%), Gaps = 3/209 (1%)
 Frame = -1

Query: 620 KSIEAAQGQDVYPAAQQMLIHQGKVLKDTTTLEENKVAENSFVVIMLSKNKVSTS-GTSA 444
           K+IE  QG+D YP  QQ+LIH GKVLKD +TL ENKV+E  F+V+MLSK+K S S G S+
Sbjct: 28  KNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLAENKVSEEGFLVVMLSKSKTSVSAGQSS 87

Query: 443 TQPAPSNS-AQPATSTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVYGQ 267
           TQPA +   AQP  S+                                       D YGQ
Sbjct: 88  TQPAQNPPVAQPVLSSTPAAQVTPSVQT---------------------------DTYGQ 120

Query: 266 AASNLVAGNTLEATVQQILDMGGGSWDRDTVVRALRAAFNNPERAIEYLYSG-XXXXXXX 90
           AASNLVAGN LE TVQQ++DMGGG+WDR+TVVRALRAA+NNPERA++YLYSG        
Sbjct: 121 AASNLVAGNNLEQTVQQLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVA 180

Query: 89  XXXXXXASGQAVNPPVQASQPAVPSGGPN 3
                  SGQA      AS PA  SG PN
Sbjct: 181 VPVGRFGSGQATE--TDASVPAPVSGAPN 207


>ref|XP_006385947.1| hypothetical protein POPTR_0003s18540g [Populus trichocarpa]
           gi|550343468|gb|ERP63744.1| hypothetical protein
           POPTR_0003s18540g [Populus trichocarpa]
          Length = 372

 Score =  165 bits (418), Expect = 8e-39
 Identities = 94/207 (45%), Positives = 116/207 (56%), Gaps = 1/207 (0%)
 Frame = -1

Query: 620 KSIEAAQGQDVYPAAQQMLIHQGKVLKDTTTLEENKVAENSFVVIMLSKNKVSTSGTSAT 441
           K+IE AQG+D YP  QQ+LIH GKVLKD TTL +NKV E+ F+V+MLSK+K  T+GTS+T
Sbjct: 28  KNIEDAQGKDNYPCGQQLLIHNGKVLKDETTLADNKVTEDGFLVVMLSKSKTGTAGTSST 87

Query: 440 QPAPSNSAQPATSTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVYGQAA 261
           QP  +      TS                                        D YGQAA
Sbjct: 88  QPVSTPPTTTPTSISTPAPDAQALDSKSASASDSATANAQS------------DTYGQAA 135

Query: 260 SNLVAGNTLEATVQQILDMGGGSWDRDTVVRALRAAFNNPERAIEYLYSG-XXXXXXXXX 84
           SNLVAG+ LE T+QQI+DMGGG+WD++TV RALRAA+NNPERA++YLYSG          
Sbjct: 136 SNLVAGSNLEQTLQQIMDMGGGTWDKETVTRALRAAYNNPERAVDYLYSGIPETAEVAVP 195

Query: 83  XXXXASGQAVNPPVQASQPAVPSGGPN 3
                + QA       + PA   G PN
Sbjct: 196 VARFPADQATETGAAPAAPAPAFGAPN 222


>ref|XP_002303970.1| DNA repair protein RAD23 [Populus trichocarpa]
           gi|222841402|gb|EEE78949.1| DNA repair protein RAD23
           [Populus trichocarpa]
          Length = 358

 Score =  165 bits (418), Expect = 8e-39
 Identities = 94/207 (45%), Positives = 116/207 (56%), Gaps = 1/207 (0%)
 Frame = -1

Query: 620 KSIEAAQGQDVYPAAQQMLIHQGKVLKDTTTLEENKVAENSFVVIMLSKNKVSTSGTSAT 441
           K+IE AQG+D YP  QQ+LIH GKVLKD TTL +NKV E+ F+V+MLSK+K  T+GTS+T
Sbjct: 28  KNIEDAQGKDNYPCGQQLLIHNGKVLKDETTLADNKVTEDGFLVVMLSKSKTGTAGTSST 87

Query: 440 QPAPSNSAQPATSTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVYGQAA 261
           QP  +      TS                                        D YGQAA
Sbjct: 88  QPVSTPPTTTPTSISTPAPDAQAFAQS--------------------------DTYGQAA 121

Query: 260 SNLVAGNTLEATVQQILDMGGGSWDRDTVVRALRAAFNNPERAIEYLYSG-XXXXXXXXX 84
           SNLVAG+ LE T+QQI+DMGGG+WD++TV RALRAA+NNPERA++YLYSG          
Sbjct: 122 SNLVAGSNLEQTLQQIMDMGGGTWDKETVTRALRAAYNNPERAVDYLYSGIPETAEVAVP 181

Query: 83  XXXXASGQAVNPPVQASQPAVPSGGPN 3
                + QA       + PA   G PN
Sbjct: 182 VARFPADQATETGAAPAAPAPAFGAPN 208