BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00003727
         (713 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252...   196   8e-48
emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]   196   8e-48
ref|XP_003635668.1| PREDICTED: uncharacterized protein LOC100854...   195   1e-47
emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]   193   4e-47
gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]          192   1e-46
emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera]   191   2e-46
ref|XP_006465748.1| PREDICTED: uncharacterized protein LOC102628...   187   3e-45
emb|CAN76029.1| hypothetical protein VITISV_016069 [Vitis vinifera]   177   3e-42
emb|CAN81655.1| hypothetical protein VITISV_042593 [Vitis vinifera]   150   3e-34
emb|CAN82978.1| hypothetical protein VITISV_023328 [Vitis vinifera]   146   7e-33
gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]               143   5e-32
emb|CAN62301.1| hypothetical protein VITISV_034115 [Vitis vinifera]   133   5e-29
ref|XP_004233808.1| PREDICTED: uncharacterized protein LOC101263...   130   3e-28
gb|ABA91445.2| retrotransposon protein, putative, Ty1-copia subc...   125   1e-26
emb|CAD40924.3| OSJNBa0033G16.12 [Oryza sativa Japonica Group]        125   1e-26
gb|AAX92828.1| retrotransposon protein, putative, Ty1-copia sub-...   125   2e-26
gb|AAT39267.1| putative polyprotein [Oryza sativa Japonica Group...   125   2e-26
gb|ABA96779.1| retrotransposon protein, putative, Ty1-copia subc...   124   3e-26
gb|ABF97537.1| retrotransposon protein, putative, Ty1-copia subc...   124   3e-26
gb|AAT93940.1| putative polyprotein [Oryza sativa Japonica Group]     124   3e-26

>ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252656 [Vitis vinifera]
          Length = 946

 Score =  196 bits (497), Expect = 8e-48
 Identities = 118/254 (46%), Positives = 155/254 (61%), Gaps = 17/254 (6%)
 Frame = -2

Query: 712 EFMSYLKLKTKKMGFEDLIIKLQIQKDNKRAISKGKQPM-EARVNLVD--------SKGN 560
           +F + LK K K+M  EDLII+L+I++DN+R+  KG   + EA+ N V+        +  N
Sbjct: 198 DFKNCLKHKRKEMSIEDLIIRLRIEEDNRRSEKKGVHTLNEAKANFVEHGQSSKAKTNNN 257

Query: 559 ANKKRKYQGDGKSQPKERFKGTCHHCGKPGHMIXXXXXXXXXXXXXXXXXXXXXXXXKHE 380
             K  K    G    K +F+G C +CGK GH                          K++
Sbjct: 258 KGKGSKLGPKGGISKKPKFQGKCFNCGKQGHK-----------------SVDCRLPKKNK 300

Query: 379 GSPSNLDDMI------VDFSAVVLEANLV-ENLR*WWIDTGATRHICSDKSAFSSYTLI- 224
              +N+ D I      +D +AVV E NLV  N + WWIDTGATRH+CSDK  FS++  I 
Sbjct: 301 PKEANVIDNITKNVSNIDLTAVVSEVNLVGSNPKEWWIDTGATRHVCSDKKMFSTFEPIE 360

Query: 223 TGKKLFMGNNATSEVQGVGKVILKMTSSKELTLKEVLHVPDIRKNLVSGPLLIKAGFRLV 44
            G+K+FMGN+ TSE++G GKVILKMTS KELTL  VL+VP+IRKNLVSG LL   GFRLV
Sbjct: 361 NGEKVFMGNSTTSEIKGQGKVILKMTSGKELTLTNVLYVPEIRKNLVSGSLLNNHGFRLV 420

Query: 43  FESNKFVLTKNGIF 2
           FESNKFVL+K+G++
Sbjct: 421 FESNKFVLSKSGMY 434


>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
          Length = 1316

 Score =  196 bits (497), Expect = 8e-48
 Identities = 118/254 (46%), Positives = 155/254 (61%), Gaps = 17/254 (6%)
 Frame = -2

Query: 712 EFMSYLKLKTKKMGFEDLIIKLQIQKDNKRAISKGKQPM-EARVNLVD--------SKGN 560
           +F +YLK K K+M  EDLII+L+I++DN+R+  KG   + EA+ N V+        +  N
Sbjct: 198 DFKNYLKHKRKEMSIEDLIIRLRIEEDNRRSEKKGAHTLNEAKANFVEHGQSSKAKTNNN 257

Query: 559 ANKKRKYQGDGKSQPKERFKGTCHHCGKPGHMIXXXXXXXXXXXXXXXXXXXXXXXXKHE 380
             K  K    G    K +F+G C +CGK GH                          K++
Sbjct: 258 KGKGSKLGPKGGISKKPKFQGKCFNCGKQGHK-----------------SVDCRLPKKNK 300

Query: 379 GSPSNLDDMI------VDFSAVVLEANLV-ENLR*WWIDTGATRHICSDKSAFSSYTLI- 224
              +N+ D I      +D +AVV E NLV  N + WWIDTGATRH+CSDK  FS++  I 
Sbjct: 301 PKEANVIDDITKNVYDIDLTAVVSEVNLVGSNPKEWWIDTGATRHVCSDKKMFSTFEPIE 360

