BLASTX nr result

ID: Atropa21_contig00004429 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00004429
         (1277 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006343255.1| PREDICTED: uncharacterized ATP-dependent hel...   625   e-176
ref|XP_006343253.1| PREDICTED: uncharacterized ATP-dependent hel...   616   e-174
ref|XP_004234259.1| PREDICTED: uncharacterized ATP-dependent hel...   596   e-168

>ref|XP_006343255.1| PREDICTED: uncharacterized ATP-dependent helicase C23E6.02-like
            isoform X3 [Solanum tuberosum]
          Length = 1316

 Score =  625 bits (1611), Expect = e-176
 Identities = 319/425 (75%), Positives = 343/425 (80%)
 Frame = -2

Query: 1276 VHSFYGGPTDWTPGQDNEWFSDRDNISRSTSSNVQQERLLLSQSTAANKLKTSGTLAAEE 1097
            VH+ YG  TDW  GQDNEWFSDRDNIS+STSSNVQQERLLLSQS A NK K+SGTLAAEE
Sbjct: 126  VHNLYGSLTDWALGQDNEWFSDRDNISQSTSSNVQQERLLLSQSAAENKFKSSGTLAAEE 185

Query: 1096 TSSMEVAVSSNDEHYARLSLCQSSDTLPGNWDNYAQTPHTYSFLRQDAPHNLDFEMLSHN 917
            TSSMEVAVSS+D++YARL LCQSSD LPGNWDNYAQ  HTYS+L+Q AP+NL+FEMLSHN
Sbjct: 186  TSSMEVAVSSDDQYYARLGLCQSSDALPGNWDNYAQPSHTYSYLKQVAPNNLNFEMLSHN 245

Query: 916  DKMLNAMDEQFDHATGIADSDIGIACGNWTTRAGEGIQQAPECQMTPNFGVGEFSAYYSG 737
            DKMLN MDEQ DH +GIADSD GIACGNWTTRAGEG+QQAPEC MTPNFGVG FSAYY+G
Sbjct: 246  DKMLNVMDEQLDHTSGIADSDTGIACGNWTTRAGEGVQQAPECHMTPNFGVGNFSAYYNG 305

Query: 736  SNQTLLNSGSLFSRSAGSNTMGKIFPQRLPCXXXXXXXXXXXFHRRNDKNELIGAADMPT 557
             NQTLLNSG+LFSRS GSN MGKIFPQ LPC           F R N+KNEL+G AD PT
Sbjct: 306  GNQTLLNSGNLFSRSTGSNNMGKIFPQALPCNQSSYLFQNQQFCRSNEKNELLGGADKPT 365

Query: 556  VSELSNSFCLAPVTSLSCNNQLGYPKDENDVLQYNRPSKLPLSQKNYRPSYHFDNIEETS 377
            VSEL+NSFC APVTSLS N+ L YPKDEN VLQYNRP             YH D+ EETS
Sbjct: 366  VSELANSFCPAPVTSLSSNDLLVYPKDENGVLQYNRP-------------YHLDSFEETS 412

Query: 376  LEKPILVPHDQQVDVKVREQSVSLSSTSVKQQFGCAKLEKGEKRVFLKVNGSRLSTITHQ 197
             EK ILVPHD   DVKVREQS+SLSSTS+KQQFGCAKLEKGEKR FLKVNGSRLSTITHQ
Sbjct: 413  SEKNILVPHDHLADVKVREQSLSLSSTSMKQQFGCAKLEKGEKRRFLKVNGSRLSTITHQ 472

Query: 196  GIKRSSLNQRSHXXXXXXXXXXXXXSAPAKTNPCANGKSLVALQRTTITDSFTPAEVGQM 17
            GI+++SLNQ SH             SAPAK NPCANGKSLVALQRTTITDSF PAEVGQ 
Sbjct: 473  GIQKNSLNQISHSEDDDDLCILEDISAPAKANPCANGKSLVALQRTTITDSFAPAEVGQK 532

