BLASTX nr result

ID: Atropa21_contig00004430 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00004430
         (825 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006343255.1| PREDICTED: uncharacterized ATP-dependent hel...   437   e-120
ref|XP_006343253.1| PREDICTED: uncharacterized ATP-dependent hel...   428   e-117
ref|XP_004234259.1| PREDICTED: uncharacterized ATP-dependent hel...   416   e-114

>ref|XP_006343255.1| PREDICTED: uncharacterized ATP-dependent helicase C23E6.02-like
            isoform X3 [Solanum tuberosum]
          Length = 1316

 Score =  437 bits (1123), Expect = e-120
 Identities = 217/274 (79%), Positives = 236/274 (86%)
 Frame = +1

Query: 4    YTYSFLKQDAPNNLDFEMMSHNDKMLNVMDEQLDHTTGIADSDIGIACGNWTTRAGEGIQ 183
            +TYS+LKQ APNNL+FEM+SHNDKMLNVMDEQLDHT+GIADSD GIACGNWTTRAGEG+Q
Sbjct: 224  HTYSYLKQVAPNNLNFEMLSHNDKMLNVMDEQLDHTSGIADSDTGIACGNWTTRAGEGVQ 283

Query: 184  QAPECHMTPNFGVGEFSAYYSGGNQTLLNSGSLFSRLAGSNTMGKIFPQPLPCNQSSLVF 363
            QAPECHMTPNFGVG FSAYY+GGNQTLLNSG+LFSR  GSN MGKIFPQ LPCNQSS +F
Sbjct: 284  QAPECHMTPNFGVGNFSAYYNGGNQTLLNSGNLFSRSTGSNNMGKIFPQALPCNQSSYLF 343

Query: 364  QNQQFHRRNDKNELIGAADMPKVSELSNSFSPAPVTSLSSNNLLVYPKDENDALQYNRPS 543
            QNQQF R N+KNEL+G AD P VSEL+NSF PAPVTSLSSN+LLVYPKDEN  LQYNRP 
Sbjct: 344  QNQQFCRSNEKNELLGGADKPTVSELANSFCPAPVTSLSSNDLLVYPKDENGVLQYNRP- 402

Query: 544  KLPFSQKNCRRSYHLDNIEETSLEKPILVPHDQQMDVKVREQSVSLSSTSVKQQLGCAKL 723
                        YHLD+ EETS EK ILVPHD   DVKVREQS+SLSSTS+KQQ GCAKL
Sbjct: 403  ------------YHLDSFEETSSEKNILVPHDHLADVKVREQSLSLSSTSMKQQFGCAKL 450

Query: 724  EKGEKRVFLKVNGSRLSTITHQGIKRSSLNQRSH 825
            EKGEKR FLKVNGSRLSTITHQGI+++SLNQ SH
Sbjct: 451  EKGEKRRFLKVNGSRLSTITHQGIQKNSLNQISH 484


>ref|XP_006343253.1| PREDICTED: uncharacterized ATP-dependent helicase C23E6.02-like
            isoform X1 [Solanum tuberosum]
            gi|565352652|ref|XP_006343254.1| PREDICTED:
            uncharacterized ATP-dependent helicase C23E6.02-like
            isoform X2 [Solanum tuberosum]
          Length = 1327

 Score =  428 bits (1101), Expect = e-117
 Identities = 217/285 (76%), Positives = 236/285 (82%), Gaps = 11/285 (3%)
 Frame = +1

Query: 4    YTYSFLKQDAPNNLDFEMMSHNDKMLNVMDEQLDHTTGIADSDIGIACGNWTTRAGEGIQ 183
            +TYS+LKQ APNNL+FEM+SHNDKMLNVMDEQLDHT+GIADSD GIACGNWTTRAGEG+Q
Sbjct: 224  HTYSYLKQVAPNNLNFEMLSHNDKMLNVMDEQLDHTSGIADSDTGIACGNWTTRAGEGVQ 283

