BLASTX nr result
ID: Atropa21_contig00004627
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00004627
(956 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004243929.1| PREDICTED: pentatricopeptide repeat-containi... 108 4e-21
ref|XP_006342394.1| PREDICTED: pentatricopeptide repeat-containi... 107 5e-21
ref|XP_002269136.1| PREDICTED: pentatricopeptide repeat-containi... 87 1e-14
gb|EMJ02980.1| hypothetical protein PRUPE_ppa001132mg [Prunus pe... 83 1e-13
gb|EOY02481.1| Pentatricopeptide repeat-containing protein, puta... 83 2e-13
gb|EPS63256.1| hypothetical protein M569_11526, partial [Genlise... 82 2e-13
ref|XP_002532584.1| pentatricopeptide repeat-containing protein,... 82 4e-13
ref|XP_004172369.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 75 4e-11
ref|XP_004144802.1| PREDICTED: pentatricopeptide repeat-containi... 75 4e-11
emb|CAN76479.1| hypothetical protein VITISV_028175 [Vitis vinifera] 75 5e-11
ref|XP_004952031.1| PREDICTED: pentatricopeptide repeat-containi... 73 1e-10
ref|XP_004291546.1| PREDICTED: pentatricopeptide repeat-containi... 70 9e-10
ref|XP_003617158.1| Pentatricopeptide repeat-containing protein ... 70 9e-10
dbj|BAD08027.1| putative pentatricopeptide (PPR) repeat-containi... 69 2e-09
ref|XP_003573904.1| PREDICTED: pentatricopeptide repeat-containi... 69 2e-09
ref|NP_001045762.2| Os02g0127600 [Oryza sativa Japonica Group] g... 69 2e-09
ref|XP_002451457.1| hypothetical protein SORBIDRAFT_04g002270 [S... 69 2e-09
gb|EEC72399.1| hypothetical protein OsI_05688 [Oryza sativa Indi... 69 2e-09
ref|XP_006648271.1| PREDICTED: pentatricopeptide repeat-containi... 69 3e-09
ref|XP_003545174.1| PREDICTED: pentatricopeptide repeat-containi... 68 6e-09
>ref|XP_004243929.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71210-like
[Solanum lycopersicum]
Length = 896
Score = 108 bits (269), Expect = 4e-21
Identities = 49/53 (92%), Positives = 51/53 (96%)
Frame = -1
Query: 956 ERLCKKGYEPNRWTYDILVHGFLKDGRPSEARRWMDEMFSKGFDLTEATKAFV 798
ERLCKKGYEPNRWTYDILVHGFLK GR SEARRWM+EMFSKGFDLTEATK+FV
Sbjct: 844 ERLCKKGYEPNRWTYDILVHGFLKVGRSSEARRWMEEMFSKGFDLTEATKSFV 896
>ref|XP_006342394.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71210-like
isoform X1 [Solanum tuberosum]
gi|565350891|ref|XP_006342395.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g71210-like isoform X2 [Solanum tuberosum]
Length = 895
Score = 107 bits (268), Expect = 5e-21
Identities = 49/53 (92%), Positives = 50/53 (94%)
Frame = -1
Query: 956 ERLCKKGYEPNRWTYDILVHGFLKDGRPSEARRWMDEMFSKGFDLTEATKAFV 798
ERLCKKGYEPNRWTYDILVHGFLK GR SEARRWM+EMFSKGFDLTEATK FV
Sbjct: 843 ERLCKKGYEPNRWTYDILVHGFLKVGRSSEARRWMEEMFSKGFDLTEATKTFV 895
>ref|XP_002269136.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71210-like [Vitis vinifera]
Length = 881
Score = 86.7 bits (213), Expect = 1e-14
Identities = 36/52 (69%), Positives = 43/52 (82%)
Frame = -1
Query: 953 RLCKKGYEPNRWTYDILVHGFLKDGRPSEARRWMDEMFSKGFDLTEATKAFV 798
R+C+KGYEPNRWTYDILVHG K GR SEA +W++EMF KGF+ TEATK +
Sbjct: 830 RICQKGYEPNRWTYDILVHGLFKHGRTSEANKWVEEMFCKGFEPTEATKLLI 881
>gb|EMJ02980.1| hypothetical protein PRUPE_ppa001132mg [Prunus persica]
Length = 899
Score = 83.2 bits (204), Expect = 1e-13
Identities = 35/52 (67%), Positives = 42/52 (80%)
Frame = -1
Query: 953 RLCKKGYEPNRWTYDILVHGFLKDGRPSEARRWMDEMFSKGFDLTEATKAFV 798
++C+KGYEPNRWTYD LV GFLK GR SEARRW++ M+ KGF TE TK F+
Sbjct: 848 KICQKGYEPNRWTYDTLVQGFLKHGRTSEARRWLEVMYRKGFHPTERTKLFI 899
