BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00002875
         (670 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006352104.1| PREDICTED: pre-mRNA-processing protein 40A-l...   108   2e-21
ref|XP_006352103.1| PREDICTED: pre-mRNA-processing protein 40A-l...   108   2e-21
ref|XP_004250825.1| PREDICTED: pre-mRNA-processing protein 40A-l...    94   1e-18
ref|XP_002510055.1| protein binding protein, putative [Ricinus c...    68   3e-09
gb|ESW32934.1| hypothetical protein PHAVU_001G029800g [Phaseolus...    67   5e-09
ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 hom...    67   5e-09
emb|CBI19367.3| unnamed protein product [Vitis vinifera]               67   5e-09
ref|XP_006595998.1| PREDICTED: pre-mRNA-processing protein 40A-l...    67   6e-09
ref|XP_006486888.1| PREDICTED: pre-mRNA-processing protein 40A-l...    65   2e-08
ref|XP_006422755.1| hypothetical protein CICLE_v100277411mg, par...    65   2e-08
ref|XP_004156902.1| PREDICTED: pre-mRNA-processing protein 40A-l...    44   3e-08
ref|XP_004150264.1| PREDICTED: pre-mRNA-processing protein 40A-l...    44   3e-08
ref|XP_006486884.1| PREDICTED: pre-mRNA-processing protein 40A-l...    64   5e-08
ref|XP_006422757.1| hypothetical protein CICLE_v10027732mg [Citr...    64   5e-08
ref|XP_006422756.1| hypothetical protein CICLE_v10027732mg [Citr...    64   5e-08
ref|XP_003549369.2| PREDICTED: pre-mRNA-processing protein 40A-l...    62   1e-07
gb|EOY15663.1| Pre-mRNA-processing protein 40A isoform 3 [Theobr...    62   1e-07
gb|EOY15661.1| Pre-mRNA-processing protein 40A isoform 1 [Theobr...    62   1e-07
ref|XP_002320019.2| FF domain-containing family protein [Populus...    62   2e-07
ref|XP_004169188.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-pro...    61   4e-07

>ref|XP_006352104.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X2 [Solanum
            tuberosum]
          Length = 1003

 Score =  108 bits (269), Expect = 2e-21
 Identities = 59/111 (53%), Positives = 69/111 (62%), Gaps = 2/111 (1%)
 Frame = +1

Query: 343  KAGKREKTRKDGTDSDKGETYSFEEIKRSGSDRDKKHRKRHMSSFDDDENEKEXXXXXXX 522
            K    ++ R+ G+D DK +  S +EIKRSGSDRDKKHRKRH  S DDDENEK+       
Sbjct: 889  KRDSDKEIRRSGSDRDKKD--SDKEIKRSGSDRDKKHRKRHRRSSDDDENEKDHSRSSYR 946

Query: 523  XXXXXKKSKQMDQHVWSSEANSEGQHKKQKXXXXXXXXXXGDYDEH--WEF 669
                 KK KQMDQH  S EANSEGQHKK+K          GDY++H  WEF
Sbjct: 947  RDSDYKKLKQMDQHSRSLEANSEGQHKKRKRDHRSDSHRDGDYEDHKDWEF 997



 Score = 96.7 bits (239), Expect = 6e-18
 Identities = 51/76 (67%), Positives = 52/76 (68%)
 Frame = +3

Query: 3   SDTNLKFVFXXXXXXXXXXXXXXXXXXXXXXDEFYELLHASKEITASSKWEDCKSLFGDR 182
           SDTNLK VF                      DEFYELLHASKEITASSKWEDCKSLFGDR
Sbjct: 742 SDTNLKLVFEELLERAREREEKEAKKRKRLADEFYELLHASKEITASSKWEDCKSLFGDR 801

Query: 183 IMGDKSLLLEIFYKFV 230
           IMGD+SLLLEIF KFV
Sbjct: 802 IMGDESLLLEIFDKFV 817


>ref|XP_006352103.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X1 [Solanum
            tuberosum]
          Length = 1003

