BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00002902
         (1344 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004234968.1| PREDICTED: ATP-dependent Clp protease ATP-bi...   596   e-168
ref|XP_006350541.1| PREDICTED: ATP-dependent Clp protease ATP-bi...   596   e-168
ref|XP_002272792.1| PREDICTED: ATP-dependent Clp protease ATP-bi...   446   e-122
emb|CBI23009.3| unnamed protein product [Vitis vinifera]              442   e-121
ref|NP_568792.1| CLP protease regulatory subunit X [Arabidopsis ...   438   e-120
ref|XP_002864237.1| hypothetical protein ARALYDRAFT_918413 [Arab...   438   e-120
ref|XP_002516670.1| ATP-dependent clp protease ATP-binding subun...   438   e-120
ref|XP_006441090.1| hypothetical protein CICLE_v10019480mg [Citr...   438   e-120
ref|XP_006441089.1| hypothetical protein CICLE_v10019480mg [Citr...   438   e-120
gb|AAB88706.1| CLP protease regulatory subunit CLPX [Arabidopsis...   435   e-119
ref|XP_006401716.1| hypothetical protein EUTSA_v10013106mg [Eutr...   434   e-119
gb|EOY23554.1| CLP protease regulatory subunit X isoform 3 [Theo...   434   e-119
gb|EOY23553.1| CLP protease regulatory subunit X isoform 2 [Theo...   434   e-119
gb|EOY23552.1| CLP protease regulatory subunit X isoform 1 [Theo...   434   e-119
gb|EMJ20072.1| hypothetical protein PRUPE_ppa003261mg [Prunus pe...   432   e-118
ref|XP_006280226.1| hypothetical protein CARUB_v10026143mg [Caps...   432   e-118
ref|XP_003634146.1| PREDICTED: ATP-dependent Clp protease ATP-bi...   429   e-117
ref|XP_004307989.1| PREDICTED: ATP-dependent Clp protease ATP-bi...   426   e-116
ref|XP_002321405.2| hypothetical protein POPTR_0015s01520g [Popu...   411   e-112
ref|XP_004502651.1| PREDICTED: ATP-dependent Clp protease ATP-bi...   411   e-112

>ref|XP_004234968.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
            [Solanum lycopersicum]
          Length = 570

 Score =  596 bits (1537), Expect = e-168
 Identities = 309/372 (83%), Positives = 323/372 (86%), Gaps = 13/372 (3%)
 Frame = -2

Query: 1079 MAAVLRSKSSKHTASIAITHFRYFIINDFHTSCLPNFHLCNRTKWDN-------NSSLFK 921
            MAAVLRSKSS+ TAS+AITHFRYFIINDFHT  LPNFHLC+RTKWDN       +SSLFK
Sbjct: 1    MAAVLRSKSSRRTASMAITHFRYFIINDFHTGHLPNFHLCSRTKWDNLVSNSGHSSSLFK 60

Query: 920  PVSF----VDRCYDNFKNSNRKNKEKLSMSSSYGDPPEIWQPPGEGIVVRPGVKFVQMXX 753
            PVSF    VDRCYDN KNS+RK+KEK++MSS+YG+PPEIWQPPGEGIVVRPGVKFVQ+  
Sbjct: 61   PVSFRGEFVDRCYDNLKNSSRKSKEKINMSSNYGEPPEIWQPPGEGIVVRPGVKFVQVGE 120

Query: 752  XXXXXXXXXXXXXXXXXXXXXXXS--YLGTQFPTPKQLCKGLDTFVIGQERAKKVLSVAV 579
                                       LGTQFPTPKQLC+GLD FVIGQERAKKVLSVAV
Sbjct: 121  GEVPGSGSGSGGGFGSGSKDGSWGGSNLGTQFPTPKQLCRGLDKFVIGQERAKKVLSVAV 180

Query: 578  YNHYKRIYNDSSHKWPAGNDSSEKADGAENEIVELEKSNVLLMGPTGSGKTLLAKTLARL 399
            YNHYKRIYNDSSHKWPAGNDSSEK DG ENE VELEKSN+LLMGPTGSGKTLLAKTLARL
Sbjct: 181  YNHYKRIYNDSSHKWPAGNDSSEKTDGVENESVELEKSNILLMGPTGSGKTLLAKTLARL 240

Query: 398  VNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVAAAQQGIVYIDEVDKITKKAES 219
            VNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVAAAQQGIVYIDEVDKITKKAES
Sbjct: 241  VNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVAAAQQGIVYIDEVDKITKKAES 300

Query: 218  LNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFLCGGAFIDLE 39
            LNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILF+CGGAFIDLE
Sbjct: 301  LNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFIDLE 360

Query: 38   KTISERCQDSSI 3
            KTISER QDSSI
Sbjct: 361  KTISERRQDSSI 372


>ref|XP_006350541.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpX-like,
            mitochondrial-like [Solanum tuberosum]
          Length = 571

 Score =  596 bits (1536), Expect = e-168
 Identities = 311/373 (83%), Positives = 322/373 (86%), Gaps = 14/373 (3%)
 Frame = -2

Query: 1079 MAAVLRSKSSKHTASIAITHFRYFIINDFHTSCLPNFHLCNRTKWDN-------NSSLFK 921
            MAAVLRSKSS+HTAS+AI HFRYFIINDFH   LPNFHLCNRTKWDN       +SSLFK
Sbjct: 1    MAAVLRSKSSRHTASMAIAHFRYFIINDFHAGHLPNFHLCNRTKWDNLVSNSGHSSSLFK 60

Query: 920  PVSF----VDRCYDNFKNS---NRKNKEKLSMSSSYGDPPEIWQPPGEGIVVRPGVKFVQ 762
             VSF    VDRCYDN KNS   +RK+KEK+SMSS+YG+PPEIWQPPGEGIVVRPGVKFVQ
Sbjct: 61   SVSFRSEFVDRCYDNLKNSQNSSRKSKEKISMSSNYGEPPEIWQPPGEGIVVRPGVKFVQ 120

Query: 761  MXXXXXXXXXXXXXXXXXXXXXXXXXSYLGTQFPTPKQLCKGLDTFVIGQERAKKVLSVA 582
            +                         S LGTQFPTPKQLCKGLD FVIGQERAKKVLSVA
Sbjct: 121  VGEGEGPGSGSGGGFGSGSKDGSWGGSNLGTQFPTPKQLCKGLDKFVIGQERAKKVLSVA 180

Query: 581  VYNHYKRIYNDSSHKWPAGNDSSEKADGAENEIVELEKSNVLLMGPTGSGKTLLAKTLAR 402
            VYNHYKRIYNDSSHKWPAGNDSSEK DG ENE VELEKSN+LLMGPTGSGKTLLAKTLAR
Sbjct: 181  VYNHYKRIYNDSSHKWPAGNDSSEKTDGIENESVELEKSNILLMGPTGSGKTLLAKTLAR 240

Query: 401  LVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVAAAQQGIVYIDEVDKITKKAE 222
            LVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVAAAQQGIVYIDEVDKITKKAE
Sbjct: 241  LVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVAAAQQGIVYIDEVDKITKKAE 300

