BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00004355
         (1194 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004230024.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   776   0.0  
gb|EPS67715.1| hypothetical protein M569_07058, partial [Genlise...   642   0.0  
ref|XP_002513060.1| DNA-directed RNA polymerase, putative [Ricin...   618   e-174
gb|EOY19811.1| DNA-directed RNA polymerase E subunit 1, putative...   616   e-174
gb|EOY19809.1| DNA-directed RNA polymerase E subunit 1, putative...   616   e-174
ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V sub...   615   e-173
ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citr...   615   e-173
emb|CBI40152.3| unnamed protein product [Vitis vinifera]              613   e-173
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E sub...   613   e-173
ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E sub...   611   e-172
gb|EMJ20080.1| hypothetical protein PRUPE_ppa000088mg [Prunus pe...   607   e-171
ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   605   e-170
ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Popu...   602   e-170
ref|XP_003627838.1| DNA-directed RNA polymerase subunit [Medicag...   593   e-167
ref|XP_004511031.1| PREDICTED: DNA-directed RNA polymerase E sub...   592   e-167
ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V sub...   586   e-165
gb|ESW05756.1| hypothetical protein PHAVU_011G206900g [Phaseolus...   585   e-164
ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase V sub...   576   e-162
ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E sub...   575   e-161
gb|EXB62675.1| DNA-directed RNA polymerase E subunit 1 [Morus no...   570   e-160

>ref|XP_004230024.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E subunit
            1 [Solanum lycopersicum]
          Length = 1632

 Score =  776 bits (2005), Expect = 0.0
 Identities = 382/396 (96%), Positives = 390/396 (98%)
 Frame = +3

Query: 3    GVLERMLSSCCEDVSQISIYEGKTSDGASYLELKVPKNAAKLPEWNFLEKYGYRYGDGYS 182
            GVLERMLSSCCEDVSQ+S+YEGKTSDGASYLELKVPKNAAKL EWNFLEKYGYRYGDGYS
Sbjct: 114  GVLERMLSSCCEDVSQVSVYEGKTSDGASYLELKVPKNAAKLQEWNFLEKYGYRYGDGYS 173

Query: 183  RPLLPSEVLTILRRIREDTRKKLSAKGYFPQDGYILQYLPVPPNCLSVPDISDGNNIMSS 362
            RPLLPSEVL ILRRIREDTRKKLSAKGYFPQ+GYILQYLPVPPNCLSVPDISDGNNIMSS
Sbjct: 174  RPLLPSEVLAILRRIREDTRKKLSAKGYFPQEGYILQYLPVPPNCLSVPDISDGNNIMSS 233

Query: 363  DHSISMLRKVLRQIDIIKSSRSGTPNFEAHEMEANDLQAAVVQYLQFRGTGKASRDVDKR 542
            DHSI+MLRKVLRQIDIIKSSRSGTPNFEAHE+EANDLQAAVVQYLQFRGTGKASRDVDKR
Sbjct: 234  DHSITMLRKVLRQIDIIKSSRSGTPNFEAHEVEANDLQAAVVQYLQFRGTGKASRDVDKR 293

Query: 543  FGIHKEAVDTTTKAWLEKMKTLFIRKGSGFSSRSVITGDSYKGVGEIGLPCEIAQKITFE 722
            FGIHKEA DTTTKAWLEKMKTLFIRKGSGFSSRSVITGD YKGVGEIGLPCEIAQKITFE
Sbjct: 294  FGIHKEAADTTTKAWLEKMKTLFIRKGSGFSSRSVITGDPYKGVGEIGLPCEIAQKITFE 353

Query: 723  ERVSQHNMAYLQKLVDEKLCLTYKDGSSTYSLREGSKGHTFLRPGQIVHRRIMDGDIVFI 902
            ERVSQHNMAYLQKLVDEKLCLTYKDGSSTYSLREGSKGHTFLRPGQIVHRRIMDGD VFI
Sbjct: 354  ERVSQHNMAYLQKLVDEKLCLTYKDGSSTYSLREGSKGHTFLRPGQIVHRRIMDGDTVFI 413

Query: 903  NRPPTTHKHSLQALSVYIHDDHTVKINPLMCGPLSADFDGDCIHLFYPQSLSAKAEVVEL 1082
            NRPPTTHKHSLQALSVY+HDDHTVKINPLMCGPLSADFDGDCIHLFYPQSLSAKAEV+EL
Sbjct: 414  NRPPTTHKHSLQALSVYVHDDHTVKINPLMCGPLSADFDGDCIHLFYPQSLSAKAEVLEL 473

Query: 1083 FSVGKQLLSSHTGNFNLQLATDSLLSLKLMFSTYFF 1190
            F+VGKQLLSSHTGNFNLQLATDSLLSLKLMFS YFF
Sbjct: 474  FAVGKQLLSSHTGNFNLQLATDSLLSLKLMFSHYFF 509


>gb|EPS67715.1| hypothetical protein M569_07058, partial [Genlisea aurea]
          Length = 1379

 Score =  642 bits (1656), Expect = 0.0
 Identities = 307/397 (77%), Positives = 361/397 (90%), Gaps = 2/397 (0%)
 Frame = +3

Query: 3    GVLERMLSSCCEDVSQISIYEGKTSDGASYLELKVPKNAAKLPE--WNFLEKYGYRYGDG 176
            G +ERML SCCE+ SQI++YE KTSDGASYLELKVP  + KL E  WNFLEK+G+RYG  
Sbjct: 113  GAMERMLMSCCEETSQITVYETKTSDGASYLELKVPPKS-KLREGYWNFLEKHGFRYGHT 171

Query: 177  YSRPLLPSEVLTILRRIREDTRKKLSAKGYFPQDGYILQYLPVPPNCLSVPDISDGNNIM 356
            YSRPLLPSEV++IL+++ ++T+K L ++GYFPQ+GY+L++LPVPPNCL VPDISDG + M
Sbjct: 172  YSRPLLPSEVMSILKKLPKETKKSLLSRGYFPQEGYVLRFLPVPPNCLCVPDISDGVSTM 231

Query: 357  SSDHSISMLRKVLRQIDIIKSSRSGTPNFEAHEMEANDLQAAVVQYLQFRGTGKASRDVD 536
            S D+SI++L+KVLRQ+++IK+SRSG PNFE+HE+EAN+LQA+V QYLQFRGTGKA+RDVD
Sbjct: 232  SKDYSITLLKKVLRQVEVIKNSRSGMPNFESHEIEANELQASVSQYLQFRGTGKAARDVD 291

Query: 537  KRFGIHKEAVDTTTKAWLEKMKTLFIRKGSGFSSRSVITGDSYKGVGEIGLPCEIAQKIT 716
             RFG+HKE   ++TKAWLEKMKTLFIRKGSGFSSRSV+TGD++KGV EIGLP EIAQKIT
Sbjct: 292  SRFGVHKEINSSSTKAWLEKMKTLFIRKGSGFSSRSVVTGDAFKGVSEIGLPYEIAQKIT 351

Query: 717  FEERVSQHNMAYLQKLVDEKLCLTYKDGSSTYSLREGSKGHTFLRPGQIVHRRIMDGDIV 896
            FEERV+ HN+ +LQKLVDEKLCLTY+DGSSTYSLREGSKGHTFL+PGQIVHRRIMDGD+ 
Sbjct: 352  FEERVNVHNIDFLQKLVDEKLCLTYRDGSSTYSLREGSKGHTFLKPGQIVHRRIMDGDLA 411

Query: 897  FINRPPTTHKHSLQALSVYIHDDHTVKINPLMCGPLSADFDGDCIHLFYPQSLSAKAEVV 1076
            FINRPPTTHKHSLQALSVY+HD HTVKINPL+CGPL+ADFDGDCIHLFYPQSL A+AEVV
Sbjct: 412  FINRPPTTHKHSLQALSVYVHDGHTVKINPLICGPLAADFDGDCIHLFYPQSLEARAEVV 471

Query: 1077 ELFSVGKQLLSSHTGNFNLQLATDSLLSLKLMFSTYF 1187
            ELFSV KQLLSSHTGNFNLQL TDSLLSLK++F  +F
Sbjct: 472  ELFSVEKQLLSSHTGNFNLQLTTDSLLSLKILFGNHF 508


>ref|XP_002513060.1| DNA-directed RNA polymerase, putative [Ricinus communis]
            gi|223548071|gb|EEF49563.1| DNA-directed RNA polymerase,
            putative [Ricinus communis]
          Length = 991

