BLASTX nr result
ID: Atropa21_contig00004356
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00004356
(526 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004230024.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 291 8e-77
gb|AAY89359.1| RNA polymerase IV largest subunit [Solanum lycope... 291 8e-77
emb|CBI40152.3| unnamed protein product [Vitis vinifera] 173 2e-41
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E sub... 173 2e-41
ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citr... 168 8e-40
ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E sub... 167 2e-39
ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 167 2e-39
gb|EMJ20080.1| hypothetical protein PRUPE_ppa000088mg [Prunus pe... 164 9e-39
ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V sub... 163 2e-38
ref|XP_002513060.1| DNA-directed RNA polymerase, putative [Ricin... 162 4e-38
gb|EPS67715.1| hypothetical protein M569_07058, partial [Genlise... 160 2e-37
gb|EOY19811.1| DNA-directed RNA polymerase E subunit 1, putative... 159 3e-37
gb|EOY19809.1| DNA-directed RNA polymerase E subunit 1, putative... 159 3e-37
ref|XP_002299208.2| DNA-directed RNA polymerase alpha subunit fa... 159 4e-37
ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E sub... 155 4e-36
ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Popu... 155 7e-36
gb|AAX12374.1| DNA-directed RNA polymerase alpha subunit [Spinac... 152 6e-35
gb|EXB62675.1| DNA-directed RNA polymerase E subunit 1 [Morus no... 145 4e-33
ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V sub... 144 9e-33
ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase V sub... 141 1e-31
>ref|XP_004230024.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E subunit
1 [Solanum lycopersicum]
Length = 1632
Score = 291 bits (744), Expect = 8e-77
Identities = 143/175 (81%), Positives = 153/175 (87%)
Frame = +1
Query: 1 FSTYFFHTXXXXXXXXXXXXXXPDPALVDVRKSGTIWTALQILGTALPDGFDSCGETHTI 180
FS YFF PD A+VDVRKSG +WT LQILG ALPDGFDSCGETHTI
Sbjct: 504 FSHYFFDKAAAQQLAMFLPMALPDSAVVDVRKSGAMWTTLQILGAALPDGFDSCGETHTI 563
Query: 181 RKSQFLGIEYNRDLISSIINDVITSVYFMKGPNDVLKFFNSLQPLLMENLCSEGFSISLR 360
KSQFLGI+Y+RDLISSI+NDVITS+YFMKGPNDVLKFFNSLQPLLMENLC+EGFSISLR