Query: 223 TGKKLFMGNNATSEVQGVGKVILKMTSSKELTLKEVLHVPDIRKNLVSGPLLIKAGFRLV 44
            G+K+FMGN+ATSE++G GKVILKMTS KELTL  VL+VP+IRKNLVSG LL   GFRLV
Sbjct: 361 NGEKVFMGNSATSEIKGQGKVILKMTSGKELTLTNVLYVPEIRKNLVSGSLLNNHGFRLV 420

Query: 43  FESNKFVLTKNGIF 2
           F SNK VL+K+G++
Sbjct: 421 FXSNKVVLSKSGMY 434


>ref|XP_003635668.1| PREDICTED: uncharacterized protein LOC100854178, partial [Vitis
           vinifera]
          Length = 478

 Score =  195 bits (496), Expect = 1e-47
 Identities = 117/254 (46%), Positives = 155/254 (61%), Gaps = 17/254 (6%)
 Frame = -2

Query: 712 EFMSYLKLKTKKMGFEDLIIKLQIQKDNKRAISKGKQPM-EARVNLVD--------SKGN 560
           +F +YLK K K+M  EDLII+L+I++DN+R+  KG   + EA+ N V+        +  N
Sbjct: 198 DFKNYLKHKRKEMSIEDLIIRLRIEEDNRRSEKKGAHTLNEAKANFVEHGQSSNAKTNNN 257

Query: 559 ANKKRKYQGDGKSQPKERFKGTCHHCGKPGHMIXXXXXXXXXXXXXXXXXXXXXXXXKHE 380
             K  K    G    K +F+G C +CGK GH                          K++
Sbjct: 258 KGKGSKLGPKGGISKKPKFQGKCFNCGKQGHK-----------------SVDCRLPKKNK 300

Query: 379 GSPSNLDDMI------VDFSAVVLEANLV-ENLR*WWIDTGATRHICSDKSAFSSYTLI- 224
              +N+ D I      +D + VV E NLV  N + WWIDTGATRH+CSDK  FS++  I 
Sbjct: 301 PKEANVIDDITKNVYDIDLTTVVSEVNLVGSNPKEWWIDTGATRHVCSDKKMFSTFEPIE 360

Query: 223 TGKKLFMGNNATSEVQGVGKVILKMTSSKELTLKEVLHVPDIRKNLVSGPLLIKAGFRLV 44
            G+K+FMGN+ATSE++G GKVILKMTS KELTL  VL+VP+IRKNLVSG LL   GFRLV
Sbjct: 361 NGEKVFMGNSATSEIKGQGKVILKMTSGKELTLTNVLYVPEIRKNLVSGSLLNNHGFRLV 420

Query: 43  FESNKFVLTKNGIF 2
           F+SNK VL+K+G++
Sbjct: 421 FDSNKVVLSKSGMY 434


>emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
          Length = 1277

 Score =  193 bits (491), Expect = 4e-47
 Identities = 114/248 (45%), Positives = 149/248 (60%), Gaps = 11/248 (4%)
 Frame = -2

Query: 712 EFMSYLKLKTKKMGFEDLIIKLQIQKDNKRAISKGKQPM-EARVNLVD--------SKGN 560
           +F +YLK K K+M  EDLII+L+I++DN+R+  KG   + EA+ N V+        +  N
Sbjct: 198 DFKNYLKHKRKEMSIEDLIIRLRIEEDNRRSEKKGAHTLNEAQANFVEHGQSSKAKTNNN 257

Query: 559 ANKKRKYQGDGKSQPKERFKGTCHHCGKPGHMIXXXXXXXXXXXXXXXXXXXXXXXXKHE 380
             K  K    G    K +F+G C +CGK GH                            +
Sbjct: 258 KGKGSKLGPKGGISKKPKFQGKCFNCGKQGHKSVDCRLPKKNKPKEANVI---------D 308

Query: 379 GSPSNLDDMIVDFSAVVLEANLV-ENLR*WWIDTGATRHICSDKSAFSSYTLI-TGKKLF 206
               N+ D  +D + VV E NLV  N + WWIDTGATRH+CSDK  FS++  I  G+K+F
Sbjct: 309 NITKNVSD--IDLTTVVSEVNLVGSNPKEWWIDTGATRHVCSDKKMFSTFEPIENGEKVF 366

Query: 205 MGNNATSEVQGVGKVILKMTSSKELTLKEVLHVPDIRKNLVSGPLLIKAGFRLVFESNKF 26
           MGN+ TSE++G GKVILKMTS KELTL  VL+VP+IRKNLV G LL   GFRLVFESNK 
Sbjct: 367 MGNSTTSEIKGQGKVILKMTSGKELTLTNVLYVPEIRKNLVFGSLLNNHGFRLVFESNKV 426