 Score =  618 bits (1594), Expect = e-174
 Identities = 306/397 (77%), Positives = 354/397 (89%), Gaps = 2/397 (0%)
 Frame = +3

Query: 3    GVLERMLSSCCEDVSQISIYEGKTSDGASYLELKVPKNAAKLPE--WNFLEKYGYRYGDG 176
            GV ER+ S CCE+ +QISI E KT+DGA  L+LK+P    +L +  WNFLE+YG+RYGD 
Sbjct: 115  GVAERLFS-CCEEAAQISIKEVKTTDGAYILQLKLPSRM-RLRDGFWNFLERYGFRYGDD 172

Query: 177  YSRPLLPSEVLTILRRIREDTRKKLSAKGYFPQDGYILQYLPVPPNCLSVPDISDGNNIM 356
             +R LLP EVL +LRRI +DTRKKL+ KGYFPQDGYI++Y+PVPPNCLSVPDISDG ++M
Sbjct: 173  ITRTLLPCEVLEMLRRIPQDTRKKLAKKGYFPQDGYIMRYVPVPPNCLSVPDISDGVSVM 232

Query: 357  SSDHSISMLRKVLRQIDIIKSSRSGTPNFEAHEMEANDLQAAVVQYLQFRGTGKASRDVD 536
            SSD SISML+KVL+Q++IIKSSRSG PNFE+HE+EA DLQ+AV QYLQ RGT K++RDV 
Sbjct: 233  SSDLSISMLKKVLKQVEIIKSSRSGEPNFESHEVEAVDLQSAVDQYLQVRGTAKSARDVG 292

Query: 537  KRFGIHKEAVDTTTKAWLEKMKTLFIRKGSGFSSRSVITGDSYKGVGEIGLPCEIAQKIT 716
            +RFG+HKE+ D++TKAWLEKM+TLFIRKGSGFSSRSVITGD+YK V EIG+P EIAQ+IT
Sbjct: 293  ERFGVHKESNDSSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKCVNEIGIPSEIAQRIT 352

Query: 717  FEERVSQHNMAYLQKLVDEKLCLTYKDGSSTYSLREGSKGHTFLRPGQIVHRRIMDGDIV 896
            FEERV+ HNM YLQ+LVD KLCLTY+DGSSTYSLREGSKGHTFLR GQIVHRRIMDGD+V
Sbjct: 353  FEERVNAHNMQYLQELVDNKLCLTYRDGSSTYSLREGSKGHTFLRLGQIVHRRIMDGDMV 412

Query: 897  FINRPPTTHKHSLQALSVYIHDDHTVKINPLMCGPLSADFDGDCIHLFYPQSLSAKAEVV 1076
            FINRPPTTHKHSLQALSVY+HD HTVKINPL+CGPLSADFDGDCIHLFYPQSL+AKAEV+
Sbjct: 413  FINRPPTTHKHSLQALSVYVHDGHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVL 472

Query: 1077 ELFSVGKQLLSSHTGNFNLQLATDSLLSLKLMFSTYF 1187
            ELFSV KQLLSSH+GN NLQL +DSLLSLK MF+TYF
Sbjct: 473  ELFSVEKQLLSSHSGNLNLQLTSDSLLSLKTMFNTYF 509


>gb|EOY19811.1| DNA-directed RNA polymerase E subunit 1, putative isoform 3
            [Theobroma cacao]
          Length = 1675

 Score =  616 bits (1588), Expect = e-174
 Identities = 303/396 (76%), Positives = 347/396 (87%), Gaps = 1/396 (0%)
 Frame = +3

Query: 6    VLERMLSSCCEDVSQISIYEGKTSDGASYLELKVPKNAAKLPEWNFLEKYGYRYGDGYS- 182
            + +R+L+SCCE+  Q+SI E KT+DGA  LELK P   A+   W FLEKYG+RYGD ++ 
Sbjct: 115  ISDRLLASCCENAPQVSIKEVKTTDGACSLELKQPSRQART-SWEFLEKYGFRYGDHHNT 173

Query: 183  RPLLPSEVLTILRRIREDTRKKLSAKGYFPQDGYILQYLPVPPNCLSVPDISDGNNIMSS 362
            R LLP EV+ IL+RI  +TR+KLS KG+FPQ+GYIL+YLPVPPNCLSVPDISDG +IMSS
Sbjct: 174  RTLLPCEVMEILKRIPAETRRKLSGKGFFPQEGYILRYLPVPPNCLSVPDISDGVSIMSS 233

Query: 363  DHSISMLRKVLRQIDIIKSSRSGTPNFEAHEMEANDLQAAVVQYLQFRGTGKASRDVDKR 542
            D S +ML+KVL+Q++IIKSSRSGTPNFE+HE+EANDLQ+AV QYLQ RGT KASR++D R
Sbjct: 234  DLSTAMLKKVLKQVEIIKSSRSGTPNFESHEVEANDLQSAVEQYLQVRGTVKASRNIDAR 293

Query: 543  FGIHKEAVDTTTKAWLEKMKTLFIRKGSGFSSRSVITGDSYKGVGEIGLPCEIAQKITFE 722
            +GI K+A D++TKAWLEKM+TLFIRKGSGFSSR VITGD YK V EIG+P EIAQ+ITFE
Sbjct: 294  YGISKDASDSSTKAWLEKMRTLFIRKGSGFSSRGVITGDPYKKVNEIGIPSEIAQRITFE 353

Query: 723  ERVSQHNMAYLQKLVDEKLCLTYKDGSSTYSLREGSKGHTFLRPGQIVHRRIMDGDIVFI 902
            ERV+ HNM YLQ LVD KLCLTY+DGSSTYSLREGSKGHTFLRPGQ+VHRRIMDGDIVFI
Sbjct: 354  ERVNMHNMRYLQNLVDNKLCLTYRDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFI 413

Query: 903  NRPPTTHKHSLQALSVYIHDDHTVKINPLMCGPLSADFDGDCIHLFYPQSLSAKAEVVEL 1082
            NRPPTTHKHSLQALSVY+HDDHTVKINPL+CGPLSADFDGDCIHLFYPQSL+AKAEV EL
Sbjct: 414  NRPPTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVFEL 473

Query: 1083 FSVGKQLLSSHTGNFNLQLATDSLLSLKLMFSTYFF 1190
            FSV KQLLSSH GN NLQLATDSLLSL++M  T  F
Sbjct: 474  FSVEKQLLSSHNGNLNLQLATDSLLSLRVMLKTLLF 509


>gb|EOY19809.1| DNA-directed RNA polymerase E subunit 1, putative isoform 1
            [Theobroma cacao] gi|508727913|gb|EOY19810.1|
            DNA-directed RNA polymerase E subunit 1, putative isoform
            1 [Theobroma cacao]
          Length = 1788

 Score =  616 bits (1588), Expect = e-174
 Identities = 303/396 (76%), Positives = 347/396 (87%), Gaps = 1/396 (0%)
 Frame = +3

Query: 6    VLERMLSSCCEDVSQISIYEGKTSDGASYLELKVPKNAAKLPEWNFLEKYGYRYGDGYS- 182
            + +R+L+SCCE+  Q+SI E KT+DGA  LELK P   A+   W FLEKYG+RYGD ++ 
Sbjct: 115  ISDRLLASCCENAPQVSIKEVKTTDGACSLELKQPSRQART-SWEFLEKYGFRYGDHHNT 173

Query: 183  RPLLPSEVLTILRRIREDTRKKLSAKGYFPQDGYILQYLPVPPNCLSVPDISDGNNIMSS 362
            R LLP EV+ IL+RI  +TR+KLS KG+FPQ+GYIL+YLPVPPNCLSVPDISDG +IMSS
Sbjct: 174  RTLLPCEVMEILKRIPAETRRKLSGKGFFPQEGYILRYLPVPPNCLSVPDISDGVSIMSS 233

Query: 363  DHSISMLRKVLRQIDIIKSSRSGTPNFEAHEMEANDLQAAVVQYLQFRGTGKASRDVDKR 542
            D S +ML+KVL+Q++IIKSSRSGTPNFE+HE+EANDLQ+AV QYLQ RGT KASR++D R
Sbjct: 234  DLSTAMLKKVLKQVEIIKSSRSGTPNFESHEVEANDLQSAVEQYLQVRGTVKASRNIDAR 293

Query: 543  FGIHKEAVDTTTKAWLEKMKTLFIRKGSGFSSRSVITGDSYKGVGEIGLPCEIAQKITFE 722
            +GI K+A D++TKAWLEKM+TLFIRKGSGFSSR VITGD YK V EIG+P EIAQ+ITFE
Sbjct: 294  YGISKDASDSSTKAWLEKMRTLFIRKGSGFSSRGVITGDPYKKVNEIGIPSEIAQRITFE 353