Sbjct: 564 GKSQFLGIDYHRDLISSILNDVITSIYFMKGPNDVLKFFNSLQPLLMENLCTEGFSISLR 623
Query: 361 DFYMSKAVRDGIQERIQCMSKLLHHLRASYNESVEVQLEHHLRNEKLPVMDFVLK 525
DFYM+KAVRDGIQERIQCMSKLLHHLR+SYNESVEVQLEHHLRNEKLPV+DFVLK
Sbjct: 624 DFYMTKAVRDGIQERIQCMSKLLHHLRSSYNESVEVQLEHHLRNEKLPVIDFVLK 678
>gb|AAY89359.1| RNA polymerase IV largest subunit [Solanum lycopersicum]
Length = 1127
Score = 291 bits (744), Expect = 8e-77
Identities = 143/175 (81%), Positives = 153/175 (87%)
Frame = +1
Query: 1 FSTYFFHTXXXXXXXXXXXXXXPDPALVDVRKSGTIWTALQILGTALPDGFDSCGETHTI 180
FS YFF PD A+VDVRKSG +WT LQILG ALPDGFDSCGETHTI
Sbjct: 55 FSHYFFDKAAAQQLAMFLPMALPDSAVVDVRKSGAMWTTLQILGAALPDGFDSCGETHTI 114
Query: 181 RKSQFLGIEYNRDLISSIINDVITSVYFMKGPNDVLKFFNSLQPLLMENLCSEGFSISLR 360
KSQFLGI+Y+RDLISSI+NDVITS+YFMKGPNDVLKFFNSLQPLLMENLC+EGFSISLR
Sbjct: 115 GKSQFLGIDYHRDLISSILNDVITSIYFMKGPNDVLKFFNSLQPLLMENLCTEGFSISLR 174
Query: 361 DFYMSKAVRDGIQERIQCMSKLLHHLRASYNESVEVQLEHHLRNEKLPVMDFVLK 525
DFYM+KAVRDGIQERIQCMSKLLHHLR+SYNESVEVQLEHHLRNEKLPV+DFVLK
Sbjct: 175 DFYMTKAVRDGIQERIQCMSKLLHHLRSSYNESVEVQLEHHLRNEKLPVIDFVLK 229
>emb|CBI40152.3| unnamed protein product [Vitis vinifera]
Length = 1890
Score = 173 bits (438), Expect = 2e-41
Identities = 86/174 (49%), Positives = 117/174 (67%)
Frame = +1
Query: 1 FSTYFFHTXXXXXXXXXXXXXXPDPALVDVRKSGTIWTALQILGTALPDGFDSCGETHTI 180
F YF + P PAL+ SG WTALQIL TALP FD GE H I
Sbjct: 563 FERYFLNKAAAQQLVMFVSMSLPRPALLKSPCSGPCWTALQILQTALPSYFDCIGERHWI 622
Query: 181 RKSQFLGIEYNRDLISSIINDVITSVYFMKGPNDVLKFFNSLQPLLMENLCSEGFSISLR 360
KS L ++YNRD++ S++N+++TS++ KGPN+VLKFF+SLQPLLMENL SEGFS+SL
Sbjct: 623 SKSAILKVDYNRDVLQSLVNEIVTSIFSEKGPNEVLKFFDSLQPLLMENLFSEGFSVSLE 682
Query: 361 DFYMSKAVRDGIQERIQCMSKLLHHLRASYNESVEVQLEHHLRNEKLPVMDFVL 522
DF + V IQ+ ++ +S LL++LR+ YNE +++Q E+HLR K+PV +F+L
Sbjct: 683 DFSIPSEVTQNIQKNVEDISSLLYNLRSMYNELLQLQAENHLRLTKVPVANFIL 736
>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E subunit 1 [Vitis vinifera]
Length = 1830
Score = 173 bits (438), Expect = 2e-41
Identities = 86/174 (49%), Positives = 117/174 (67%)
Frame = +1
Query: 1 FSTYFFHTXXXXXXXXXXXXXXPDPALVDVRKSGTIWTALQILGTALPDGFDSCGETHTI 180
F YF + P PAL+ SG WTALQIL TALP FD GE H I