Query: 221  SLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFLCGGAFIDL 42
            SLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILF+CGGAFIDL
Sbjct: 301  SLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFIDL 360

Query: 41   EKTISERCQDSSI 3
            EKTISER QDSSI
Sbjct: 361  EKTISERRQDSSI 373


>ref|XP_002272792.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
            isoform 1 [Vitis vinifera]
          Length = 583

 Score =  446 bits (1146), Expect = e-122
 Identities = 246/385 (63%), Positives = 281/385 (72%), Gaps = 26/385 (6%)
 Frame = -2

Query: 1079 MAAVLRSKSSKHTASIAITHFRYFIINDFHTSCLPNFHLCNRTKWDN---------NSSL 927
            MAA LRSKSS+ TA +  + FRYFI+N  H   LPN ++ ++   D+         + + 
Sbjct: 1    MAAALRSKSSRETALLTFSQFRYFILNHMHAGRLPNSYISHKPNCDHCFTHSHTPYHFTS 60

Query: 926  FKPVSF----VDR---CYDN-------FKNSNRKNKEKLSMSSSYGDPPEIWQPPGEGIV 789
            FKPVS     VD+    +DN       F  +  K   + ++ +S+GDPPE+W   G+GIV
Sbjct: 61   FKPVSLRGELVDKGLEFFDNQRFSKVGFSTNESKKLSRDTILNSFGDPPEVWS--GDGIV 118

Query: 788  VRPG---VKFVQMXXXXXXXXXXXXXXXXXXXXXXXXXSYLGTQFPTPKQLCKGLDTFVI 618
            VR G      V+                          S LG  FPTPK++C+GLD FVI
Sbjct: 119  VRQGGSGSNLVRGGGGAGANGGAGSGFGSNSKDESWGGSNLGHNFPTPKEICRGLDKFVI 178

Query: 617  GQERAKKVLSVAVYNHYKRIYNDSSHKWPAGNDSSEKADGAENEIVELEKSNVLLMGPTG 438
            GQERAKKVLSVAVYNHYKRIY+ S  KWPA + S +KA+  +N+ VELEKSN+LLMGPTG
Sbjct: 179  GQERAKKVLSVAVYNHYKRIYHQSLQKWPAEDTSDDKAEATDNDSVELEKSNILLMGPTG 238

Query: 437  SGKTLLAKTLARLVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVAAAQQGIVY 258
            SGKTLLAKTLAR VNVPFVIADATTLTQAGYVGEDVESILYKLL VADYNVAAAQQGIVY
Sbjct: 239  SGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMVADYNVAAAQQGIVY 298

Query: 257  IDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKD 78
            IDEVDKITKKAESLN+SRDVSGEGVQQALLKMLEGT+VNVPEKGARKHPRGDNIQIDTKD
Sbjct: 299  IDEVDKITKKAESLNLSRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKD 358

Query: 77   ILFLCGGAFIDLEKTISERCQDSSI 3
            ILF+CGGAFIDLEKTISER QDSSI
Sbjct: 359  ILFICGGAFIDLEKTISERRQDSSI 383


>emb|CBI23009.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  442 bits (1138), Expect = e-121
 Identities = 245/385 (63%), Positives = 280/385 (72%), Gaps = 26/385 (6%)
 Frame = -2

Query: 1079 MAAVLRSKSSKHTASIAITHFRYFIINDFHTSCLPNFHLCNRTKWDN---------NSSL 927
            MAA LRSKSS+ TA +  + FRYFI+N  H   LPN ++ ++   D+         + + 
Sbjct: 1    MAAALRSKSSRETALLTFSQFRYFILNHMHAGRLPNSYISHKPNCDHCFTHSHTPYHFTS 60

Query: 926  FKPVSF----VDR---CYDN-------FKNSNRKNKEKLSMSSSYGDPPEIWQPPGEGIV 789
            FKPVS     VD+    +DN       F  +  K   + ++ +S+GDPPE+W   G+GIV
Sbjct: 61   FKPVSLRGELVDKGLEFFDNQRFSKVGFSTNESKKLSRDTILNSFGDPPEVWS--GDGIV 118

Query: 788  VRPG---VKFVQMXXXXXXXXXXXXXXXXXXXXXXXXXSYLGTQFPTPKQLCKGLDTFVI 618
            VR G      V+                          S LG  FPTPK++C+GLD FVI
Sbjct: 119  VRQGGSGSNLVRGGGGAGANGGAGSGFGSNSKDESWGGSNLGHNFPTPKEICRGLDKFVI 178

Query: 617  GQERAKKVLSVAVYNHYKRIYNDSSHKWPAGNDSSEKADGAENEIVELEKSNVLLMGPTG 438
            GQERAKKVLSVAVYNHYKRIY+ S  KWPA + S +KA+  +N+ VELEKSN+LLMGPTG
Sbjct: 179  GQERAKKVLSVAVYNHYKRIYHQSLQKWPAEDTSDDKAEATDNDSVELEKSNILLMGPTG 238

Query: 437  SGKTLLAKTLARLVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVAAAQQGIVY 258
            SGKTLLAKTLAR VNVPFVIADATTLTQA YVGEDVESILYKLL VADYNVAAAQQGIVY
Sbjct: 239  SGKTLLAKTLARFVNVPFVIADATTLTQARYVGEDVESILYKLLMVADYNVAAAQQGIVY 298

Query: 257  IDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKD 78
            IDEVDKITKKAESLN+SRDVSGEGVQQALLKMLEGT+VNVPEKGARKHPRGDNIQIDTKD
Sbjct: 299  IDEVDKITKKAESLNLSRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKD 358

Query: 77   ILFLCGGAFIDLEKTISERCQDSSI 3
            ILF+CGGAFIDLEKTISER QDSSI
Sbjct: 359  ILFICGGAFIDLEKTISERRQDSSI 383


>ref|NP_568792.1| CLP protease regulatory subunit X [Arabidopsis thaliana]
            gi|9759182|dbj|BAB09797.1| ATP-dependent Clp protease
            regulatory subunit CLPX [Arabidopsis thaliana]
            gi|14334860|gb|AAK59608.1| putative ATP-dependent Clp
            protease ATP-binding subunit ClpX1 [Arabidopsis thaliana]
            gi|23296603|gb|AAN13130.1| putative ATP-dependent Clp
            protease ATP-binding subunit ClpX1 [Arabidopsis thaliana]
            gi|332008960|gb|AED96343.1| CLP protease regulatory
            subunit X [Arabidopsis thaliana]
          Length = 579

 Score =  438 bits (1127), Expect = e-120
 Identities = 241/378 (63%), Positives = 274/378 (72%), Gaps = 19/378 (5%)
 Frame = -2

Query: 1079 MAAVLRSKSSKHTASIAITHFRYFIINDFHTS-CLPNFHLCNRTKWDNNSSLFKPVSFVD 903
            MAA LRS +S+ TAS+ ++HFRYFI N  HT+    +   CN     +    +K  S   
Sbjct: 1    MAAALRSNTSRETASLTLSHFRYFIFNRIHTARTATSPPHCNHRSKSDEKFPYKISSLGT 60