Query: 723  ERVSQHNMAYLQKLVDEKLCLTYKDGSSTYSLREGSKGHTFLRPGQIVHRRIMDGDIVFI 902
            ERV+ HNM YLQ LVD KLCLTY+DGSSTYSLREGSKGHTFLRPGQ+VHRRIMDGDIVFI
Sbjct: 354  ERVNMHNMRYLQNLVDNKLCLTYRDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFI 413

Query: 903  NRPPTTHKHSLQALSVYIHDDHTVKINPLMCGPLSADFDGDCIHLFYPQSLSAKAEVVEL 1082
            NRPPTTHKHSLQALSVY+HDDHTVKINPL+CGPLSADFDGDCIHLFYPQSL+AKAEV EL
Sbjct: 414  NRPPTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVFEL 473

Query: 1083 FSVGKQLLSSHTGNFNLQLATDSLLSLKLMFSTYFF 1190
            FSV KQLLSSH GN NLQLATDSLLSL++M  T  F
Sbjct: 474  FSVEKQLLSSHNGNLNLQLATDSLLSLRVMLKTLLF 509


>ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Citrus
            sinensis]
          Length = 1865

 Score =  615 bits (1585), Expect = e-173
 Identities = 302/396 (76%), Positives = 349/396 (88%), Gaps = 1/396 (0%)
 Frame = +3

Query: 3    GVLERMLSSCCEDVSQISIYEGKTSDGASYLELKVPKNAAKLPE-WNFLEKYGYRYGDGY 179
            GV +R+LSSCCE+ SQ+SI + KT+DGA YLELK+P         WNFLE+YG+RYGD  
Sbjct: 115  GVAQRLLSSCCEEASQVSIVDVKTTDGAFYLELKLPSKFRLCAGFWNFLERYGFRYGDSL 174

Query: 180  SRPLLPSEVLTILRRIREDTRKKLSAKGYFPQDGYILQYLPVPPNCLSVPDISDGNNIMS 359
            +R LL SEV  +L+RI E+TRKKL+ KGYFPQDGYIL+YLPVPPNCLSVPDISDG + MS
Sbjct: 175  TRTLLASEVKEMLKRIPEETRKKLAGKGYFPQDGYILEYLPVPPNCLSVPDISDGVSTMS 234

Query: 360  SDHSISMLRKVLRQIDIIKSSRSGTPNFEAHEMEANDLQAAVVQYLQFRGTGKASRDVDK 539
            SD SI+ML+KVL+Q++II+SSRSGTPNFE+ E+E+NDLQ AV QYL+ RGT K+SRDVD 
Sbjct: 235  SDLSIAMLKKVLKQVEIIRSSRSGTPNFESQEVESNDLQLAVGQYLEVRGTAKSSRDVDA 294

Query: 540  RFGIHKEAVDTTTKAWLEKMKTLFIRKGSGFSSRSVITGDSYKGVGEIGLPCEIAQKITF 719
            RFG+ ++  ++TTKAWLEKM+TLFIRKGSGFSSRSVITGD+YK V EIG+P EIAQ+ITF
Sbjct: 295  RFGVSQDP-NSTTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNEIGVPFEIAQRITF 353

Query: 720  EERVSQHNMAYLQKLVDEKLCLTYKDGSSTYSLREGSKGHTFLRPGQIVHRRIMDGDIVF 899
            EERV+ HN+ YLQ+LVD KLCLTY DGSS+YSLREGSKGHTFLRPGQ+VHRRIMDGD VF
Sbjct: 354  EERVNVHNINYLQELVDNKLCLTYSDGSSSYSLREGSKGHTFLRPGQVVHRRIMDGDTVF 413

Query: 900  INRPPTTHKHSLQALSVYIHDDHTVKINPLMCGPLSADFDGDCIHLFYPQSLSAKAEVVE 1079
            INRPPTTHKHSLQALSVY+HDDHTVKINPL+CGPLSADFDGDCIHLFYPQSL+AKAEV+E
Sbjct: 414  INRPPTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLE 473

Query: 1080 LFSVGKQLLSSHTGNFNLQLATDSLLSLKLMFSTYF 1187
            LFSV KQLLSSH GN NLQLATD+LLSLK+MF  YF
Sbjct: 474  LFSVEKQLLSSHNGNLNLQLATDALLSLKVMFKKYF 509


>ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citrus clementina]
            gi|557522591|gb|ESR33958.1| hypothetical protein
            CICLE_v10004129mg [Citrus clementina]
          Length = 1867

 Score =  615 bits (1585), Expect = e-173
 Identities = 302/396 (76%), Positives = 349/396 (88%), Gaps = 1/396 (0%)
 Frame = +3

Query: 3    GVLERMLSSCCEDVSQISIYEGKTSDGASYLELKVPKNAAKLPE-WNFLEKYGYRYGDGY 179
            GV +R+LSSCCE+ SQ+SI + KT+DGA YLELK+P         WNFLE+YG+RYGD  
Sbjct: 115  GVAQRLLSSCCEEASQVSIVDVKTTDGAFYLELKLPSKFRLCAGFWNFLERYGFRYGDSL 174

Query: 180  SRPLLPSEVLTILRRIREDTRKKLSAKGYFPQDGYILQYLPVPPNCLSVPDISDGNNIMS 359
            +R LL SEV  +L+RI E+TRKKL+ KGYFPQDGYIL+YLPVPPNCLSVPDISDG + MS
Sbjct: 175  TRTLLASEVKEMLKRIPEETRKKLAGKGYFPQDGYILEYLPVPPNCLSVPDISDGVSTMS 234

Query: 360  SDHSISMLRKVLRQIDIIKSSRSGTPNFEAHEMEANDLQAAVVQYLQFRGTGKASRDVDK 539
            SD SI+ML+KVL+Q++II+SSRSGTPNFE+ E+E+NDLQ AV QYL+ RGT K+SRDVD 
Sbjct: 235  SDLSIAMLKKVLKQVEIIRSSRSGTPNFESQEVESNDLQLAVGQYLEVRGTAKSSRDVDA 294

Query: 540  RFGIHKEAVDTTTKAWLEKMKTLFIRKGSGFSSRSVITGDSYKGVGEIGLPCEIAQKITF 719
            RFG+ ++  ++TTKAWLEKM+TLFIRKGSGFSSRSVITGD+YK V EIG+P EIAQ+ITF
Sbjct: 295  RFGVSQDP-NSTTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNEIGVPFEIAQRITF 353

Query: 720  EERVSQHNMAYLQKLVDEKLCLTYKDGSSTYSLREGSKGHTFLRPGQIVHRRIMDGDIVF 899
            EERV+ HN+ YLQ+LVD KLCLTY DGSS+YSLREGSKGHTFLRPGQ+VHRRIMDGD VF
Sbjct: 354  EERVNVHNINYLQELVDNKLCLTYSDGSSSYSLREGSKGHTFLRPGQVVHRRIMDGDTVF 413

Query: 900  INRPPTTHKHSLQALSVYIHDDHTVKINPLMCGPLSADFDGDCIHLFYPQSLSAKAEVVE 1079
            INRPPTTHKHSLQALSVY+HDDHTVKINPL+CGPLSADFDGDCIHLFYPQSL+AKAEV+E
Sbjct: 414  INRPPTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLE 473

Query: 1080 LFSVGKQLLSSHTGNFNLQLATDSLLSLKLMFSTYF 1187
            LFSV KQLLSSH GN NLQLATD+LLSLK+MF  YF
Sbjct: 474  LFSVEKQLLSSHNGNLNLQLATDALLSLKVMFKKYF 509


>emb|CBI40152.3| unnamed protein product [Vitis vinifera]
          Length = 1890

 Score =  613 bits (1581), Expect = e-173
 Identities = 298/398 (74%), Positives = 348/398 (87%), Gaps = 1/398 (0%)
 Frame = +3

Query: 3    GVLERMLSSCCEDVSQISIYEGKTSDGASYLELKVP-KNAAKLPEWNFLEKYGYRYGDGY 179
            G+ E++L+ CC+D  Q+S+ E + ++GA +LELK+P ++  K   W+FL +YGYRYG   
Sbjct: 172  GITEQLLAPCCQDSPQVSVREFRPTEGACFLELKIPSRSRPKDGFWDFLARYGYRYGHNL 231