Query: 16   RPEVG 2
            R EVG
Sbjct: 533  RFEVG 537


>ref|XP_006343253.1| PREDICTED: uncharacterized ATP-dependent helicase C23E6.02-like
            isoform X1 [Solanum tuberosum]
            gi|565352652|ref|XP_006343254.1| PREDICTED:
            uncharacterized ATP-dependent helicase C23E6.02-like
            isoform X2 [Solanum tuberosum]
          Length = 1327

 Score =  616 bits (1589), Expect = e-174
 Identities = 317/426 (74%), Positives = 343/426 (80%), Gaps = 1/426 (0%)
 Frame = -2

Query: 1276 VHSFYGGPTDWTPGQDNEWFSDRDNISRSTSSNVQQERLLLSQSTAANKLKTSGTLAAEE 1097
            VH+ YG  TDW  GQDNEWFSDRDNIS+STSSNVQQERLLLSQS A NK K+SGTLAAEE
Sbjct: 126  VHNLYGSLTDWALGQDNEWFSDRDNISQSTSSNVQQERLLLSQSAAENKFKSSGTLAAEE 185

Query: 1096 TSSMEVAVSSNDEHYARLSLCQSSDTLPGNWDNYAQTPHTYSFLRQDAPHNLDFEMLSHN 917
            TSSMEVAVSS+D++YARL LCQSSD LPGNWDNYAQ  HTYS+L+Q AP+NL+FEMLSHN
Sbjct: 186  TSSMEVAVSSDDQYYARLGLCQSSDALPGNWDNYAQPSHTYSYLKQVAPNNLNFEMLSHN 245

Query: 916  DKMLNAMDEQFDHATGIADSDIGIACGNWTTRAGEGIQQAPECQMTPNFGVGEFSAYYSG 737
            DKMLN MDEQ DH +GIADSD GIACGNWTTRAGEG+QQAPEC MTPNFGVG FSAYY+G
Sbjct: 246  DKMLNVMDEQLDHTSGIADSDTGIACGNWTTRAGEGVQQAPECHMTPNFGVGNFSAYYNG 305

Query: 736  SNQTLLNSGSLFSRSAGSNTMGKIFPQRLPCXXXXXXXXXXXFHRRNDKNELIGAADMPT 557
             NQTLLNSG+LFSRS GSN MGKIFPQ LPC           F R N+KNEL+G AD PT
Sbjct: 306  GNQTLLNSGNLFSRSTGSNNMGKIFPQALPCNQSSYLFQNQQFCRSNEKNELLGGADKPT 365

Query: 556  VSELSNSFCLAPVTSLSCNNQLGYPKDEN-DVLQYNRPSKLPLSQKNYRPSYHFDNIEET 380
            VSEL+NSFC APVTSLS N+ L YPKDEN D+L Y +     L    Y   YH D+ EET
Sbjct: 366  VSELANSFCPAPVTSLSSNDLLVYPKDENGDLLVYPKDENGVL---QYNRPYHLDSFEET 422

Query: 379  SLEKPILVPHDQQVDVKVREQSVSLSSTSVKQQFGCAKLEKGEKRVFLKVNGSRLSTITH 200
            S EK ILVPHD   DVKVREQS+SLSSTS+KQQFGCAKLEKGEKR FLKVNGSRLSTITH
Sbjct: 423  SSEKNILVPHDHLADVKVREQSLSLSSTSMKQQFGCAKLEKGEKRRFLKVNGSRLSTITH 482

Query: 199  QGIKRSSLNQRSHXXXXXXXXXXXXXSAPAKTNPCANGKSLVALQRTTITDSFTPAEVGQ 20
            QGI+++SLNQ SH             SAPAK NPCANGKSLVALQRTTITDSF PAEVGQ
Sbjct: 483  QGIQKNSLNQISHSEDDDDLCILEDISAPAKANPCANGKSLVALQRTTITDSFAPAEVGQ 542

