BLASTX nr result
ID: Atropa21_contig00004293
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00004293
(468 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006353230.1| PREDICTED: membrane-associated protein VIPP1... 159 5e-37
ref|XP_004250100.1| PREDICTED: membrane-associated protein VIPP1... 156 3e-36
ref|XP_002276816.1| PREDICTED: probable membrane-associated 30 k... 100 2e-19
emb|CAN69783.1| hypothetical protein VITISV_012616 [Vitis vinifera] 88 1e-15
gb|ESW11706.1| hypothetical protein PHAVU_008G052900g [Phaseolus... 83 4e-14
ref|XP_006442841.1| hypothetical protein CICLE_v10021047mg [Citr... 82 7e-14
ref|XP_006602846.1| PREDICTED: membrane-associated protein VIPP1... 82 1e-13
ref|XP_003552456.1| PREDICTED: membrane-associated protein VIPP1... 82 1e-13
ref|XP_006478599.1| PREDICTED: membrane-associated 30 kDa protei... 81 1e-13
gb|EMJ28667.1| hypothetical protein PRUPE_ppa008331mg [Prunus pe... 80 2e-13
ref|XP_002530318.1| Membrane-associated 30 kDa protein, chloropl... 80 3e-13
ref|XP_006381404.1| hypothetical protein POPTR_0006s12560g [Popu... 79 5e-13
ref|XP_006381403.1| hypothetical protein POPTR_0006s12560g [Popu... 79 5e-13
ref|XP_004290021.1| PREDICTED: membrane-associated 30 kDa protei... 79 6e-13
gb|EXB55200.1| hypothetical protein L484_018127 [Morus notabilis] 79 8e-13
gb|EOY04733.1| Plastid transcriptionally active 4 [Theobroma cacao] 76 4e-12
ref|NP_564846.1| plastid transcriptionally active 4 [Arabidopsis... 74 3e-11
dbj|BAF00958.1| hypothetical protein [Arabidopsis thaliana] 74 3e-11
gb|EXB88153.1| hypothetical protein L484_005578 [Morus notabilis] 73 3e-11
gb|ESW12278.1| hypothetical protein PHAVU_008G0992000g, partial ... 72 6e-11
>ref|XP_006353230.1| PREDICTED: membrane-associated protein VIPP1, chloroplastic-like
[Solanum tuberosum]
Length = 330
Score = 159 bits (401), Expect = 5e-37
Identities = 80/88 (90%), Positives = 83/88 (94%)
Frame = +2
Query: 203 MAVRIPITGISMASAPSISSCNRVVVVKGPPFRASFFGQGVGALKLAGLQLTRSNRSRCN 382
MAVR PITGI+MASAPSISSCNRVVVVK PFRASFFGQGVG +KLAGLQLT SNRSRCN
Sbjct: 1 MAVRTPITGITMASAPSISSCNRVVVVKVMPFRASFFGQGVGVVKLAGLQLTHSNRSRCN 60
Query: 383 SHGGGALGARMNLFDRFARVVKSYANAV 466
SHGGGALGARMNLFDRFARVVKSYANA+
Sbjct: 61 SHGGGALGARMNLFDRFARVVKSYANAL 88
>ref|XP_004250100.1| PREDICTED: membrane-associated protein VIPP1, chloroplastic-like
[Solanum lycopersicum]
Length = 330
Score = 156 bits (394), Expect = 3e-36
Identities = 79/88 (89%), Positives = 83/88 (94%)
Frame = +2
Query: 203 MAVRIPITGISMASAPSISSCNRVVVVKGPPFRASFFGQGVGALKLAGLQLTRSNRSRCN 382
MAVR PITGI+M+SAPSISSCNRVVVVK PFRASFFGQGVGA+KLAGLQLT S RSRCN
