BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00003916
         (1004 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006345371.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   243   1e-61
ref|XP_004229170.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   236   8e-60
ref|XP_002513114.1| conserved hypothetical protein [Ricinus comm...    65   4e-08
ref|XP_002303905.2| hypothetical protein POPTR_0003s20160g [Popu...    63   2e-07
ref|XP_002303904.1| predicted protein [Populus trichocarpa]            63   2e-07
gb|EXC10458.1| Ubiquitin carboxyl-terminal hydrolase 24 [Morus n...    61   8e-07
gb|EMJ08946.1| hypothetical protein PRUPE_ppb017241mg, partial [...    58   7e-06
ref|XP_002268974.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    58   7e-06

>ref|XP_006345371.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like [Solanum
           tuberosum]
          Length = 533

 Score =  243 bits (619), Expect = 1e-61
 Identities = 131/189 (69%), Positives = 143/189 (75%)
 Frame = -3

Query: 567 MSDSKVFVFGSFTEDETKSLLNQPSGYDSNKHVEAKVLVNPSKFVPDLSFGSFSAVSDSQ 388
           MSDSKVF+FGSFTEDETKSLLNQPSG D NKHVE KV VN SK  PD SFGSF+AVS+SQ
Sbjct: 1   MSDSKVFLFGSFTEDETKSLLNQPSGCDGNKHVEEKVPVNSSKSEPDFSFGSFNAVSNSQ 60

Query: 387 PGSSREKIGSDSSTTLKEQKAGHKKPEADYLPREIKQNGDIHNNYYVNGHEGSPMVHNND 208
           P  S+E++GSDSSTTLKE+KAG     AD L REIKQNGD+HN+YY+NGHE S MVHN D
Sbjct: 61  PAYSKERVGSDSSTTLKEEKAG-----ADNLLREIKQNGDVHNDYYINGHEESAMVHNID 115

Query: 207 FSNLRVSEDEGKAINKLSSTTGQNDDALRXXXXXXXXXXXXXXXAHSEQAPIEVSGGPLD 28
            SNL V ED  KAINKLS TTG++DDAL                 HSEQA  EVSGGPLD
Sbjct: 116 LSNLCVLEDGPKAINKLSRTTGRDDDALLNKGKLNGTTSNSAKSVHSEQALPEVSGGPLD 175

Query: 27  VADLLPRGL 1
           VA LLPRGL
Sbjct: 176 VAGLLPRGL 184


>ref|XP_004229170.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like [Solanum
           lycopersicum]
          Length = 533

 Score =  236 bits (603), Expect = 8e-60
 Identities = 126/189 (66%), Positives = 140/189 (74%)
 Frame = -3

Query: 567 MSDSKVFVFGSFTEDETKSLLNQPSGYDSNKHVEAKVLVNPSKFVPDLSFGSFSAVSDSQ 388
           MSDSK+F+FGSFTEDETKSLLNQPSG D NKHVE KV VN S+  P  SFGSF AVS+SQ
Sbjct: 1   MSDSKIFLFGSFTEDETKSLLNQPSGCDGNKHVEEKVPVNSSESEPGFSFGSFGAVSNSQ 60

Query: 387 PGSSREKIGSDSSTTLKEQKAGHKKPEADYLPREIKQNGDIHNNYYVNGHEGSPMVHNND 208
           P SS+E++GSDSSTTLKE+KAG     AD L REI QNGD+HN+YY+NGHE S M HN D
Sbjct: 61  PASSKERVGSDSSTTLKEEKAG-----ADNLLREINQNGDVHNDYYINGHEESAMAHNID 115

Query: 207 FSNLRVSEDEGKAINKLSSTTGQNDDALRXXXXXXXXXXXXXXXAHSEQAPIEVSGGPLD 28
            SNL V EDE KAINKLS TTG++DDAL                 HSE+A  EVS GPLD
Sbjct: 116 LSNLCVLEDEAKAINKLSRTTGRDDDALLSKGKLNGTTSNSAKILHSEEALPEVSSGPLD 175

Query: 27  VADLLPRGL 1
           VA LLPRGL
Sbjct: 176 VAGLLPRGL 184


>ref|XP_002513114.1| conserved hypothetical protein [Ricinus communis]
           gi|223548125|gb|EEF49617.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 605

 Score = 65.1 bits (157), Expect = 4e-08
 Identities = 52/144 (36%), Positives = 73/144 (50%), Gaps = 9/144 (6%)
 Frame = -3