 Score =  108 bits (269), Expect = 2e-21
 Identities = 59/111 (53%), Positives = 69/111 (62%), Gaps = 2/111 (1%)
 Frame = +1

Query: 343  KAGKREKTRKDGTDSDKGETYSFEEIKRSGSDRDKKHRKRHMSSFDDDENEKEXXXXXXX 522
            K    ++ R+ G+D DK +  S +EIKRSGSDRDKKHRKRH  S DDDENEK+       
Sbjct: 889  KRDSDKEIRRSGSDRDKKD--SDKEIKRSGSDRDKKHRKRHRRSSDDDENEKDHSRSSYR 946

Query: 523  XXXXXKKSKQMDQHVWSSEANSEGQHKKQKXXXXXXXXXXGDYDEH--WEF 669
                 KK KQMDQH  S EANSEGQHKK+K          GDY++H  WEF
Sbjct: 947  RDSDYKKLKQMDQHSRSLEANSEGQHKKRKRDHRSDSHRDGDYEDHKDWEF 997



 Score = 96.7 bits (239), Expect = 6e-18
 Identities = 51/76 (67%), Positives = 52/76 (68%)
 Frame = +3

Query: 3   SDTNLKFVFXXXXXXXXXXXXXXXXXXXXXXDEFYELLHASKEITASSKWEDCKSLFGDR 182
           SDTNLK VF                      DEFYELLHASKEITASSKWEDCKSLFGDR
Sbjct: 742 SDTNLKLVFEELLERAREREEKEAKKRKRLADEFYELLHASKEITASSKWEDCKSLFGDR 801

Query: 183 IMGDKSLLLEIFYKFV 230
           IMGD+SLLLEIF KFV
Sbjct: 802 IMGDESLLLEIFDKFV 817


>ref|XP_004250825.1| PREDICTED: pre-mRNA-processing protein 40A-like [Solanum
           lycopersicum]
          Length = 1044

 Score = 94.4 bits (233), Expect(2) = 1e-18
 Identities = 50/76 (65%), Positives = 51/76 (67%)
 Frame = +3

Query: 3   SDTNLKFVFXXXXXXXXXXXXXXXXXXXXXXDEFYELLHASKEITASSKWEDCKSLFGDR 182
           SDTNLK VF                      DEFYELLHASKEITASSKWEDCKSLFGDR
Sbjct: 741 SDTNLKLVFEELLERAREREEKEAKKRKRLADEFYELLHASKEITASSKWEDCKSLFGDR 800

Query: 183 IMGDKSLLLEIFYKFV 230
           I GD+SLLLEIF KFV
Sbjct: 801 ITGDESLLLEIFDKFV 816



 Score = 25.4 bits (54), Expect(2) = 1e-18
 Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 6/60 (10%)
 Frame = +1

Query: 340 IKAGKREKTRKDGTDSDKGETYSFEEIKRSGSDRDKKHR------KRHMSSFDDDENEKE 501
           +K   +EK RK   D  + E    +  K+    R  KHR      +R  S  D  +++KE
Sbjct: 819 LKEKAKEKDRKRQEDKARKEKERKDREKKKEKHRRDKHRGDKSRKERERSKRDSSDSDKE 878



 Score = 84.0 bits (206), Expect = 4e-14
 Identities = 49/107 (45%), Positives = 60/107 (56%), Gaps = 2/107 (1%)
 Frame = +1

Query: 352  KREKTRKDGTDSDKGETYSFEEIKRSGSDRDKKHRKRHMSSFDDDENEKEXXXXXXXXXX 531
            KR  + +D  DSDK       EIKRSGSDRD+KHRKRH  S DDD++EK+          
Sbjct: 938  KRPGSERDKKDSDK-------EIKRSGSDRDRKHRKRHRHSSDDDDSEKDHSRSSYRRGS 990

