BLASTX nr result
ID: Atropa21_contig00004657
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00004657
(499 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004235826.1| PREDICTED: ATP-dependent Clp protease adapte... 149 3e-34
ref|XP_006341627.1| PREDICTED: uncharacterized protein LOC102601... 149 5e-34
ref|XP_004157424.1| PREDICTED: ATP-dependent Clp protease adapte... 102 7e-20
ref|XP_004137466.1| PREDICTED: ATP-dependent Clp protease adapte... 102 7e-20
ref|XP_006391113.1| hypothetical protein EUTSA_v10019264mg [Eutr... 100 2e-19
ref|XP_002274839.1| PREDICTED: ATP-dependent Clp protease adapte... 100 3e-19
ref|XP_002311446.1| hypothetical protein POPTR_0008s11660g [Popu... 97 2e-18
ref|XP_002888676.1| hypothetical protein ARALYDRAFT_894639 [Arab... 95 1e-17
gb|EMJ27174.1| hypothetical protein PRUPE_ppa012655mg [Prunus pe... 94 2e-17
ref|NP_564937.1| protein ClpS1 [Arabidopsis thaliana] gi|5734712... 93 3e-17
ref|NP_001077794.1| protein ClpS1 [Arabidopsis thaliana] gi|3321... 93 3e-17
ref|XP_002315955.2| hypothetical protein POPTR_0010s13860g [Popu... 92 6e-17
gb|EOY02119.1| Ribosomal protein L12/ ATP-dependent Clp protease... 92 6e-17
ref|XP_006302940.1| hypothetical protein CARUB_v10021079mg [Caps... 92 6e-17
emb|CBI27053.3| unnamed protein product [Vitis vinifera] 90 3e-16
ref|XP_002281884.1| PREDICTED: ATP-dependent Clp protease adapte... 90 3e-16
gb|EMJ10924.1| hypothetical protein PRUPE_ppa012720mg [Prunus pe... 87 2e-15
ref|XP_006838422.1| hypothetical protein AMTR_s00002p00109470 [A... 86 4e-15
ref|XP_004299231.1| PREDICTED: ATP-dependent Clp protease adapte... 85 9e-15
ref|XP_006484424.1| PREDICTED: uncharacterized protein LOC102625... 84 3e-14
>ref|XP_004235826.1| PREDICTED: ATP-dependent Clp protease adapter protein ClpS-like
[Solanum lycopersicum]
Length = 159
Score = 149 bits (377), Expect = 3e-34
Identities = 72/78 (92%), Positives = 74/78 (94%)
Frame = -3
Query: 236 MVMETAICGRVALSPHQIFQTKPGDKKPRQKQWTNRNALMAMPIAGVGKGGGVLDKPVIE 57
MVMETAICGRVALSPHQIFQ KPGDKKPRQKQWTNRNALMAM IAG GKGGG+L+KPVIE
Sbjct: 1 MVMETAICGRVALSPHQIFQPKPGDKKPRQKQWTNRNALMAMSIAGAGKGGGLLEKPVIE 60
Query: 56 KTTPGRVSEFDLRKSRKM 3
KTTPGR SEFDLRKSRKM
Sbjct: 61 KTTPGRESEFDLRKSRKM 78
>ref|XP_006341627.1| PREDICTED: uncharacterized protein LOC102601216 [Solanum tuberosum]
Length = 159
Score = 149 bits (375), Expect = 5e-34
Identities = 72/78 (92%), Positives = 74/78 (94%)
Frame = -3
Query: 236 MVMETAICGRVALSPHQIFQTKPGDKKPRQKQWTNRNALMAMPIAGVGKGGGVLDKPVIE 57
MVMETAICGRVALSPHQIFQ KPGDKKPRQKQWTNRNALMAM IAG GKGGG+L+KPVIE
Sbjct: 1 MVMETAICGRVALSPHQIFQPKPGDKKPRQKQWTNRNALMAMSIAGSGKGGGLLEKPVIE 60
Query: 56 KTTPGRVSEFDLRKSRKM 3
KTTPGR SEFDLRKSRKM
Sbjct: 61 KTTPGRESEFDLRKSRKM 78
>ref|XP_004157424.1| PREDICTED: ATP-dependent Clp protease adapter protein ClpS-like
[Cucumis sativus]