Query: 902  RCYDNFKNSNRKN-------KEKLS-------MSSSYGDPPEIWQPPGEGIVVRPGVKFV 765
               DN     R+N       ++KLS       + SS GDPP++WQPPG+G+ VR     V
Sbjct: 61   SFLDNRGGGERRNSTKCYAAQKKLSGVGSSVVILSSQGDPPDLWQPPGDGVSVRVNGSSV 120

Query: 764  QMXXXXXXXXXXXXXXXXXXXXXXXXXSY----LGTQFPTPKQLCKGLDTFVIGQERAKK 597
             +                          +    LG+ FPTPK++CKGL+ FVIGQERAKK
Sbjct: 121  NLGRGGGGGGSSPGGPGNGTGSNSKEDCWGGSNLGSDFPTPKEICKGLNKFVIGQERAKK 180

Query: 596  VLSVAVYNHYKRIYNDSSHKWPAGNDSSEKADGAENEIVELEKSNVLLMGPTGSGKTLLA 417
            VLSVAVYNHYKRIY++SS K  AG   S  A  A++++VELEKSN+LLMGPTGSGKTLLA
Sbjct: 181  VLSVAVYNHYKRIYHESSQKRSAGETDSTAAKPADDDMVELEKSNILLMGPTGSGKTLLA 240

Query: 416  KTLARLVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVAAAQQGIVYIDEVDKI 237
            KTLAR VNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVAAAQQGIVYIDEVDKI
Sbjct: 241  KTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVAAAQQGIVYIDEVDKI 300

Query: 236  TKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFLCGG 57
            TKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILF+CGG
Sbjct: 301  TKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGG 360

Query: 56   AFIDLEKTISERCQDSSI 3
            AF+D+EKTISER  DSSI
Sbjct: 361  AFVDIEKTISERRHDSSI 378


>ref|XP_002864237.1| hypothetical protein ARALYDRAFT_918413 [Arabidopsis lyrata subsp.
            lyrata] gi|297310072|gb|EFH40496.1| hypothetical protein
            ARALYDRAFT_918413 [Arabidopsis lyrata subsp. lyrata]
          Length = 572

 Score =  438 bits (1127), Expect = e-120
 Identities = 239/371 (64%), Positives = 269/371 (72%), Gaps = 12/371 (3%)
 Frame = -2

Query: 1079 MAAVLRSKSSKHTASIAITHFRYFIINDFHTSCLPNFHLCNRTKWDNNSSLFKPVSFVDR 900
            MAA LRS +S+ TAS+ ++ FRYF  N  HT+       CN      N       SF+D 
Sbjct: 1    MAAALRSNTSRETASLTLSQFRYFFFNRIHTARTATSPQCNHRSKSPNKISSLGTSFLDN 60

Query: 899  CYDNFKNS-NRKNKEKLS-------MSSSYGDPPEIWQPPGEGIVVRPGVKFVQMXXXXX 744
                 +NS N    +KL+       M SS GDPP++WQPPG+G+ VR     V +     
Sbjct: 61   RGGERRNSTNCYASQKLNGVGSSVVMLSSQGDPPDLWQPPGDGVSVRVNGSSVNLGRGGG 120

Query: 743  XXXXXXXXXXXXXXXXXXXXSY----LGTQFPTPKQLCKGLDTFVIGQERAKKVLSVAVY 576
                                 +    LG+ FPTPK++CKGL+ FVIGQERAKKVLSVAVY
Sbjct: 121  GGGSSPGGPGNGTGSNSKEDCWGGSNLGSDFPTPKEICKGLNKFVIGQERAKKVLSVAVY 180

Query: 575  NHYKRIYNDSSHKWPAGNDSSEKADGAENEIVELEKSNVLLMGPTGSGKTLLAKTLARLV 396
            NHYKRIY++SS K  AG   S     A++++VELEKSN+LLMGPTGSGKTLLAKTLAR V
Sbjct: 181  NHYKRIYHESSQKRSAGETDSTAVKPADDDMVELEKSNILLMGPTGSGKTLLAKTLARFV 240

Query: 395  NVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVAAAQQGIVYIDEVDKITKKAESL 216
            NVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVAAAQQGIVYIDEVDKITKKAESL
Sbjct: 241  NVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVAAAQQGIVYIDEVDKITKKAESL 300

Query: 215  NISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFLCGGAFIDLEK 36
            NISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILF+CGGAF+D+EK
Sbjct: 301  NISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEK 360

Query: 35   TISERCQDSSI 3
            TISER  DSSI
Sbjct: 361  TISERRHDSSI 371


>ref|XP_002516670.1| ATP-dependent clp protease ATP-binding subunit clpx, putative
            [Ricinus communis] gi|223544165|gb|EEF45689.1|
            ATP-dependent clp protease ATP-binding subunit clpx,
            putative [Ricinus communis]
          Length = 565

 Score =  438 bits (1127), Expect = e-120
 Identities = 242/377 (64%), Positives = 272/377 (72%), Gaps = 18/377 (4%)
 Frame = -2

Query: 1079 MAAVLRSKSSKHTASIAITHFRYFIINDFHTS----CLPNFHLCNRTKWDNNSS------ 930
            MAAV R+K SK TA      FRYFI N  H           +  +R KWD++ S      
Sbjct: 1    MAAVFRAKPSKETA---FYQFRYFIFNYMHAGGAIMSTSTSYCTHRNKWDDHFSNTPYHF 57

Query: 929  -LFKPVS----FVDR---CYDNFKNSNRKNKEKLSMSSSYGDPPEIWQPPGEGIVVRPGV 774
              FKPVS    F+++     DN +N + K K      S+YGDPPE+WQPPG+GI     V
Sbjct: 58   TSFKPVSLRGEFIEKGNQLLDNKRNWSEKLKNSSGGGSNYGDPPEVWQPPGDGIAT---V 114

Query: 773  KFVQMXXXXXXXXXXXXXXXXXXXXXXXXXSYLGTQFPTPKQLCKGLDTFVIGQERAKKV 594
            +  ++                           LG  FPTPK++C+GLD FVIGQ+RAKKV
Sbjct: 115  RVSEVRGGEGRGGPGSNSKDGCWGGSD-----LGNNFPTPKEICRGLDKFVIGQDRAKKV 169

Query: 593  LSVAVYNHYKRIYNDSSHKWPAGNDSSEKADGAENEIVELEKSNVLLMGPTGSGKTLLAK 414
            LSVAVYNHYKRIY+DS  KW AG+  + KA+  + + VELEKSN+LLMGPTGSGKTLLAK
Sbjct: 170  LSVAVYNHYKRIYHDSIQKWSAGDSGNNKAEAMDEDGVELEKSNILLMGPTGSGKTLLAK 229

Query: 413  TLARLVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVAAAQQGIVYIDEVDKIT 234
            TLAR VNVPFVIADATTLTQAGYVGEDVESILYKLL  ADYNVAAAQQGIVYIDEVDKIT
Sbjct: 230  TLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMAADYNVAAAQQGIVYIDEVDKIT 289

Query: 233  KKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFLCGGA 54
            KKAES+NISRDVSGEGVQQALLKMLEGT+VNVPEKGARKHPRGDNIQIDTKDILF+CGGA
Sbjct: 290  KKAESVNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGA 349