Query: 532  XXKKSKQMDQHVWSSEANSEGQHKKQKXXXXXXXXXXGDYDEH--WE 666
              KK KQMD H  S EA+SEG+ KK+K           D ++H  WE
Sbjct: 991  DYKKVKQMDLHRRSLEADSEGKRKKRKRDHRSDSHRESDDEDHKDWE 1037


>ref|XP_002510055.1| protein binding protein, putative [Ricinus communis]
            gi|223550756|gb|EEF52242.1| protein binding protein,
            putative [Ricinus communis]
          Length = 970

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 39/107 (36%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
 Frame = +1

Query: 355  REKTRKDGTDSDKGET---YSFEEIKRSGSDRDKKHRKRHMSSFDD---DENEKEXXXXX 516
            +E+ +KD TDS+  +T   Y  +E K+   D+D+KHRKRH S  D+   D++EKE     
Sbjct: 854  KERIKKDETDSENVDTTDSYGHKEDKKREKDKDRKHRKRHHSGTDEVSSDKDEKEESRKS 913

Query: 517  XXXXXXXKKSKQMDQHVWSSEANSEGQHKKQKXXXXXXXXXXGDYDE 657
                   KKS+   +H ++ E++SE +HKK K          GDYD+
Sbjct: 914  RKHSSDRKKSR---KHSYTPESDSENRHKKHKRDQRESSRKNGDYDD 957


>gb|ESW32934.1| hypothetical protein PHAVU_001G029800g [Phaseolus vulgaris]
          Length = 1000

 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 35/108 (32%), Positives = 57/108 (52%), Gaps = 3/108 (2%)
 Frame = +1

Query: 343  KAGKREKTRKDGTDSDKG---ETYSFEEIKRSGSDRDKKHRKRHMSSFDDDENEKEXXXX 513
            K   +E+ RKD TDSD     E + ++E K+   D+++KHRKRH SS DD ++EKE    
Sbjct: 881  KDKSKERHRKDETDSDNQDMTEVHGYKEEKKKEKDKERKHRKRHQSSLDDVDSEKEDKEE 940

Query: 514  XXXXXXXXKKSKQMDQHVWSSEANSEGQHKKQKXXXXXXXXXXGDYDE 657
                     + K+  +H  S E+++E +H++ K          G ++E
Sbjct: 941  SKKSRRHGSERKKSRKHANSPESDTENRHRRHKREHWDVSRKTGGHEE 988



 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 32/80 (40%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
 Frame = +3

Query: 3   SDTNLKFVFXXXXXXXXXXXXXXXXXXXXXXDEFYELLHASKEITASSKWEDCKSLFGD- 179
           SD NLK +F                      DEF  LL+  K+IT SSKWEDCKSLF + 
Sbjct: 759 SDINLKLIFEELLERAKEKEEKEAKKRQRLADEFTNLLYTFKDITTSSKWEDCKSLFEET 818

Query: 180 ---RIMGDKSLLLEIFYKFV 230
              R +GD+S   EIF +++
Sbjct: 819 QEYRSIGDESYSREIFEEYI 838


>ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 homolog B-like [Vitis
            vinifera]
          Length = 1020

 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 32/104 (30%), Positives = 57/104 (54%), Gaps = 3/104 (2%)
 Frame = +1

Query: 355  REKTRKDGTDSDKGE---TYSFEEIKRSGSDRDKKHRKRHMSSFDDDENEKEXXXXXXXX 525
            +E++RKD T+S+  +   +Y ++E K+   D+D+KHRKRH S+ DD  ++KE        
Sbjct: 904  KERSRKDETESENVDVTGSYGYKEDKKREKDKDRKHRKRHQSAVDDASSDKEEKEESKKS 963

Query: 526  XXXXKKSKQMDQHVWSSEANSEGQHKKQKXXXXXXXXXXGDYDE 657
                   K+  +H ++ E+++E +HK+ K          G Y+E
Sbjct: 964  RRHGSDRKKSRKHAYTPESDTESRHKRHKREHWDGSRRNGGYEE 1007