Query: 25  VLTKNGIF 2
           VL+K+G++
Sbjct: 427 VLSKSGMY 434


>gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]
          Length = 701

 Score =  192 bits (487), Expect = 1e-46
 Identities = 111/239 (46%), Positives = 148/239 (61%), Gaps = 2/239 (0%)
 Frame = -2

Query: 712 EFMSYLKLKTKKMGFEDLIIKLQIQKDNKRAISKGKQPMEARVNLVDSKGNANKKRKYQG 533
           +F SYLK K K+M  E L++KL+I++DN+ A   G   M A+ N V+      KK+    
Sbjct: 199 DFKSYLKHKQKEMNIEGLVVKLRIEEDNRNAERIGAISM-AKANFVEHGPKKKKKKLGPK 257

Query: 532 DGKSQPKERFKGTCHHCGKPGHMIXXXXXXXXXXXXXXXXXXXXXXXXKHEGSPSNLDDM 353
            G S+ + +F+G C++C K GH                            E    ++ D 
Sbjct: 258 GGISKKQTKFQGKCYNCDKMGHKASDCRLPKKKREANVV-----------ENITQHVSD- 305

Query: 352 IVDFSAVVLEANLV-ENLR*WWIDTGATRHICSDKSAFSSYTLITGK-KLFMGNNATSEV 179
            ++ SAVVLE N+V  N R WWIDTGATRH+CSDK  F+S+   + + KLFMGN+ATSE+
Sbjct: 306 -INLSAVVLEVNMVGSNPREWWIDTGATRHVCSDKGLFTSFEAASNREKLFMGNSATSEI 364

Query: 178 QGVGKVILKMTSSKELTLKEVLHVPDIRKNLVSGPLLIKAGFRLVFESNKFVLTKNGIF 2
           +G GKV LKMTS KELTL  VL+VP+IRKNLVSG LL K GFR+VFES+  VL+KNG++
Sbjct: 365 EGQGKVALKMTSGKELTLNNVLYVPEIRKNLVSGSLLNKHGFRMVFESDMVVLSKNGMY 423


>emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera]
          Length = 1316

 Score =  191 bits (486), Expect = 2e-46
 Identities = 104/241 (43%), Positives = 146/241 (60%), Gaps = 4/241 (1%)
 Frame = -2

Query: 712 EFMSYLKLKTKKMGFEDLIIKLQIQKDNKRAISKGKQPMEARVNLVDSKGNANKKRKYQG 533
           +F +YLK K K+M  E+LI++L+I++DN+++  KG   MEA+ N+++     NKKRK+  
Sbjct: 368 DFKNYLKHKRKEMNLEELIVRLRIEEDNRKSEKKGNNSMEAKANVIEQGPKTNKKRKHGD 427

Query: 532 DGKSQPK---ERFKGTCHHCGKPGHMIXXXXXXXXXXXXXXXXXXXXXXXXKHEGSPSNL 362
             ++Q     ++FKG C++CGK GH                                   
Sbjct: 428 QNQNQESNVAKKFKGKCYNCGKTGH----------------------------------- 452

Query: 361 DDMIVDFSAVVLEANLVENLR*WWIDTGATRHICSDKSAFSSYTLIT-GKKLFMGNNATS 185
                       ++N   N + WW+DTGATRHICS+K  FS+Y  +   ++LFMGN+++S
Sbjct: 453 ------------KSNDYRNTKEWWVDTGATRHICSNKWMFSTYKPVEQNEELFMGNSSSS 500

Query: 184 EVQGVGKVILKMTSSKELTLKEVLHVPDIRKNLVSGPLLIKAGFRLVFESNKFVLTKNGI 5
           +++G GKVILKMTS KELTL +VLHVPDI KNLVSG LL K GF+LVF S+KFVLTKN +
Sbjct: 501 KIEGRGKVILKMTSGKELTLNDVLHVPDICKNLVSGSLLSKNGFKLVFVSDKFVLTKNEM 560

Query: 4   F 2
           F
Sbjct: 561 F 561


>ref|XP_006465748.1| PREDICTED: uncharacterized protein LOC102628178 [Citrus sinensis]
          Length = 2248

 Score =  187 bits (475), Expect = 3e-45
 Identities = 113/241 (46%), Positives = 152/241 (63%), Gaps = 4/241 (1%)
 Frame = -2

Query: 712  EFMSYLKLKTKKMGFEDLIIKLQIQKDNKRAISKGKQPMEARVNLVDSKGNANKKRKYQG 533
            +F SYLK K K+M  E+L++KL+I++DN+ A   G   M A+ N+V+ +   NKK K  G
Sbjct: 1133 DFKSYLKHKCKEMNIEELVVKLRIEEDNRNAERIGAISM-AKANVVEHRPK-NKKNKKLG 1190

Query: 532  --DGKSQPKERFKGTCHHCGKPGHMIXXXXXXXXXXXXXXXXXXXXXXXXKHEGSPSNLD 359
               G S+ +  F+G   +C K GH +                          E    ++ 
Sbjct: 1191 PKGGISKKQTNFQGKYFNCDKMGHKVSDCRLPKKKREENVV-----------ENITQHVS 1239