Length = 158
Score = 102 bits (253), Expect = 7e-20
Identities = 52/76 (68%), Positives = 60/76 (78%), Gaps = 1/76 (1%)
Frame = -3
Query: 230 METAICGRVALSPHQIF-QTKPGDKKPRQKQWTNRNALMAMPIAGVGKGGGVLDKPVIEK 54
ME AICGRV LSP+Q F TKPGDK KQ NR+ALM + +A +GKGGG+L+KP IEK
Sbjct: 1 MEAAICGRVPLSPNQFFTSTKPGDKYYFHKQCRNRSALMMISVAELGKGGGLLEKPTIEK 60
Query: 53 TTPGRVSEFDLRKSRK 6
TTPGR SEFD+RKSRK
Sbjct: 61 TTPGRESEFDVRKSRK 76
>ref|XP_004137466.1| PREDICTED: ATP-dependent Clp protease adapter protein ClpS-like
[Cucumis sativus]
Length = 158
Score = 102 bits (253), Expect = 7e-20
Identities = 52/76 (68%), Positives = 60/76 (78%), Gaps = 1/76 (1%)
Frame = -3
Query: 230 METAICGRVALSPHQIF-QTKPGDKKPRQKQWTNRNALMAMPIAGVGKGGGVLDKPVIEK 54
ME AICGRV LSP+Q F TKPGDK KQ NR+ALM + +A +GKGGG+L+KP IEK
Sbjct: 1 MEAAICGRVPLSPNQFFTSTKPGDKYYFHKQCRNRSALMMISVAELGKGGGLLEKPAIEK 60
Query: 53 TTPGRVSEFDLRKSRK 6
TTPGR SEFD+RKSRK
Sbjct: 61 TTPGRESEFDVRKSRK 76
>ref|XP_006391113.1| hypothetical protein EUTSA_v10019264mg [Eutrema salsugineum]
gi|557087547|gb|ESQ28399.1| hypothetical protein
EUTSA_v10019264mg [Eutrema salsugineum]
Length = 158
Score = 100 bits (249), Expect = 2e-19
Identities = 51/77 (66%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Frame = -3
Query: 230 METAICGRVALSPHQIFQTKPGDKKPRQK-QWTNRNALMAMPIAGVGKGGGVLDKPVIEK 54
METAICGR+AL+P +F +K GDK K NR LMAM + +GKGGGVLDKP+IEK
Sbjct: 1 METAICGRLALAPSTLFNSKSGDKHSISKGPCLNRGLLMAMSTSAMGKGGGVLDKPIIEK 60
Query: 53 TTPGRVSEFDLRKSRKM 3
TTPGR SEFDLRKS+KM
Sbjct: 61 TTPGRESEFDLRKSKKM 77
>ref|XP_002274839.1| PREDICTED: ATP-dependent Clp protease adapter protein ClpS [Vitis
vinifera] gi|297734178|emb|CBI15425.3| unnamed protein
product [Vitis vinifera]
Length = 157
Score = 99.8 bits (247), Expect = 3e-19
Identities = 48/76 (63%), Positives = 55/76 (72%)
Frame = -3
Query: 230 METAICGRVALSPHQIFQTKPGDKKPRQKQWTNRNALMAMPIAGVGKGGGVLDKPVIEKT 51
METAICGRV LSP+ F +K GDK KQWT+R LM + A GKG GVL++P IE+
Sbjct: 1 METAICGRVPLSPNHFFTSKSGDKHSLSKQWTHRTMLMTVSAAAPGKGSGVLERPTIERI 60
Query: 50 TPGRVSEFDLRKSRKM 3
PGR SEFDLRKSRKM
Sbjct: 61 MPGRESEFDLRKSRKM 76
>ref|XP_002311446.1| hypothetical protein POPTR_0008s11660g [Populus trichocarpa]
gi|118481362|gb|ABK92624.1| unknown [Populus
trichocarpa] gi|222851266|gb|EEE88813.1| hypothetical
protein POPTR_0008s11660g [Populus trichocarpa]
Length = 158
Score = 97.1 bits (240), Expect = 2e-18
Identities = 49/77 (63%), Positives = 58/77 (75%), Gaps = 1/77 (1%)
Frame = -3
Query: 230 METAICGRVALSPHQIFQTKPGDKKPRQK-QWTNRNALMAMPIAGVGKGGGVLDKPVIEK 54
METAICGR+ALSP+ +F KPGDK + NR LMA+ GKGGG+L+KPVIE+
Sbjct: 1 METAICGRIALSPNHVFNPKPGDKNSVCRGPCANRGILMAISTTCSGKGGGLLEKPVIER 60
Query: 53 TTPGRVSEFDLRKSRKM 3
TTPGR SEFDLRKS+KM
Sbjct: 61 TTPGRESEFDLRKSKKM 77
>ref|XP_002888676.1| hypothetical protein ARALYDRAFT_894639 [Arabidopsis lyrata subsp.