Query: 53   FIDLEKTISERCQDSSI 3
            FIDLEKTISER QDSSI
Sbjct: 350  FIDLEKTISERRQDSSI 366


>ref|XP_006441090.1| hypothetical protein CICLE_v10019480mg [Citrus clementina]
            gi|568880842|ref|XP_006493315.1| PREDICTED: ATP-dependent
            Clp protease ATP-binding subunit clpX-like,
            mitochondrial-like isoform X1 [Citrus sinensis]
            gi|557543352|gb|ESR54330.1| hypothetical protein
            CICLE_v10019480mg [Citrus clementina]
          Length = 575

 Score =  438 bits (1126), Expect = e-120
 Identities = 241/375 (64%), Positives = 279/375 (74%), Gaps = 17/375 (4%)
 Frame = -2

Query: 1076 AAVLRSK-SSKHTASIAITHFRYFIINDFHTSCLPNFHLC-NRTKWDNNS-------SLF 924
            AA LRSK ++  T S+ ++ FRY +++  H   + +   C +R+KWD++        + F
Sbjct: 5    AAALRSKPATVGTTSLTVSQFRYLMLSYMHAGRVASSSRCAHRSKWDDHVINTPYHFTSF 64

Query: 923  KPVSF----VDR----CYDNFKNSNRKNKEKLSMSSSYGDPPEIWQPPGEGIVVRPGVKF 768
            +PVS     V++    C DN K   +      S++SSYGDPPE+WQPPG+GI VR   + 
Sbjct: 65   RPVSLRGELVEKGSQLCTDNAK-CQKLTGGSSSITSSYGDPPEVWQPPGDGIAVRVNGQG 123

Query: 767  VQMXXXXXXXXXXXXXXXXXXXXXXXXXSYLGTQFPTPKQLCKGLDTFVIGQERAKKVLS 588
              +                           LG +FPTPK++CKGLD FVIGQERAKKVLS
Sbjct: 124  PNLVRGGGSGSGFGSGSKDGCWGGSN----LGNKFPTPKEICKGLDKFVIGQERAKKVLS 179

Query: 587  VAVYNHYKRIYNDSSHKWPAGNDSSEKADGAENEIVELEKSNVLLMGPTGSGKTLLAKTL 408
            VAVYNHY RIYN+SS K  AG  SS   DG +++ VELEKSN+LLMGPTGSGKTLLAKTL
Sbjct: 180  VAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTL 239

Query: 407  ARLVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVAAAQQGIVYIDEVDKITKK 228
            AR VNVPFVIADATTLTQAGYVGEDVESILYKLLTV+DYNVAAAQQGIVYIDEVDKITKK
Sbjct: 240  ARYVNVPFVIADATTLTQAGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKK 299

Query: 227  AESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFLCGGAFI 48
            AESLNISRDVSGEGVQQALLKMLEGT+VNVPEKGARKHPRGDNIQIDTKDILF+CGGAF+
Sbjct: 300  AESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFV 359

Query: 47   DLEKTISERCQDSSI 3
            D+EKTISER QDSSI
Sbjct: 360  DIEKTISERRQDSSI 374


>ref|XP_006441089.1| hypothetical protein CICLE_v10019480mg [Citrus clementina]
            gi|568880844|ref|XP_006493316.1| PREDICTED: ATP-dependent
            Clp protease ATP-binding subunit clpX-like,
            mitochondrial-like isoform X2 [Citrus sinensis]
            gi|557543351|gb|ESR54329.1| hypothetical protein
            CICLE_v10019480mg [Citrus clementina]
          Length = 573

 Score =  438 bits (1126), Expect = e-120
 Identities = 241/375 (64%), Positives = 279/375 (74%), Gaps = 17/375 (4%)
 Frame = -2

Query: 1076 AAVLRSK-SSKHTASIAITHFRYFIINDFHTSCLPNFHLC-NRTKWDNNS-------SLF 924
            AA LRSK ++  T S+ ++ FRY +++  H   + +   C +R+KWD++        + F
Sbjct: 5    AAALRSKPATVGTTSLTVSQFRYLMLSYMHAGRVASSSRCAHRSKWDDHVINTPYHFTSF 64

Query: 923  KPVSF----VDR----CYDNFKNSNRKNKEKLSMSSSYGDPPEIWQPPGEGIVVRPGVKF 768
            +PVS     V++    C DN K   +      S++SSYGDPPE+WQPPG+GI VR   + 
Sbjct: 65   RPVSLRGELVEKGSQLCTDNAK-CQKLTGGSSSITSSYGDPPEVWQPPGDGIAVRVNGQG 123

Query: 767  VQMXXXXXXXXXXXXXXXXXXXXXXXXXSYLGTQFPTPKQLCKGLDTFVIGQERAKKVLS 588
              +                           LG +FPTPK++CKGLD FVIGQERAKKVLS
Sbjct: 124  PNLVRGGGSGSGFGSGSKDGCWGGSN----LGNKFPTPKEICKGLDKFVIGQERAKKVLS 179

Query: 587  VAVYNHYKRIYNDSSHKWPAGNDSSEKADGAENEIVELEKSNVLLMGPTGSGKTLLAKTL 408
            VAVYNHY RIYN+SS K  AG  SS   DG +++ VELEKSN+LLMGPTGSGKTLLAKTL
Sbjct: 180  VAVYNHYMRIYNESSQKRSAGESSSCTTDGVDDDTVELEKSNILLMGPTGSGKTLLAKTL 239

Query: 407  ARLVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVAAAQQGIVYIDEVDKITKK 228
            AR VNVPFVIADATTLTQAGYVGEDVESILYKLLTV+DYNVAAAQQGIVYIDEVDKITKK
Sbjct: 240  ARYVNVPFVIADATTLTQAGYVGEDVESILYKLLTVSDYNVAAAQQGIVYIDEVDKITKK 299

Query: 227  AESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFLCGGAFI 48
            AESLNISRDVSGEGVQQALLKMLEGT+VNVPEKGARKHPRGDNIQIDTKDILF+CGGAF+
Sbjct: 300  AESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFV 359

Query: 47   DLEKTISERCQDSSI 3
            D+EKTISER QDSSI
Sbjct: 360  DIEKTISERRQDSSI 374


>gb|AAB88706.1| CLP protease regulatory subunit CLPX [Arabidopsis thaliana]
          Length = 579

 Score =  435 bits (1119), Expect = e-119
 Identities = 240/378 (63%), Positives = 273/378 (72%), Gaps = 19/378 (5%)
 Frame = -2

Query: 1079 MAAVLRSKSSKHTASIAITHFRYFIINDFHTS-CLPNFHLCNRTKWDNNSSLFKPVSFVD 903
            MAA LRS +S+ TAS+ ++HFRYFI N  HT+    +   CN     +    +K  S   
Sbjct: 1    MAAALRSNTSRETASLTLSHFRYFIFNRIHTARTATSPPHCNHRSKSDEKFPYKISSLGT 60

Query: 902  RCYDNFKNSNRKN-------KEKLS-------MSSSYGDPPEIWQPPGEGIVVRPGVKFV 765
               DN     R+N       ++KLS       + SS GDPP++WQPPG+G+ VR     V
Sbjct: 61   SFLDNRGGGERRNSTKCYAAQKKLSGVGSSVVILSSQGDPPDLWQPPGDGVSVRVNGSSV 120