Query: 358  DMIVDFSAVVLEANLV-ENLR*WWIDTGATRHICSDKSAFSSY-TLITGKKLFMGNNATS 185
            D  ++ SAVV E NLV  N R WWIDTGATRH+CSDK  F+S+ T+  G+KLFMGN+A S
Sbjct: 1240 D--INLSAVVSEVNLVGSNPREWWIDTGATRHVCSDKGLFTSFETVSNGEKLFMGNSAMS 1297

Query: 184  EVQGVGKVILKMTSSKELTLKEVLHVPDIRKNLVSGPLLIKAGFRLVFESNKFVLTKNGI 5
            E++G G VILKMTS KELTL +VL+V +IRKNLVSG LL K GF++VFESN+ VL+KNG+
Sbjct: 1298 EIEGQGNVILKMTSGKELTLNDVLYVLEIRKNLVSGSLLNKHGFQMVFESNRVVLSKNGM 1357

Query: 4    F 2
            +
Sbjct: 1358 Y 1358


>emb|CAN76029.1| hypothetical protein VITISV_016069 [Vitis vinifera]
          Length = 1096

 Score =  177 bits (449), Expect = 3e-42
 Identities = 109/239 (45%), Positives = 142/239 (59%), Gaps = 17/239 (7%)
 Frame = -2

Query: 712 EFMSYLKLKTKKMGFEDLIIKLQIQKDNKRAISKGKQPM-EARVNLVD--------SKGN 560
           +F +YLK K K+M  EDLII+L+I++DN+R+  KG   + EA+ N V+        +  N
Sbjct: 119 DFKNYLKHKRKEMSIEDLIIRLRIEEDNRRSEKKGAHTLNEAKANFVEHGQSSKAKTNNN 178

Query: 559 ANKKRKYQGDGKSQPKERFKGTCHHCGKPGHMIXXXXXXXXXXXXXXXXXXXXXXXXKHE 380
             K  K    G    K +F+G C +CGK GH                          K++
Sbjct: 179 KGKGSKLGPKGGISKKPKFQGKCFNCGKQGHK-----------------SVDCRLPKKNK 221

Query: 379 GSPSNLDDMI------VDFSAVVLEANLV-ENLR*WWIDTGATRHICSDKSAFSSYTLI- 224
              +N+ D I      +D +AVV E NLV  N + WWIDTGATRH+CSDK  FS++  I 
Sbjct: 222 PKEANVIDDITKNVYDIDLTAVVSEVNLVGSNPKEWWIDTGATRHVCSDKKMFSTFEPIE 281

Query: 223 TGKKLFMGNNATSEVQGVGKVILKMTSSKELTLKEVLHVPDIRKNLVSGPLLIKAGFRL 47
            G+K+FMGN+ATSE++G GKVILKMTS KELTL  VL+VP+IRKNLVSG LL   GFRL
Sbjct: 282 NGEKVFMGNSATSEIKGQGKVILKMTSGKELTLTNVLYVPEIRKNLVSGSLLNNHGFRL 340


>emb|CAN81655.1| hypothetical protein VITISV_042593 [Vitis vinifera]
          Length = 627

 Score =  150 bits (380), Expect = 3e-34
 Identities = 94/222 (42%), Positives = 128/222 (57%), Gaps = 2/222 (0%)
 Frame = -2

Query: 661 LIIKLQIQKDNKRAISK-GKQPMEARVNLVDSKGNANKKRKYQGDGKSQPKERFKGTCHH 485
           ++ KL+I++DN+ +  K GK P E++ NLV+   NANKKRK   +            C+ 
Sbjct: 50  IVEKLKIEEDNRVSKKKVGKHPTESKTNLVEP--NANKKRKDFSE--------VCWKCYI 99

Query: 484 CGKPGHMIXXXXXXXXXXXXXXXXXXXXXXXXKHEGSPSNLDDMIVDFSAVVL-EANLVE 308
           C K GH                            +     L +M+   SA+VL EAN+V+
Sbjct: 100 CNKQGHRAKNCRLK-------------------EQSKEKELTNML---SALVLFEANMVD 137

Query: 307 NLR*WWIDTGATRHICSDKSAFSSYTLITGKKLFMGNNATSEVQGVGKVILKMTSSKELT 128
           N    W+DTG TRH+  +++ FS+Y L+ G+ L M N ATS V G+ KV+LKMT  KEL 
Sbjct: 138 NPNERWVDTGVTRHVYGERNIFSTYVLVNGRNLIMRNYATSRVVGIRKVVLKMTFGKELV 197

Query: 127 LKEVLHVPDIRKNLVSGPLLIKAGFRLVFESNKFVLTKNGIF 2
           L +VLHV DIR NLVSG +L K GF+LVFES+KFVL KNG++
Sbjct: 198 LTDVLHVLDIRNNLVSGSMLSKNGFKLVFESDKFVLMKNGMY 239


>emb|CAN82978.1| hypothetical protein VITISV_023328 [Vitis vinifera]
          Length = 474

 Score =  146 bits (368), Expect = 7e-33
 Identities = 75/117 (64%), Positives = 94/117 (80%), Gaps = 1/117 (0%)
 Frame = -2