>emb|CBI19367.3| unnamed protein product [Vitis vinifera]
          Length = 1030

 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 32/104 (30%), Positives = 57/104 (54%), Gaps = 3/104 (2%)
 Frame = +1

Query: 355  REKTRKDGTDSDKGE---TYSFEEIKRSGSDRDKKHRKRHMSSFDDDENEKEXXXXXXXX 525
            +E++RKD T+S+  +   +Y ++E K+   D+D+KHRKRH S+ DD  ++KE        
Sbjct: 914  KERSRKDETESENVDVTGSYGYKEDKKREKDKDRKHRKRHQSAVDDASSDKEEKEESKKS 973

Query: 526  XXXXKKSKQMDQHVWSSEANSEGQHKKQKXXXXXXXXXXGDYDE 657
                   K+  +H ++ E+++E +HK+ K          G Y+E
Sbjct: 974  RRHGSDRKKSRKHAYTPESDTESRHKRHKREHWDGSRRNGGYEE 1017


>ref|XP_006595998.1| PREDICTED: pre-mRNA-processing protein 40A-like [Glycine max]
          Length = 997

 Score = 66.6 bits (161), Expect = 6e-09
 Identities = 33/108 (30%), Positives = 58/108 (53%), Gaps = 3/108 (2%)
 Frame = +1

Query: 343  KAGKREKTRKDGTDSDK---GETYSFEEIKRSGSDRDKKHRKRHMSSFDDDENEKEXXXX 513
            K   +E+ +KD TDSD     +++ ++E K+   D+++KHRKRH SS DD ++EKE    
Sbjct: 878  KDKSKERNKKDETDSDNQDMADSHGYKEEKKKEKDKERKHRKRHQSSIDDVDSEKEEKEE 937

Query: 514  XXXXXXXXKKSKQMDQHVWSSEANSEGQHKKQKXXXXXXXXXXGDYDE 657
                     + K+  +H  S E+++E +H++ K          G ++E
Sbjct: 938  SKKSRRHGSERKKSRKHANSPESDNENRHRRHKRDHWDGSRKTGGHEE 985


>ref|XP_006486888.1| PREDICTED: pre-mRNA-processing protein 40A-like [Citrus sinensis]
          Length = 1001

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
 Frame = +1

Query: 352  KREKTRKDGTDSDKGETYSFEEIKRSGSDRDKKHRKRHMSSFDD-DENEKEXXXXXXXXX 528
            K + ++KDG +SD  ++  +E  KRSG D DKKHRKRH S  D  DENEK+         
Sbjct: 893  KEDHSKKDGAESDHDDSAEYEN-KRSGKDSDKKHRKRHHSGQDSLDENEKD--RSKNSHR 949

Query: 529  XXXKKSKQMDQHVWSSEANSEGQHKKQKXXXXXXXXXXGDYDE 657
               KKS+   +H  + E+++E +HK+ K          GD++E
Sbjct: 950  SDRKKSR---RHASTPESDNESRHKRHKRDHRNGSRKNGDHEE 989


>ref|XP_006422755.1| hypothetical protein CICLE_v100277411mg, partial [Citrus
           clementina] gi|557524689|gb|ESR35995.1| hypothetical
           protein CICLE_v100277411mg, partial [Citrus clementina]
          Length = 137

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
 Frame = +1

Query: 352 KREKTRKDGTDSDKGETYSFEEIKRSGSDRDKKHRKRHMSSFDD-DENEKEXXXXXXXXX 528
           K + ++KDG +SD  ++  +E  KRSG D DKKHRKRH S  D  DENEK+         
Sbjct: 29  KEDHSKKDGAESDHDDSTEYEN-KRSGKDSDKKHRKRHHSGQDSLDENEKD--RSKNSHR 85

Query: 529 XXXKKSKQMDQHVWSSEANSEGQHKKQKXXXXXXXXXXGDYDE 657
              KKS+   +H  + E+++E +HK+ K          GD++E
Sbjct: 86  SDRKKSR---RHASTPESDNESRHKRHKRDHRNGSRKNGDHEE 125


