BLASTX nr result
ID: Atropa21_contig00003114
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00003114
(505 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006340082.1| PREDICTED: uncharacterized protein LOC102594... 153 2e-35
ref|XP_004250878.1| PREDICTED: signal recognition particle 72 kD... 106 4e-21
ref|XP_006340083.1| PREDICTED: signal recognition particle subun... 103 2e-20
gb|EMJ26348.1| hypothetical protein PRUPE_ppa002478mg [Prunus pe... 89 8e-16
gb|EMJ26347.1| hypothetical protein PRUPE_ppa002478mg [Prunus pe... 89 8e-16
gb|EXB82414.1| Signal recognition particle 72 kDa protein [Morus... 87 2e-15
ref|XP_004310033.1| PREDICTED: signal recognition particle 72 kD... 85 1e-14
gb|EOY00810.1| SRP72 RNA-binding domain isoform 2 [Theobroma cacao] 84 1e-14
gb|EOY00809.1| SRP72 RNA-binding domain isoform 1 [Theobroma cacao] 84 1e-14
ref|XP_006484027.1| PREDICTED: signal recognition particle subun... 84 3e-14
ref|XP_006438127.1| hypothetical protein CICLE_v100309552mg, par... 84 3e-14
ref|XP_002271378.1| PREDICTED: signal recognition particle 72 kD... 83 3e-14
gb|EPS72346.1| hypothetical protein M569_02406 [Genlisea aurea] 83 4e-14
ref|XP_004135297.1| PREDICTED: signal recognition particle 72 kD... 82 1e-13
ref|XP_004504485.1| PREDICTED: signal recognition particle 72 kD... 81 2e-13
ref|NP_176936.1| SRP72 RNA-binding domain-containing protein [Ar... 79 6e-13
ref|XP_006300835.1| hypothetical protein CARUB_v10019924mg [Caps... 78 1e-12
ref|XP_003524881.1| PREDICTED: signal recognition particle subun... 78 1e-12
ref|XP_002888616.1| hypothetical protein ARALYDRAFT_475871 [Arab... 78 1e-12
ref|XP_002888615.1| predicted protein [Arabidopsis lyrata subsp.... 78 1e-12
>ref|XP_006340082.1| PREDICTED: uncharacterized protein LOC102594494 [Solanum tuberosum]
Length = 407
Score = 153 bits (387), Expect = 2e-35
Identities = 78/92 (84%), Positives = 84/92 (91%)
Frame = -3
Query: 503 RKRGRERQNIQRALTQLIQDLHLIQRGGSPRGRGLVTDQRERIREQLKLEVLRVQWLKRR 324
RKRGRE QNIQRALTQLIQDLH IQRGG PRGRGLVTDQRERIREQLKLEVL+VQWLKR+
Sbjct: 223 RKRGRESQNIQRALTQLIQDLHPIQRGGFPRGRGLVTDQRERIREQLKLEVLKVQWLKRQ 282
Query: 323 GAVVIRNQTRQLIQKEPLRIQAMCNQRLHPNL 228
A+ IR+QT QLIQKEPLR+Q CN+RLHPNL
Sbjct: 283 RAIAIRSQTNQLIQKEPLRMQ--CNRRLHPNL 312
>ref|XP_004250878.1| PREDICTED: signal recognition particle 72 kDa protein-like [Solanum
lycopersicum]
Length = 664
Score = 106 bits (264), Expect = 4e-21
Identities = 51/60 (85%), Positives = 55/60 (91%)
Frame = -2
Query: 429 ERWLPKRERSSYRPKRKDKRAAQIRGSQGAVAKEAGSSSDTKSNQTANSKGTSQNSGNVQ 250
ERWLPKRERSSYRPKRKDKRAAQ+RGSQGAVAKEA S+SD KSNQ AN KG SQ++GNVQ
Sbjct: 591 ERWLPKRERSSYRPKRKDKRAAQVRGSQGAVAKEAASNSDAKSNQPANPKGASQHAGNVQ 650
>ref|XP_006340083.1| PREDICTED: signal recognition particle subunit SRP72-like [Solanum
tuberosum]
Length = 592
Score = 103 bits (257), Expect = 2e-20
Identities = 51/56 (91%), Positives = 52/56 (92%)