Query: 349 VDFSAVVLEANLVENLR*WWIDTGATRHICSDKSAFSSYTLIT-GKKLFMGNNATSEVQG 173
           ++ SAVV E N+V N + WW+DTGATRHICS+K  FS+Y  +   ++LFMG +++S+V+G
Sbjct: 219 MNLSAVVSECNIVGNTKEWWVDTGATRHICSNKWMFSTYKPVEQNEELFMGYSSSSKVEG 278

Query: 172 VGKVILKMTSSKELTLKEVLHVPDIRKNLVSGPLLIKAGFRLVFESNKFVLTKNGIF 2
            GKVILKMTS KELTL +VLHVPDIRKNLVS  LL K GF+LVF S+KFVLTKN +F
Sbjct: 279 RGKVILKMTSGKELTLNDVLHVPDIRKNLVSRSLLSKNGFKLVFVSDKFVLTKNEMF 335


>gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]
          Length = 1290

 Score =  143 bits (361), Expect = 5e-32
 Identities = 89/252 (35%), Positives = 139/252 (55%), Gaps = 15/252 (5%)
 Frame = -2

Query: 712 EFMSYLKLKTKKMGFEDLIIKLQIQKDNKRAISKGK-QPMEARVNLVDSKGNANKKRKYQ 536
           ++   LK + K+M   DLI  + I+  N++  +  K + + A+ N+++ K  A K+ + +
Sbjct: 187 DYKQQLKHRQKQMSLSDLITHIIIEDTNRKECAAAKAKALSAKANVIEDKP-APKRYEKK 245

Query: 535 GDGKSQPKERF------------KGTCHHCGKPGHMIXXXXXXXXXXXXXXXXXXXXXXX 392
            D K +P  +F            KG C  CGKPGH                         
Sbjct: 246 FDHKKKPNNKFSRPSGTNPTFKKKGNCFVCGKPGHHAPQCRHRAKNDYPP---------- 295

Query: 391 XKHEGSPSNLDDMIVDFSAVVLEANLVENLR*WWIDTGATRHICSDKSAFSSYTLITG-- 218
              + + +  +D IV   AVV + NLV N+  W +D+GATRHIC++++ F+SYT +    
Sbjct: 296 ---KANLAEGEDTIV---AVVSQVNLVTNVSKWVVDSGATRHICANRNVFTSYTSVGDGE 349

Query: 217 KKLFMGNNATSEVQGVGKVILKMTSSKELTLKEVLHVPDIRKNLVSGPLLIKAGFRLVFE 38
           +++++G++ T+ V G GKV+LK+TS K L L +VLHVP IR NLVS  LL K G ++ FE
Sbjct: 350 EQVYLGDSRTTPVLGKGKVLLKLTSGKTLALNDVLHVPSIRVNLVSVALLSKVGVKVSFE 409

Query: 37  SNKFVLTKNGIF 2
           S+K V+TKN +F
Sbjct: 410 SDKIVITKNNVF 421


>emb|CAN62301.1| hypothetical protein VITISV_034115 [Vitis vinifera]
          Length = 588

 Score =  133 bits (335), Expect = 5e-29
 Identities = 85/250 (34%), Positives = 134/250 (53%), Gaps = 13/250 (5%)
 Frame = -2

Query: 712 EFMSYLKLKTKKMGFEDLIIKLQIQKDN--KRAISKGKQPMEARVNLVDSKGNANKKRKY 539
           ++ + +K K K+M  ED+II ++I++ N  +  I K K+ + ++ N+V+ K      R  
Sbjct: 47  DYKNNMKHKRKQMFLEDVIIHIRIEEQNLNRDNIEKAKE-LSSKANVVEEKSKPKNNRSR 105

Query: 538 QGDGKSQPKERFK---------GTCHHCGKPGHMIXXXXXXXXXXXXXXXXXXXXXXXXK 386
           + + +++P    K         G C  CGK GH                          +
Sbjct: 106 KQNSQTKPNASNKVHNSTIKKWGNCFVCGKSGH---------------HAPQCRHRKRIE 150

Query: 385 HEGSPSNLDDMIVDFSAVVLEANLVENLR*WWIDTGATRHICSDKSAFSSYTLITG--KK 212
              S +NL +  V    +  E ++V N++ W +D+ ATRHIC  KSAF+SYT +    ++
Sbjct: 151 KSNSKANLAEAEVITIVISFEVSMVTNMKDWVVDSRATRHICGKKSAFTSYTTLKEGEEQ 210

Query: 211 LFMGNNATSEVQGVGKVILKMTSSKELTLKEVLHVPDIRKNLVSGPLLIKAGFRLVFESN 32
           +FMG++ ++ V G GKV+LK+T  K L L +V HVPDIR N+V   LL KAG R++F+ +
Sbjct: 211 VFMGDSRSTLVIGKGKVLLKLTFGKVLVLNDVFHVPDIRWNMVLVSLLGKAGVRILFDFD 270