>ref|XP_004156902.1| PREDICTED: pre-mRNA-processing protein 40A-like [Cucumis sativus]
          Length = 983

 Score = 43.9 bits (102), Expect(2) = 3e-08
 Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 6/111 (5%)
 Frame = +1

Query: 343  KAGKREKT---RKDGTDS---DKGETYSFEEIKRSGSDRDKKHRKRHMSSFDDDENEKEX 504
            K G+REK    +KDG D+   D  +T   +E +R   +R KK RKR  S  ++  +E E 
Sbjct: 861  KKGEREKEDHFKKDGVDNENVDVSDTLELKENRRLDKERSKKQRKRRYSD-EEYSDEDEA 919

Query: 505  XXXXXXXXXXXKKSKQMDQHVWSSEANSEGQHKKQKXXXXXXXXXXGDYDE 657
                       K  K+  +H  + E++ E +H++ K           D++E
Sbjct: 920  GHDRSKKSQSHKDRKKSRRHGSAHESDGESRHRRHKRDHRNGSYKNLDHEE 970



 Score = 40.4 bits (93), Expect(2) = 3e-08
 Identities = 26/79 (32%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
 Frame = +3

Query: 6   DTNLKFVFXXXXXXXXXXXXXXXXXXXXXXDEFYELLHASKEITASSKWEDCKSLFGD-- 179
           DTNLK VF                      D+F+ LL + KEI+  S WED KS F    
Sbjct: 747 DTNLKLVFDELLERAREKEEKEAKKRKRLGDDFFNLLCSFKEISVYSNWEDSKSSFEGSQ 806

Query: 180 --RIMGDKSLLLEIFYKFV 230
               + D+ L  EIF +++
Sbjct: 807 EYSAIEDEKLCKEIFEEYI 825


>ref|XP_004150264.1| PREDICTED: pre-mRNA-processing protein 40A-like [Cucumis sativus]
          Length = 796

 Score = 43.9 bits (102), Expect(2) = 3e-08
 Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 6/111 (5%)
 Frame = +1

Query: 343  KAGKREKT---RKDGTDS---DKGETYSFEEIKRSGSDRDKKHRKRHMSSFDDDENEKEX 504
            K G+REK    +KDG D+   D  +T   +E +R   +R KK RKR  S  ++  +E E 
Sbjct: 674  KKGEREKEDHFKKDGVDNENVDVSDTLELKENRRLDKERSKKQRKRRYSD-EEYSDEDEA 732

Query: 505  XXXXXXXXXXXKKSKQMDQHVWSSEANSEGQHKKQKXXXXXXXXXXGDYDE 657
                       K  K+  +H  + E++ E +H++ K           D++E
Sbjct: 733  GHDRSKKSQSHKDRKKSRRHGSAHESDGESRHRRHKRDHRNGSYKNLDHEE 783



 Score = 40.4 bits (93), Expect(2) = 3e-08
 Identities = 26/79 (32%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
 Frame = +3

Query: 6   DTNLKFVFXXXXXXXXXXXXXXXXXXXXXXDEFYELLHASKEITASSKWEDCKSLFGD-- 179
           DTNLK VF                      D+F+ LL + KEI+  S WED KS F    
Sbjct: 560 DTNLKLVFDELLERAREKEEREAKKRKRLGDDFFNLLCSFKEISVYSNWEDSKSSFEGSQ 619

Query: 180 --RIMGDKSLLLEIFYKFV 230
               + D+ L  EIF +++
Sbjct: 620 EYSAIEDEKLCKEIFEEYI 638


>ref|XP_006486884.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X1 [Citrus
            sinensis] gi|568867105|ref|XP_006486885.1| PREDICTED:
            pre-mRNA-processing protein 40A-like isoform X2 [Citrus
            sinensis] gi|568867107|ref|XP_006486886.1| PREDICTED:
            pre-mRNA-processing protein 40A-like isoform X3 [Citrus
            sinensis] gi|568867109|ref|XP_006486887.1| PREDICTED:
            pre-mRNA-processing protein 40A-like isoform X4 [Citrus
            sinensis]
          Length = 1029