Query: 184  QAPECHMTPNFGVGEFSAYYSGGNQTLLNSGSLFSRLAGSNTMGKIFPQPLPCNQSSLVF 363
            QAPECHMTPNFGVG FSAYY+GGNQTLLNSG+LFSR  GSN MGKIFPQ LPCNQSS +F
Sbjct: 284  QAPECHMTPNFGVGNFSAYYNGGNQTLLNSGNLFSRSTGSNNMGKIFPQALPCNQSSYLF 343

Query: 364  QNQQFHRRNDKNELIGAADMPKVSELSNSFSPAPVTSLSSN-----------NLLVYPKD 510
            QNQQF R N+KNEL+G AD P VSEL+NSF PAPVTSLSSN           +LLVYPKD
Sbjct: 344  QNQQFCRSNEKNELLGGADKPTVSELANSFCPAPVTSLSSNDLLVYPKDENGDLLVYPKD 403

Query: 511  ENDALQYNRPSKLPFSQKNCRRSYHLDNIEETSLEKPILVPHDQQMDVKVREQSVSLSST 690
            EN  LQYNRP             YHLD+ EETS EK ILVPHD   DVKVREQS+SLSST
Sbjct: 404  ENGVLQYNRP-------------YHLDSFEETSSEKNILVPHDHLADVKVREQSLSLSST 450

Query: 691  SVKQQLGCAKLEKGEKRVFLKVNGSRLSTITHQGIKRSSLNQRSH 825
            S+KQQ GCAKLEKGEKR FLKVNGSRLSTITHQGI+++SLNQ SH
Sbjct: 451  SMKQQFGCAKLEKGEKRRFLKVNGSRLSTITHQGIQKNSLNQISH 495


>ref|XP_004234259.1| PREDICTED: uncharacterized ATP-dependent helicase C23E6.02-like
           [Solanum lycopersicum]
          Length = 1267

 Score =  416 bits (1069), Expect = e-114
 Identities = 208/274 (75%), Positives = 230/274 (83%)
 Frame = +1

Query: 4   YTYSFLKQDAPNNLDFEMMSHNDKMLNVMDEQLDHTTGIADSDIGIACGNWTTRAGEGIQ 183
           + YSFLKQDAPNNL+FEM SHNDKMLNVMDEQL+HTTGIADS+ GIACGNWTTRAGE  Q
Sbjct: 174 HAYSFLKQDAPNNLNFEMPSHNDKMLNVMDEQLNHTTGIADSETGIACGNWTTRAGEEAQ 233

Query: 184 QAPECHMTPNFGVGEFSAYYSGGNQTLLNSGSLFSRLAGSNTMGKIFPQPLPCNQSSLVF 363
           QAPEC +TPNFGVG FS+YY+GGN+TLLNSG LFSRL GSN MGKIF Q LP NQSS +F
Sbjct: 234 QAPECQVTPNFGVGNFSSYYNGGNETLLNSGDLFSRLTGSNNMGKIFRQALPRNQSSYLF 293

Query: 364 QNQQFHRRNDKNELIGAADMPKVSELSNSFSPAPVTSLSSNNLLVYPKDENDALQYNRPS 543
           QNQQF R N+KNEL+G AD+P VSEL+NSF PAPVTSLSSN+LLVYPKD+N  LQYNRP 
Sbjct: 294 QNQQFCRSNEKNELLGGADIPTVSELANSFCPAPVTSLSSNDLLVYPKDQNGVLQYNRP- 352

Query: 544 KLPFSQKNCRRSYHLDNIEETSLEKPILVPHDQQMDVKVREQSVSLSSTSVKQQLGCAKL 723
                      SYHLD+ EET  EK ILVPHD   DVK+RE+SVS SSTS+KQQ GCA L
Sbjct: 353 -----------SYHLDSFEETCSEKNILVPHDHLADVKIREKSVSSSSTSMKQQFGCANL 401

Query: 724 EKGEKRVFLKVNGSRLSTITHQGIKRSSLNQRSH 825
           E+GEKR FLKVNGSRLSTITHQGI+R+SLNQRSH
Sbjct: 402 ERGEKRRFLKVNGSRLSTITHQGIQRNSLNQRSH 435


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