BLASTX nr result
ID: Atropa21_contig00002844
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00002844
(1950 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004235420.1| PREDICTED: pentatricopeptide repeat-containi... 182 6e-89
ref|XP_006358268.1| PREDICTED: pentatricopeptide repeat-containi... 195 6e-68
ref|XP_002268526.2| PREDICTED: pentatricopeptide repeat-containi... 132 3e-65
gb|EOY22910.1| Tetratricopeptide repeat-like superfamily protein... 112 4e-65
ref|XP_002518061.1| pentatricopeptide repeat-containing protein,... 92 2e-51
emb|CBI24516.3| unnamed protein product [Vitis vinifera] 97 1e-48
gb|EPS58771.1| hypothetical protein M569_16043 [Genlisea aurea] 79 2e-39
ref|XP_002528027.1| pentatricopeptide repeat-containing protein,... 78 4e-39
ref|XP_006358209.1| PREDICTED: phytochrome B [Solanum tuberosum] 148 6e-35
ref|NP_001274786.1| phytochrome B [Solanum tuberosum] gi|8567950... 148 6e-35
sp|P34094.2|PHYB_SOLTU RecName: Full=Phytochrome B gi|2326872|em... 148 6e-35
ref|XP_006662144.1| PREDICTED: pentatricopeptide repeat-containi... 74 4e-34
ref|XP_004229009.1| PREDICTED: phytochrome B1-like [Solanum lyco... 144 7e-34
emb|CAA05296.1| phytochrome B1 [Solanum lycopersicum] 144 7e-34
emb|CAA05294.1| phytochrome B1 [Solanum lycopersicum] 144 7e-34
ref|XP_003571953.1| PREDICTED: pentatricopeptide repeat-containi... 77 3e-33
gb|AAL34928.1|AC079037_1 Putative PPR-repeat protein [Oryza sati... 82 4e-33
gb|EEC66478.1| hypothetical protein OsI_32564 [Oryza sativa Indi... 81 6e-33
gb|EAZ15116.1| hypothetical protein OsJ_30529 [Oryza sativa Japo... 81 7e-33
sp|P29130.2|PHYB_TOBAC RecName: Full=Phytochrome B gi|295346|gb|... 148 1e-32
>ref|XP_004235420.1| PREDICTED: pentatricopeptide repeat-containing protein At5g62370-like
[Solanum lycopersicum]
Length = 1081
Score = 182 bits (462), Expect(2) = 6e-89
Identities = 85/106 (80%), Positives = 94/106 (88%)
Frame = -1
Query: 1506 FQQNECAGLSSDNIVYNTLIRGLCKHGRLIDALSLSYTMLKKGLAPSKASYENLLSSLCA 1327
F + G DNIVYNTLIRGLCKHGRL+DALSLSYTMLKKGLAPSKASYE+LLSSLCA
Sbjct: 866 FNRMNAQGCPPDNIVYNTLIRGLCKHGRLMDALSLSYTMLKKGLAPSKASYESLLSSLCA 925
Query: 1326 NNWSVHALKICQDMLANEYIPCGHNLKLLICMLDEENKWPEARFMY 1189
+NW VHALKIC DMLAN+Y+PCGHNLKLLIC+L EENKW EARF++
Sbjct: 926 SNWRVHALKICHDMLANKYVPCGHNLKLLICILGEENKWHEARFIF 971