Query: 764  QMXXXXXXXXXXXXXXXXXXXXXXXXXSY----LGTQFPTPKQLCKGLDTFVIGQERAKK 597
             +                          +    LG+ FPTPK++CKGL+ FVIGQERAKK
Sbjct: 121  NLGRGGGGGGSNPGGPGNGTGSNSKEDCWGGSNLGSDFPTPKEICKGLNKFVIGQERAKK 180

Query: 596  VLSVAVYNHYKRIYNDSSHKWPAGNDSSEKADGAENEIVELEKSNVLLMGPTGSGKTLLA 417
            VLSVAVYNHYKRIY++SS K  AG   S  A  A++++VELEKSN+LLMGPTGSGKTLLA
Sbjct: 181  VLSVAVYNHYKRIYHESSQKRSAGETDSTAAKPADDDMVELEKSNILLMGPTGSGKTLLA 240

Query: 416  KTLARLVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVAAAQQGIVYIDEVDKI 237
            KTLAR VNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVAAAQQGIVYIDEVDKI
Sbjct: 241  KTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVAAAQQGIVYIDEVDKI 300

Query: 236  TKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFLCGG 57
            TKKAESL ISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILF+CGG
Sbjct: 301  TKKAESLYISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGG 360

Query: 56   AFIDLEKTISERCQDSSI 3
            AF+D+EKTISER  DSSI
Sbjct: 361  AFVDIEKTISERRHDSSI 378


>ref|XP_006401716.1| hypothetical protein EUTSA_v10013106mg [Eutrema salsugineum]
            gi|557102806|gb|ESQ43169.1| hypothetical protein
            EUTSA_v10013106mg [Eutrema salsugineum]
          Length = 572

 Score =  434 bits (1115), Expect = e-119
 Identities = 237/371 (63%), Positives = 271/371 (73%), Gaps = 12/371 (3%)
 Frame = -2

Query: 1079 MAAVLRSKSSKHTASIAITHFRYFIINDFHTSCLPNFHLCNRTKWDNNSSLFKP------ 918
            MAA LRS +S+ TAS+ ++ FRYF+ N  HT+   +    +R K D+ S+ F        
Sbjct: 1    MAAALRSSTSRETASLTLSQFRYFVFNRVHTARTASPQCNHRNKIDDPSNKFPDRIASLR 60

Query: 917  ---VSFVDRCYDNFKNSN--RKNKEKLSMSSSYGDPPEIWQPPGEGIVVRPGVKFVQMXX 753
                SF+D   +   +S     N  K ++ SS GDPP++WQPPG+G+ VR     V +  
Sbjct: 61   PTGTSFMDNQGERRSSSKGYATNGVKSAVLSSQGDPPDLWQPPGDGVSVRVNGSSVNLGR 120

Query: 752  XXXXXXXXXXXXXXXXXXXXXXXSY-LGTQFPTPKQLCKGLDTFVIGQERAKKVLSVAVY 576
                                      LG+ FPTPK++CKGL+ FVIGQERAKKVLSVAVY
Sbjct: 121  GGGGSGAGAGNGTGSNSKDDCWGGSNLGSDFPTPKEICKGLNKFVIGQERAKKVLSVAVY 180

Query: 575  NHYKRIYNDSSHKWPAGNDSSEKADGAENEIVELEKSNVLLMGPTGSGKTLLAKTLARLV 396
            NHYKRIY +S  K   G   S  A  A++++VELEKSN+LLMGPTGSGKTLLAKTLAR V
Sbjct: 181  NHYKRIYYESLQKRSTGETDSTTAKPADDDMVELEKSNILLMGPTGSGKTLLAKTLARFV 240

Query: 395  NVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVAAAQQGIVYIDEVDKITKKAESL 216
            NVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVAAAQQGIVYIDEVDKITKKAESL
Sbjct: 241  NVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVAAAQQGIVYIDEVDKITKKAESL 300

Query: 215  NISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFLCGGAFIDLEK 36
            NISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILF+CGGAF+D+EK
Sbjct: 301  NISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEK 360

Query: 35   TISERCQDSSI 3
            TISER  DSSI
Sbjct: 361  TISERRHDSSI 371


>gb|EOY23554.1| CLP protease regulatory subunit X isoform 3 [Theobroma cacao]
            gi|508776299|gb|EOY23555.1| CLP protease regulatory
            subunit X isoform 3 [Theobroma cacao]
          Length = 426

 Score =  434 bits (1115), Expect = e-119
 Identities = 249/392 (63%), Positives = 278/392 (70%), Gaps = 34/392 (8%)
 Frame = -2

Query: 1076 AAVLRSKSSKHTASIAITHFRYFIINDFHTSCLPN--FHLCNRTKWDNNS-------SLF 924
            AA LRSK S  TAS+ ++ FR+F+ N  H   + +       RTKWD++        + F
Sbjct: 4    AAALRSKPSVETASLTVSQFRHFLSNYMHCGRMASSSHSTTYRTKWDDHFVNTPYHFTSF 63

Query: 923  KPVSFV-------DRCYDNFKNSNRKNK-------EKLSMS-----SSYGDPPEIWQPPG 801
            KPVS          +  D  +NS   NK       EKL+ S     SSYGDPPE+WQPPG
Sbjct: 64   KPVSLRGELVEKGSQLLDIRRNSRGLNKDFDRELREKLNYSNCTVLSSYGDPPEVWQPPG 123

Query: 800  EGIVVR-PGVKFVQ-----MXXXXXXXXXXXXXXXXXXXXXXXXXSYLGTQFPTPKQLCK 639
            +G+ +R  GV   +                               S LG  FPTPK +CK
Sbjct: 124  DGVAIRVSGVNLGRGGGGGAGGGGGASTGSGGGFGPGSKDGCWGGSNLGHNFPTPKDICK 183

Query: 638  GLDTFVIGQERAKKVLSVAVYNHYKRIYNDSSHKWPAGNDSSEKADGAENEIVELEKSNV 459
            GLD FVIGQERAKKVLSVAVYNHY RIY++S  K PAG+  S  AD  +++IVELEKSN+
Sbjct: 184  GLDKFVIGQERAKKVLSVAVYNHYMRIYHESLQKRPAGDSVSNIADVLDDDIVELEKSNI 243

Query: 458  LLMGPTGSGKTLLAKTLARLVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVAA 279
            LLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAGYVGEDVESILYKLL VADYNVAA
Sbjct: 244  LLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLVVADYNVAA 303

Query: 278  AQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDN 99
            AQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRG+N
Sbjct: 304  AQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGEN 363

Query: 98   IQIDTKDILFLCGGAFIDLEKTISERCQDSSI 3
            IQIDTKDILF+CGGAFID+EKTISER QDSSI
Sbjct: 364  IQIDTKDILFICGGAFIDIEKTISERRQDSSI 395


>gb|EOY23553.1| CLP protease regulatory subunit X isoform 2 [Theobroma cacao]
          Length = 526