Frame = -2
Query: 429 ERWLPKRERSSYRPKRKDKRAAQIRGSQGAVAKEAGSSSDTKSNQTANSKGTSQNS 262
ERWLPKRERSSYRPKRKDKRAAQIRGSQGAVAKEA SSSDTKSNQ AN KG SQN+
Sbjct: 521 ERWLPKRERSSYRPKRKDKRAAQIRGSQGAVAKEAASSSDTKSNQPANPKGASQNA 576
>gb|EMJ26348.1| hypothetical protein PRUPE_ppa002478mg [Prunus persica]
Length = 668
Score = 88.6 bits (218), Expect = 8e-16
Identities = 46/62 (74%), Positives = 53/62 (85%), Gaps = 6/62 (9%)
Frame = -2
Query: 429 ERWLPKRERSSYRPKRKDKRAAQIRGSQGAVAK---EAGSSSDT---KSNQTANSKGTSQ 268
ERWLPKRERSSYRPKRKDKRAAQ+RGSQG+VA+ EAG++S+T KSNQT SKG SQ
Sbjct: 589 ERWLPKRERSSYRPKRKDKRAAQVRGSQGSVARDKHEAGATSNTSNSKSNQTTTSKGASQ 648
Query: 267 NS 262
N+
Sbjct: 649 NA 650
>gb|EMJ26347.1| hypothetical protein PRUPE_ppa002478mg [Prunus persica]
Length = 594
Score = 88.6 bits (218), Expect = 8e-16
Identities = 46/62 (74%), Positives = 53/62 (85%), Gaps = 6/62 (9%)
Frame = -2
Query: 429 ERWLPKRERSSYRPKRKDKRAAQIRGSQGAVAK---EAGSSSDT---KSNQTANSKGTSQ 268
ERWLPKRERSSYRPKRKDKRAAQ+RGSQG+VA+ EAG++S+T KSNQT SKG SQ
Sbjct: 515 ERWLPKRERSSYRPKRKDKRAAQVRGSQGSVARDKHEAGATSNTSNSKSNQTTTSKGASQ 574
Query: 267 NS 262
N+
Sbjct: 575 NA 576
>gb|EXB82414.1| Signal recognition particle 72 kDa protein [Morus notabilis]
Length = 671
Score = 87.4 bits (215), Expect = 2e-15
Identities = 47/69 (68%), Positives = 53/69 (76%), Gaps = 9/69 (13%)
Frame = -2
Query: 429 ERWLPKRERSSYRPKRKDKRAAQIRGSQGAVAKE------AGSSS---DTKSNQTANSKG 277
ERWLPKRERSSYRPKRKDKRAAQ+RGSQGAV +E AG+SS ++KSNQ SKG
Sbjct: 590 ERWLPKRERSSYRPKRKDKRAAQVRGSQGAVVREKHEAGPAGASSSAANSKSNQATTSKG 649
Query: 276 TSQNSGNVQ 250
SQNS + Q
Sbjct: 650 ASQNSSSEQ 658
>ref|XP_004310033.1| PREDICTED: signal recognition particle 72 kDa protein-like
[Fragaria vesca subsp. vesca]
Length = 661
Score = 84.7 bits (208), Expect = 1e-14
Identities = 47/61 (77%), Positives = 52/61 (85%), Gaps = 5/61 (8%)
Frame = -2
Query: 429 ERWLPKRERSSYRPKRKDKR-AAQIRGSQGAVAK---EAG-SSSDTKSNQTANSKGTSQN 265
ERWLPKRERSSYRPKRKDKR AAQ+RGSQG+VA+ EAG +SS+ KSNQ A SKG SQN
Sbjct: 584 ERWLPKRERSSYRPKRKDKRAAAQVRGSQGSVARDKHEAGATSSNAKSNQAATSKGASQN 643
Query: 264 S 262
S
Sbjct: 644 S 644
>gb|EOY00810.1| SRP72 RNA-binding domain isoform 2 [Theobroma cacao]
Length = 667
Score = 84.3 bits (207), Expect = 1e-14
Identities = 43/65 (66%), Positives = 49/65 (75%), Gaps = 9/65 (13%)
Frame = -2
Query: 429 ERWLPKRERSSYRPKRKDKRAAQIRGSQGAVAKEA---------GSSSDTKSNQTANSKG 277
ERWLPKRERSSYRPKRKDKRAAQ+RGSQGAV +E +SS+ KSNQ +SKG
Sbjct: 587 ERWLPKRERSSYRPKRKDKRAAQVRGSQGAVVREKSEASASATNSNSSNLKSNQATSSKG 646
Query: 276 TSQNS 262
SQN+
Sbjct: 647 VSQNA 651
>gb|EOY00809.1| SRP72 RNA-binding domain isoform 1 [Theobroma cacao]
Length = 670
Score = 84.3 bits (207), Expect = 1e-14
Identities = 43/65 (66%), Positives = 49/65 (75%), Gaps = 9/65 (13%)
Frame = -2
Query: 429 ERWLPKRERSSYRPKRKDKRAAQIRGSQGAVAKEA---------GSSSDTKSNQTANSKG 277
ERWLPKRERSSYRPKRKDKRAAQ+RGSQGAV +E +SS+ KSNQ +SKG