Score = 174 bits (442), Expect(2) = 6e-89
Identities = 89/108 (82%), Positives = 97/108 (89%)
Frame = -3
Query: 1948 MEKSEIERDLVTYITLVSGVSRNIRSLDGKWLVPQRQYEEYKEMLFCLLHQSAMLPKKKC 1769
ME+SE+ERDLVTYITLVSGVSRNIRS++ K LVPQR+YEE KEMLF LLHQSAMLPK+KC
Sbjct: 718 MERSEVERDLVTYITLVSGVSRNIRSVNEKGLVPQRRYEESKEMLFRLLHQSAMLPKEKC 777
Query: 1768 LKISVSSLEQIKFIALRLINKVKDTPLMPNLYLYNGIISGFCGQRGWK 1625
LKISV+S EQIKF+ALRLINKVK TPLMPNLYLYNGIISGFC K
Sbjct: 778 LKISVNSQEQIKFLALRLINKVKATPLMPNLYLYNGIISGFCWAESMK 825
Score = 102 bits (253), Expect = 8e-19
Identities = 48/56 (85%), Positives = 49/56 (87%)
Frame = -2
Query: 1643 WAERMEDAYKHLDTMQKEGFQPNQVTFTILIDGHFRSGEINRAVSLFNRMNAQDCP 1476
WAE M+DAYKHL TMQ EG PNQVTFTILIDGHFRSGEIN AVSLFNRMNAQ CP
Sbjct: 820 WAESMKDAYKHLHTMQNEGILPNQVTFTILIDGHFRSGEINCAVSLFNRMNAQGCP 875
Score = 42.0 bits (97), Expect(2) = 5e-06
Identities = 22/74 (29%), Positives = 37/74 (50%)
Frame = -1
Query: 1485 GLSSDNIVYNTLIRGLCKHGRLIDALSLSYTMLKKGLAPSKASYENLLSSLCANNWSVHA 1306
G+ D ++ T+I L ++GR I A L TML+ G+ PS +Y L++ L N
Sbjct: 617 GIYPDKTLFVTMINALSRNGRAIQAHELFVTMLEDGVQPSHNAYTALINGLVKKNMIEKG 676
Query: 1305 LKICQDMLANEYIP 1264
+ M+ ++P
Sbjct: 677 CVYLKQMIEEGFMP 690
Score = 37.4 bits (85), Expect(2) = 5e-06
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = -2
Query: 1628 EDAYKHLDTMQKEGFQPNQVTFTILIDGHFRSGEINRAVSLFNRM 1494
EDA ++ MQ +G PNQ TF I+++ + + G+I A+ + ++M
Sbjct: 534 EDAKLLVEVMQDQGQVPNQATFLIMVNEYCKQGDIQSALEVLDQM 578
>ref|XP_006358268.1| PREDICTED: pentatricopeptide repeat-containing protein At5g62370-like
[Solanum tuberosum]
Length = 1067
Score = 181 bits (458), Expect(2) = 6e-68
Identities = 92/102 (90%), Positives = 97/102 (95%)
Frame = -3
Query: 1948 MEKSEIERDLVTYITLVSGVSRNIRSLDGKWLVPQRQYEEYKEMLFCLLHQSAMLPKKKC 1769
ME+SEIERDLVTYITLVSGVSRNIRS+DGK LVPQR+YEE KEMLF LLHQSAMLPK+KC
Sbjct: 718 MERSEIERDLVTYITLVSGVSRNIRSVDGKGLVPQRRYEESKEMLFRLLHQSAMLPKEKC 777
Query: 1768 LKISVSSLEQIKFIALRLINKVKDTPLMPNLYLYNGIISGFC 1643
LKISVSS EQIKF+ALRLINKVK TPLMPNLYLYNGIISGFC
Sbjct: 778 LKISVSSQEQIKFLALRLINKVKATPLMPNLYLYNGIISGFC 819
Score = 106 bits (264), Expect(2) = 6e-68
Identities = 50/56 (89%), Positives = 50/56 (89%)
Frame = -2
Query: 1643 WAERMEDAYKHLDTMQKEGFQPNQVTFTILIDGHFRSGEINRAVSLFNRMNAQDCP 1476
WAE MEDAYKHL TMQ EG QPNQVTFTILIDGHFRSGEIN AVSLFNRMNAQ CP