Sbjct: 503 FERYFLNKAAAQQLVMFVSMSLPRPALLKSPCSGPCWTALQILQTALPSYFDCIGERHWI 562
Query: 181 RKSQFLGIEYNRDLISSIINDVITSVYFMKGPNDVLKFFNSLQPLLMENLCSEGFSISLR 360
KS L ++YNRD++ S++N+++TS++ KGPN+VLKFF+SLQPLLMENL SEGFS+SL
Sbjct: 563 SKSAILKVDYNRDVLQSLVNEIVTSIFSEKGPNEVLKFFDSLQPLLMENLFSEGFSVSLE 622
Query: 361 DFYMSKAVRDGIQERIQCMSKLLHHLRASYNESVEVQLEHHLRNEKLPVMDFVL 522
DF + V IQ+ ++ +S LL++LR+ YNE +++Q E+HLR K+PV +F+L
Sbjct: 623 DFSIPSEVTQNIQKNVEDISSLLYNLRSMYNELLQLQAENHLRLTKVPVANFIL 676
>ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citrus clementina]
gi|557522591|gb|ESR33958.1| hypothetical protein
CICLE_v10004129mg [Citrus clementina]
Length = 1867
Score = 168 bits (425), Expect = 8e-40
Identities = 83/175 (47%), Positives = 117/175 (66%)
Frame = +1
Query: 1 FSTYFFHTXXXXXXXXXXXXXXPDPALVDVRKSGTIWTALQILGTALPDGFDSCGETHTI 180
F YF P PAL SG WTALQIL + LP GFDSCG+ + I
Sbjct: 505 FKKYFLDKAFAQQLAMFALSPLPRPALSKAHCSGPRWTALQILQSVLPPGFDSCGDRYLI 564
Query: 181 RKSQFLGIEYNRDLISSIINDVITSVYFMKGPNDVLKFFNSLQPLLMENLCSEGFSISLR 360
+KS+ L +++RD I S+IN+++TS++F KGP +VL+FF+SLQPLLMENL ++GFS+SL
Sbjct: 565 KKSEVLNGDFDRDTIPSVINEIVTSIFFEKGPEEVLEFFDSLQPLLMENLFADGFSVSLE 624
Query: 361 DFYMSKAVRDGIQERIQCMSKLLHHLRASYNESVEVQLEHHLRNEKLPVMDFVLK 525
DF +SKA IQ+ IQ + LL+H ++ NE V++Q+E+H+R+ K+ V F+LK
Sbjct: 625 DFSLSKAALWNIQKEIQALYSLLYHRMSTQNELVDLQIENHIRHVKMLVAKFILK 679
>ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cucumis
sativus]
Length = 1959
Score = 167 bits (422), Expect = 2e-39
Identities = 79/153 (51%), Positives = 113/153 (73%)
Frame = +1
Query: 67 PDPALVDVRKSGTIWTALQILGTALPDGFDSCGETHTIRKSQFLGIEYNRDLISSIINDV 246
P PAL+ VR WTALQIL T LP FD G+++ I+ S FL +++RD + S+IN++
Sbjct: 525 PPPALLGVRSGSLHWTALQILQTVLPASFDCHGDSYLIKNSNFLKFDFDRDAMPSLINEI 584
Query: 247 ITSVYFMKGPNDVLKFFNSLQPLLMENLCSEGFSISLRDFYMSKAVRDGIQERIQCMSKL 426
+TS++F KGP +VLKFF+SLQPLLME++ SEGFS+ L D+ M A +Q+ IQ +S L
Sbjct: 585 LTSIFFQKGPEEVLKFFDSLQPLLMEHIFSEGFSVGLDDYSMPMAFLQALQKNIQVLSPL 644
Query: 427 LHHLRASYNESVEVQLEHHLRNEKLPVMDFVLK 525
L+ LR+++NE VE+QLE+HLR+ K+P +F+LK
Sbjct: 645 LYQLRSTFNELVELQLENHLRSVKVPFTNFILK 677
>ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E subunit
1-like [Cucumis sativus]
Length = 2019