Query: 180  SRPLLPSEVLTILRRIREDTRKKLSAKGYFPQDGYILQYLPVPPNCLSVPDISDGNNIMS 359
            SR LLPSEV+ ILRRI EDTRKKL  KGYFPQDGYILQYLPVPPNCLSVPDISDG +IMS
Sbjct: 232  SRILLPSEVMEILRRIPEDTRKKLVRKGYFPQDGYILQYLPVPPNCLSVPDISDGVSIMS 291

Query: 360  SDHSISMLRKVLRQIDIIKSSRSGTPNFEAHEMEANDLQAAVVQYLQFRGTGKASRDVDK 539
            SD S+SML+KVL+QI++IK SRSG PNFE+H++EAN+LQ+++ QYL+ RGT K SR +D 
Sbjct: 292  SDLSVSMLKKVLKQIEVIKGSRSGEPNFESHKIEANNLQSSIEQYLEVRGTAKTSRSLDT 351

Query: 540  RFGIHKEAVDTTTKAWLEKMKTLFIRKGSGFSSRSVITGDSYKGVGEIGLPCEIAQKITF 719
            RFG  KE  +++TKAWLEKM+TLFIRKGSGFSSRSVITGD+YK V EIGLP EIAQ+ITF
Sbjct: 352  RFGSSKEPNESSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNEIGLPFEIAQRITF 411

Query: 720  EERVSQHNMAYLQKLVDEKLCLTYKDGSSTYSLREGSKGHTFLRPGQIVHRRIMDGDIVF 899
            EERV+ HNM +LQ LVDEKLCLTY+DG STYSLREGSKGHTFLRPGQ+VHRRIMDGDIVF
Sbjct: 412  EERVNVHNMKHLQNLVDEKLCLTYRDGLSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVF 471

Query: 900  INRPPTTHKHSLQALSVYIHDDHTVKINPLMCGPLSADFDGDCIHLFYPQSLSAKAEVVE 1079
            INRPPTTHKHSLQALSVY+HDDHTVKINPL+CGPLSADFDGDC+HLFYPQSL AKAEV+E
Sbjct: 472  INRPPTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCVHLFYPQSLGAKAEVLE 531

Query: 1080 LFSVGKQLLSSHTGNFNLQLATDSLLSLKLMFSTYFFH 1193
            LFSV KQLLSSH+GN NLQLATDSLLSLK++F  YF +
Sbjct: 532  LFSVEKQLLSSHSGNLNLQLATDSLLSLKVLFERYFLN 569


>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E subunit 1 [Vitis vinifera]
          Length = 1830

 Score =  613 bits (1581), Expect = e-173
 Identities = 298/398 (74%), Positives = 348/398 (87%), Gaps = 1/398 (0%)
 Frame = +3

Query: 3    GVLERMLSSCCEDVSQISIYEGKTSDGASYLELKVP-KNAAKLPEWNFLEKYGYRYGDGY 179
            G+ E++L+ CC+D  Q+S+ E + ++GA +LELK+P ++  K   W+FL +YGYRYG   
Sbjct: 112  GITEQLLAPCCQDSPQVSVREFRPTEGACFLELKIPSRSRPKDGFWDFLARYGYRYGHNL 171

Query: 180  SRPLLPSEVLTILRRIREDTRKKLSAKGYFPQDGYILQYLPVPPNCLSVPDISDGNNIMS 359
            SR LLPSEV+ ILRRI EDTRKKL  KGYFPQDGYILQYLPVPPNCLSVPDISDG +IMS
Sbjct: 172  SRILLPSEVMEILRRIPEDTRKKLVRKGYFPQDGYILQYLPVPPNCLSVPDISDGVSIMS 231

Query: 360  SDHSISMLRKVLRQIDIIKSSRSGTPNFEAHEMEANDLQAAVVQYLQFRGTGKASRDVDK 539
            SD S+SML+KVL+QI++IK SRSG PNFE+H++EAN+LQ+++ QYL+ RGT K SR +D 
Sbjct: 232  SDLSVSMLKKVLKQIEVIKGSRSGEPNFESHKIEANNLQSSIEQYLEVRGTAKTSRSLDT 291

Query: 540  RFGIHKEAVDTTTKAWLEKMKTLFIRKGSGFSSRSVITGDSYKGVGEIGLPCEIAQKITF 719
            RFG  KE  +++TKAWLEKM+TLFIRKGSGFSSRSVITGD+YK V EIGLP EIAQ+ITF
Sbjct: 292  RFGSSKEPNESSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNEIGLPFEIAQRITF 351

Query: 720  EERVSQHNMAYLQKLVDEKLCLTYKDGSSTYSLREGSKGHTFLRPGQIVHRRIMDGDIVF 899
            EERV+ HNM +LQ LVDEKLCLTY+DG STYSLREGSKGHTFLRPGQ+VHRRIMDGDIVF
Sbjct: 352  EERVNVHNMKHLQNLVDEKLCLTYRDGLSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVF 411

Query: 900  INRPPTTHKHSLQALSVYIHDDHTVKINPLMCGPLSADFDGDCIHLFYPQSLSAKAEVVE 1079
            INRPPTTHKHSLQALSVY+HDDHTVKINPL+CGPLSADFDGDC+HLFYPQSL AKAEV+E
Sbjct: 412  INRPPTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCVHLFYPQSLGAKAEVLE 471

Query: 1080 LFSVGKQLLSSHTGNFNLQLATDSLLSLKLMFSTYFFH 1193
            LFSV KQLLSSH+GN NLQLATDSLLSLK++F  YF +
Sbjct: 472  LFSVEKQLLSSHSGNLNLQLATDSLLSLKVLFERYFLN 509


>ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cucumis
            sativus]
          Length = 1959

 Score =  611 bits (1576), Expect = e-172
 Identities = 294/396 (74%), Positives = 345/396 (87%), Gaps = 1/396 (0%)
 Frame = +3

Query: 3    GVLERMLSSCCEDVSQISIYEGKTSDGASYLELKVPKNAAKLPE-WNFLEKYGYRYGDGY 179
            G  ER+LSSCCED SQ++I E K +DGASYL+LKVP   +     W+FLE+YG+RYGD +
Sbjct: 112  GFAERLLSSCCEDASQVTIREAKKADGASYLQLKVPSRTSLQERFWDFLERYGFRYGDNF 171

Query: 180  SRPLLPSEVLTILRRIREDTRKKLSAKGYFPQDGYILQYLPVPPNCLSVPDISDGNNIMS 359
            +R LLP EV  +L++I  +TRKKL+ +GY+PQDGYILQYLPVPPNCLSVP+ISDG  +MS
Sbjct: 172  TRTLLPCEVKEMLKKIPNETRKKLAGRGYYPQDGYILQYLPVPPNCLSVPEISDGVTVMS 231

Query: 360  SDHSISMLRKVLRQIDIIKSSRSGTPNFEAHEMEANDLQAAVVQYLQFRGTGKASRDVDK 539
            SD ++SML+K+L+Q++IIK SRSG PNFE+HE+EANDLQ AV QYLQ RGT KASR +D 
Sbjct: 232  SDPAVSMLKKILKQVEIIKGSRSGAPNFESHEVEANDLQLAVDQYLQVRGTVKASRGIDA 291

Query: 540  RFGIHKEAVDTTTKAWLEKMKTLFIRKGSGFSSRSVITGDSYKGVGEIGLPCEIAQKITF 719
            RFG++KE  D +TKAWLEKM+TLFIRKGSGFSSRSVITGD+YK V EIG+P E+AQ+ITF
Sbjct: 292  RFGVNKELNDPSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKLVNEIGVPFEVAQRITF 351

Query: 720  EERVSQHNMAYLQKLVDEKLCLTYKDGSSTYSLREGSKGHTFLRPGQIVHRRIMDGDIVF 899
            EERVS HN+ YLQ+LVD+KLCLTY+DGSS YSLREGS GHT+L+PGQIVHRRIMDGDIVF
Sbjct: 352  EERVSVHNIRYLQELVDKKLCLTYRDGSSAYSLREGSMGHTYLKPGQIVHRRIMDGDIVF 411

Query: 900  INRPPTTHKHSLQALSVYIHDDHTVKINPLMCGPLSADFDGDCIHLFYPQSLSAKAEVVE 1079
            INRPPTTHKHSLQAL VY+HDDH VKINPL+CGPLSADFDGDCIHLFYPQS++AKAEV+ 
Sbjct: 412  INRPPTTHKHSLQALRVYLHDDHVVKINPLICGPLSADFDGDCIHLFYPQSIAAKAEVLG 471