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 35/103 (33%), Positives = 55/103 (53%), Gaps = 1/103 (0%)
 Frame = +1

Query: 352  KREKTRKDGTDSDKGETYSFEEIKRSGSDRDKKHRKRHMSSFDD-DENEKEXXXXXXXXX 528
            K + ++KDG DSD  ++    + KRSG D DKKHRKRH S+ D  DENEK+         
Sbjct: 920  KEDHSKKDGADSDHDDSAE-NDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHN 978

Query: 529  XXXKKSKQMDQHVWSSEANSEGQHKKQKXXXXXXXXXXGDYDE 657
               KK +++     + E+ +E +HK+ +          GD+++
Sbjct: 979  SDRKKPRRLAS---TPESENESRHKRHRRDNRNGSRKNGDHED 1018


>ref|XP_006422757.1| hypothetical protein CICLE_v10027732mg [Citrus clementina]
            gi|557524691|gb|ESR35997.1| hypothetical protein
            CICLE_v10027732mg [Citrus clementina]
          Length = 1029

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 35/103 (33%), Positives = 55/103 (53%), Gaps = 1/103 (0%)
 Frame = +1

Query: 352  KREKTRKDGTDSDKGETYSFEEIKRSGSDRDKKHRKRHMSSFDD-DENEKEXXXXXXXXX 528
            K + ++KDG DSD  ++    + KRSG D DKKHRKRH S+ D  DENEK+         
Sbjct: 920  KEDHSKKDGADSDHDDSAE-NDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHN 978

Query: 529  XXXKKSKQMDQHVWSSEANSEGQHKKQKXXXXXXXXXXGDYDE 657
               KK +++     + E+ +E +HK+ +          GD+++
Sbjct: 979  SDRKKPRRLAS---TPESENESRHKRHRRDNRNGSRKNGDHED 1018


>ref|XP_006422756.1| hypothetical protein CICLE_v10027732mg [Citrus clementina]
            gi|557524690|gb|ESR35996.1| hypothetical protein
            CICLE_v10027732mg [Citrus clementina]
          Length = 996

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 35/103 (33%), Positives = 55/103 (53%), Gaps = 1/103 (0%)
 Frame = +1

Query: 352  KREKTRKDGTDSDKGETYSFEEIKRSGSDRDKKHRKRHMSSFDD-DENEKEXXXXXXXXX 528
            K + ++KDG DSD  ++    + KRSG D DKKHRKRH S+ D  DENEK+         
Sbjct: 887  KEDHSKKDGADSDHDDSAE-NDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHN 945

Query: 529  XXXKKSKQMDQHVWSSEANSEGQHKKQKXXXXXXXXXXGDYDE 657
               KK +++     + E+ +E +HK+ +          GD+++
Sbjct: 946  SDRKKPRRLAS---TPESENESRHKRHRRDNRNGSRKNGDHED 985


>ref|XP_003549369.2| PREDICTED: pre-mRNA-processing protein 40A-like [Glycine max]
          Length = 1008

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
 Frame = +1

Query: 343  KAGKREKTRKDGTDSDKGET---YSFEEIKRSGSDRDKKHRKRHMSSFDDDENEKEXXXX 513
            K   +E+ RKD TDSD  +    + ++E K+   D+++KHRKRH SS DD ++EKE    
Sbjct: 889  KDKSKERHRKDETDSDNQDMTDGHGYKEEKKKEKDKERKHRKRHQSSIDDVDSEKEEKEE 948

Query: 514  XXXXXXXXKKSKQMDQHVWSSEANSEGQHKKQKXXXXXXXXXXGDYDE 657
                     + K+  +   S E+++E +H++ K          G ++E
Sbjct: 949  SKKSRRHGSERKKSRKQADSPESDNENRHRRHKREHWDGSRKTGGHEE 996