lyrata] gi|297334517|gb|EFH64935.1| hypothetical protein
ARALYDRAFT_894639 [Arabidopsis lyrata subsp. lyrata]
Length = 159
Score = 94.7 bits (234), Expect = 1e-17
Identities = 50/78 (64%), Positives = 58/78 (74%), Gaps = 2/78 (2%)
Frame = -3
Query: 230 METAICGRVALSPHQIFQTKPGDKKPRQK-QWTNRNALMAMPI-AGVGKGGGVLDKPVIE 57
METAICGR+AL+P +F +K GDK K NR LM + A +GKGGGVLDKP+IE
Sbjct: 1 METAICGRLALAPSSLFNSKSGDKHLVSKGPCVNRGVLMTLSTYAALGKGGGVLDKPIIE 60
Query: 56 KTTPGRVSEFDLRKSRKM 3
KTTPGR SEFDLRKS+KM
Sbjct: 61 KTTPGRESEFDLRKSKKM 78
>gb|EMJ27174.1| hypothetical protein PRUPE_ppa012655mg [Prunus persica]
Length = 159
Score = 94.0 bits (232), Expect = 2e-17
Identities = 48/76 (63%), Positives = 56/76 (73%), Gaps = 1/76 (1%)
Frame = -3
Query: 230 METAICGRVALSPHQIFQTKPGDKKPRQK-QWTNRNALMAMPIAGVGKGGGVLDKPVIEK 54
METAICGR+ LSP+ +F KPGD+ P K TN MA+ G GKGGG+L++PVIEK
Sbjct: 1 METAICGRLPLSPNHVFNPKPGDRHPLCKGPCTNLGIPMAVSATGPGKGGGLLERPVIEK 60
Query: 53 TTPGRVSEFDLRKSRK 6
TTP R SEFDLRKSRK
Sbjct: 61 TTPARDSEFDLRKSRK 76
>ref|NP_564937.1| protein ClpS1 [Arabidopsis thaliana]
gi|5734712|gb|AAD49977.1|AC008075_10 ESTs gb|T41781 and
gb|AA586096 come from this gene [Arabidopsis thaliana]
gi|12484207|gb|AAG54002.1|AF336921_1 unknown protein
[Arabidopsis thaliana] gi|15010628|gb|AAK73973.1|
At1g68660/F24J5_4 [Arabidopsis thaliana]
gi|21464569|gb|AAM52239.1| At1g68660/F24J5_4
[Arabidopsis thaliana] gi|21553930|gb|AAM63011.1|
unknown [Arabidopsis thaliana]
gi|332196703|gb|AEE34824.1| ribosomal protein L12/
ATP-dependent Clp protease adaptor protein ClpS family
protein [Arabidopsis thaliana]
Length = 159
Score = 93.2 bits (230), Expect = 3e-17
Identities = 49/78 (62%), Positives = 59/78 (75%), Gaps = 2/78 (2%)
Frame = -3
Query: 230 METAICGRVALSPHQIFQTKPGDKKPRQK-QWTNRNALMAMPI-AGVGKGGGVLDKPVIE 57
METAICGR+AL+P +F +K GDK K NR+ LM + A +GKGGGVLDKP+IE
Sbjct: 1 METAICGRLALAPSSLFNSKSGDKHLVSKGPCVNRSILMTLSTSAALGKGGGVLDKPIIE 60
Query: 56 KTTPGRVSEFDLRKSRKM 3
KTTPGR SEFDLRKS+K+
Sbjct: 61 KTTPGRESEFDLRKSKKI 78
>ref|NP_001077794.1| protein ClpS1 [Arabidopsis thaliana] gi|332196704|gb|AEE34825.1|
ribosomal protein L12/ ATP-dependent Clp protease
adaptor protein ClpS family protein [Arabidopsis
thaliana]
Length = 129
Score = 93.2 bits (230), Expect = 3e-17
Identities = 49/78 (62%), Positives = 59/78 (75%), Gaps = 2/78 (2%)
Frame = -3
Query: 230 METAICGRVALSPHQIFQTKPGDKKPRQK-QWTNRNALMAMPI-AGVGKGGGVLDKPVIE 57
METAICGR+AL+P +F +K GDK K NR+ LM + A +GKGGGVLDKP+IE
Sbjct: 1 METAICGRLALAPSSLFNSKSGDKHLVSKGPCVNRSILMTLSTSAALGKGGGVLDKPIIE 60