Query: 1080 LFSVGKQLLSSHTGNFNLQLATDSLLSLKLMFSTYF 1187
            LFSV KQLLSSH+GN NLQLA DSLLSLK+MF  YF
Sbjct: 472  LFSVEKQLLSSHSGNLNLQLANDSLLSLKMMFRKYF 507


>gb|EMJ20080.1| hypothetical protein PRUPE_ppa000088mg [Prunus persica]
          Length = 1855

 Score =  607 bits (1564), Expect = e-171
 Identities = 292/396 (73%), Positives = 347/396 (87%), Gaps = 1/396 (0%)
 Frame = +3

Query: 3    GVLERMLSSCCEDVSQISIYEGKTSDGASYLELKVPKNAAKLPE-WNFLEKYGYRYGDGY 179
            G+ ERMLSSCCED SQ+SI E K +DG+  L+LK P  +   P  WNFLE+YG+RYGDG+
Sbjct: 115  GLAERMLSSCCEDASQVSIGEIKPTDGSCSLQLKRPSKSRTPPGFWNFLERYGFRYGDGH 174

Query: 180  SRPLLPSEVLTILRRIREDTRKKLSAKGYFPQDGYILQYLPVPPNCLSVPDISDGNNIMS 359
             R LLP EV+ +L+RI ++TRKKL+AKGYFPQDGYIL  +PVPPNCLSVP+ISDG ++MS
Sbjct: 175  IRTLLPCEVMEMLKRIPQETRKKLAAKGYFPQDGYILSQIPVPPNCLSVPEISDGVSVMS 234

Query: 360  SDHSISMLRKVLRQIDIIKSSRSGTPNFEAHEMEANDLQAAVVQYLQFRGTGKASRDVDK 539
            +D SISML+KVL+Q++II+SSRSG PNFE+  +EAN+LQA + QYLQ RGTGK SRD+D 
Sbjct: 235  ADPSISMLKKVLKQVEIIRSSRSGIPNFESQIVEANELQAIIDQYLQVRGTGKPSRDIDA 294

Query: 540  RFGIHKEAVDTTTKAWLEKMKTLFIRKGSGFSSRSVITGDSYKGVGEIGLPCEIAQKITF 719
            RFG++KE   ++TKAWLEKM+TLFIRKGSGFSSRSVITGD+++ V E+G+P EIAQ+ITF
Sbjct: 295  RFGVNKELNASSTKAWLEKMRTLFIRKGSGFSSRSVITGDAFRRVNEVGIPYEIAQRITF 354

Query: 720  EERVSQHNMAYLQKLVDEKLCLTYKDGSSTYSLREGSKGHTFLRPGQIVHRRIMDGDIVF 899
            EE+V+ HN+ YLQ+LVD KLCLTYKDGSSTYSLREGSKGHTFLRPGQ+VHRRIMDGD+VF
Sbjct: 355  EEKVNDHNIRYLQELVDSKLCLTYKDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDLVF 414

Query: 900  INRPPTTHKHSLQALSVYIHDDHTVKINPLMCGPLSADFDGDCIHLFYPQSLSAKAEVVE 1079
            +NRPPTTHKHSLQAL VY+HDDH VKINPL+CGPLSADFDGDCIHLFYPQSL+AKAEV+E
Sbjct: 415  VNRPPTTHKHSLQALQVYVHDDHVVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLE 474

Query: 1080 LFSVGKQLLSSHTGNFNLQLATDSLLSLKLMFSTYF 1187
            LFSV KQLLSSH+G  NLQLA D+LLSLK+MF  YF
Sbjct: 475  LFSVEKQLLSSHSGKPNLQLAADALLSLKMMFKKYF 510


>ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E subunit
            1-like [Cucumis sativus]
          Length = 2019

 Score =  605 bits (1560), Expect = e-170
 Identities = 292/396 (73%), Positives = 343/396 (86%), Gaps = 1/396 (0%)
 Frame = +3

Query: 3    GVLERMLSSCCEDVSQISIYEGKTSDGASYLELKVPKNAAKLPE-WNFLEKYGYRYGDGY 179
            G  ER+LSSCCED SQ++I E K +DGASYL+LKVP   +     W+FLE+YG+RYGD +
Sbjct: 142  GFAERLLSSCCEDASQVTIREAKKADGASYLQLKVPSRTSLQERFWDFLERYGFRYGDNF 201

Query: 180  SRPLLPSEVLTILRRIREDTRKKLSAKGYFPQDGYILQYLPVPPNCLSVPDISDGNNIMS 359
            +R LL   V  +L++I  +TRKKL+ +GY+PQDGYILQYLPVPPNCLSVP+ISDG  +MS
Sbjct: 202  TRTLLSVMVKEMLKKIPNETRKKLAGRGYYPQDGYILQYLPVPPNCLSVPEISDGVTVMS 261

Query: 360  SDHSISMLRKVLRQIDIIKSSRSGTPNFEAHEMEANDLQAAVVQYLQFRGTGKASRDVDK 539
            SD ++SML+K+L+Q++IIK SRSG PNFE+HE+EANDLQ AV QYLQ RGT KASR +D 
Sbjct: 262  SDPAVSMLKKILKQVEIIKGSRSGAPNFESHEVEANDLQLAVDQYLQVRGTVKASRGIDA 321

Query: 540  RFGIHKEAVDTTTKAWLEKMKTLFIRKGSGFSSRSVITGDSYKGVGEIGLPCEIAQKITF 719
            RFG++KE  D +TKAWLEKM+TLFIRKGSGFSSRSVITGD+YK V EIG+P E+AQ+ITF
Sbjct: 322  RFGVNKELNDPSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKLVNEIGVPFEVAQRITF 381

Query: 720  EERVSQHNMAYLQKLVDEKLCLTYKDGSSTYSLREGSKGHTFLRPGQIVHRRIMDGDIVF 899
            EERVS HN+ YLQ+LVD+KLCLTY+DGSS YSLREGS GHT+L+PGQIVHRRIMDGDIVF
Sbjct: 382  EERVSVHNIRYLQELVDKKLCLTYRDGSSAYSLREGSMGHTYLKPGQIVHRRIMDGDIVF 441

Query: 900  INRPPTTHKHSLQALSVYIHDDHTVKINPLMCGPLSADFDGDCIHLFYPQSLSAKAEVVE 1079
            INRPPTTHKHSLQAL VY+HDDH VKINPL+CGPLSADFDGDCIHLFYPQS++AKAEV+ 
Sbjct: 442  INRPPTTHKHSLQALRVYLHDDHVVKINPLICGPLSADFDGDCIHLFYPQSIAAKAEVLG 501

Query: 1080 LFSVGKQLLSSHTGNFNLQLATDSLLSLKLMFSTYF 1187
            LFSV KQLLSSH+GN NLQLA DSLLSLK+MF  YF
Sbjct: 502  LFSVEKQLLSSHSGNLNLQLANDSLLSLKMMFRKYF 537


>ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Populus trichocarpa]
            gi|550343552|gb|EEE78905.2| hypothetical protein
            POPTR_0003s19630g [Populus trichocarpa]
          Length = 1920

 Score =  602 bits (1553), Expect = e-170
 Identities = 300/401 (74%), Positives = 346/401 (86%), Gaps = 6/401 (1%)
 Frame = +3

Query: 3    GVLERMLSSCCE----DVSQISIYEGKTSDGASYLELKVPKNAAKLPE--WNFLEKYGYR 164
            GV ER+LS CCE    + +QISI E K +DGA +LELK+P  + +L +  WNFLE+YG+R
Sbjct: 115  GVAERLLS-CCEVSIKECAQISIREVKNTDGACFLELKLPSRS-RLRDGCWNFLERYGFR 172

Query: 165  YGDGYSRPLLPSEVLTILRRIREDTRKKLSAKGYFPQDGYILQYLPVPPNCLSVPDISDG 344
            YGD ++RPLLP EV+ IL+RI  +TRKKLS KGYFPQDGYILQ LPVPPNCLSVP +SDG
Sbjct: 173  YGDDFTRPLLPCEVMQILKRIPAETRKKLSGKGYFPQDGYILQQLPVPPNCLSVPVVSDG 232

Query: 345  NNIMSSDHSISMLRKVLRQIDIIKSSRSGTPNFEAHEMEANDLQAAVVQYLQFRGTGKAS 524
              +MSSD SISML+KVL+Q ++I+SSRSG PNF+AH+ EA  LQ+ V QYLQ RGT K S
Sbjct: 233  ITVMSSDLSISMLKKVLKQAEVIRSSRSGAPNFDAHKDEATSLQSMVDQYLQVRGTTKTS 292