Score = 167 bits (422), Expect = 2e-39
Identities = 79/153 (51%), Positives = 113/153 (73%)
Frame = +1
Query: 67 PDPALVDVRKSGTIWTALQILGTALPDGFDSCGETHTIRKSQFLGIEYNRDLISSIINDV 246
P PAL+ VR WTALQIL T LP FD G+++ I+ S FL +++RD + S+IN++
Sbjct: 555 PPPALLGVRSGSLHWTALQILQTVLPASFDCHGDSYLIKNSNFLKFDFDRDAMPSLINEI 614
Query: 247 ITSVYFMKGPNDVLKFFNSLQPLLMENLCSEGFSISLRDFYMSKAVRDGIQERIQCMSKL 426
+TS++F KGP +VLKFF+SLQPLLME++ SEGFS+ L D+ M A +Q+ IQ +S L
Sbjct: 615 LTSIFFQKGPEEVLKFFDSLQPLLMEHIFSEGFSVGLDDYSMPMAFLQALQKNIQVLSPL 674
Query: 427 LHHLRASYNESVEVQLEHHLRNEKLPVMDFVLK 525
L+ LR+++NE VE+QLE+HLR+ K+P +F+LK
Sbjct: 675 LYQLRSTFNELVELQLENHLRSVKVPFTNFILK 707
>gb|EMJ20080.1| hypothetical protein PRUPE_ppa000088mg [Prunus persica]
Length = 1855
Score = 164 bits (416), Expect = 9e-39
Identities = 82/175 (46%), Positives = 113/175 (64%)
Frame = +1
Query: 1 FSTYFFHTXXXXXXXXXXXXXXPDPALVDVRKSGTIWTALQILGTALPDGFDSCGETHTI 180
F YF P PAL+ + + WTA QIL TALP FD G+ + +
Sbjct: 506 FKKYFLDKAAAQQLAMFASSSLPRPALLKANSAHSYWTAFQILQTALPAHFDCSGDNYLV 565
Query: 181 RKSQFLGIEYNRDLISSIINDVITSVYFMKGPNDVLKFFNSLQPLLMENLCSEGFSISLR 360
KS+ L I+++ +++++ND+ TSV+F KG DVLKFF+SLQPLLMENL SEGFS+ L
Sbjct: 566 NKSEILNIDFSTSSVAAVMNDIATSVFFEKGGEDVLKFFDSLQPLLMENLFSEGFSVGLE 625
Query: 361 DFYMSKAVRDGIQERIQCMSKLLHHLRASYNESVEVQLEHHLRNEKLPVMDFVLK 525
DFYMS+ IQ+ IQ S LL+HLR++YNE VE QL++ +R+ K+PV F+L+
Sbjct: 626 DFYMSRTSIQDIQKNIQDSSDLLYHLRSTYNEFVEFQLQNRIRSVKVPVSHFILE 680
>ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Citrus
sinensis]
Length = 1865
Score = 163 bits (413), Expect = 2e-38
Identities = 83/175 (47%), Positives = 117/175 (66%)
Frame = +1
Query: 1 FSTYFFHTXXXXXXXXXXXXXXPDPALVDVRKSGTIWTALQILGTALPDGFDSCGETHTI 180
F YF P PAL R S WTALQIL + LP GFDSCG+ + I
Sbjct: 505 FKKYFLDKAFTQQLAMFALSPLPRPALSKARCSAR-WTALQILQSVLPPGFDSCGDRYLI 563
Query: 181 RKSQFLGIEYNRDLISSIINDVITSVYFMKGPNDVLKFFNSLQPLLMENLCSEGFSISLR 360
+KS+ L +++RD I S+IN+++TS++F KGP +VL+FF+SLQPLLMENL ++GFS+SL
Sbjct: 564 KKSEVLKGDFDRDTIPSVINEIVTSIFFEKGPEEVLEFFDSLQPLLMENLFADGFSVSLE 623
Query: 361 DFYMSKAVRDGIQERIQCMSKLLHHLRASYNESVEVQLEHHLRNEKLPVMDFVLK 525
DF +SKA IQ+ IQ + LL+H ++ NE V++Q+E+H+R+ K+ V F+LK
Sbjct: 624 DFSLSKAALWNIQKEIQALYSLLYHRMSTQNELVDLQIENHIRHVKMLVAKFILK 678