Sbjct: 1 MAVRTPITGITMSSAPSISSCNRVVVVKVMPFRASFFGQGVGAVKLAGLQLTHSYRSRCN 60
Query: 383 SHGGGALGARMNLFDRFARVVKSYANAV 466
SHGGGALGARMNLFDRFARVVKSYANA+
Sbjct: 61 SHGGGALGARMNLFDRFARVVKSYANAL 88
>ref|XP_002276816.1| PREDICTED: probable membrane-associated 30 kDa protein,
chloroplastic [Vitis vinifera]
gi|297735245|emb|CBI17607.3| unnamed protein product
[Vitis vinifera]
Length = 324
Score = 100 bits (250), Expect = 2e-19
Identities = 51/89 (57%), Positives = 67/89 (75%), Gaps = 1/89 (1%)
Frame = +2
Query: 203 MAVRIPI-TGISMASAPSISSCNRVVVVKGPPFRASFFGQGVGALKLAGLQLTRSNRSRC 379
MA ++PI G+S+AS P S+ +V+ +++FFG GVGALK+ G+++ RS+ RC
Sbjct: 1 MATKVPIGAGLSLASPPCASNVRSLVL------KSAFFGHGVGALKVRGIRIARSSTYRC 54
Query: 380 NSHGGGALGARMNLFDRFARVVKSYANAV 466
N HGGGALG +MNLFDRFARVVKSYANAV
Sbjct: 55 NGHGGGALGTQMNLFDRFARVVKSYANAV 83
>emb|CAN69783.1| hypothetical protein VITISV_012616 [Vitis vinifera]
Length = 465
Score = 87.8 bits (216), Expect = 1e-15
Identities = 46/82 (56%), Positives = 58/82 (70%)
Frame = +2
Query: 221 ITGISMASAPSISSCNRVVVVKGPPFRASFFGQGVGALKLAGLQLTRSNRSRCNSHGGGA 400
ITG+ +ASAP+ S+ + V VV P +SFF GV LK+ G + SN S+C+ HG A
Sbjct: 8 ITGMPLASAPASSTSDSVCVVX-QPLTSSFFNGGVRVLKVRGTXVANSNXSQCSRHGAAA 66
Query: 401 LGARMNLFDRFARVVKSYANAV 466
LGARM+L DRFARVVKSYANA+
Sbjct: 67 LGARMSLLDRFARVVKSYANAI 88
>gb|ESW11706.1| hypothetical protein PHAVU_008G052900g [Phaseolus vulgaris]
Length = 322
Score = 82.8 bits (203), Expect = 4e-14
Identities = 42/88 (47%), Positives = 59/88 (67%)
Frame = +2
Query: 203 MAVRIPITGISMASAPSISSCNRVVVVKGPPFRASFFGQGVGALKLAGLQLTRSNRSRCN 382
MA+ + T I++A S S PPF++SF GAL++ G++++ S+R +CN
Sbjct: 1 MAMALKATPITVAGFVSTKSSTL------PPFKSSFLSYRSGALEVPGMRVSYSDRLKCN 54
Query: 383 SHGGGALGARMNLFDRFARVVKSYANAV 466
HGGGALG +MNLF RFARV+KSYANA+
Sbjct: 55 CHGGGALGTQMNLFSRFARVIKSYANAI 82
>ref|XP_006442841.1| hypothetical protein CICLE_v10021047mg [Citrus clementina]
gi|557545103|gb|ESR56081.1| hypothetical protein
CICLE_v10021047mg [Citrus clementina]
Length = 335
Score = 82.0 bits (201), Expect = 7e-14
Identities = 46/87 (52%), Positives = 56/87 (64%), Gaps = 5/87 (5%)
Frame = +2
Query: 221 ITGISMASAP-----SISSCNRVVVVKGPPFRASFFGQGVGALKLAGLQLTRSNRSRCNS 385
+TG +M P S SS + + +VK P SFF GVGALK+ L++ S+RS C
Sbjct: 8 VTGFTMPMTPAPSSSSSSSSSSLCMVK-KPLTTSFFNGGVGALKVTRLRIAPSSRSHCYR 66
Query: 386 HGGGALGARMNLFDRFARVVKSYANAV 466
GGGAL RMNLFDR ARVVKSYANA+
Sbjct: 67 QGGGALNTRMNLFDRLARVVKSYANAI 93
>ref|XP_006602846.1| PREDICTED: membrane-associated protein VIPP1, chloroplastic-like
isoform X2 [Glycine max]
Length = 323
Score = 81.6 bits (200), Expect = 1e-13
Identities = 36/59 (61%), Positives = 48/59 (81%)
Frame = +2