>gb|EOY15663.1| Pre-mRNA-processing protein 40A isoform 3 [Theobroma cacao]
          Length = 1041

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
 Frame = +1

Query: 355  REKTRKDGTDS---DKGETYSFEEIKRSGSDRDKKHRKRHMSSFDDDENEKEXXXXXXXX 525
            +E+T+KD TDS   D  +++  +E K+   ++D+KHRKRH S  DD  ++K+        
Sbjct: 925  KERTKKDETDSENLDISDSHGHKEDKKKEKEKDRKHRKRHQSGGDDGSSDKDDREESKKS 984

Query: 526  XXXXKKSKQMDQHVWSSEANSEGQHKKQKXXXXXXXXXXGDYDE 657
                   K+  +H  S E+++E +HKK K            Y+E
Sbjct: 985  RRHGSDRKKSRKHAHSPESDNESRHKKHKRDHRDGSRRNSGYEE 1028


>gb|EOY15661.1| Pre-mRNA-processing protein 40A isoform 1 [Theobroma cacao]
            gi|508723765|gb|EOY15662.1| Pre-mRNA-processing protein
            40A isoform 1 [Theobroma cacao]
          Length = 1032

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
 Frame = +1

Query: 355  REKTRKDGTDS---DKGETYSFEEIKRSGSDRDKKHRKRHMSSFDDDENEKEXXXXXXXX 525
            +E+T+KD TDS   D  +++  +E K+   ++D+KHRKRH S  DD  ++K+        
Sbjct: 916  KERTKKDETDSENLDISDSHGHKEDKKKEKEKDRKHRKRHQSGGDDGSSDKDDREESKKS 975

Query: 526  XXXXKKSKQMDQHVWSSEANSEGQHKKQKXXXXXXXXXXGDYDE 657
                   K+  +H  S E+++E +HKK K            Y+E
Sbjct: 976  RRHGSDRKKSRKHAHSPESDNESRHKKHKRDHRDGSRRNSGYEE 1019


>ref|XP_002320019.2| FF domain-containing family protein [Populus trichocarpa]
            gi|550323102|gb|EEE98334.2| FF domain-containing family
            protein [Populus trichocarpa]
          Length = 1019

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
 Frame = +1

Query: 352  KREKTRKDGTDSDKGETYSFEEIKRSGSDRDKKHRKRHMSSFDD---DENEKEXXXXXXX 522
            + +K   DG + D  + Y  ++ K+   D+D+KHRKRH S+ DD   D++EKE       
Sbjct: 895  RTKKNETDGENVDASDGYGHKDDKKREKDKDRKHRKRHQSAIDDVNSDKDEKEESKKSRK 954

Query: 523  XXXXXKKSKQMDQHVWSSEANSEGQHKKQKXXXXXXXXXXGDYDE 657
                 KKS+   +H ++ E++ E QHK+ K          G  +E
Sbjct: 955  HSSDRKKSR---KHTYTPESDGESQHKRHKRDHRDGSRRNGSNEE 996


>ref|XP_004169188.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-processing protein
           40A-like, partial [Cucumis sativus]
          Length = 803

 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
 Frame = +1

Query: 352 KREKTRKDGTDS---DKGETYSFEEIKRSGSDRDKKHRKRHMSSFDDDENEKEXXXXXXX 522
           ++ + +KD TDS   D  +T+ + E K+   D+D+KHRKRH S+ DD  ++K+       
Sbjct: 688 EKGRVKKDETDSENVDVSDTHVYREDKKRDKDKDRKHRKRHHSATDDGASDKDEREESKK 747

Query: 523 XXXXXKKSKQMDQHVWSSEANSEGQHKKQK 612
                   K+  +H +S E++SE +H++ K
Sbjct: 748 SRKHGSDRKKSRKHAYSPESDSENRHRRHK 777