Query: 552 VFVFGSFTEDETKSLLNQPSGYDSNKHVEAKVLVNPS-KFVPDLSFGSFSAVSDSQPGSS 376
           V VFGSFTEDETKS     S  +  K V+ K L   S  F   ++FG FS+ S  QPGS+
Sbjct: 89  VLVFGSFTEDETKSWQANKSSENDKKPVQKKELQFGSLNFATGITFGDFSSESSRQPGST 148

Query: 375 REKIGSDSSTTLKEQK----AGHKKPEADYLPREIKQNGDI----HNNYYVNGHEGSPMV 220
             K+   S+   K++K    A + +P     P   KQNG I    H+    NG +G    
Sbjct: 149 NGKVSFQSTNPHKKEKDVKIAINPEPSVLGSP---KQNGSIADITHSVTLANGVKGL-KT 204

Query: 219 HNNDFSNLRVSEDEGKAINKLSST 148
            + D ++L +S++E   IN   S+
Sbjct: 205 ESLDLASLHLSQNEDSPINLSQSS 228


>ref|XP_002303905.2| hypothetical protein POPTR_0003s20160g [Populus trichocarpa]
           gi|550343601|gb|EEE78884.2| hypothetical protein
           POPTR_0003s20160g [Populus trichocarpa]
          Length = 543

 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 58/195 (29%), Positives = 90/195 (46%), Gaps = 6/195 (3%)
 Frame = -3

Query: 567 MSDSK-VFVFGSFTEDETKSLLNQPSGYDSNKHVE-AKVLVNPSKFVPDLSFGSFSAVSD 394
           MSDSK V VFGSFTEDETKSLL + S     K VE  ++      F   ++FG+F    +
Sbjct: 1   MSDSKKVLVFGSFTEDETKSLLGKQSPGKVEKPVEKIELRFGSLNFGTGITFGNFDTTLN 60

Query: 393 SQPGSSREKIGSDSSTTLKEQKAGHKKPEADYLPREIKQNGDIHNNYYVNGHEGSPMV-- 220
           +Q  S+   + S S + + ++K      E D +    ++NG I N+ + +       V  
Sbjct: 61  TQLASANGNVTSQSKSLVMKEKDVKVAKEGDGVLGSPRENGSIGNSNHGSSLSNGVDVLK 120

Query: 219 -HNNDFSNLRVSEDEGKAINKLSSTTGQNDDALRXXXXXXXXXXXXXXXAHSEQAPIEVS 43
             + D ++L +SE E    + L S++    D+                    ++   + +
Sbjct: 121 TESIDLTSLHLSEKEDGPASPLQSSSFHVLDSEGIKDGDHDGTTNDSSIHVRKEDVWKAN 180

Query: 42  GGPLD-VADLLPRGL 1
            GPL  V  LLPRGL
Sbjct: 181 DGPLPAVKSLLPRGL 195


>ref|XP_002303904.1| predicted protein [Populus trichocarpa]
          Length = 231

 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 58/195 (29%), Positives = 90/195 (46%), Gaps = 6/195 (3%)
 Frame = -3

Query: 567 MSDSK-VFVFGSFTEDETKSLLNQPSGYDSNKHVE-AKVLVNPSKFVPDLSFGSFSAVSD 394
           MSDSK V VFGSFTEDETKSLL + S     K VE  ++      F   ++FG+F    +
Sbjct: 1   MSDSKKVLVFGSFTEDETKSLLGKQSPGKVEKPVEKIELRFGSLNFGTGITFGNFDTTLN 60

Query: 393 SQPGSSREKIGSDSSTTLKEQKAGHKKPEADYLPREIKQNGDIHNNYYVNGHEGSPMV-- 220
           +Q  S+   + S S + + ++K      E D +    ++NG I N+ + +       V  
Sbjct: 61  TQLASANGNVTSQSKSLVMKEKDVKVAKEGDGVLGSPRENGSIGNSNHGSSLSNGVDVLK 120

Query: 219 -HNNDFSNLRVSEDEGKAINKLSSTTGQNDDALRXXXXXXXXXXXXXXXAHSEQAPIEVS 43
             + D ++L +SE E    + L S++    D+                    ++   + +
Sbjct: 121 TESIDLTSLHLSEKEDGPASPLQSSSFHVLDSEGIKDGDHDGTTNDSSIHVRKEDVWKAN 180