Query: 290 PPFRASFFGQGVGALKLAGLQLTRSNRSRCNSHGGGALGARMNLFDRFARVVKSYANAV 466
PPF++SF GAL++ G+++T S+R +CN HGGGALG +MNLF RFARV+KSYANA+
Sbjct: 24 PPFKSSFLRYRSGALEVPGMRVTYSDRLKCNCHGGGALGTQMNLFSRFARVIKSYANAI 82
>ref|XP_003552456.1| PREDICTED: membrane-associated protein VIPP1, chloroplastic-like
isoform X1 [Glycine max]
Length = 322
Score = 81.6 bits (200), Expect = 1e-13
Identities = 36/59 (61%), Positives = 48/59 (81%)
Frame = +2
Query: 290 PPFRASFFGQGVGALKLAGLQLTRSNRSRCNSHGGGALGARMNLFDRFARVVKSYANAV 466
PPF++SF GAL++ G+++T S+R +CN HGGGALG +MNLF RFARV+KSYANA+
Sbjct: 24 PPFKSSFLRYRSGALEVPGMRVTYSDRLKCNCHGGGALGTQMNLFSRFARVIKSYANAI 82
>ref|XP_006478599.1| PREDICTED: membrane-associated 30 kDa protein, chloroplastic-like
[Citrus sinensis]
Length = 335
Score = 81.3 bits (199), Expect = 1e-13
Identities = 46/87 (52%), Positives = 56/87 (64%), Gaps = 5/87 (5%)
Frame = +2
Query: 221 ITGISMASAP-----SISSCNRVVVVKGPPFRASFFGQGVGALKLAGLQLTRSNRSRCNS 385
+TG +M P S SS + + +VK P SFF GVGALK+ L++ S+RS C
Sbjct: 8 VTGFTMPMTPAPSSSSSSSSSSLCMVK-KPLTTSFFNGGVGALKVTRLRIAPSSRSYCYR 66
Query: 386 HGGGALGARMNLFDRFARVVKSYANAV 466
GGGAL RMNLFDR ARVVKSYANA+
Sbjct: 67 QGGGALNTRMNLFDRLARVVKSYANAI 93
>gb|EMJ28667.1| hypothetical protein PRUPE_ppa008331mg [Prunus persica]
Length = 336
Score = 80.5 bits (197), Expect = 2e-13
Identities = 48/94 (51%), Positives = 60/94 (63%), Gaps = 6/94 (6%)
Frame = +2
Query: 203 MAVRIPI-TGISMASAPSIS-----SCNRVVVVKGPPFRASFFGQGVGALKLAGLQLTRS 364
MA ++ I TG MAS P+ S S + + + P SFF GVGALK+ +++ S
Sbjct: 1 MATKLQIFTGFPMASTPASSFQASSSSSYSLAMVRKPLTTSFFNGGVGALKVEVIRVAPS 60
Query: 365 NRSRCNSHGGGALGARMNLFDRFARVVKSYANAV 466
NR + GGALGARMNLFDRFARVVKSYANA+
Sbjct: 61 NRPHYSRQRGGALGARMNLFDRFARVVKSYANAL 94
>ref|XP_002530318.1| Membrane-associated 30 kDa protein, chloroplast precursor, putative
[Ricinus communis] gi|223530174|gb|EEF32085.1|
Membrane-associated 30 kDa protein, chloroplast
precursor, putative [Ricinus communis]
Length = 312
Score = 80.1 bits (196), Expect = 3e-13
Identities = 43/72 (59%), Positives = 51/72 (70%)
Frame = +2
Query: 251 SISSCNRVVVVKGPPFRASFFGQGVGALKLAGLQLTRSNRSRCNSHGGGALGARMNLFDR 430
S SS N + +VK P SFF GV ALK+ TR++RS C +HGGG LG RMNLFDR
Sbjct: 33 SSSSGNTLSMVKPPYLTTSFFNGGVKALKVTR---TRTSRSHCFAHGGGGLGTRMNLFDR 89
Query: 431 FARVVKSYANAV 466
F+RVVKSYANA+
Sbjct: 90 FSRVVKSYANAI 101
>ref|XP_006381404.1| hypothetical protein POPTR_0006s12560g [Populus trichocarpa]
gi|550336107|gb|ERP59201.1| hypothetical protein
POPTR_0006s12560g [Populus trichocarpa]
Length = 342
Score = 79.3 bits (194), Expect = 5e-13
Identities = 44/84 (52%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Frame = +2