>ref|XP_002513060.1| DNA-directed RNA polymerase, putative [Ricinus communis]
gi|223548071|gb|EEF49563.1| DNA-directed RNA polymerase,
putative [Ricinus communis]
Length = 991
Score = 162 bits (410), Expect = 4e-38
Identities = 77/153 (50%), Positives = 109/153 (71%)
Frame = +1
Query: 67 PDPALVDVRKSGTIWTALQILGTALPDGFDSCGETHTIRKSQFLGIEYNRDLISSIINDV 246
P PAL S IWTALQIL TALP FD GE + I + + ++++RD++ ++IND+
Sbjct: 528 PQPALWKAHCSVPIWTALQILQTALPSQFDCSGERYLISNTDIVKVDFSRDVVQAVINDI 587
Query: 247 ITSVYFMKGPNDVLKFFNSLQPLLMENLCSEGFSISLRDFYMSKAVRDGIQERIQCMSKL 426
+ S++F KGP+ V KFFNSLQPLLME+L SEGFS+ L DFY+S+A G + + +S L
Sbjct: 588 VISMFFEKGPDAVFKFFNSLQPLLMESLFSEGFSVGLEDFYISRAAIGGTRRDFKVISSL 647
Query: 427 LHHLRASYNESVEVQLEHHLRNEKLPVMDFVLK 525
L LR++YNE + +QLE+H+R KLPV DF+++
Sbjct: 648 LSQLRSTYNELMALQLENHIRRAKLPVADFIVR 680
>gb|EPS67715.1| hypothetical protein M569_07058, partial [Genlisea aurea]
Length = 1379
Score = 160 bits (405), Expect = 2e-37
Identities = 77/150 (51%), Positives = 112/150 (74%)
Frame = +1
Query: 73 PALVDVRKSGTIWTALQILGTALPDGFDSCGETHTIRKSQFLGIEYNRDLISSIINDVIT 252
PA+V K G +WTA QIL LP F GE H I KS+ L ++ +RDL+++++ND++T
Sbjct: 527 PAVVK-SKIGPLWTASQILQATLPSSFGCSGERHLIAKSEVLNLDVDRDLMTAVVNDLVT 585
Query: 253 SVYFMKGPNDVLKFFNSLQPLLMENLCSEGFSISLRDFYMSKAVRDGIQERIQCMSKLLH 432
S++F+KGP DVL FFNS+QPLLME+L +EGFS+SL+DF++ + V +GI+E IQ +S LL
Sbjct: 586 SLFFLKGPKDVLGFFNSVQPLLMESLQAEGFSVSLKDFFLPREVLEGIRENIQKISPLLS 645
Query: 433 HLRASYNESVEVQLEHHLRNEKLPVMDFVL 522
HLR Y+ES+ +QLE +L + K PV +F++
Sbjct: 646 HLRDHYSESIALQLESYLSSVKTPVTEFIV 675
>gb|EOY19811.1| DNA-directed RNA polymerase E subunit 1, putative isoform 3
[Theobroma cacao]
Length = 1675
Score = 159 bits (403), Expect = 3e-37
Identities = 78/152 (51%), Positives = 109/152 (71%)
Frame = +1
Query: 67 PDPALVDVRKSGTIWTALQILGTALPDGFDSCGETHTIRKSQFLGIEYNRDLISSIINDV 246
P PA + G WTALQIL TA P D G+ + I KS L ++++RDL+ S+IN+V
Sbjct: 526 PQPAFLKGNSFGPCWTALQILQTAFPACLDCSGDRYLISKSDILTVDFSRDLMQSVINEV 585
Query: 247 ITSVYFMKGPNDVLKFFNSLQPLLMENLCSEGFSISLRDFYMSKAVRDGIQERIQCMSKL 426
+TS++F KGP +VL FF+SLQPLLMEN+ +EGFS+SL DF +S+ V IQ+ IQ +S L
Sbjct: 586 VTSIFFEKGPKEVLNFFDSLQPLLMENVFAEGFSVSLEDFSVSREVIQNIQKDIQDISPL 645