Sbjct: 820 WAESMEDAYKHLHTMQNEGIQPNQVTFTILIDGHFRSGEINCAVSLFNRMNAQGCP 875
Score = 195 bits (495), Expect = 7e-47
Identities = 91/114 (79%), Positives = 101/114 (88%)
Frame = -1
Query: 1506 FQQNECAGLSSDNIVYNTLIRGLCKHGRLIDALSLSYTMLKKGLAPSKASYENLLSSLCA 1327
F + G DNIVYNTLIRGLC+HGRL+DALSLSYTMLKKGLAPSKASYE+LLSSLCA
Sbjct: 866 FNRMNAQGCPPDNIVYNTLIRGLCRHGRLVDALSLSYTMLKKGLAPSKASYESLLSSLCA 925
Query: 1326 NNWSVHALKICQDMLANEYIPCGHNLKLLICMLDEENKWPEARFMYELLLKKRR 1165
+NW VHALKIC DMLAN+Y+PCGHNLKLLIC+L EENKW EARFMY+LLLKK +
Sbjct: 926 SNWRVHALKICHDMLANKYVPCGHNLKLLICILGEENKWHEARFMYDLLLKKEK 979
Score = 79.3 bits (194), Expect = 5e-12
Identities = 44/57 (77%), Positives = 44/57 (77%)
Frame = -1
Query: 522 TGKEVLFSDERVGIHLSGNKESSE*YVLCTLIVGGHIFDRKSGAVSRGKCCL*EADV 352
T KEV SDERVGIHLS NKESS YVL LIVGG IFDRK AVSR KCCL EADV
Sbjct: 1011 TEKEVSISDERVGIHLSVNKESSGWYVLYKLIVGGLIFDRKPEAVSRDKCCLWEADV 1067
Score = 43.9 bits (102), Expect(2) = 2e-06
Identities = 23/75 (30%), Positives = 39/75 (52%)
Frame = -1
Query: 1488 AGLSSDNIVYNTLIRGLCKHGRLIDALSLSYTMLKKGLAPSKASYENLLSSLCANNWSVH 1309
AG+ D I++ T+I L ++G+ I A L TML+ G+ PS +Y L++ L N
Sbjct: 616 AGIYPDKILFVTMINALSRNGQAIQAHELFITMLEDGVQPSHYAYTALINGLVKKNMIEK 675
Query: 1308 ALKICQDMLANEYIP 1264
+ M+ ++P
Sbjct: 676 GCVYLKQMIEEGFMP 690
Score = 37.0 bits (84), Expect(2) = 2e-06
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = -2
Query: 1628 EDAYKHLDTMQKEGFQPNQVTFTILIDGHFRSGEINRAVSLFNRM 1494
EDA ++ MQ +G PNQ TF I+++ + + G+I A+ + ++M
Sbjct: 534 EDAKFLVEVMQDQGQVPNQATFLIMVNEYCKQGDIQSALEVLDQM 578
>ref|XP_002268526.2| PREDICTED: pentatricopeptide repeat-containing protein At5g62370-like
[Vitis vinifera]
Length = 1101
Score = 132 bits (332), Expect(3) = 3e-65
Identities = 58/115 (50%), Positives = 88/115 (76%)
Frame = -1
Query: 1506 FQQNECAGLSSDNIVYNTLIRGLCKHGRLIDALSLSYTMLKKGLAPSKASYENLLSSLCA 1327
F + GL+ D I YN LI+GLCK GRL+DALS+S+TM K+GL P+K+SYE LL LCA
Sbjct: 863 FNKMNADGLAPDGITYNALIKGLCKAGRLLDALSVSHTMHKRGLFPNKSSYEKLLKCLCA 922
Query: 1326 NNWSVHALKICQDMLANEYIPCGHNLKLLICMLDEENKWPEARFMYELLLKKRRF 1162
++ VHA KI ++ML+++Y+PC +N L+C+L EE++W EA +++++LK+R++
Sbjct: 923 SHLGVHAFKIFEEMLSHDYVPCWYNCNWLLCILCEEHRWHEAHIVFDVMLKQRKY 977
Score = 96.7 bits (239), Expect(3) = 3e-65
Identities = 48/102 (47%), Positives = 68/102 (66%)
Frame = -3