Query: 218 PITGISMASAPSISSCNRVV-VVKGPPFRASFFGQGVGALKLAGLQLTRSNRSRCNSHGG 394
P + S ++ S S+ N ++ +VK + SFF GV ALK+ ++ S RS C HGG
Sbjct: 18 PPSTSSSSNNNSNSNNNTILSLVKRRNLKTSFFNGGVEALKITRIRTGLSTRSHCYGHGG 77
Query: 395 GALGARMNLFDRFARVVKSYANAV 466
GALG RMNLFDRFARVVKSYANA+
Sbjct: 78 GALGTRMNLFDRFARVVKSYANAI 101
>ref|XP_006381403.1| hypothetical protein POPTR_0006s12560g [Populus trichocarpa]
gi|550336106|gb|ERP59200.1| hypothetical protein
POPTR_0006s12560g [Populus trichocarpa]
Length = 341
Score = 79.3 bits (194), Expect = 5e-13
Identities = 44/84 (52%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Frame = +2
Query: 218 PITGISMASAPSISSCNRVV-VVKGPPFRASFFGQGVGALKLAGLQLTRSNRSRCNSHGG 394
P + S ++ S S+ N ++ +VK + SFF GV ALK+ ++ S RS C HGG
Sbjct: 18 PPSTSSSSNNNSNSNNNTILSLVKRRNLKTSFFNGGVEALKITRIRTGLSTRSHCYGHGG 77
Query: 395 GALGARMNLFDRFARVVKSYANAV 466
GALG RMNLFDRFARVVKSYANA+
Sbjct: 78 GALGTRMNLFDRFARVVKSYANAI 101
>ref|XP_004290021.1| PREDICTED: membrane-associated 30 kDa protein, chloroplastic-like
[Fragaria vesca subsp. vesca]
Length = 332
Score = 79.0 bits (193), Expect = 6e-13
Identities = 45/90 (50%), Positives = 61/90 (67%), Gaps = 2/90 (2%)
Frame = +2
Query: 203 MAVRIPI-TGISMASAP-SISSCNRVVVVKGPPFRASFFGQGVGALKLAGLQLTRSNRSR 376
MA ++ I TG++MAS P S SS + + + P SFF GVG LK+ +++ S++
Sbjct: 1 MATKLQIFTGLTMASTPASSSSSSTSLSMVRRPLTTSFFNGGVGVLKVEFIRVAPSSKRH 60
Query: 377 CNSHGGGALGARMNLFDRFARVVKSYANAV 466
+ GGALGARMNLFDRF+RVVKSYANA+
Sbjct: 61 YSRQRGGALGARMNLFDRFSRVVKSYANAI 90
>gb|EXB55200.1| hypothetical protein L484_018127 [Morus notabilis]
Length = 324
Score = 78.6 bits (192), Expect = 8e-13
Identities = 43/81 (53%), Positives = 53/81 (65%)
Frame = +2
Query: 224 TGISMASAPSISSCNRVVVVKGPPFRASFFGQGVGALKLAGLQLTRSNRSRCNSHGGGAL 403
TG+S+AS P+ S R P ++FF GVG LK+ ++ SN+ + GGAL
Sbjct: 9 TGLSLASTPASSVVKR-------PLTSTFFAGGVGGLKVEVIRSAPSNKPHSSRQHGGAL 61
Query: 404 GARMNLFDRFARVVKSYANAV 466
GARMNLFDRFARVVKSYANAV
Sbjct: 62 GARMNLFDRFARVVKSYANAV 82
>gb|EOY04733.1| Plastid transcriptionally active 4 [Theobroma cacao]
Length = 337
Score = 76.3 bits (186), Expect = 4e-12
Identities = 47/90 (52%), Positives = 60/90 (66%), Gaps = 8/90 (8%)
Frame = +2
Query: 221 ITGISM-----ASAPSISSCNR---VVVVKGPPFRASFFGQGVGALKLAGLQLTRSNRSR 376
ITG+++ AS+ S SS N + +VK P +SFF GV ALK+ ++ T RS
Sbjct: 8 ITGLTLPLKPTASSSSSSSSNNSSGLCLVK-KPLTSSFFNGGVAALKVTRIR-TLPGRSH 65
Query: 377 CNSHGGGALGARMNLFDRFARVVKSYANAV 466
C+ GGGALG RMNLFDRFARVVKSYAN++
Sbjct: 66 CHRQGGGALGTRMNLFDRFARVVKSYANSI 95
>ref|NP_564846.1| plastid transcriptionally active 4 [Arabidopsis thaliana]
gi|44888073|sp|O80796.1|VIPP1_ARATH RecName:
Full=Membrane-associated protein VIPP1, chloroplastic;