Query: 525  RDVDKRFGIHKEAVDTTTKAWLEKMKTLFIRKGSGFSSRSVITGDSYKGVGEIGLPCEIA 704
            RDVD R+G+ KE+ ++TTKAWLEKM+TLFIRKGSGFSSRSVITGD+Y  V ++G+P EIA
Sbjct: 293  RDVDTRYGVKKESSESTTKAWLEKMRTLFIRKGSGFSSRSVITGDAYTLVNQVGIPYEIA 352

Query: 705  QKITFEERVSQHNMAYLQKLVDEKLCLTYKDGSSTYSLREGSKGHTFLRPGQIVHRRIMD 884
            Q+ITFEERVS HNM YLQ+LVD KLCLTYKDGSSTYSLREGSKGHTFLRPGQ+VHRRIMD
Sbjct: 353  QRITFEERVSVHNMRYLQELVDNKLCLTYKDGSSTYSLREGSKGHTFLRPGQVVHRRIMD 412

Query: 885  GDIVFINRPPTTHKHSLQALSVYIHDDHTVKINPLMCGPLSADFDGDCIHLFYPQSLSAK 1064
            GDIVFINRPPTTHKHSLQALSVY+HDDH VKINPL+CGPLSADFDGDC+HLFYPQSL+AK
Sbjct: 413  GDIVFINRPPTTHKHSLQALSVYVHDDHAVKINPLICGPLSADFDGDCVHLFYPQSLAAK 472

Query: 1065 AEVVELFSVGKQLLSSHTGNFNLQLATDSLLSLKLMFSTYF 1187
            AEV+ELFSV KQLLSSH+GN NLQL TDSLLSLK+MF   F
Sbjct: 473  AEVLELFSVEKQLLSSHSGNLNLQLTTDSLLSLKMMFKACF 513


>ref|XP_003627838.1| DNA-directed RNA polymerase subunit [Medicago truncatula]
            gi|355521860|gb|AET02314.1| DNA-directed RNA polymerase
            subunit [Medicago truncatula]
          Length = 2032

 Score =  593 bits (1528), Expect = e-167
 Identities = 282/397 (71%), Positives = 344/397 (86%), Gaps = 2/397 (0%)
 Frame = +3

Query: 3    GVLERMLSSCCEDVS--QISIYEGKTSDGASYLELKVPKNAAKLPEWNFLEKYGYRYGDG 176
            G+ +R+LS CCEDV+  Q+SI E KT+DGA YL LKV K+      W FLEKYGYRYG  
Sbjct: 197  GLAQRLLSPCCEDVNAAQVSIREVKTADGACYLALKVSKSKMHDGFWTFLEKYGYRYGGD 256

Query: 177  YSRPLLPSEVLTILRRIREDTRKKLSAKGYFPQDGYILQYLPVPPNCLSVPDISDGNNIM 356
            ++R LLP E + I++R+ ++T+KKL+ KGYFPQDGYIL+YLPVPPNCLSVP +SDG +IM
Sbjct: 257  HTRALLPCEAMEIIKRLPQETKKKLAGKGYFPQDGYILKYLPVPPNCLSVPVVSDGVSIM 316

Query: 357  SSDHSISMLRKVLRQIDIIKSSRSGTPNFEAHEMEANDLQAAVVQYLQFRGTGKASRDVD 536
            SSD ++++LRK+LR++++I+SSRSG PNFE+H++EANDLQ+ V QYLQ RGT KA+RD++
Sbjct: 317  SSDPALTILRKLLRKVEVIRSSRSGEPNFESHQVEANDLQSVVDQYLQIRGTSKAARDIE 376

Query: 537  KRFGIHKEAVDTTTKAWLEKMKTLFIRKGSGFSSRSVITGDSYKGVGEIGLPCEIAQKIT 716
              +G++KE  D++TKAWLEKM+TLFIRKGSGFSSR+VITGD YK + E+G+P E+AQ+IT
Sbjct: 377  THYGVNKELNDSSTKAWLEKMRTLFIRKGSGFSSRNVITGDGYKKINEVGIPLEVAQRIT 436

Query: 717  FEERVSQHNMAYLQKLVDEKLCLTYKDGSSTYSLREGSKGHTFLRPGQIVHRRIMDGDIV 896
            FEERVS HN+ YLQKLVDE LCLTYK+G STYSLREGSKGHT+L+PGQIVHRRIMDGD V
Sbjct: 437  FEERVSIHNIHYLQKLVDENLCLTYKEGMSTYSLREGSKGHTYLKPGQIVHRRIMDGDTV 496

Query: 897  FINRPPTTHKHSLQALSVYIHDDHTVKINPLMCGPLSADFDGDCIHLFYPQSLSAKAEVV 1076
            FINRPPTTHKHSLQAL VYIHDDHTVKINPL+CGPL ADFDGDC+HLFYPQSL+AKAEV+
Sbjct: 497  FINRPPTTHKHSLQALVVYIHDDHTVKINPLICGPLGADFDGDCVHLFYPQSLAAKAEVL 556

Query: 1077 ELFSVGKQLLSSHTGNFNLQLATDSLLSLKLMFSTYF 1187
            ELFSV KQLLSSH+GN NLQL+ DSLLSLK++  + F
Sbjct: 557  ELFSVEKQLLSSHSGNLNLQLSADSLLSLKMLVKSCF 593


>ref|XP_004511031.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cicer
            arietinum]
          Length = 2263

 Score =  592 bits (1527), Expect = e-167
 Identities = 281/397 (70%), Positives = 345/397 (86%), Gaps = 2/397 (0%)
 Frame = +3

Query: 3    GVLERMLSSCCEDVS--QISIYEGKTSDGASYLELKVPKNAAKLPEWNFLEKYGYRYGDG 176
            G+ + +LS CCEDV+  Q+SI E KT+DGA YL LKV K+      W FLEKYGYRYG  
Sbjct: 115  GLAQSLLSPCCEDVNAAQVSIREVKTADGACYLALKVSKSKMHDGFWGFLEKYGYRYGGD 174

Query: 177  YSRPLLPSEVLTILRRIREDTRKKLSAKGYFPQDGYILQYLPVPPNCLSVPDISDGNNIM 356
            ++R LLP EV+ I++R  ++T +KL+ KGYFPQDGY+L+YLPVPPNCLSVP +SDG ++M
Sbjct: 175  HTRALLPCEVMEIIKRFPQETNRKLAIKGYFPQDGYVLKYLPVPPNCLSVPVVSDGVSVM 234

Query: 357  SSDHSISMLRKVLRQIDIIKSSRSGTPNFEAHEMEANDLQAAVVQYLQFRGTGKASRDVD 536
            SSD ++++LRK+LR+++II+SSRSG PNFE+H++EANDLQ+ V QYLQ RGT KA+RD++
Sbjct: 235  SSDPAMTILRKLLRKVEIIRSSRSGEPNFESHQVEANDLQSVVDQYLQVRGTSKATRDIE 294

Query: 537  KRFGIHKEAVDTTTKAWLEKMKTLFIRKGSGFSSRSVITGDSYKGVGEIGLPCEIAQKIT 716
             R+G++KE  D++TKAWLEKM+TLFIRKGSGFSSR+VITGD YK + E+G+P E+AQ+IT
Sbjct: 295  TRYGVNKELNDSSTKAWLEKMRTLFIRKGSGFSSRNVITGDGYKKINEVGIPLEVAQRIT 354

Query: 717  FEERVSQHNMAYLQKLVDEKLCLTYKDGSSTYSLREGSKGHTFLRPGQIVHRRIMDGDIV 896
            FEERVS HN+ YLQKLVDE +CLTYK+G STYSLREGSKGHT+L+PGQIVHRRIMDGD+V
Sbjct: 355  FEERVSIHNIRYLQKLVDENMCLTYKEGVSTYSLREGSKGHTYLKPGQIVHRRIMDGDVV 414

Query: 897  FINRPPTTHKHSLQALSVYIHDDHTVKINPLMCGPLSADFDGDCIHLFYPQSLSAKAEVV 1076
            FINRPPTTHKHSLQAL VYIHDDHTVKINPL+CGPL ADFDGDC+HLFYPQSL+AKAEV+
Sbjct: 415  FINRPPTTHKHSLQALVVYIHDDHTVKINPLICGPLGADFDGDCVHLFYPQSLAAKAEVL 474