Query: 1948 MEKSEIERDLVTYITLVSGVSRNIRSLDGKWLVPQRQYEEYKEMLFCLLHQSAMLPKKKC 1769
M++++IE D++T I LVSGVSRNI + +W + +E+L LLHQS ++P++
Sbjct: 715 MDRNQIECDMITCIALVSGVSRNITPVRRRWYHVKSGSARVREILLHLLHQSFVIPRENN 774
Query: 1768 LKISVSSLEQIKFIALRLINKVKDTPLMPNLYLYNGIISGFC 1643
L S +IK+ AL L+ K+K + MPNLYLYNGIISGFC
Sbjct: 775 LSFPRGSPRKIKYFALNLMQKIKGSSFMPNLYLYNGIISGFC 816
Score = 70.1 bits (170), Expect(3) = 3e-65
Identities = 32/51 (62%), Positives = 39/51 (76%)
Frame = -2
Query: 1640 AERMEDAYKHLDTMQKEGFQPNQVTFTILIDGHFRSGEINRAVSLFNRMNA 1488
A ++DAY H + MQ EG PNQVTFTILI+GH R GEI+ A+ LFN+MNA
Sbjct: 818 ANMIQDAYNHFELMQTEGVCPNQVTFTILINGHTRFGEIDHAIGLFNKMNA 868
>gb|EOY22910.1| Tetratricopeptide repeat-like superfamily protein, putative isoform 1
[Theobroma cacao] gi|508775655|gb|EOY22911.1|
Tetratricopeptide repeat-like superfamily protein,
putative isoform 1 [Theobroma cacao]
gi|508775656|gb|EOY22912.1| Tetratricopeptide repeat-like
superfamily protein, putative isoform 1 [Theobroma cacao]
Length = 1003
Score = 112 bits (281), Expect(3) = 4e-65
Identities = 58/102 (56%), Positives = 75/102 (73%)
Frame = -3
Query: 1948 MEKSEIERDLVTYITLVSGVSRNIRSLDGKWLVPQRQYEEYKEMLFCLLHQSAMLPKKKC 1769
M++++IE DL+TYI LVSGV RNI S +W +R E +EMLF LLH +LP++K
Sbjct: 711 MDRNQIEHDLITYIALVSGVCRNITSRK-RWCSIKRSSERAREMLFRLLHYRCLLPREKK 769
Query: 1768 LKISVSSLEQIKFIALRLINKVKDTPLMPNLYLYNGIISGFC 1643
L++S SS E +K AL+L+ KVK+T MPNLYLYNGIISGFC
Sbjct: 770 LRVSDSSPEAMKCFALKLMQKVKETRFMPNLYLYNGIISGFC 811
Score = 101 bits (251), Expect(3) = 4e-65
Identities = 49/128 (38%), Positives = 84/128 (65%)
Frame = -1
Query: 1506 FQQNECAGLSSDNIVYNTLIRGLCKHGRLIDALSLSYTMLKKGLAPSKASYENLLSSLCA 1327
F + + D I YNTLI+GLC+ GRL++ALSL + M K+GL P KA+YENLL+ CA
Sbjct: 858 FNKMNADDCTPDKIAYNTLIKGLCQAGRLLEALSLLHAMHKRGLIPRKATYENLLAHFCA 917
Query: 1326 NNWSVHALKICQDMLANEYIPCGHNLKLLICMLDEENKWPEARFMYELLLKKRRFMMNTS 1147
+ + A KI ++MLA+ +P ++ L+C+L E+ K EA +++ ++++ ++ + ++
Sbjct: 918 SYLCIPAFKIFEEMLASNVVPRPYSYNWLLCILCEQKKLREAYIVFDTMIQRGKYPLKST 977
Query: 1146 *RLDMQSL 1123
RL ++L
Sbjct: 978 ERLLAETL 985
Score = 84.7 bits (208), Expect(3) = 4e-65
Identities = 35/55 (63%), Positives = 45/55 (81%)
Frame = -2
Query: 1643 WAERMEDAYKHLDTMQKEGFQPNQVTFTILIDGHFRSGEINRAVSLFNRMNAQDC 1479
WA+RM+DAY H + MQKEG +PNQVT TIL+ GH ++GEI+ A+ LFN+MNA DC