Query: 427 LHHLRASYNESVEVQLEHHLRNEKLPVMDFVL 522
L+ LR++YNE V +Q+E+H+R K PV +F+L
Sbjct: 646 LYQLRSTYNELVGLQMENHIRVAKAPVANFIL 677
>gb|EOY19809.1| DNA-directed RNA polymerase E subunit 1, putative isoform 1
[Theobroma cacao] gi|508727913|gb|EOY19810.1|
DNA-directed RNA polymerase E subunit 1, putative
isoform 1 [Theobroma cacao]
Length = 1788
Score = 159 bits (403), Expect = 3e-37
Identities = 78/152 (51%), Positives = 109/152 (71%)
Frame = +1
Query: 67 PDPALVDVRKSGTIWTALQILGTALPDGFDSCGETHTIRKSQFLGIEYNRDLISSIINDV 246
P PA + G WTALQIL TA P D G+ + I KS L ++++RDL+ S+IN+V
Sbjct: 526 PQPAFLKGNSFGPCWTALQILQTAFPACLDCSGDRYLISKSDILTVDFSRDLMQSVINEV 585
Query: 247 ITSVYFMKGPNDVLKFFNSLQPLLMENLCSEGFSISLRDFYMSKAVRDGIQERIQCMSKL 426
+TS++F KGP +VL FF+SLQPLLMEN+ +EGFS+SL DF +S+ V IQ+ IQ +S L
Sbjct: 586 VTSIFFEKGPKEVLNFFDSLQPLLMENVFAEGFSVSLEDFSVSREVIQNIQKDIQDISPL 645
Query: 427 LHHLRASYNESVEVQLEHHLRNEKLPVMDFVL 522
L+ LR++YNE V +Q+E+H+R K PV +F+L
Sbjct: 646 LYQLRSTYNELVGLQMENHIRVAKAPVANFIL 677
>ref|XP_002299208.2| DNA-directed RNA polymerase alpha subunit family protein [Populus
trichocarpa] gi|550346661|gb|EEE84013.2| DNA-directed
RNA polymerase alpha subunit family protein [Populus
trichocarpa]
Length = 842
Score = 159 bits (402), Expect = 4e-37
Identities = 78/152 (51%), Positives = 112/152 (73%)
Frame = +1
Query: 67 PDPALVDVRKSGTIWTALQILGTALPDGFDSCGETHTIRKSQFLGIEYNRDLISSIINDV 246
P PAL+ V WTA QIL ALP F+ GE I S L +++NRD+++S+IN++
Sbjct: 445 PQPALLKVNCIRPYWTAHQILQMALPTCFNCSGERFLINNSNVLKVDFNRDVVASMINEI 504
Query: 247 ITSVYFMKGPNDVLKFFNSLQPLLMENLCSEGFSISLRDFYMSKAVRDGIQERIQCMSKL 426
+ S++F KG VLKFFN+LQPLLMENL SEGFS+SL+DF +S+AV+ IQE + +S L
Sbjct: 505 LISIFFEKGSGAVLKFFNALQPLLMENLFSEGFSVSLKDFSISQAVKQSIQESFKVISPL 564
Query: 427 LHHLRASYNESVEVQLEHHLRNEKLPVMDFVL 522
L +LR++YNE VE+Q+E+H+++ K PV++F+L
Sbjct: 565 LCNLRSTYNELVELQVENHIQDVKTPVLEFIL 596
>ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Fragaria
vesca subsp. vesca]
Length = 1991
Score = 155 bits (393), Expect = 4e-36
Identities = 80/174 (45%), Positives = 109/174 (62%)
Frame = +1
Query: 1 FSTYFFHTXXXXXXXXXXXXXXPDPALVDVRKSGTIWTALQILGTALPDGFDSCGETHTI 180
F YFF+ P PAL+ + WTALQIL TALP F S G+ H +