Query: 56 KTTPGRVSEFDLRKSRKM 3
KTTPGR SEFDLRKS+K+
Sbjct: 61 KTTPGRESEFDLRKSKKI 78
>ref|XP_002315955.2| hypothetical protein POPTR_0010s13860g [Populus trichocarpa]
gi|550329760|gb|EEF02126.2| hypothetical protein
POPTR_0010s13860g [Populus trichocarpa]
Length = 160
Score = 92.4 bits (228), Expect = 6e-17
Identities = 47/79 (59%), Positives = 60/79 (75%), Gaps = 3/79 (3%)
Frame = -3
Query: 230 METAICGRVALSPHQIFQTKPGDKKPRQK-QWTNRNALMAMP--IAGVGKGGGVLDKPVI 60
METAICGR+ALSP+ +F KPGDK + +R LM++ ++G G GGG+L+KPVI
Sbjct: 1 METAICGRIALSPNHVFNPKPGDKNSVCRGPCASRGILMSISATVSGKGGGGGILEKPVI 60
Query: 59 EKTTPGRVSEFDLRKSRKM 3
E+TTPGR SEFDLRKS+KM
Sbjct: 61 ERTTPGRESEFDLRKSKKM 79
>gb|EOY02119.1| Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein
ClpS family protein isoform 1 [Theobroma cacao]
Length = 158
Score = 92.4 bits (228), Expect = 6e-17
Identities = 47/77 (61%), Positives = 58/77 (75%), Gaps = 1/77 (1%)
Frame = -3
Query: 230 METAICGRVALSPHQIFQTKPGDKKPRQK-QWTNRNALMAMPIAGVGKGGGVLDKPVIEK 54
METAI GR+ LSP+ +F KPG+K+ K TNR LMA+ G G+G GVL+KPVIE+
Sbjct: 1 METAIRGRLTLSPNTVFNPKPGEKQSLCKGPCTNRGILMAISTTGAGRGAGVLEKPVIER 60
Query: 53 TTPGRVSEFDLRKSRKM 3
TTPGR SEFD+RKSRK+
Sbjct: 61 TTPGRESEFDVRKSRKI 77
>ref|XP_006302940.1| hypothetical protein CARUB_v10021079mg [Capsella rubella]
gi|482571650|gb|EOA35838.1| hypothetical protein
CARUB_v10021079mg [Capsella rubella]
Length = 159
Score = 92.4 bits (228), Expect = 6e-17
Identities = 48/78 (61%), Positives = 57/78 (73%), Gaps = 2/78 (2%)
Frame = -3
Query: 230 METAICGRVALSPHQIFQTKPGDKKPRQK-QWTNRNALMAMPI-AGVGKGGGVLDKPVIE 57
M+T ICGR+AL+P +F +K GDK K NR LM + A +GKGGGVLDKP+IE
Sbjct: 1 MDTTICGRLALAPSTLFSSKSGDKHSLSKGPCLNRGVLMTLSTSAALGKGGGVLDKPIIE 60
Query: 56 KTTPGRVSEFDLRKSRKM 3
KTTPGR SEFDLRKS+KM
Sbjct: 61 KTTPGRESEFDLRKSKKM 78
>emb|CBI27053.3| unnamed protein product [Vitis vinifera]
Length = 127
Score = 90.1 bits (222), Expect = 3e-16
Identities = 48/77 (62%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Frame = -3
Query: 230 METAICGRVALSPHQIFQTKPGDKKPRQK-QWTNRNALMAMPIAGVGKGGGVLDKPVIEK 54
ME AICGR+ALSP+ +F +K GDK K TNR+ LMA+ +G GKGG +L++PVIEK
Sbjct: 1 MENAICGRLALSPNHVFNSKSGDKHSLLKGPCTNRSFLMAISASGPGKGG-LLERPVIEK 59
Query: 53 TTPGRVSEFDLRKSRKM 3
TPGR SEFDLRKSRK+
Sbjct: 60 VTPGRESEFDLRKSRKI 76
>ref|XP_002281884.1| PREDICTED: ATP-dependent Clp protease adapter protein ClpS [Vitis
vinifera] gi|147853628|emb|CAN80233.1| hypothetical
protein VITISV_037190 [Vitis vinifera]
Length = 157
Score = 90.1 bits (222), Expect = 3e-16