Sbjct: 812 WADRMQDAYDHFELMQKEGVRPNQVTLTILMGGHIKAGEIDHAIDLFNKMNADDC 866
Score = 47.8 bits (112), Expect(2) = 2e-07
Identities = 30/103 (29%), Positives = 50/103 (48%)
Frame = -1
Query: 1488 AGLSSDNIVYNTLIRGLCKHGRLIDALSLSYTMLKKGLAPSKASYENLLSSLCANNWSVH 1309
+G D IVY T+I G K+GRLI+A L M++ + P+ SY L+S L + +
Sbjct: 609 SGEDPDEIVYMTMINGYAKNGRLIEARQLFEKMIEDAIRPTSHSYTALISGLVKKDMTDK 668
Query: 1308 ALKICQDMLANEYIPCGHNLKLLICMLDEENKWPEARFMYELL 1180
ML + +P N+ L +++ + E F + L+
Sbjct: 669 GCMYLDRMLGDGLVP---NVVLYTSLINNFLRKGEFEFAFRLV 708
Score = 36.2 bits (82), Expect(2) = 2e-07
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = -2
Query: 1628 EDAYKHLDTMQKEGFQPNQVTFTILIDGHFRSGEINRAVSLFNRM 1494
EDA +D MQ G P+Q T+ I+++ H + G++ A + ++M
Sbjct: 527 EDAKSLVDLMQDRGIFPDQATYLIMVNEHCKHGDLASAFDILDQM 571
>ref|XP_002518061.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223542657|gb|EEF44194.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 403
Score = 92.4 bits (228), Expect(3) = 2e-51
Identities = 51/102 (50%), Positives = 62/102 (60%)
Frame = -3
Query: 1948 MEKSEIERDLVTYITLVSGVSRNIRSLDGKWLVPQRQYEEYKEMLFCLLHQSAMLPKKKC 1769
M++S IE DLV YI LV G RNI + K E +E L LL Q LPKK
Sbjct: 116 MDRSLIEIDLVMYIALVIGFCRNINGVKQKLCQVTGASERMRERLLQLLCQGNFLPKKNI 175
Query: 1768 LKISVSSLEQIKFIALRLINKVKDTPLMPNLYLYNGIISGFC 1643
L+ S +S E +KF A +L+ K+K T MPNLYLYNGII+GFC
Sbjct: 176 LRFSANSPEAMKFFAFKLMYKIKGTRFMPNLYLYNGIIAGFC 217
Score = 91.7 bits (226), Expect(3) = 2e-51
Identities = 43/100 (43%), Positives = 68/100 (68%)
Frame = -1
Query: 1479 SSDNIVYNTLIRGLCKHGRLIDALSLSYTMLKKGLAPSKASYENLLSSLCANNWSVHALK 1300
S D + Y+TL++GLCK R IDALSL +TM K+G P+KASYENL+ CA + S+ A K
Sbjct: 273 SPDKVTYSTLLKGLCKASREIDALSLFFTMHKRGFFPNKASYENLIRLFCARHLSIPAFK 332
Query: 1299 ICQDMLANEYIPCGHNLKLLICMLDEENKWPEARFMYELL 1180
+ ++MLA+ Y+P + + L+ +L EE + E+ + +++
Sbjct: 333 LFEEMLAHNYLPRQYTAEWLLHILHEEERLHESHIVLDMM 372
Score = 68.9 bits (167), Expect(3) = 2e-51
Identities = 31/52 (59%), Positives = 39/52 (75%)
Frame = -2
Query: 1643 WAERMEDAYKHLDTMQKEGFQPNQVTFTILIDGHFRSGEINRAVSLFNRMNA 1488
WA+R++DAY + MQ EG PN+VTFTILI H R+GEI+ A+ LFN MNA
Sbjct: 218 WADRIKDAYIQFEKMQSEGLCPNEVTFTILIGAHCRAGEIDHAIELFNLMNA 269
>emb|CBI24516.3| unnamed protein product [Vitis vinifera]
Length = 970
Score = 96.7 bits (239), Expect(3) = 1e-48