Sbjct: 502 FKKYFFNKAAMQQLAMFVSSSLPQPALLKANSTVPCWTALQILQTALPAQFQSSGDRHLV 561
Query: 181 RKSQFLGIEYNRDLISSIINDVITSVYFMKGPNDVLKFFNSLQPLLMENLCSEGFSISLR 360
+ S+ L ++ + L+ S+IND+ TS++F K DVL FFNS+QPLLMENL SEGFS+ L
Sbjct: 562 KDSEVLLLDCSTSLVPSLINDIGTSIFFEKSAEDVLSFFNSMQPLLMENLFSEGFSVGLE 621
Query: 361 DFYMSKAVRDGIQERIQCMSKLLHHLRASYNESVEVQLEHHLRNEKLPVMDFVL 522
DF + +A IQ+ ++ +S LL H+R YNE VE+QLE+H+R K PV +F+L
Sbjct: 622 DFALPRASIQDIQKGLKEISPLLFHMRTVYNELVEMQLENHIRKVKEPVSNFIL 675
>ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Populus trichocarpa]
gi|550343552|gb|EEE78905.2| hypothetical protein
POPTR_0003s19630g [Populus trichocarpa]
Length = 1920
Score = 155 bits (391), Expect = 7e-36
Identities = 78/152 (51%), Positives = 110/152 (72%)
Frame = +1
Query: 67 PDPALVDVRKSGTIWTALQILGTALPDGFDSCGETHTIRKSQFLGIEYNRDLISSIINDV 246
P PAL+ V WTA QIL ALP F+ GE I S FL +++NRD+++S+IN++
Sbjct: 531 PQPALLKVNCFFPHWTAHQILQMALPACFNCSGERFLIINSNFLKVDFNRDVVASVINEI 590
Query: 247 ITSVYFMKGPNDVLKFFNSLQPLLMENLCSEGFSISLRDFYMSKAVRDGIQERIQCMSKL 426
+ S++F KG VLKFFNSLQP+LMENL SEGFS+SL DF +S+AV+ I E + +S L
Sbjct: 591 LISMFFEKGSGAVLKFFNSLQPMLMENLFSEGFSVSLEDFSISRAVKQRIPESFKAISPL 650
Query: 427 LHHLRASYNESVEVQLEHHLRNEKLPVMDFVL 522
L +LR+++NE VE+Q+E+H+R+ K PV +F+L
Sbjct: 651 LCNLRSTFNELVELQVENHIRDVKQPVREFIL 682
>gb|AAX12374.1| DNA-directed RNA polymerase alpha subunit [Spinacia oleracea]
Length = 1902
Score = 152 bits (383), Expect = 6e-35
Identities = 82/184 (44%), Positives = 109/184 (59%), Gaps = 10/184 (5%)
Frame = +1
Query: 1 FSTYFFHTXXXXXXXXXXXXXXPDPAL----------VDVRKSGTIWTALQILGTALPDG 150
F YF P PAL SG WTA Q+L TALP
Sbjct: 294 FEVYFLDRASANQLAMYASSLLPSPALWKACSSNAKKKKAHSSGPRWTAQQVLQTALPSH 353
Query: 151 FDSCGETHTIRKSQFLGIEYNRDLISSIINDVITSVYFMKGPNDVLKFFNSLQPLLMENL 330
F+ G+ I S+ L +++NRD+++S+I+DV+TS++F K P D L FF+SLQPLLMENL
Sbjct: 354 FECHGDRLLIHDSEILKLDFNRDIVASVISDVLTSLFFNKSPKDALDFFDSLQPLLMENL 413
Query: 331 CSEGFSISLRDFYMSKAVRDGIQERIQCMSKLLHHLRASYNESVEVQLEHHLRNEKLPVM 510
SEGFS+SL DF+ K+ IQ IQ +S LL LR+S+NE V+VQ E+H+R K PV
Sbjct: 414 FSEGFSVSLHDFFFPKSELQNIQRNIQDLSPLLLQLRSSFNELVQVQFENHIREFKSPVG 473
Query: 511 DFVL 522
+F+L
Sbjct: 474 NFIL 477
>gb|EXB62675.1| DNA-directed RNA polymerase E subunit 1 [Morus notabilis]