Query: 31  KFVLTKNGIF 2
           K VLTKN  F
Sbjct: 271 KIVLTKNDAF 280


>ref|XP_004233808.1| PREDICTED: uncharacterized protein LOC101263787 [Solanum
            lycopersicum]
          Length = 2703

 Score =  130 bits (328), Expect = 3e-28
 Identities = 87/246 (35%), Positives = 135/246 (54%), Gaps = 9/246 (3%)
 Frame = -2

Query: 712  EFMSYLKLKTKKMGFEDLIIKLQIQKDNKRAISKGKQPMEARVNLVDSKGNANKKRKYQG 533
            E+ S L  K + +  E L+  LQI+++ +   +   +    + ++V+ K    K+     
Sbjct: 918  EYRSKLLHKKEDLTLEQLLQHLQIEQETRYRDNNILREPIMKAHVVEEK--IKKEPANNK 975

Query: 532  DGKSQPKERFKGT--------CHHCGKPGHMIXXXXXXXXXXXXXXXXXXXXXXXXKHEG 377
              K++  + FK T        C+HC K GH                            E 
Sbjct: 976  FLKAKKSKNFKRTNSNSKSIKCYHCHKIGHYARDCKILKAEKKK--------------EK 1021

Query: 376  SPSNLDDMIVDFSAVVLEANLVENLR*WWIDTGATRHICSDKSAFSSYTLITGKK-LFMG 200
            + +N  + +V   A+V EA +  +   WWIDTGATRHI  ++++F++Y L+ G K L MG
Sbjct: 1022 ANNNTKNELV---AMVTEAFVAGDQVEWWIDTGATRHISGNRNSFTTYELVGGDKVLHMG 1078

Query: 199  NNATSEVQGVGKVILKMTSSKELTLKEVLHVPDIRKNLVSGPLLIKAGFRLVFESNKFVL 20
            N+++++V G G V LK TS K +TL +VLHVPDIRKNLVSG LL K GF+++FE++KF+L
Sbjct: 1079 NSSSAKVVGKGTVELKFTSEKMVTLIDVLHVPDIRKNLVSGTLLSKHGFKMIFEADKFIL 1138

Query: 19   TKNGIF 2
            +K G+F
Sbjct: 1139 SKQGMF 1144


>gb|ABA91445.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1320

 Score =  125 bits (315), Expect = 1e-26
 Identities = 86/245 (35%), Positives = 117/245 (47%), Gaps = 9/245 (3%)
 Frame = -2

Query: 709 FMSYLKLKTKKMGFEDLIIKLQIQKD--NKRAISKGK--QPMEARVNLVDSKGNANKKRK 542
           F + LK K ++   E LI  L +++    K A SKG   Q     V+   +K N   K +
Sbjct: 161 FGTALKHKRQEYSVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHKAQNKSNGKYKAQ 220

Query: 541 YQGDGKSQPKE-----RFKGTCHHCGKPGHMIXXXXXXXXXXXXXXXXXXXXXXXXKHEG 377
              + K Q K      + + TC  CG+ GH+                          + G
Sbjct: 221 QTTNFKKQKKNNNNPNQDERTCFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTG 280

Query: 376 SPSNLDDMIVDFSAVVLEANLVENLR*WWIDTGATRHICSDKSAFSSYTLITGKKLFMGN 197
             S   ++   FS        V     WW+DTGA  H+C+D S FSSY +  G  + MGN
Sbjct: 281 DGSGYGNLPTVFS--------VNQSTNWWVDTGANVHVCADISLFSSYQVARGSTVLMGN 332

Query: 196 NATSEVQGVGKVILKMTSSKELTLKEVLHVPDIRKNLVSGPLLIKAGFRLVFESNKFVLT 17
            + + V GVG V LK TS K + LK V HVP I +NLVSG  L + GF+LVFESNK V++
Sbjct: 333 GSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVS 392

Query: 16  KNGIF 2
           K+G F
Sbjct: 393 KHGYF 397


>emb|CAD40924.3| OSJNBa0033G16.12 [Oryza sativa Japonica Group]
          Length = 1320

 Score =  125 bits (315), Expect = 1e-26
 Identities = 86/247 (34%), Positives = 119/247 (48%), Gaps = 11/247 (4%)
 Frame = -2

Query: 709 FMSYLKLKTKKMGFEDLIIKLQIQKD--NKRAISKGKQPMEARVNLVDSKGNANKKR--- 545
           F + LK K ++   E LI  L +++    K A SKG    ++  N+V    N +K +   
Sbjct: 161 FGTALKHKRQEYSVEGLIASLDVEEKAREKDAASKGDGG-QSSANVVHKAQNKSKGKYKA 219

Query: 544 ------KYQGDGKSQPKERFKGTCHHCGKPGHMIXXXXXXXXXXXXXXXXXXXXXXXXKH 383
                 K Q   K+ P +  + TC  CG+ GH+                          +
Sbjct: 220 QQTTNFKKQKKNKNNPNQDER-TCFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGN 278