Identities = 48/102 (47%), Positives = 68/102 (66%)
Frame = -3
Query: 1948 MEKSEIERDLVTYITLVSGVSRNIRSLDGKWLVPQRQYEEYKEMLFCLLHQSAMLPKKKC 1769
M++++IE D++T I LVSGVSRNI + +W + +E+L LLHQS ++P++
Sbjct: 595 MDRNQIECDMITCIALVSGVSRNITPVRRRWYHVKSGSARVREILLHLLHQSFVIPRENN 654
Query: 1768 LKISVSSLEQIKFIALRLINKVKDTPLMPNLYLYNGIISGFC 1643
L S +IK+ AL L+ K+K + MPNLYLYNGIISGFC
Sbjct: 655 LSFPRGSPRKIKYFALNLMQKIKGSSFMPNLYLYNGIISGFC 696
Score = 77.0 bits (188), Expect(3) = 1e-48
Identities = 36/62 (58%), Positives = 47/62 (75%)
Frame = -1
Query: 1506 FQQNECAGLSSDNIVYNTLIRGLCKHGRLIDALSLSYTMLKKGLAPSKASYENLLSSLCA 1327
F + GL+ D I YN LI+GLCK GRL+DALS+S+TM K+GL P+K+SYE LL LCA
Sbjct: 743 FNKMNADGLAPDGITYNALIKGLCKAGRLLDALSVSHTMHKRGLFPNKSSYEKLLKCLCA 802
Query: 1326 NN 1321
++
Sbjct: 803 SH 804
Score = 70.1 bits (170), Expect(3) = 1e-48
Identities = 32/51 (62%), Positives = 39/51 (76%)
Frame = -2
Query: 1640 AERMEDAYKHLDTMQKEGFQPNQVTFTILIDGHFRSGEINRAVSLFNRMNA 1488
A ++DAY H + MQ EG PNQVTFTILI+GH R GEI+ A+ LFN+MNA
Sbjct: 698 ANMIQDAYNHFELMQTEGVCPNQVTFTILINGHTRFGEIDHAIGLFNKMNA 748
>gb|EPS58771.1| hypothetical protein M569_16043 [Genlisea aurea]
Length = 902
Score = 79.0 bits (193), Expect(3) = 2e-39
Identities = 37/96 (38%), Positives = 62/96 (64%)
Frame = -1
Query: 1503 QQNECAGLSSDNIVYNTLIRGLCKHGRLIDALSLSYTMLKKGLAPSKASYENLLSSLCAN 1324
+ N G++ D +++N L+ G + GRL+DA+S + M +G PS+++YE LL LCA
Sbjct: 805 EMNGVYGIAPDRVLFNKLVSGFSEVGRLLDAVSALHAMQMRGFRPSESAYEKLLFGLCAC 864
Query: 1323 NWSVHALKICQDMLANEYIPCGHNLKLLICMLDEEN 1216
+ + ALKI Q+M++++Y+P +NLK L M E +
Sbjct: 865 GFRIDALKIYQEMVSHDYVPSYNNLKRLSSMFLERS 900
Score = 75.1 bits (183), Expect(3) = 2e-39
Identities = 41/103 (39%), Positives = 67/103 (65%), Gaps = 1/103 (0%)
Frame = -3
Query: 1948 MEKSEIERDLVTYITLVSGVSRNIRSLDGKWLVPQRQYEEYKEMLFCLLHQSAMLPKKKC 1769
M++S IE DLVTY+ L SG+ RNIR GK P+ ++ +EMLF L +S+ +P +K
Sbjct: 656 MKRSRIETDLVTYVVLFSGIFRNIRGFTGK--PPRPRFAREREMLFRTLCKSSSVPYRKN 713
Query: 1768 LKISVSSLEQIKFIALRLINKVKD-TPLMPNLYLYNGIISGFC 1643
+K+ +SSL ++K A+ L+ +V + P +P+L L+ ++ FC
Sbjct: 714 VKLRISSLGEMKSFAVDLMKEVGEILPAVPDLRLHTAAVAVFC 756
Score = 58.2 bits (139), Expect(3) = 2e-39
Identities = 27/50 (54%), Positives = 33/50 (66%)
Frame = -2
Query: 1640 AERMEDAYKHLDTMQKEGFQPNQVTFTILIDGHFRSGEINRAVSLFNRMN 1491
+E+M DAY HLD M G PNQV FT ++ + R GE +RAVSL N MN