Query: 19   MRPEVG 2
             R EVG
Sbjct: 543  KRFEVG 548


>ref|XP_004234259.1| PREDICTED: uncharacterized ATP-dependent helicase C23E6.02-like
            [Solanum lycopersicum]
          Length = 1267

 Score =  596 bits (1537), Expect = e-168
 Identities = 305/425 (71%), Positives = 335/425 (78%)
 Frame = -2

Query: 1276 VHSFYGGPTDWTPGQDNEWFSDRDNISRSTSSNVQQERLLLSQSTAANKLKTSGTLAAEE 1097
            VH+FYG  TDW  GQDNEWFSDRDNIS+STSSNVQQERLLLSQS A NK K+SGTLAA+E
Sbjct: 76   VHNFYGSLTDWRLGQDNEWFSDRDNISQSTSSNVQQERLLLSQSAAENKFKSSGTLAAKE 135

Query: 1096 TSSMEVAVSSNDEHYARLSLCQSSDTLPGNWDNYAQTPHTYSFLRQDAPHNLDFEMLSHN 917
            TSSMEVAVSS D++Y+RL LCQSSD LPG WDNYAQ  H YSFL+QDAP+NL+FEM SHN
Sbjct: 136  TSSMEVAVSSADQYYSRLGLCQSSDALPGTWDNYAQPSHAYSFLKQDAPNNLNFEMPSHN 195

Query: 916  DKMLNAMDEQFDHATGIADSDIGIACGNWTTRAGEGIQQAPECQMTPNFGVGEFSAYYSG 737
            DKMLN MDEQ +H TGIADS+ GIACGNWTTRAGE  QQAPECQ+TPNFGVG FS+YY+G
Sbjct: 196  DKMLNVMDEQLNHTTGIADSETGIACGNWTTRAGEEAQQAPECQVTPNFGVGNFSSYYNG 255

Query: 736  SNQTLLNSGSLFSRSAGSNTMGKIFPQRLPCXXXXXXXXXXXFHRRNDKNELIGAADMPT 557
             N+TLLNSG LFSR  GSN MGKIF Q LP            F R N+KNEL+G AD+PT
Sbjct: 256  GNETLLNSGDLFSRLTGSNNMGKIFRQALPRNQSSYLFQNQQFCRSNEKNELLGGADIPT 315

Query: 556  VSELSNSFCLAPVTSLSCNNQLGYPKDENDVLQYNRPSKLPLSQKNYRPSYHFDNIEETS 377
            VSEL+NSFC APVTSLS N+ L YPKD+N VLQYN            RPSYH D+ EET 
Sbjct: 316  VSELANSFCPAPVTSLSSNDLLVYPKDQNGVLQYN------------RPSYHLDSFEETC 363

Query: 376  LEKPILVPHDQQVDVKVREQSVSLSSTSVKQQFGCAKLEKGEKRVFLKVNGSRLSTITHQ 197
             EK ILVPHD   DVK+RE+SVS SSTS+KQQFGCA LE+GEKR FLKVNGSRLSTITHQ
Sbjct: 364  SEKNILVPHDHLADVKIREKSVSSSSTSMKQQFGCANLERGEKRRFLKVNGSRLSTITHQ 423

Query: 196  GIKRSSLNQRSHXXXXXXXXXXXXXSAPAKTNPCANGKSLVALQRTTITDSFTPAEVGQM 17
            GI+R+SLNQRSH             SAPAK NPCANGKSLV LQRTTITDSF PA+VGQ 
Sbjct: 424  GIQRNSLNQRSHSEDDDDLCILEDISAPAKANPCANGKSLVVLQRTTITDSFAPADVGQK 483

Query: 16   RPEVG 2
            R EVG
Sbjct: 484  RFEVG 488


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