 Score =  434 bits (1115), Expect = e-119
 Identities = 249/392 (63%), Positives = 278/392 (70%), Gaps = 34/392 (8%)
 Frame = -2

Query: 1076 AAVLRSKSSKHTASIAITHFRYFIINDFHTSCLPN--FHLCNRTKWDNNS-------SLF 924
            AA LRSK S  TAS+ ++ FR+F+ N  H   + +       RTKWD++        + F
Sbjct: 4    AAALRSKPSVETASLTVSQFRHFLSNYMHCGRMASSSHSTTYRTKWDDHFVNTPYHFTSF 63

Query: 923  KPVSFV-------DRCYDNFKNSNRKNK-------EKLSMS-----SSYGDPPEIWQPPG 801
            KPVS          +  D  +NS   NK       EKL+ S     SSYGDPPE+WQPPG
Sbjct: 64   KPVSLRGELVEKGSQLLDIRRNSRGLNKDFDRELREKLNYSNCTVLSSYGDPPEVWQPPG 123

Query: 800  EGIVVR-PGVKFVQ-----MXXXXXXXXXXXXXXXXXXXXXXXXXSYLGTQFPTPKQLCK 639
            +G+ +R  GV   +                               S LG  FPTPK +CK
Sbjct: 124  DGVAIRVSGVNLGRGGGGGAGGGGGASTGSGGGFGPGSKDGCWGGSNLGHNFPTPKDICK 183

Query: 638  GLDTFVIGQERAKKVLSVAVYNHYKRIYNDSSHKWPAGNDSSEKADGAENEIVELEKSNV 459
            GLD FVIGQERAKKVLSVAVYNHY RIY++S  K PAG+  S  AD  +++IVELEKSN+
Sbjct: 184  GLDKFVIGQERAKKVLSVAVYNHYMRIYHESLQKRPAGDSVSNIADVLDDDIVELEKSNI 243

Query: 458  LLMGPTGSGKTLLAKTLARLVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVAA 279
            LLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAGYVGEDVESILYKLL VADYNVAA
Sbjct: 244  LLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLVVADYNVAA 303

Query: 278  AQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDN 99
            AQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRG+N
Sbjct: 304  AQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGEN 363

Query: 98   IQIDTKDILFLCGGAFIDLEKTISERCQDSSI 3
            IQIDTKDILF+CGGAFID+EKTISER QDSSI
Sbjct: 364  IQIDTKDILFICGGAFIDIEKTISERRQDSSI 395


>gb|EOY23552.1| CLP protease regulatory subunit X isoform 1 [Theobroma cacao]
          Length = 594

 Score =  434 bits (1115), Expect = e-119
 Identities = 249/392 (63%), Positives = 278/392 (70%), Gaps = 34/392 (8%)
 Frame = -2

Query: 1076 AAVLRSKSSKHTASIAITHFRYFIINDFHTSCLPN--FHLCNRTKWDNNS-------SLF 924
            AA LRSK S  TAS+ ++ FR+F+ N  H   + +       RTKWD++        + F
Sbjct: 4    AAALRSKPSVETASLTVSQFRHFLSNYMHCGRMASSSHSTTYRTKWDDHFVNTPYHFTSF 63

Query: 923  KPVSFV-------DRCYDNFKNSNRKNK-------EKLSMS-----SSYGDPPEIWQPPG 801
            KPVS          +  D  +NS   NK       EKL+ S     SSYGDPPE+WQPPG
Sbjct: 64   KPVSLRGELVEKGSQLLDIRRNSRGLNKDFDRELREKLNYSNCTVLSSYGDPPEVWQPPG 123

Query: 800  EGIVVR-PGVKFVQ-----MXXXXXXXXXXXXXXXXXXXXXXXXXSYLGTQFPTPKQLCK 639
            +G+ +R  GV   +                               S LG  FPTPK +CK
Sbjct: 124  DGVAIRVSGVNLGRGGGGGAGGGGGASTGSGGGFGPGSKDGCWGGSNLGHNFPTPKDICK 183

Query: 638  GLDTFVIGQERAKKVLSVAVYNHYKRIYNDSSHKWPAGNDSSEKADGAENEIVELEKSNV 459
            GLD FVIGQERAKKVLSVAVYNHY RIY++S  K PAG+  S  AD  +++IVELEKSN+
Sbjct: 184  GLDKFVIGQERAKKVLSVAVYNHYMRIYHESLQKRPAGDSVSNIADVLDDDIVELEKSNI 243

Query: 458  LLMGPTGSGKTLLAKTLARLVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVAA 279
            LLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAGYVGEDVESILYKLL VADYNVAA
Sbjct: 244  LLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLVVADYNVAA 303

Query: 278  AQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDN 99
            AQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRG+N
Sbjct: 304  AQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGEN 363

Query: 98   IQIDTKDILFLCGGAFIDLEKTISERCQDSSI 3
            IQIDTKDILF+CGGAFID+EKTISER QDSSI
Sbjct: 364  IQIDTKDILFICGGAFIDIEKTISERRQDSSI 395


>gb|EMJ20072.1| hypothetical protein PRUPE_ppa003261mg [Prunus persica]
          Length = 588

 Score =  432 bits (1112), Expect = e-118
 Identities = 247/389 (63%), Positives = 278/389 (71%), Gaps = 30/389 (7%)
 Frame = -2

Query: 1079 MAAVLRSKSSKHTASIAITHFRYFIINDFHTSCLPNFHLCNRTKWDN-------NSSLFK 921
            MAA LRSK S+ T S  ++ FRYF+ N  H   + N H  +RTK ++       + + FK
Sbjct: 1    MAAALRSKPSRDTVSSTVSQFRYFVFNYLHAGRVVNSHYAHRTKNEDLFMNTPYHFTSFK 60

Query: 920  PVS----FVDRCYDNF----------KNSNRKNKEKL------SMSSSYGDPPEIWQPPG 801
            PV+    FV++    F          KNS+R    KL      S+ SS GDPPE+W   G
Sbjct: 61   PVALGGNFVEKGSQIFDRPRVAQKTSKNSDRNWGRKLCSSRCNSVLSSQGDPPEVWS--G 118

Query: 800  EGIVVR--PGVKFVQ-MXXXXXXXXXXXXXXXXXXXXXXXXXSYLGTQFPTPKQLCKGLD 630
            +GIVVR  P    V+                           S LG  FPTPK++CKGLD
Sbjct: 119  DGIVVRAGPSSNLVRGSGGGGGPSPGSGGGFESNSKDECWGGSSLGNNFPTPKEICKGLD 178

Query: 629  TFVIGQERAKKVLSVAVYNHYKRIYNDSSHKWPAGNDSSEKADGAENEIVELEKSNVLLM 450
             FVIGQE+AKKVLSVAVYNHYKRIY++S  KW AG+  + K D  +++ VELEKSN+LLM
Sbjct: 179  KFVIGQEQAKKVLSVAVYNHYKRIYHESLQKWSAGDSGNSKVDAMDDDRVELEKSNILLM 238

Query: 449  GPTGSGKTLLAKTLARLVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVAAAQQ 270
            GPTGSGKTLLAKTLAR VNVPFVIADATTLTQ  YVGEDVESILYKLLTVADYNVAAAQQ
Sbjct: 239  GPTGSGKTLLAKTLARFVNVPFVIADATTLTQERYVGEDVESILYKLLTVADYNVAAAQQ 298