Query: 382 EGSPSNLDDMIVDFSAVVLEANLVENLR*WWIDTGATRHICSDKSAFSSYTLITGKKLFM 203
            G  S   ++   FS        V     WW+DTGA  H+C+D S FSSY +  G  + M
Sbjct: 279 TGDGSGYGNLPTVFS--------VNQSTNWWVDTGANVHVCADISLFSSYQVARGSTVLM 330

Query: 202 GNNATSEVQGVGKVILKMTSSKELTLKEVLHVPDIRKNLVSGPLLIKAGFRLVFESNKFV 23
           GN + + V GVG V LK TS K + LK V HVP I +NLVSG  L + GF+LVFESNK V
Sbjct: 331 GNGSHASVHGVGTVYLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVV 390

Query: 22  LTKNGIF 2
           ++K+G F
Sbjct: 391 VSKHGYF 397


>gb|AAX92828.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] gi|62733724|gb|AAX95834.1|
           retrotransposon protein, putative, Ty1-copia sub-class
           [Oryza sativa Japonica Group] gi|77550359|gb|ABA93156.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 1277

 Score =  125 bits (313), Expect = 2e-26
 Identities = 86/247 (34%), Positives = 119/247 (48%), Gaps = 11/247 (4%)
 Frame = -2

Query: 709 FMSYLKLKTKKMGFEDLIIKLQIQKD--NKRAISKGKQPMEARVNLVDSKGNANKKR--- 545
           F + LK K ++   E LI  L +++    K A SKG    ++  N+V    N +K +   
Sbjct: 161 FGTALKHKRQEYSVEGLIASLDVEEKAREKDAASKGDGG-QSSANVVHKAQNKSKGKYKA 219

Query: 544 ------KYQGDGKSQPKERFKGTCHHCGKPGHMIXXXXXXXXXXXXXXXXXXXXXXXXKH 383
                 K Q   K+ P +  + TC  CG+ GH+                          +
Sbjct: 220 QQTTNFKKQKKNKNNPNQDER-TCFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGN 278

Query: 382 EGSPSNLDDMIVDFSAVVLEANLVENLR*WWIDTGATRHICSDKSAFSSYTLITGKKLFM 203
            G  S   ++   FS        V     WW+DTGA  H+C+D S FSSY +  G  + M
Sbjct: 279 TGDGSGYGNLPTVFS--------VNQSTNWWVDTGANVHVCADISLFSSYQVARGSTVLM 330

Query: 202 GNNATSEVQGVGKVILKMTSSKELTLKEVLHVPDIRKNLVSGPLLIKAGFRLVFESNKFV 23
           GN + + V GVG V LK TS K + LK V HVP I +NLVSG  L + GF+LVFESNK V
Sbjct: 331 GNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVV 390

Query: 22  LTKNGIF 2
           ++K+G F
Sbjct: 391 VSKHGYF 397


>gb|AAT39267.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|50878407|gb|AAT85181.1| putative polyprotein [Oryza
           sativa Japonica Group]
          Length = 1297

 Score =  125 bits (313), Expect = 2e-26
 Identities = 86/247 (34%), Positives = 120/247 (48%), Gaps = 11/247 (4%)
 Frame = -2

Query: 709 FMSYLKLKTKKMGFEDLIIKLQIQKD--NKRAISKGKQPMEARVNLVDSKGNANKKRKYQ 536
           F + LK K ++   E LI  L +++    K A SKG    ++  N+V    N +K+ KY+
Sbjct: 161 FGTALKHKRQEYSVEGLIASLDVEEKAREKDAASKGDGG-QSSANVVHKAQNKSKE-KYK 218

Query: 535 GDGKSQPKERFKG---------TCHHCGKPGHMIXXXXXXXXXXXXXXXXXXXXXXXXKH 383
               +  K++ K          TC  CG+ GH+                          +
Sbjct: 219 AQQTTNFKKQKKNNNNPNQDERTCFVCGQVGHLARKCPQHKGMKAPAGQTSKSANVTIGN 278

Query: 382 EGSPSNLDDMIVDFSAVVLEANLVENLR*WWIDTGATRHICSDKSAFSSYTLITGKKLFM 203
            G  S   ++   FS        V     WW+DTGA  H+C+D S FSSY +  G  + M
Sbjct: 279 TGDGSGYGNLPTVFS--------VNQSTNWWVDTGANVHVCADISLFSSYQVARGSTVLM 330

Query: 202 GNNATSEVQGVGKVILKMTSSKELTLKEVLHVPDIRKNLVSGPLLIKAGFRLVFESNKFV 23
           GN + + V GVG V LK TS K + LK V HVP I +NLVSG  L + GF+LVFESNK V
Sbjct: 331 GNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVV 390

Query: 22  LTKNGIF 2
           ++K+G F
Sbjct: 391 VSKHGYF 397


>gb|ABA96779.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1468

 Score =  124 bits (311), Expect = 3e-26
 Identities = 85/245 (34%), Positives = 115/245 (46%), Gaps = 9/245 (3%)
 Frame = -2