Sbjct: 590 ERWLPKRERSSYRPKRKDKRAAQVRGSQGAVVREKSEASASATNSNSSNLKSNQATSSKG 649
Query: 276 TSQNS 262
SQN+
Sbjct: 650 VSQNA 654
>ref|XP_006484027.1| PREDICTED: signal recognition particle subunit SRP72-like [Citrus
sinensis]
Length = 666
Score = 83.6 bits (205), Expect = 3e-14
Identities = 41/61 (67%), Positives = 50/61 (81%), Gaps = 6/61 (9%)
Frame = -2
Query: 429 ERWLPKRERSSYRPKRKDKRAAQIRGSQGAVAKE------AGSSSDTKSNQTANSKGTSQ 268
ERWLPKRERSSYRP+RKDKRAAQ+RGSQGAV +E AG+SS++ S+Q +SKG +Q
Sbjct: 588 ERWLPKRERSSYRPRRKDKRAAQVRGSQGAVVREKHDAGAAGASSNSTSSQATSSKGAAQ 647
Query: 267 N 265
N
Sbjct: 648 N 648
>ref|XP_006438127.1| hypothetical protein CICLE_v100309552mg, partial [Citrus
clementina] gi|557540323|gb|ESR51367.1| hypothetical
protein CICLE_v100309552mg, partial [Citrus clementina]
Length = 208
Score = 83.6 bits (205), Expect = 3e-14
Identities = 41/61 (67%), Positives = 50/61 (81%), Gaps = 6/61 (9%)
Frame = -2
Query: 429 ERWLPKRERSSYRPKRKDKRAAQIRGSQGAVAKE------AGSSSDTKSNQTANSKGTSQ 268
ERWLPKRERSSYRP+RKDKRAAQ+RGSQGAV +E AG+SS++ S+Q +SKG +Q
Sbjct: 130 ERWLPKRERSSYRPRRKDKRAAQVRGSQGAVVREKHDAGAAGASSNSTSSQATSSKGAAQ 189
Query: 267 N 265
N
Sbjct: 190 N 190
>ref|XP_002271378.1| PREDICTED: signal recognition particle 72 kDa protein [Vitis
vinifera]
Length = 673
Score = 83.2 bits (204), Expect = 3e-14
Identities = 44/65 (67%), Positives = 52/65 (80%), Gaps = 9/65 (13%)
Frame = -2
Query: 429 ERWLPKRERSSYRPKRKDKRAAQIRGSQGAVAKE----AGS-----SSDTKSNQTANSKG 277
ERWLPKRERSSYRPKRKDKRAAQ+RGSQGAV +E AGS +S++KS+Q SKG
Sbjct: 591 ERWLPKRERSSYRPKRKDKRAAQVRGSQGAVVREKHEAAGSDTSANTSNSKSDQATTSKG 650
Query: 276 TSQNS 262
+SQN+
Sbjct: 651 SSQNA 655
>gb|EPS72346.1| hypothetical protein M569_02406 [Genlisea aurea]
Length = 658
Score = 82.8 bits (203), Expect = 4e-14
Identities = 43/54 (79%), Positives = 45/54 (83%)
Frame = -2
Query: 429 ERWLPKRERSSYRPKRKDKRAAQIRGSQGAVAKEAGSSSDTKSNQTANSKGTSQ 268
ERWLPKRERS+YRPKRKDKRAAQ+RGSQGAVAKEA NQTANSK TSQ
Sbjct: 595 ERWLPKRERSTYRPKRKDKRAAQVRGSQGAVAKEA--------NQTANSKTTSQ 640
>ref|XP_004135297.1| PREDICTED: signal recognition particle 72 kDa protein-like [Cucumis
sativus] gi|449530207|ref|XP_004172087.1| PREDICTED:
signal recognition particle 72 kDa protein-like [Cucumis
sativus]
Length = 667
Score = 81.6 bits (200), Expect = 1e-13
Identities = 39/65 (60%), Positives = 52/65 (80%), Gaps = 9/65 (13%)
Frame = -2
Query: 429 ERWLPKRERSSYRPKRKDKRAAQIRGSQGAVAKE---------AGSSSDTKSNQTANSKG 277
ERWLP+RERSSYRPKRKDKRAAQ+RGSQGA+ +E + +++++KSNQ +SKG
Sbjct: 587 ERWLPRRERSSYRPKRKDKRAAQVRGSQGAMVREKHETSVSGGSSNNANSKSNQAMSSKG 646
Query: 276 TSQNS 262
T+QN+
Sbjct: 647 TNQNT 651
>ref|XP_004504485.1| PREDICTED: signal recognition particle 72 kDa protein-like [Cicer
arietinum]
Length = 664
Score = 80.9 bits (198), Expect = 2e-13
Identities = 43/66 (65%), Positives = 52/66 (78%), Gaps = 6/66 (9%)
Frame = -2
Query: 429 ERWLPKRERSSYRPKRKDKRAAQIRGSQGAVAKE---AGSS---SDTKSNQTANSKGTSQ 268