>gb|EOY02481.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
cacao]
Length = 885
Score = 82.8 bits (203), Expect = 2e-13
Identities = 34/51 (66%), Positives = 41/51 (80%)
Frame = -1
Query: 950 LCKKGYEPNRWTYDILVHGFLKDGRPSEARRWMDEMFSKGFDLTEATKAFV 798
+C+KGYEPNRWTYDI+VH L+ GR EA RW++EMF KGFDLTE TK +
Sbjct: 835 ICQKGYEPNRWTYDIIVHSLLRKGRRDEASRWVEEMFRKGFDLTENTKLLI 885
>gb|EPS63256.1| hypothetical protein M569_11526, partial [Genlisea aurea]
Length = 816
Score = 82.4 bits (202), Expect = 2e-13
Identities = 33/50 (66%), Positives = 45/50 (90%)
Frame = -1
Query: 956 ERLCKKGYEPNRWTYDILVHGFLKDGRPSEARRWMDEMFSKGFDLTEATK 807
+R+ ++GY PNRWTYDI+VHGF+KDGR +EA+ W+++M S+GFDLTEATK
Sbjct: 766 DRMIQRGYVPNRWTYDIIVHGFVKDGRITEAKSWIEKMISRGFDLTEATK 815
>ref|XP_002532584.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223527693|gb|EEF29801.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 895
Score = 81.6 bits (200), Expect = 4e-13
Identities = 34/53 (64%), Positives = 42/53 (79%)
Frame = -1
Query: 956 ERLCKKGYEPNRWTYDILVHGFLKDGRPSEARRWMDEMFSKGFDLTEATKAFV 798
+R+C+KGYEPN WTYDILVHG K+GR EARRW+DEMF KGF + TK+ +
Sbjct: 843 DRICQKGYEPNHWTYDILVHGLFKNGRIGEARRWVDEMFRKGFSPSGRTKSLM 895
>ref|XP_004172369.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g71210-like, partial [Cucumis sativus]
Length = 889
Score = 75.1 bits (183), Expect = 4e-11
Identities = 32/53 (60%), Positives = 40/53 (75%)
Frame = -1
Query: 956 ERLCKKGYEPNRWTYDILVHGFLKDGRPSEARRWMDEMFSKGFDLTEATKAFV 798
+RLC+KGY PN+WTYDILVHG K GR EA+R ++ M KGF LTE T+A +
Sbjct: 828 DRLCEKGYVPNKWTYDILVHGLFKQGRTVEAKRLLEIMHKKGFSLTECTQALI 880
>ref|XP_004144802.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71210-like
[Cucumis sativus]
Length = 913
Score = 75.1 bits (183), Expect = 4e-11
Identities = 32/53 (60%), Positives = 40/53 (75%)
Frame = -1
Query: 956 ERLCKKGYEPNRWTYDILVHGFLKDGRPSEARRWMDEMFSKGFDLTEATKAFV 798
+RLC+KGY PN+WTYDILVHG K GR EA+R ++ M KGF LTE T+A +
Sbjct: 852 DRLCEKGYVPNKWTYDILVHGLFKQGRTVEAKRLLEIMHKKGFSLTECTQALI 904
>emb|CAN76479.1| hypothetical protein VITISV_028175 [Vitis vinifera]
Length = 1173
Score = 74.7 bits (182), Expect = 5e-11
Identities = 30/41 (73%), Positives = 35/41 (85%)
Frame = -1
Query: 953 RLCKKGYEPNRWTYDILVHGFLKDGRPSEARRWMDEMFSKG 831
R+C+KGYEPNRWTYDILVHG K GR SEA +W++EMF KG
Sbjct: 830 RICQKGYEPNRWTYDILVHGLFKHGRTSEANKWVEEMFCKG 870
>ref|XP_004952031.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71210-like [Setaria italica]
Length = 914
Score = 73.2 bits (178), Expect = 1e-10
Identities = 28/43 (65%), Positives = 36/43 (83%)
Frame = -1
Query: 956 ERLCKKGYEPNRWTYDILVHGFLKDGRPSEARRWMDEMFSKGF 828
ER+C+KGY+PNRWT+DI+VHGF K+G +EA RWMD M+ GF
Sbjct: 846 ERMCRKGYQPNRWTFDIMVHGFCKNGDRNEAERWMDAMYRNGF 888
>ref|XP_004291546.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71210-like [Fragaria vesca subsp. vesca]
Length = 630
Score = 70.5 bits (171), Expect = 9e-10
Identities = 31/51 (60%), Positives = 35/51 (68%)
Frame = -1
Query: 953 RLCKKGYEPNRWTYDILVHGFLKDGRPSEARRWMDEMFSKGFDLTEATKAF 801
R+ +KGYEPNRWTYDILV GFLK GR EA W+ M+ KGF TE F
Sbjct: 579 RMSQKGYEPNRWTYDILVQGFLKHGRTDEANLWLKAMYEKGFSPTEQRMRF 629
>ref|XP_003617158.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518493|gb|AET00117.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 978
Score = 70.5 bits (171), Expect = 9e-10
Identities = 27/49 (55%), Positives = 39/49 (79%)
Frame = -1
Query: 953 RLCKKGYEPNRWTYDILVHGFLKDGRPSEARRWMDEMFSKGFDLTEATK 807