Sbjct: 758 SEKMGDAYGHLDRMLTAGVYPNQVAFTFFVEEYIRGGESDRAVSLLNEMN 807
>ref|XP_002528027.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223532557|gb|EEF34345.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 233
Score = 78.2 bits (191), Expect(3) = 4e-39
Identities = 42/89 (47%), Positives = 52/89 (58%)
Frame = -3
Query: 1909 ITLVSGVSRNIRSLDGKWLVPQRQYEEYKEMLFCLLHQSAMLPKKKCLKISVSSLEQIKF 1730
I LV G RNI + + R +E L LL Q LP+K L+ S +SLE KF
Sbjct: 5 IALVIGFCRNINGVKKRLCQVTRASARMRERLLQLLCQGTFLPRKSILRFSANSLEASKF 64
Query: 1729 IALRLINKVKDTPLMPNLYLYNGIISGFC 1643
AL+L+ K+K T MPNLYLYN II+GFC
Sbjct: 65 FALKLMYKIKGTRFMPNLYLYNSIIAGFC 93
Score = 67.0 bits (162), Expect(3) = 4e-39
Identities = 36/87 (41%), Positives = 52/87 (59%)
Frame = -1
Query: 1479 SSDNIVYNTLIRGLCKHGRLIDALSLSYTMLKKGLAPSKASYENLLSSLCANNWSVHALK 1300
S D + YNTL+R LCK R IDALSL + M ++G P+KASYENL L+
Sbjct: 149 SPDKVTYNTLLRSLCKASREIDALSLPFGMQQRGFFPNKASYENL-------------LQ 195
Query: 1299 ICQDMLANEYIPCGHNLKLLICMLDEE 1219
+ ++M A+ Y+P + + L+ +L EE
Sbjct: 196 LSEEMFAHNYLPRQYTTEWLLHILHEE 222
Score = 66.2 bits (160), Expect(3) = 4e-39
Identities = 30/51 (58%), Positives = 38/51 (74%)
Frame = -2
Query: 1643 WAERMEDAYKHLDTMQKEGFQPNQVTFTILIDGHFRSGEINRAVSLFNRMN 1491
WA+R++DAY + MQ EG PNQVTF ILI+ H R+GEI+ A+ LFN MN
Sbjct: 94 WADRIKDAYIQFEKMQIEGICPNQVTFIILIEAHCRAGEIDHAIELFNLMN 144
>ref|XP_006358209.1| PREDICTED: phytochrome B [Solanum tuberosum]
Length = 1130
Score = 148 bits (373), Expect(2) = 6e-35
Identities = 80/108 (74%), Positives = 90/108 (83%), Gaps = 1/108 (0%)
Frame = -2
Query: 563 ANPELQQALRVHRQQEKKCYSRMKELAYICQEIKNPLNDMCFAHSLLVATYLTENQEQYL 384
A+PELQQALRV RQQEKKCYS+MKELAYICQEIK+PLN + F +SLL AT LTENQ+QYL
Sbjct: 876 ASPELQQALRVQRQQEKKCYSQMKELAYICQEIKSPLNGIRFTNSLLEATNLTENQKQYL 935
Query: 383 EASAACERQMSKIIR-C*YGNIEDDSLTIEKEEFFLGV*QNAVVGHVI 243
E SAACERQMSKIIR NIED SLT+EKE+FFLG +AVV V+
Sbjct: 936 ETSAACERQMSKIIRDVDLENIEDGSLTLEKEDFFLGSVIDAVVSQVM 983
Score = 28.5 bits (62), Expect(2) = 6e-35
Identities = 11/21 (52%), Positives = 18/21 (85%)
Frame = -1
Query: 171 VQQILSEFLLDILLYASSPVG 109
+QQ+L++FLL+++ YA SP G
Sbjct: 1013 IQQVLADFLLNMVRYAPSPDG 1033
>ref|NP_001274786.1| phytochrome B [Solanum tuberosum] gi|85679505|gb|ABC72086.1|
phytochrome B [Solanum tuberosum]
Length = 1130