ERWLPKRERS++RPKRKDKRAAQ+RGSQGAV +E AGSS S+ KSNQ SKG +Q
Sbjct: 586 ERWLPKRERSTFRPKRKDKRAAQVRGSQGAVVREKQDAGSSSSHSNPKSNQATTSKGATQ 645
Query: 267 NSGNVQ 250
++ + Q
Sbjct: 646 SAVSEQ 651
>ref|NP_176936.1| SRP72 RNA-binding domain-containing protein [Arabidopsis thaliana]
gi|11072013|gb|AAG28892.1|AC008113_8 F12A21.17
[Arabidopsis thaliana] gi|28392947|gb|AAO41909.1|
unknown protein [Arabidopsis thaliana]
gi|28827690|gb|AAO50689.1| unknown protein [Arabidopsis
thaliana] gi|332196560|gb|AEE34681.1| SRP72 RNA-binding
domain-containing protein [Arabidopsis thaliana]
Length = 664
Score = 79.0 bits (193), Expect = 6e-13
Identities = 39/55 (70%), Positives = 46/55 (83%), Gaps = 2/55 (3%)
Frame = -2
Query: 429 ERWLPKRERSSYRPKRKDKRAAQIRGSQGAVA--KEAGSSSDTKSNQTANSKGTS 271
ERWLP+RERSSY+PKRKDKRAAQIRGSQGAV K+ + S +KSNQ A+SKG +
Sbjct: 596 ERWLPRRERSSYKPKRKDKRAAQIRGSQGAVTKDKQEAAPSTSKSNQVASSKGNA 650
>ref|XP_006300835.1| hypothetical protein CARUB_v10019924mg [Capsella rubella]
gi|482569545|gb|EOA33733.1| hypothetical protein
CARUB_v10019924mg [Capsella rubella]
Length = 656
Score = 78.2 bits (191), Expect = 1e-12
Identities = 40/52 (76%), Positives = 45/52 (86%), Gaps = 2/52 (3%)
Frame = -2
Query: 429 ERWLPKRERSSYRPKRKDKRAAQIRGSQGAVA--KEAGSSSDTKSNQTANSK 280
ERWLP+RERSSYRPKRKDKRAAQIRGSQGAVA K+ + S +KSNQ A+SK
Sbjct: 587 ERWLPRRERSSYRPKRKDKRAAQIRGSQGAVAKDKQEAAPSTSKSNQGASSK 638
>ref|XP_003524881.1| PREDICTED: signal recognition particle subunit SRP72-like [Glycine
max]
Length = 662
Score = 78.2 bits (191), Expect = 1e-12
Identities = 41/66 (62%), Positives = 51/66 (77%), Gaps = 6/66 (9%)
Frame = -2
Query: 429 ERWLPKRERSSYRPKRKDKRAAQIRGSQGAVAKE------AGSSSDTKSNQTANSKGTSQ 268
ERWLPKRERS+YRPKRKDKRAAQ+RGSQGAV ++ + +SS+ KSNQ SKG +Q
Sbjct: 585 ERWLPKRERSTYRPKRKDKRAAQVRGSQGAVVRDKHDTGASSNSSNLKSNQ-GTSKGAAQ 643
Query: 267 NSGNVQ 250
N+ + Q
Sbjct: 644 NAVSEQ 649
>ref|XP_002888616.1| hypothetical protein ARALYDRAFT_475871 [Arabidopsis lyrata subsp.
lyrata] gi|297334457|gb|EFH64875.1| hypothetical protein
ARALYDRAFT_475871 [Arabidopsis lyrata subsp. lyrata]
Length = 652
Score = 77.8 bits (190), Expect = 1e-12
Identities = 39/55 (70%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Frame = -2
Query: 429 ERWLPKRERSSYRPKRKDKRAAQIRGSQGAVA--KEAGSSSDTKSNQTANSKGTS 271
ERWLP+RERSSYRPKRKDKRAAQIRGSQGAV K+ + S +KSNQ A+SK +
Sbjct: 584 ERWLPRRERSSYRPKRKDKRAAQIRGSQGAVTKDKQEAAPSTSKSNQAASSKANA 638
>ref|XP_002888615.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297334456|gb|EFH64874.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 596
Score = 77.8 bits (190), Expect = 1e-12
Identities = 39/55 (70%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Frame = -2
Query: 429 ERWLPKRERSSYRPKRKDKRAAQIRGSQGAV--AKEAGSSSDTKSNQTANSKGTS 271
ERWLP+RERSSYRPKRKDKRAAQIRGSQGAV K+ + S +KSNQ A+SK +
Sbjct: 527 ERWLPRRERSSYRPKRKDKRAAQIRGSQGAVTKVKQEAAPSTSKSNQAASSKANA 581