Query: 709 FMSYLKLKTKKMGFEDLIIKLQIQKD--NKRAISKGK--QPMEARVNLVDSKGNANKKRK 542
           F + LK K ++   E LI  L +++    K A SKG   Q     V+   +K     K +
Sbjct: 248 FGTALKHKRQEYSVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHKAQNKSKGKYKAQ 307

Query: 541 YQGDGKSQPKERF-----KGTCHHCGKPGHMIXXXXXXXXXXXXXXXXXXXXXXXXKHEG 377
              + K Q K        + TC  CG+ GH+                          + G
Sbjct: 308 QTTNFKKQKKNNINPNQDERTCFVCGQVGHLARKCLQCKGMKAPAGQTSKSANVTIGNTG 367

Query: 376 SPSNLDDMIVDFSAVVLEANLVENLR*WWIDTGATRHICSDKSAFSSYTLITGKKLFMGN 197
             S   ++   FS        V     WW+DTGA  H+C+D S FSSY +  G  + MGN
Sbjct: 368 DGSGYGNLPTVFS--------VNQSTNWWVDTGANVHVCADISLFSSYQVARGSTVLMGN 419

Query: 196 NATSEVQGVGKVILKMTSSKELTLKEVLHVPDIRKNLVSGPLLIKAGFRLVFESNKFVLT 17
            + + V GVG V LK TS K + LK V HVP I +NLVSG  L + GF+LVFESNK V++
Sbjct: 420 GSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVS 479

Query: 16  KNGIF 2
           K+G F
Sbjct: 480 KHGYF 484


>gb|ABF97537.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1397

 Score =  124 bits (311), Expect = 3e-26
 Identities = 86/247 (34%), Positives = 119/247 (48%), Gaps = 11/247 (4%)
 Frame = -2

Query: 709 FMSYLKLKTKKMGFEDLIIKLQIQKD--NKRAISKGKQPMEARVNLVDSKGNANKKRKYQ 536
           F + LK K ++   E LI  L +++    K A SKG    ++  N+V    N +K  KY+
Sbjct: 238 FGTALKRKRQEYSVEGLIASLDVEEKAREKDAASKGDGG-QSSANVVHKAQNKSKG-KYK 295

Query: 535 GDGKSQPKERFKG---------TCHHCGKPGHMIXXXXXXXXXXXXXXXXXXXXXXXXKH 383
               +  K++ K          TC  CG+ GH+                          +
Sbjct: 296 AQQTTNFKKQKKNNNNPNQDERTCFVCGQVGHLARKCPQRKGMKAPAGQTFKSANVTIGN 355

Query: 382 EGSPSNLDDMIVDFSAVVLEANLVENLR*WWIDTGATRHICSDKSAFSSYTLITGKKLFM 203
            G  S   ++   FS        V     WW+DTGA  H+C+D S FSSY +  G  + M
Sbjct: 356 TGDGSGYGNLPTVFS--------VNQSTNWWVDTGANVHVCADISLFSSYQVARGSTVLM 407

Query: 202 GNNATSEVQGVGKVILKMTSSKELTLKEVLHVPDIRKNLVSGPLLIKAGFRLVFESNKFV 23
           GN + + V GVG V LK TS K + LK V HVP I +NLVSG  L + GF+LVFESNK V
Sbjct: 408 GNGSHASVHGVGTVDLKFTSEKIVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVV 467

Query: 22  LTKNGIF 2
           ++K+G F
Sbjct: 468 VSKHGYF 474


>gb|AAT93940.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1861

 Score =  124 bits (311), Expect = 3e-26
 Identities = 87/247 (35%), Positives = 119/247 (48%), Gaps = 11/247 (4%)
 Frame = -2

Query: 709  FMSYLKLKTKKMGFEDLIIKLQIQKD--NKRAISKGKQPMEARVNLVDSKGNANKKRKYQ 536
            F + LK K ++   E LI  L +++    K A SKG    ++  N+V    N +K  KY+
Sbjct: 575  FGTALKHKRQEYSVEGLIASLDVEEKAREKDAASKGDGG-QSSANVVHKAQNKSKG-KYK 632

Query: 535  GDGKSQPKERFKG---------TCHHCGKPGHMIXXXXXXXXXXXXXXXXXXXXXXXXKH 383
                +  K++ K          TC  CG+ GH+                          +
Sbjct: 633  AQQTTNFKKQKKNNNNPNQDERTCFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGN 692

Query: 382  EGSPSNLDDMIVDFSAVVLEANLVENLR*WWIDTGATRHICSDKSAFSSYTLITGKKLFM 203
             G  S   ++   FS        V     WWIDTGA  H+C+D S FSSY +  G  + M
Sbjct: 693  TGDGSGYGNLPTVFS--------VNQSTNWWIDTGANIHVCADISLFSSYQVARGSTVLM 744

Query: 202  GNNATSEVQGVGKVILKMTSSKELTLKEVLHVPDIRKNLVSGPLLIKAGFRLVFESNKFV 23
            GN + + V GVG V LK TS K + LK V HVP I +NLVSG  L + GF+LVFESNK V
Sbjct: 745  GNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVV 804

Query: 22   LTKNGIF 2
            ++K+G F
Sbjct: 805  VSKHGYF 811