Identities = 48/77 (62%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Frame = -3
Query: 230 METAICGRVALSPHQIFQTKPGDKKPRQK-QWTNRNALMAMPIAGVGKGGGVLDKPVIEK 54
ME AICGR+ALSP+ +F +K GDK K TNR+ LMA+ +G GKGG +L++PVIEK
Sbjct: 1 MENAICGRLALSPNHVFNSKSGDKHSLLKGPCTNRSFLMAISASGPGKGG-LLERPVIEK 59
Query: 53 TTPGRVSEFDLRKSRKM 3
TPGR SEFDLRKSRK+
Sbjct: 60 VTPGRESEFDLRKSRKI 76
>gb|EMJ10924.1| hypothetical protein PRUPE_ppa012720mg [Prunus persica]
Length = 157
Score = 87.4 bits (215), Expect = 2e-15
Identities = 47/74 (63%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Frame = -3
Query: 221 AICGRVALSPHQIFQ-TKPGDKKPRQKQWTNRNALMAMPIAGVGKGGGVLDKPVIEKTTP 45
AICGRVALSP+Q F K GDK KQ ++R+ LM +GKGGG+L+KP IEKTTP
Sbjct: 3 AICGRVALSPNQGFNLAKSGDKHYFHKQCSSRSILMTASSTRLGKGGGLLEKPTIEKTTP 62
Query: 44 GRVSEFDLRKSRKM 3
R SEFDLRKSRKM
Sbjct: 63 SRDSEFDLRKSRKM 76
>ref|XP_006838422.1| hypothetical protein AMTR_s00002p00109470 [Amborella trichopoda]
gi|548840928|gb|ERN00991.1| hypothetical protein
AMTR_s00002p00109470 [Amborella trichopoda]
Length = 158
Score = 86.3 bits (212), Expect = 4e-15
Identities = 44/76 (57%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
Frame = -3
Query: 230 METAICGRVALSPHQIFQTKPGDKKPRQK-QWTNRNALMAMPIAGVGKGGGVLDKPVIEK 54
METAICGR+ LS +Q+ K GDK K NR +M + +G GKGGG+L++P IEK
Sbjct: 1 METAICGRITLSANQLLNPKSGDKLLLLKGTCPNRGTIMMVSASGPGKGGGLLERPTIEK 60
Query: 53 TTPGRVSEFDLRKSRK 6
T+PGR SEFDLRKSRK
Sbjct: 61 TSPGRESEFDLRKSRK 76
>ref|XP_004299231.1| PREDICTED: ATP-dependent Clp protease adapter protein ClpS-like
[Fragaria vesca subsp. vesca]
Length = 158
Score = 85.1 bits (209), Expect = 9e-15
Identities = 44/75 (58%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
Frame = -3
Query: 221 AICGRVALSPHQIFQTKP--GDKKPRQKQWTNRNALMAMPIAGVGKGGGVLDKPVIEKTT 48
A+CGRV LSP Q+F GDK KQ NR+ +M +GKGGG+L+KP IEKTT
Sbjct: 3 ALCGRVPLSPTQVFNLSKSGGDKPYFHKQCPNRSTVMTATTTVLGKGGGLLEKPTIEKTT 62
Query: 47 PGRVSEFDLRKSRKM 3
PGR SEFDLRKS+KM
Sbjct: 63 PGRDSEFDLRKSKKM 77
>ref|XP_006484424.1| PREDICTED: uncharacterized protein LOC102625837 isoform X2 [Citrus
sinensis]
Length = 156
Score = 83.6 bits (205), Expect = 3e-14
Identities = 44/76 (57%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
Frame = -3
Query: 230 METAICGRVALSPHQIFQTKPGDKKPR-QKQWTNRNALMAMPIAGVGKGGGVLDKPVIEK 54
METAICGR+ALSPH +F +KPGDK NR+ LM + + GKGGG+L++PVI
Sbjct: 1 METAICGRLALSPHTVFNSKPGDKSLLCGGSCINRSVLMTVLASAPGKGGGLLERPVI-- 58
Query: 53 TTPGRVSEFDLRKSRK 6
T PGR SEFDL+K RK
Sbjct: 59 TAPGRESEFDLKKKRK 74