R+C++G +PN WTYD +V GFL GR EA++W++EM KGFDLT++T+
Sbjct: 830 RMCQRGCKPNGWTYDFMVRGFLNHGRNDEAKQWVEEMHQKGFDLTDSTR 878
>dbj|BAD08027.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 903
Score = 69.3 bits (168), Expect = 2e-09
Identities = 28/43 (65%), Positives = 33/43 (76%)
Frame = -1
Query: 956 ERLCKKGYEPNRWTYDILVHGFLKDGRPSEARRWMDEMFSKGF 828
ERLC+KGYEPNRWT+DI+VHGF K+ EA RWM+ M GF
Sbjct: 835 ERLCRKGYEPNRWTFDIMVHGFCKNSDRDEAERWMEAMHRNGF 877
>ref|XP_003573904.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71210-like isoform 1 [Brachypodium distachyon]
gi|357146190|ref|XP_003573905.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g71210-like isoform 2 [Brachypodium distachyon]
Length = 905
Score = 69.3 bits (168), Expect = 2e-09
Identities = 26/43 (60%), Positives = 34/43 (79%)
Frame = -1
Query: 956 ERLCKKGYEPNRWTYDILVHGFLKDGRPSEARRWMDEMFSKGF 828
ERLC+KGY+PNRWT+D +VHGF + G +EA RWM+ M+ GF
Sbjct: 836 ERLCRKGYQPNRWTFDTMVHGFCRHGNRNEAERWMEAMYRNGF 878
>ref|NP_001045762.2| Os02g0127600 [Oryza sativa Japonica Group]
gi|255670569|dbj|BAF07676.2| Os02g0127600 [Oryza sativa
Japonica Group]
Length = 886
Score = 69.3 bits (168), Expect = 2e-09
Identities = 28/43 (65%), Positives = 33/43 (76%)
Frame = -1
Query: 956 ERLCKKGYEPNRWTYDILVHGFLKDGRPSEARRWMDEMFSKGF 828
ERLC+KGYEPNRWT+DI+VHGF K+ EA RWM+ M GF
Sbjct: 818 ERLCRKGYEPNRWTFDIMVHGFCKNSDRDEAERWMEAMHRNGF 860
>ref|XP_002451457.1| hypothetical protein SORBIDRAFT_04g002270 [Sorghum bicolor]
gi|241931288|gb|EES04433.1| hypothetical protein
SORBIDRAFT_04g002270 [Sorghum bicolor]
Length = 917
Score = 69.3 bits (168), Expect = 2e-09
Identities = 26/43 (60%), Positives = 35/43 (81%)
Frame = -1
Query: 956 ERLCKKGYEPNRWTYDILVHGFLKDGRPSEARRWMDEMFSKGF 828
ER+C++GY+PNRWT+DI+VHGF K G +EA RWMD ++ GF
Sbjct: 849 ERICRQGYQPNRWTFDIIVHGFCKIGDKNEAERWMDALYRNGF 891
>gb|EEC72399.1| hypothetical protein OsI_05688 [Oryza sativa Indica Group]
Length = 831
Score = 69.3 bits (168), Expect = 2e-09
Identities = 28/43 (65%), Positives = 33/43 (76%)
Frame = -1
Query: 956 ERLCKKGYEPNRWTYDILVHGFLKDGRPSEARRWMDEMFSKGF 828
ERLC+KGYEPNRWT+DI+VHGF K+ EA RWM+ M GF
Sbjct: 763 ERLCRKGYEPNRWTFDIMVHGFCKNSDRDEAERWMEAMHRNGF 805
>ref|XP_006648271.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71210-like, partial [Oryza brachyantha]
Length = 784
Score = 68.9 bits (167), Expect = 3e-09
Identities = 26/43 (60%), Positives = 34/43 (79%)
Frame = -1
Query: 956 ERLCKKGYEPNRWTYDILVHGFLKDGRPSEARRWMDEMFSKGF 828
E+LC+KGYEPNRWT+DI++HG+ K+G EA RWM+ M GF
Sbjct: 716 EKLCRKGYEPNRWTFDIMIHGYCKNGDRDEAERWMEAMHRNGF 758
>ref|XP_003545174.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71210-like isoform X1 [Glycine max]
gi|571507027|ref|XP_006595790.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g71210-like isoform X2 [Glycine max]
gi|571507030|ref|XP_006595791.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g71210-like isoform X3 [Glycine max]
gi|571507034|ref|XP_006595792.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g71210-like isoform X4 [Glycine max]
gi|571507038|ref|XP_006595793.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g71210-like isoform X5 [Glycine max]
Length = 868
Score = 67.8 bits (164), Expect = 6e-09
Identities = 27/42 (64%), Positives = 34/42 (80%)
Frame = -1
Query: 953 RLCKKGYEPNRWTYDILVHGFLKDGRPSEARRWMDEMFSKGF 828
R+C++GY+PN WTYDI+V GF GR EARRW++EMF KGF
Sbjct: 822 RMCQRGYQPNCWTYDIMVRGFSIHGRKHEARRWLEEMFRKGF 863