Query: 1077 ELFSVGKQLLSSHTGNFNLQLATDSLLSLKLMFSTYF 1187
            ELFSV KQLLSSH+GN NLQL+TDSLLSLK++  + F
Sbjct: 475  ELFSVEKQLLSSHSGNLNLQLSTDSLLSLKMLVKSCF 511


>ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Glycine max]
          Length = 2082

 Score =  586 bits (1510), Expect = e-165
 Identities = 279/398 (70%), Positives = 340/398 (85%), Gaps = 2/398 (0%)
 Frame = +3

Query: 3    GVLERMLSSCCED--VSQISIYEGKTSDGASYLELKVPKNAAKLPEWNFLEKYGYRYGDG 176
            G+ +R++S CC++   + +SI E KTSDGA YL LKV K+  +   W+FLEKYGYRYG  
Sbjct: 115  GLAQRLISPCCQEDKAALVSIREVKTSDGACYLALKVSKSKMQNGFWSFLEKYGYRYGGD 174

Query: 177  YSRPLLPSEVLTILRRIREDTRKKLSAKGYFPQDGYILQYLPVPPNCLSVPDISDGNNIM 356
            ++R LLP E + I++RI  +T+KKL+ KGYFPQDGY+L+YLPVPPNCLSVP++SDG ++M
Sbjct: 175  HTRALLPCEAMEIIKRIPIETKKKLAGKGYFPQDGYVLKYLPVPPNCLSVPEVSDGVSVM 234

Query: 357  SSDHSISMLRKVLRQIDIIKSSRSGTPNFEAHEMEANDLQAAVVQYLQFRGTGKASRDVD 536
            SSD SI++LRK+LR+++IIKSSRSG PNFE+H +EANDLQ+ V QY Q RGT K +RD++
Sbjct: 235  SSDPSITILRKLLRKVEIIKSSRSGEPNFESHHVEANDLQSVVDQYFQIRGTSKPARDIE 294

Query: 537  KRFGIHKEAVDTTTKAWLEKMKTLFIRKGSGFSSRSVITGDSYKGVGEIGLPCEIAQKIT 716
              FG++KE   ++TKAWLEKM+TLFIRKGSGFSSR+VITGD YK + E+G+P E+AQ+IT
Sbjct: 295  THFGVNKELTASSTKAWLEKMRTLFIRKGSGFSSRNVITGDCYKRINEVGIPVEVAQRIT 354

Query: 717  FEERVSQHNMAYLQKLVDEKLCLTYKDGSSTYSLREGSKGHTFLRPGQIVHRRIMDGDIV 896
            FEERV+ HN+ YLQKLVDE LCLTYK+G STYSLREGSKGH +L+PGQIVHRRIMDGDIV
Sbjct: 355  FEERVNIHNIRYLQKLVDEHLCLTYKEGGSTYSLREGSKGHIYLKPGQIVHRRIMDGDIV 414

Query: 897  FINRPPTTHKHSLQALSVYIHDDHTVKINPLMCGPLSADFDGDCIHLFYPQSLSAKAEVV 1076
            FINRPPTTHKHSLQAL VYIH+DHTVKINPL+CGPL ADFDGDC+HLFYPQSL+AKAEVV
Sbjct: 415  FINRPPTTHKHSLQALYVYIHEDHTVKINPLICGPLGADFDGDCVHLFYPQSLAAKAEVV 474

Query: 1077 ELFSVGKQLLSSHTGNFNLQLATDSLLSLKLMFSTYFF 1190
            ELFSV  QLLSSH+GN NLQL+TDSLLSLK++    FF
Sbjct: 475  ELFSVENQLLSSHSGNLNLQLSTDSLLSLKMLVKRCFF 512


>gb|ESW05756.1| hypothetical protein PHAVU_011G206900g [Phaseolus vulgaris]
          Length = 2052

 Score =  585 bits (1507), Expect = e-164
 Identities = 280/398 (70%), Positives = 340/398 (85%), Gaps = 2/398 (0%)
 Frame = +3

Query: 3    GVLERMLSSCCEDVS--QISIYEGKTSDGASYLELKVPKNAAKLPEWNFLEKYGYRYGDG 176
            G+ +R++S CCE+++  QISI E KTSDGA YL LKV K+      W FLEKYGYRY   
Sbjct: 115  GLAQRLVSPCCEEINAAQISIREVKTSDGACYLALKVSKSKMHPDFWGFLEKYGYRYEGD 174

Query: 177  YSRPLLPSEVLTILRRIREDTRKKLSAKGYFPQDGYILQYLPVPPNCLSVPDISDGNNIM 356
            ++R LLP E + I++RI  +T+KKL+ KGYFPQDGY+ ++LPVPPNCLSVP++SDG ++M
Sbjct: 175  HTRALLPCEAMEIIKRIPIETKKKLAGKGYFPQDGYVFKHLPVPPNCLSVPEVSDGISVM 234

Query: 357  SSDHSISMLRKVLRQIDIIKSSRSGTPNFEAHEMEANDLQAAVVQYLQFRGTGKASRDVD 536
            SSD S+++LRK+LR+++IIKSSRSG PNFE+H +EANDLQ+ V QY Q RGT KA+RD +
Sbjct: 235  SSDPSMTILRKLLRKVEIIKSSRSGEPNFESHHVEANDLQSVVEQYFQIRGTSKAARDTE 294

Query: 537  KRFGIHKEAVDTTTKAWLEKMKTLFIRKGSGFSSRSVITGDSYKGVGEIGLPCEIAQKIT 716
             RFG++KE   ++TKAWLEKM+TLFIRKGSGFSSR+VITGD YK + E+G+P E+AQ+IT
Sbjct: 295  TRFGVNKELNASSTKAWLEKMRTLFIRKGSGFSSRNVITGDCYKRINEVGIPVEVAQRIT 354

Query: 717  FEERVSQHNMAYLQKLVDEKLCLTYKDGSSTYSLREGSKGHTFLRPGQIVHRRIMDGDIV 896
            FEERV+ HN++YLQKLVDE LCLTYK+G ST+SLREGSKGH +L+PGQIVHRRIMDGDIV
Sbjct: 355  FEERVNIHNISYLQKLVDENLCLTYKEGVSTFSLREGSKGHIYLKPGQIVHRRIMDGDIV 414

Query: 897  FINRPPTTHKHSLQALSVYIHDDHTVKINPLMCGPLSADFDGDCIHLFYPQSLSAKAEVV 1076
            FINRPPTTHKHSLQAL VYIHDDHTVKINPL+CGPL ADFDGDC+HLFYPQSL+AKAEVV
Sbjct: 415  FINRPPTTHKHSLQALFVYIHDDHTVKINPLICGPLGADFDGDCVHLFYPQSLAAKAEVV 474

Query: 1077 ELFSVGKQLLSSHTGNFNLQLATDSLLSLKLMFSTYFF 1190
            ELFSV  QLLSSH+GN NLQL+TDSLLSLK++    FF
Sbjct: 475  ELFSVENQLLSSHSGNLNLQLSTDSLLSLKMLVKRCFF 512


>ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Glycine max]
          Length = 2020

 Score =  576 bits (1484), Expect = e-162
 Identities = 275/397 (69%), Positives = 337/397 (84%), Gaps = 2/397 (0%)
 Frame = +3

Query: 3    GVLERMLSSCCEDVSQ--ISIYEGKTSDGASYLELKVPKNAAKLPEWNFLEKYGYRYGDG 176
            G+ +R++S CC+DV+   +SI E KTSDGA YL LKV K+      W+FLEKYGYRY   
Sbjct: 115  GLAQRLISPCCQDVNAALVSIREVKTSDGACYLALKVSKSKIHDGFWSFLEKYGYRYEGD 174

Query: 177  YSRPLLPSEVLTILRRIREDTRKKLSAKGYFPQDGYILQYLPVPPNCLSVPDISDGNNIM 356
             +R LLP E + I++RI  +T+KKL+ KG+FPQDGY+L+YLPVPPNCLSVP++SDG ++M
Sbjct: 175  ETRALLPCEAMEIIKRIPIETKKKLAGKGFFPQDGYVLKYLPVPPNCLSVPEVSDGASVM 234

Query: 357  SSDHSISMLRKVLRQIDIIKSSRSGTPNFEAHEMEANDLQAAVVQYLQFRGTGKASRDVD 536
            SSD S+++LRK+LR+++IIKSSRSG PNFE+H +EANDLQ+ V QY Q RGT K +RD++
Sbjct: 235  SSDPSMTILRKLLRKVEIIKSSRSGEPNFESHHVEANDLQSVVDQYFQIRGTSKPARDIE 294