Query: 42  GGPLD-VADLLPRGL 1
            GPL  V  LLPRGL
Sbjct: 181 DGPLPAVKSLLPRGL 195


>gb|EXC10458.1| Ubiquitin carboxyl-terminal hydrolase 24 [Morus notabilis]
          Length = 564

 Score = 60.8 bits (146), Expect = 8e-07
 Identities = 51/133 (38%), Positives = 65/133 (48%), Gaps = 9/133 (6%)
 Frame = -3

Query: 609 SL*YSEINSQFLHSMSDSK-----VFVFGSFTEDETKSLLNQPSGYDSNKHVEAKVLVNP 445
           SL Y E N     S SDS      VF+FGSFTEDETKSLL   S  +  K VE KV    
Sbjct: 13  SLGYQE-NIISFQSHSDSTGFVKLVFLFGSFTEDETKSLLRAQSSKNGEKAVEKKV---- 67

Query: 444 SKFVPDLSFGSFSAVSDSQPGSSREKIGSDSSTTLKEQKAGHKKP----EADYLPREIKQ 277
                 L FGS +  S+   G  +    +D+S+T ++ K  H KP    + D + +  K 
Sbjct: 68  ------LQFGSLNFDSEQSFGGPK---STDTSSTDQKGKPQHAKPLDSLKKDNVVKSAKT 118

Query: 276 NGDIHNNYYVNGH 238
             D+HN    NGH
Sbjct: 119 AQDVHNLPKENGH 131


>gb|EMJ08946.1| hypothetical protein PRUPE_ppb017241mg, partial [Prunus persica]
          Length = 236

 Score = 57.8 bits (138), Expect = 7e-06
 Identities = 55/155 (35%), Positives = 77/155 (49%), Gaps = 11/155 (7%)
 Frame = -3

Query: 567 MSDSKVFVFGSFTEDETKSLLNQPSGYDSNKHVEAKVLVNPS-KFVPDLSFGSFSAVSDS 391
           MSDSK+FVFGSF+EDET+SLL + S   + K +E  VL   S  FV  +S G  +  S S
Sbjct: 14  MSDSKLFVFGSFSEDETRSLLQKQSPGKAEKPLEKNVLQFGSINFVTKISSGECNGES-S 72

Query: 390 QPGSSREKIG--SDSSTTLKEQKAGHKKPEADYLPREI---KQNGDIHNNYYVNGHEGS- 229
           +P +S + +      S+  K  +    K   D LP  +    +NG   N  Y NG   S 
Sbjct: 73  RPQNSVKGLSKVQPLSSLNKPNEVEAVKAANDSLPASLTTPTENGCTDN--YKNGSAHSN 130

Query: 228 ----PMVHNNDFSNLRVSEDEGKAINKLSSTTGQN 136
                 + N D ++L +S + G   N+ SS   QN
Sbjct: 131 GVTEATMDNLDVASLPLSNNAGGLSNQFSSLELQN 165


>ref|XP_002268974.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24 [Vitis
           vinifera] gi|296081305|emb|CBI17749.3| unnamed protein
           product [Vitis vinifera]
          Length = 553

 Score = 57.8 bits (138), Expect = 7e-06
 Identities = 47/155 (30%), Positives = 65/155 (41%), Gaps = 4/155 (2%)
 Frame = -3

Query: 576 LHSMSDSKVFVFGSFTEDETKSLLNQPSGYDSNKHVEAKVLVNPSKFVPDLSFGSFSAVS 397
           +H MSDSK+ +FGSFTEDET+SLL  PSG       + ++      FV   +  S     
Sbjct: 1   MHKMSDSKLLLFGSFTEDETRSLLRLPSGNAEKPAAKKELQFGSVDFVTGRALASVGNEL 60

Query: 396 DSQPGSSREKIGSDSSTTLKEQKAGHKKPEADYLPREI----KQNGDIHNNYYVNGHEGS 229
             Q  SS+  I   SS  LK+          + L  E     K+NG +H+          
Sbjct: 61  CRQADSSKGPIDFCSSNLLKKDDETKSVDGVNKLSSEAAGTPKENGGVHD---------- 110

Query: 228 PMVHNNDFSNLRVSEDEGKAINKLSSTTGQNDDAL 124
              H++   N  V+E      N  S    QN + L
Sbjct: 111 -FTHSSPLGNGVVNELNPDRFNLDSLCLSQNKEHL 144