Query: 269  GIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQI 90
            GIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRG+NIQI
Sbjct: 299  GIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQI 358

Query: 89   DTKDILFLCGGAFIDLEKTISERCQDSSI 3
            DTKDILF+CGGAFIDLEKTISER QDSSI
Sbjct: 359  DTKDILFICGGAFIDLEKTISERRQDSSI 387


>ref|XP_006280226.1| hypothetical protein CARUB_v10026143mg [Capsella rubella]
            gi|482548930|gb|EOA13124.1| hypothetical protein
            CARUB_v10026143mg [Capsella rubella]
          Length = 581

 Score =  432 bits (1111), Expect = e-118
 Identities = 239/380 (62%), Positives = 271/380 (71%), Gaps = 21/380 (5%)
 Frame = -2

Query: 1079 MAAVLRSKSSKHTASIAITHFRYFIINDFHTSCLPNFHLCNRT--KWDNNSSLFKP---- 918
            MAA LRS +S+ TAS+ ++ FRYF  N  HT+       CN    K D+ S+   P    
Sbjct: 1    MAAALRSNTSRETASLTLSQFRYFFFNRIHTARTATSPHCNHRSKKADDPSNNKSPGKIS 60

Query: 917  ---VSFVDRCYDNFKNSNRKNKEKLSMS----------SSYGDPPEIWQPPGEGIVVRPG 777
                SF+D      +NS+R      +            SS GDPP++WQPPG+G+ VR  
Sbjct: 61   SLGTSFLDHRGGERRNSSRGYATNCAQKVNGVGSSVILSSQGDPPDLWQPPGDGVSVRVN 120

Query: 776  VKFVQMXXXXXXXXXXXXXXXXXXXXXXXXXS--YLGTQFPTPKQLCKGLDTFVIGQERA 603
               V +                             LG+ FPTPK++CKGL+ FVIGQERA
Sbjct: 121  GSSVNLGRGGGGGSPGGPGNGAGSNSKEDSWGGSNLGSDFPTPKEICKGLNKFVIGQERA 180

Query: 602  KKVLSVAVYNHYKRIYNDSSHKWPAGNDSSEKADGAENEIVELEKSNVLLMGPTGSGKTL 423
            KKVLSVAVYNHYKRIY++SS K  +G   S  A  A++++VELEKSN+LLMGPTGSGKTL
Sbjct: 181  KKVLSVAVYNHYKRIYHESSQKRSSGETESTAAKPADDDMVELEKSNILLMGPTGSGKTL 240

Query: 422  LAKTLARLVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVAAAQQGIVYIDEVD 243
            LAKTLAR VNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVAAAQQGIVYIDEVD
Sbjct: 241  LAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVAAAQQGIVYIDEVD 300

Query: 242  KITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFLC 63
            KITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILF+C
Sbjct: 301  KITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFIC 360

Query: 62   GGAFIDLEKTISERCQDSSI 3
            GGAF+D+EKTISER  DSSI
Sbjct: 361  GGAFVDIEKTISERRHDSSI 380


>ref|XP_003634146.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
            isoform 2 [Vitis vinifera]
          Length = 577

 Score =  429 bits (1104), Expect = e-117
 Identities = 242/385 (62%), Positives = 276/385 (71%), Gaps = 26/385 (6%)
 Frame = -2

Query: 1079 MAAVLRSKSSKHTASIAITHFRYFIINDFHTSCLPNFHLCNRTKWDN---------NSSL 927
            MAA LRSKSS+ TA +  + FRYFI+N  H   LPN ++ ++   D+         + + 
Sbjct: 1    MAAALRSKSSRETALLTFSQFRYFILNHMHAGRLPNSYISHKPNCDHCFTHSHTPYHFTS 60

Query: 926  FKPVSF----VDR---CYDN-------FKNSNRKNKEKLSMSSSYGDPPEIWQPPGEGIV 789
            FKPVS     VD+    +DN       F  +  K   + ++ +S+GDPPE+W   G+GIV
Sbjct: 61   FKPVSLRGELVDKGLEFFDNQRFSKVGFSTNESKKLSRDTILNSFGDPPEVWS--GDGIV 118

Query: 788  VRPG---VKFVQMXXXXXXXXXXXXXXXXXXXXXXXXXSYLGTQFPTPKQLCKGLDTFVI 618
            VR G      V+                          S LG  FPTPK++C+GLD FVI
Sbjct: 119  VRQGGSGSNLVRGGGGAGANGGAGSGFGSNSKDESWGGSNLGHNFPTPKEICRGLDKFVI 178

Query: 617  GQERAKKVLSVAVYNHYKRIYNDSSHKWPAGNDSSEKADGAENEIVELEKSNVLLMGPTG 438
            GQERAKKVLSVAVYNHYKRIY+ S  K        +KA+  +N+ VELEKSN+LLMGPTG
Sbjct: 179  GQERAKKVLSVAVYNHYKRIYHQSLQK------CDDKAEATDNDSVELEKSNILLMGPTG 232

Query: 437  SGKTLLAKTLARLVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVAAAQQGIVY 258
            SGKTLLAKTLAR VNVPFVIADATTLTQAGYVGEDVESILYKLL VADYNVAAAQQGIVY
Sbjct: 233  SGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMVADYNVAAAQQGIVY 292

Query: 257  IDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKD 78
            IDEVDKITKKAESLN+SRDVSGEGVQQALLKMLEGT+VNVPEKGARKHPRGDNIQIDTKD
Sbjct: 293  IDEVDKITKKAESLNLSRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKD 352

Query: 77   ILFLCGGAFIDLEKTISERCQDSSI 3
            ILF+CGGAFIDLEKTISER QDSSI
Sbjct: 353  ILFICGGAFIDLEKTISERRQDSSI 377


>ref|XP_004307989.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
            [Fragaria vesca subsp. vesca]
          Length = 572

 Score =  426 bits (1095), Expect = e-116
 Identities = 246/377 (65%), Positives = 274/377 (72%), Gaps = 19/377 (5%)
 Frame = -2

Query: 1076 AAVLRSKSSKHTASIAITHFRYFIINDFHTSCLPNFHLCNRTKWDN-------NSSLFKP 918
            AA LRSK S+ TAS     FRYF +N  HT  + N H   RTK D+       + + F+P
Sbjct: 3    AAALRSKPSRETAS----QFRYFFLNYMHTGRVANSHCVYRTKSDDLFVNTPYHFTAFRP 58

Query: 917  VSFVDRCYDNFKNS-NRKNKEKLSMS---SSYGDPPEIWQPPGEGIVVRPG-----VKFV 765
            VS      D+     +R   ++L+ S   ++YGDPPE+W   G+GIVVR G     VK  
Sbjct: 59   VSLSGNLKDSRSGGGDRSWGQRLNGSGVVATYGDPPEVWS--GDGIVVRGGPGSDVVKGG 116