Query: 537  KRFGIHKEAVDTTTKAWLEKMKTLFIRKGSGFSSRSVITGDSYKGVGEIGLPCEIAQKIT 716
              FG++KE   ++TKAWLEKM+TLFIRKGSGFSSR+VITGD YK + E+G+P E+AQ+IT
Sbjct: 295  THFGVNKELTASSTKAWLEKMRTLFIRKGSGFSSRNVITGDCYKRINEVGIPVEVAQRIT 354

Query: 717  FEERVSQHNMAYLQKLVDEKLCLTYKDGSSTYSLREGSKGHTFLRPGQIVHRRIMDGDIV 896
            FEERV+ HN+ YLQKLVDE LCLTYK+G STYSLREGSKGH +L+PGQIVHRRIMDGDIV
Sbjct: 355  FEERVNIHNIRYLQKLVDEHLCLTYKEGVSTYSLREGSKGHIYLKPGQIVHRRIMDGDIV 414

Query: 897  FINRPPTTHKHSLQALSVYIHDDHTVKINPLMCGPLSADFDGDCIHLFYPQSLSAKAEVV 1076
            FINRPPTTHKHSLQAL VYIH+DHTVKINPL+CGPL ADFDGDC+HLFYPQSL+AKAEVV
Sbjct: 415  FINRPPTTHKHSLQALYVYIHEDHTVKINPLICGPLGADFDGDCVHLFYPQSLAAKAEVV 474

Query: 1077 ELFSVGKQLLSSHTGNFNLQLATDSLLSLKLMFSTYF 1187
            ELF+V  QLLSSH+GN NLQL+TDSLL+LK++    F
Sbjct: 475  ELFAVENQLLSSHSGNLNLQLSTDSLLALKMLVKRCF 511


>ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Fragaria
            vesca subsp. vesca]
          Length = 1991

 Score =  575 bits (1482), Expect = e-161
 Identities = 283/398 (71%), Positives = 335/398 (84%), Gaps = 1/398 (0%)
 Frame = +3

Query: 3    GVLERMLSSCCEDVSQISIYEGKTSDGASYLELKVPKNAAKLPE-WNFLEKYGYRYGDGY 179
            G+ ER+LS CCED +Q+SI E K  DG   L+LK+P N    P  WNFLE+YG+RYGDG 
Sbjct: 111  GLAERLLSVCCEDAAQVSITEFKPRDGVCSLQLKLPSNKKPPPGFWNFLERYGFRYGDGV 170

Query: 180  SRPLLPSEVLTILRRIREDTRKKLSAKGYFPQDGYILQYLPVPPNCLSVPDISDGNNIMS 359
             R LLP EV+ ILRRI E+T+KKL+ +GY PQDGYIL ++PVPPNCLSVP+ISDG  I+S
Sbjct: 171  KRILLPREVMQILRRIPEETKKKLATRGYNPQDGYILNHIPVPPNCLSVPEISDGVTIIS 230

Query: 360  SDHSISMLRKVLRQIDIIKSSRSGTPNFEAHEMEANDLQAAVVQYLQFRGTGKASRDVDK 539
            +D SISML+KVLR+++ I SSRSG  NFE+   E + LQ +V QYLQ RGTGKASR+ D 
Sbjct: 231  ADPSISMLKKVLRRVEEISSSRSGAANFESEIDEVDLLQESVDQYLQVRGTGKASRESDA 290

Query: 540  RFGIHKEAVDTTTKAWLEKMKTLFIRKGSGFSSRSVITGDSYKGVGEIGLPCEIAQKITF 719
            RFG  KE  +++TKAWLEKM+TLFIRKGSGFSSR+VITGD+Y+ V E+G+P +IAQ+ITF
Sbjct: 291  RFGGTKELSESSTKAWLEKMRTLFIRKGSGFSSRTVITGDAYRRVNEVGIPYDIAQRITF 350

Query: 720  EERVSQHNMAYLQKLVDEKLCLTYKDGSSTYSLREGSKGHTFLRPGQIVHRRIMDGDIVF 899
            EE+V+ HN+  LQ+LVD KLCLTY DGSSTYSLREGSKGHTFL+PGQ+VHRRIMDGD+VF
Sbjct: 351  EEKVNAHNIRRLQELVDSKLCLTYSDGSSTYSLREGSKGHTFLKPGQVVHRRIMDGDLVF 410

Query: 900  INRPPTTHKHSLQALSVYIHDDHTVKINPLMCGPLSADFDGDCIHLFYPQSLSAKAEVVE 1079
            +NRPPTTHKHSLQAL VY+H+D  VKINPL+CGPLSADFDGDCIHLFYPQSL+AKAEV+E
Sbjct: 411  VNRPPTTHKHSLQALQVYVHEDKVVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVME 470

Query: 1080 LFSVGKQLLSSHTGNFNLQLATDSLLSLKLMFSTYFFH 1193
            LFSV KQLLSSH+G  NLQLATDSLLSLKLMF  YFF+
Sbjct: 471  LFSVEKQLLSSHSGKPNLQLATDSLLSLKLMFKKYFFN 508


>gb|EXB62675.1| DNA-directed RNA polymerase E subunit 1 [Morus notabilis]
          Length = 2054

 Score =  570 bits (1470), Expect = e-160
 Identities = 290/402 (72%), Positives = 338/402 (84%), Gaps = 7/402 (1%)
 Frame = +3

Query: 3    GVLERMLSSCCEDVSQISIYEGKTSDGASYLELKVPKNAAKLPE--WNFLEKYGYRYGDG 176
            G+ E++L+SCC+D SQ+SI E K  D  S+L LKVP N  KL E  WNFLE+YG+RYG  
Sbjct: 115  GIAEQLLASCCQDASQVSIEEVK-KDTYSHLRLKVPSNK-KLHEGFWNFLERYGFRYGGS 172

Query: 177  -----YSRPLLPSEVLTILRRIREDTRKKLSAKGYFPQDGYILQYLPVPPNCLSVPDISD 341
                   R LLP EV+ I ++I E+TRKKL  KGYFPQDGYILQYLPVPPNCLSVP+ISD
Sbjct: 173  PGEELLRRTLLPCEVMEIFKKIPEETRKKLVGKGYFPQDGYILQYLPVPPNCLSVPEISD 232

Query: 342  GNNIMSSDHSISMLRKVLRQIDIIKSSRSGTPNFEAHEMEANDLQAAVVQYLQFRGTGKA 521
            G  IMS+D S SML+KVLRQ +IIKSSRS  PNFE+ E+EAN+LQ+ V QYLQ RG+ KA
Sbjct: 233  GITIMSTDPSTSMLKKVLRQGEIIKSSRS-QPNFESLEVEANELQSIVNQYLQVRGSVKA 291

Query: 522  SRDVDKRFGIHKEAVDTTTKAWLEKMKTLFIRKGSGFSSRSVITGDSYKGVGEIGLPCEI 701
            SRD+D RFG++KE  +++ K WLEKM+TLFIRKGSGFSSRSVITGD+YK V E+G+P EI
Sbjct: 292  SRDIDARFGVNKEEKNSSRKVWLEKMRTLFIRKGSGFSSRSVITGDAYKAVNEVGIPYEI 351

Query: 702  AQKITFEERVSQHNMAYLQKLVDEKLCLTYKDGSSTYSLREGSKGHTFLRPGQIVHRRIM 881
            A+ ITFEE+VS HNM YLQ+LVD KLCLTYKDGSSTYSLREGSKGHTFL+ GQ+VHRRIM
Sbjct: 352  ARWITFEEKVSSHNMKYLQELVDNKLCLTYKDGSSTYSLREGSKGHTFLKLGQVVHRRIM 411

Query: 882  DGDIVFINRPPTTHKHSLQALSVYIHDDHTVKINPLMCGPLSADFDGDCIHLFYPQSLSA 1061
            DGDIVFINRPPTTHKHSLQAL VY+H+D+TVKINPL+CGPLSADFDGDC+HLFYPQS +A
Sbjct: 412  DGDIVFINRPPTTHKHSLQALRVYVHEDNTVKINPLICGPLSADFDGDCVHLFYPQSPAA 471

Query: 1062 KAEVVELFSVGKQLLSSHTGNFNLQLATDSLLSLKLMFSTYF 1187
            KAEV+ELFS+ KQ+LSSH+G   LQLA DSLLSLK+MF TYF
Sbjct: 472  KAEVLELFSLEKQILSSHSGGMILQLACDSLLSLKIMFKTYF 513