AltName: Full=Protein VESICLE-INDUCING PROTEIN IN
PLASTIDS 1; Flags: Precursor gi|3335333|gb|AAC27135.1|
Similar to chloroplast membrane-associated 30KD protein
precursor (IM30) gb|M73744 from Pisum sativum. ESTs
gb|N37557, gb|W43887 and gb|AA042479 come from this gene
[Arabidopsis thaliana] gi|15027977|gb|AAK76519.1|
unknown protein [Arabidopsis thaliana]
gi|21436055|gb|AAM51228.1| unknown protein [Arabidopsis
thaliana] gi|332196228|gb|AEE34349.1| plastid
transcriptionally active 4 [Arabidopsis thaliana]
Length = 330
Score = 73.6 bits (179), Expect = 3e-11
Identities = 44/89 (49%), Positives = 57/89 (64%), Gaps = 6/89 (6%)
Frame = +2
Query: 218 PITGI------SMASAPSISSCNRVVVVKGPPFRASFFGQGVGALKLAGLQLTRSNRSRC 379
P+TG+ + +S+PS SS NR ++ P R SFFG GAL++ L+L NR RC
Sbjct: 7 PVTGLFPPLRPTASSSPSTSS-NRPCSLRILPLRTSFFGNSSGALRVNVLRLACDNRLRC 65
Query: 380 NSHGGGALGARMNLFDRFARVVKSYANAV 466
N H GA MNLF+RF+RVVKSYANA+
Sbjct: 66 NGH-----GATMNLFERFSRVVKSYANAL 89
>dbj|BAF00958.1| hypothetical protein [Arabidopsis thaliana]
Length = 214
Score = 73.6 bits (179), Expect = 3e-11
Identities = 44/89 (49%), Positives = 57/89 (64%), Gaps = 6/89 (6%)
Frame = +2
Query: 218 PITGI------SMASAPSISSCNRVVVVKGPPFRASFFGQGVGALKLAGLQLTRSNRSRC 379
P+TG+ + +S+PS SS NR ++ P R SFFG GAL++ L+L NR RC
Sbjct: 26 PVTGLFPPLRPTASSSPSTSS-NRPCSLRILPLRTSFFGNSSGALRVNVLRLACDNRLRC 84
Query: 380 NSHGGGALGARMNLFDRFARVVKSYANAV 466
N H GA MNLF+RF+RVVKSYANA+
Sbjct: 85 NGH-----GATMNLFERFSRVVKSYANAL 108
>gb|EXB88153.1| hypothetical protein L484_005578 [Morus notabilis]
Length = 449
Score = 73.2 bits (178), Expect = 3e-11
Identities = 38/88 (43%), Positives = 56/88 (63%)
Frame = +2
Query: 203 MAVRIPITGISMASAPSISSCNRVVVVKGPPFRASFFGQGVGALKLAGLQLTRSNRSRCN 382
+AV++ + +AS+ +S + P ++SF GV LK+ L+++ S+R N
Sbjct: 121 IAVKMAMKASPVASSSIVSLLRPSSSTRFEPLKSSFLRYGVEGLKIPILRISHSDRLSPN 180
Query: 383 SHGGGALGARMNLFDRFARVVKSYANAV 466
HGGGALG+ MNLF RFARV+KSYANA+
Sbjct: 181 CHGGGALGSHMNLFTRFARVIKSYANAI 208
>gb|ESW12278.1| hypothetical protein PHAVU_008G0992000g, partial [Phaseolus
vulgaris] gi|561013418|gb|ESW12279.1| hypothetical
protein PHAVU_008G0992000g, partial [Phaseolus vulgaris]
Length = 165
Score = 72.4 bits (176), Expect = 6e-11
Identities = 51/93 (54%), Positives = 61/93 (65%), Gaps = 5/93 (5%)
Frame = +2
Query: 203 MAVRIPI-TGISMA---SAPSISSCNRVVVVKGPPFRASFFGQG-VGALKLAGLQLTRSN 367
MA ++ I TG++ A S+PS SS VV K P SFFG G V LKL+ +++ +
Sbjct: 1 MATKLHIFTGLTPAPFQSSPSSSSSILCVVKK--PLSTSFFGAGGVEVLKLSAMRIAKPV 58
Query: 368 RSRCNSHGGGALGARMNLFDRFARVVKSYANAV 466
R GGGALGARMNLFDRFARVVKSYANAV
Sbjct: 59 R------GGGALGARMNLFDRFARVVKSYANAV 85