Query: 764  QMXXXXXXXXXXXXXXXXXXXXXXXXXSYLGTQFPTPKQLCKGLDTFVIGQERAKKVLSV 585
                                       S LG  FPTPK++CKGLD FVIGQERAKKVLSV
Sbjct: 117  GGGGGGAAGGGGGGGFDSNGKDGCWGGSNLGGSFPTPKEICKGLDKFVIGQERAKKVLSV 176

Query: 584  AVYNHYKRIYNDSSHKWPAGNDSSEKADGAENEIVELEKSNVLLMGPTGSGKTLLAKTLA 405
            AVYNHYKRIY++S  KW AG DS  KAD   ++ VELEKSN+L+MGPTGSGKTLLAKTLA
Sbjct: 177  AVYNHYKRIYHESQQKWSAG-DSGNKADAMNDDRVELEKSNILVMGPTGSGKTLLAKTLA 235

Query: 404  RLVNVPFVIADATTLTQ---AGYVGEDVESILYKLLTVADYNVAAAQQGIVYIDEVDKIT 234
            R VNVPFVIADATTLTQ   AGYVGEDVESILYKLL+VADYNVAAAQQGIVYIDEVDKIT
Sbjct: 236  RFVNVPFVIADATTLTQESFAGYVGEDVESILYKLLSVADYNVAAAQQGIVYIDEVDKIT 295

Query: 233  KKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFLCGGA 54
            KKAESLNISRDVSGEGVQQALLKMLEGT+VNVPEKGARKHPRG+NIQIDTKDILF+CGGA
Sbjct: 296  KKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGENIQIDTKDILFICGGA 355

Query: 53   FIDLEKTISERCQDSSI 3
            FIDLEKTISER QDSSI
Sbjct: 356  FIDLEKTISERRQDSSI 372


>ref|XP_002321405.2| hypothetical protein POPTR_0015s01520g [Populus trichocarpa]
            gi|550321740|gb|EEF05532.2| hypothetical protein
            POPTR_0015s01520g [Populus trichocarpa]
          Length = 572

 Score =  411 bits (1056), Expect = e-112
 Identities = 236/381 (61%), Positives = 271/381 (71%), Gaps = 24/381 (6%)
 Frame = -2

Query: 1073 AVLRSKSSKHTASIAITHFRYFIINDFHT-SCLPNFHLCNR--TKWDNNSSL------FK 921
            A +R K +K TAS     FRYF+ N  H  S L + H  N+  T+ D+ ++       FK
Sbjct: 4    AAVRCKPTKVTAS----QFRYFMFNYMHVGSRLSSSHCANKIATRDDHFANTPYHFTSFK 59

Query: 920  PVS----FVDRCYDNFKN-------SNRKNKEKLSMSS----SYGDPPEIWQPPGEGIVV 786
            PVS    FV++     +N       S+R  +E +S +S    +YGDPPE+WQPPG+G+  
Sbjct: 60   PVSLRGEFVEKSTQLLENMRSSSSSSDRNWRETVSSNSGGGSNYGDPPEVWQPPGDGVAK 119

Query: 785  RPGVKFVQMXXXXXXXXXXXXXXXXXXXXXXXXXSYLGTQFPTPKQLCKGLDTFVIGQER 606
                                              S LG+ FPTPK++CK LD FVIGQ R
Sbjct: 120  -------MRVSDGGGDFKVWSRGGSGSKDGYWGGSNLGSSFPTPKEICKALDNFVIGQRR 172

Query: 605  AKKVLSVAVYNHYKRIYNDSSHKWPAGNDSSEKADGAENEIVELEKSNVLLMGPTGSGKT 426
            AKKVLSVAVYNHYKRIY +S  KW   +  +EK+D  +++ VELEKSN+LLMGPTGSGKT
Sbjct: 173  AKKVLSVAVYNHYKRIYLESVKKWSNTDSGNEKSDIMDDDGVELEKSNILLMGPTGSGKT 232

Query: 425  LLAKTLARLVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVAAAQQGIVYIDEV 246
            LLAKTLAR VNVPFVIADATTLTQA YVGEDVESILYKLLT ADYNVAAAQQGI+YIDE+
Sbjct: 233  LLAKTLARFVNVPFVIADATTLTQARYVGEDVESILYKLLTAADYNVAAAQQGIIYIDEI 292

Query: 245  DKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFL 66
            DKITKKAES+NISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILF+
Sbjct: 293  DKITKKAESVNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFI 352

Query: 65   CGGAFIDLEKTISERCQDSSI 3
            CGGAFIDLEKTISER QDSSI
Sbjct: 353  CGGAFIDLEKTISERRQDSSI 373


>ref|XP_004502651.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
            isoform X1 [Cicer arietinum]
          Length = 576

 Score =  411 bits (1056), Expect = e-112
 Identities = 242/381 (63%), Positives = 270/381 (70%), Gaps = 23/381 (6%)
 Frame = -2

Query: 1076 AAVLRSKSS--KHTASIAITHFRYFIINDFHTSCLPNFHLCNRTKWDNNS---SLFKPVS 912
            AA  RSK S  K  A++A++  RYF  N  H     N H  +RT   N     + FKP+S
Sbjct: 4    AAAFRSKPSNYKEKATLALSQLRYFAFNYTHAG---NSHYPSRTPLINTPYHFTSFKPLS 60

Query: 911  ----FVDRCYDNFK----NSNRKNKEKLSMS------SSYGDPPEIWQPPGEGIVVRPG- 777
                F      N      N N  N      +      SS+GDPPE+W   G GIVVRPG 
Sbjct: 61   LRGDFTQTHNGNSTTTTPNPNPNNHLPYDTTAYRVLVSSFGDPPEVWS--GGGIVVRPGN 118

Query: 776  VKFVQMXXXXXXXXXXXXXXXXXXXXXXXXXSYLGTQFPTPKQLCKGLDTFVIGQERAKK 597
              +                            S LG  FPTPK++CKGLD +VIGQERAKK
Sbjct: 119  SNYDVSGGGGAGGASSGGGDSANSKDGCWGGSNLGGSFPTPKEICKGLDKYVIGQERAKK 178

Query: 596  VLSVAVYNHYKRIYNDSSHK--WPAGNDSSE-KADGAENEIVELEKSNVLLMGPTGSGKT 426
            VLSVAVYNHYKRI+++SS K  WPAG+ S++ KAD  +++ VELEKSN+LLMGPTGSGKT
Sbjct: 179  VLSVAVYNHYKRIFHESSPKSMWPAGDSSNDGKADDVDDDRVELEKSNILLMGPTGSGKT 238

Query: 425  LLAKTLARLVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVAAAQQGIVYIDEV 246
            LLAKTLAR VNVPFVIADATTLTQAGYVGEDVESILYKLL+ ADYNVAAAQQGIVYIDEV
Sbjct: 239  LLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLSAADYNVAAAQQGIVYIDEV 298

Query: 245  DKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFL 66
            DKITKKAESLNISRDVSGEGVQQALLKMLEGT+VNVPEKGARKHPRGDNIQIDTK+ILF+
Sbjct: 299  DKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKNILFI 358

Query: 65   CGGAFIDLEKTISERCQDSSI 3
            CGGAFIDLEKTISER QDSSI
Sbjct: 359  CGGAFIDLEKTISERRQDSSI 379