Length = 2054
Score = 145 bits (367), Expect = 4e-33
Identities = 78/175 (44%), Positives = 106/175 (60%)
Frame = +1
Query: 1 FSTYFFHTXXXXXXXXXXXXXXPDPALVDVRKSGTIWTALQILGTALPDGFDSCGETHTI 180
F TYF P PA WTALQ+L TALP D G+ I
Sbjct: 509 FKTYFMDKIAAQQLVMFASSSLPQPAFWLTHSGDPFWTALQVLQTALPTSLDCYGDRFLI 568
Query: 181 RKSQFLGIEYNRDLISSIINDVITSVYFMKGPNDVLKFFNSLQPLLMENLCSEGFSISLR 360
+ S L +++NRD+ S+IND+ S+ KG +VLKFFN+LQPLLMEN+ ++GFS+ L
Sbjct: 569 KGSDILVLDFNRDV--SVINDIGASICSEKGSEEVLKFFNALQPLLMENIFAQGFSVGLE 626
Query: 361 DFYMSKAVRDGIQERIQCMSKLLHHLRASYNESVEVQLEHHLRNEKLPVMDFVLK 525
DF +S+ V I + IQ +S LL+HLR++YNE VE+QLE+ +R K PV +F+LK
Sbjct: 627 DFSISQEVIKNITKDIQLISPLLYHLRSTYNELVELQLENQIRFAKAPVTNFILK 681
>ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Glycine
max]
Length = 2082
Score = 144 bits (364), Expect = 9e-33
Identities = 70/153 (45%), Positives = 106/153 (69%)
Frame = +1
Query: 67 PDPALVDVRKSGTIWTALQILGTALPDGFDSCGETHTIRKSQFLGIEYNRDLISSIINDV 246
P PAL+ WT++QIL ALP GFD G + IR+S+ L E++RD++ + +N++
Sbjct: 529 PRPALLKASSGDACWTSIQILQCALPLGFDCTGGRYLIRQSEILEFEFSRDVLPATVNEI 588
Query: 247 ITSVYFMKGPNDVLKFFNSLQPLLMENLCSEGFSISLRDFYMSKAVRDGIQERIQCMSKL 426
SV+F KGP + L FF+ LQP LME+L +EGFS+SL +F +S+A++ I++ I +S L
Sbjct: 589 AASVFFGKGPKEALNFFDVLQPFLMESLFAEGFSVSLEEFSISRAIKRIIRKSIGKVSSL 648
Query: 427 LHHLRASYNESVEVQLEHHLRNEKLPVMDFVLK 525
L+ LR+ YNE V QLE H+R+ +LP+++F LK
Sbjct: 649 LYQLRSLYNELVAQQLEKHIRDVELPIINFALK 681
>ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Glycine
max]
Length = 2020
Score = 141 bits (355), Expect = 1e-31
Identities = 69/153 (45%), Positives = 104/153 (67%)
Frame = +1
Query: 67 PDPALVDVRKSGTIWTALQILGTALPDGFDSCGETHTIRKSQFLGIEYNRDLISSIINDV 246
P PAL+ WT++QIL ALP GFD G + IR+S+ L +++RD + + IN++
Sbjct: 529 PRPALLKASSDDACWTSIQILQGALPMGFDCTGGRYLIRQSEILEFDFSRDALPATINEI 588
Query: 247 ITSVYFMKGPNDVLKFFNSLQPLLMENLCSEGFSISLRDFYMSKAVRDGIQERIQCMSKL 426
S++F KGP + LKFF+ LQP LME+L +EGFS+SL +F +S+A++ I+ I S L
Sbjct: 589 AASIFFGKGPMEALKFFDVLQPFLMESLFAEGFSVSLEEFSISRAIKRIIRRSIGKASSL 648
Query: 427 LHHLRASYNESVEVQLEHHLRNEKLPVMDFVLK 525
L+ LR+ YNE V QLE H+++ +LP+++F LK
Sbjct: 649 LYQLRSLYNELVAQQLEKHIQDVELPIINFALK 681