Score = 148 bits (373), Expect(2) = 6e-35
Identities = 80/108 (74%), Positives = 90/108 (83%), Gaps = 1/108 (0%)
Frame = -2
Query: 563 ANPELQQALRVHRQQEKKCYSRMKELAYICQEIKNPLNDMCFAHSLLVATYLTENQEQYL 384
A+PELQQALRV RQQEKKCYS+MKELAYICQEIK+PLN + F +SLL AT LTENQ+QYL
Sbjct: 876 ASPELQQALRVQRQQEKKCYSQMKELAYICQEIKSPLNGIRFTNSLLEATNLTENQKQYL 935
Query: 383 EASAACERQMSKIIR-C*YGNIEDDSLTIEKEEFFLGV*QNAVVGHVI 243
E SAACERQMSKIIR NIED SLT+EKE+FFLG +AVV V+
Sbjct: 936 ETSAACERQMSKIIRDVDLENIEDGSLTLEKEDFFLGSVIDAVVSQVM 983
Score = 28.5 bits (62), Expect(2) = 6e-35
Identities = 11/21 (52%), Positives = 18/21 (85%)
Frame = -1
Query: 171 VQQILSEFLLDILLYASSPVG 109
+QQ+L++FLL+++ YA SP G
Sbjct: 1013 IQQVLADFLLNMVRYAPSPDG 1033
>sp|P34094.2|PHYB_SOLTU RecName: Full=Phytochrome B gi|2326872|emb|CAA74908.1| phytochrome B
[Solanum tuberosum]
Length = 1130
Score = 148 bits (373), Expect(2) = 6e-35
Identities = 80/108 (74%), Positives = 90/108 (83%), Gaps = 1/108 (0%)
Frame = -2
Query: 563 ANPELQQALRVHRQQEKKCYSRMKELAYICQEIKNPLNDMCFAHSLLVATYLTENQEQYL 384
A+PELQQALRV RQQEKKCYS+MKELAYICQEIK+PLN + F +SLL AT LTENQ+QYL
Sbjct: 876 ASPELQQALRVQRQQEKKCYSQMKELAYICQEIKSPLNGIRFTNSLLEATNLTENQKQYL 935
Query: 383 EASAACERQMSKIIR-C*YGNIEDDSLTIEKEEFFLGV*QNAVVGHVI 243
E SAACERQMSKIIR NIED SLT+EKE+FFLG +AVV V+
Sbjct: 936 ETSAACERQMSKIIRDIDLENIEDGSLTLEKEDFFLGSVIDAVVSQVM 983
Score = 28.5 bits (62), Expect(2) = 6e-35
Identities = 11/21 (52%), Positives = 18/21 (85%)
Frame = -1
Query: 171 VQQILSEFLLDILLYASSPVG 109
+QQ+L++FLL+++ YA SP G
Sbjct: 1013 IQQVLADFLLNMVRYAPSPDG 1033
>ref|XP_006662144.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g62370-like, partial [Oryza brachyantha]
Length = 852
Score = 73.6 bits (179), Expect(3) = 4e-34
Identities = 38/109 (34%), Positives = 61/109 (55%)
Frame = -1
Query: 1485 GLSSDNIVYNTLIRGLCKHGRLIDALSLSYTMLKKGLAPSKASYENLLSSLCANNWSVHA 1306
G D+I YN+ I+GL GR +ALS M K+G PSKASY+ L+ L N
Sbjct: 710 GCIFDDITYNSFIKGLSLAGRTKEALSFLLMMQKRGFVPSKASYDKLIELLLTENEIDLV 769
Query: 1305 LKICQDMLANEYIPCGHNLKLLICMLDEENKWPEARFMYELLLKKRRFM 1159
+++ ++M Y P N L+ +L ++ +W EA ++ ++LKK R++
Sbjct: 770 IQLFENMFVQGYTPRYFNYTSLLLVLAKDGRWSEADKIFRMMLKKGRYL 818
Score = 61.2 bits (147), Expect(3) = 4e-34
Identities = 36/102 (35%), Positives = 63/102 (61%)
Frame = -3
Query: 1948 MEKSEIERDLVTYITLVSGVSRNIRSLDGKWLVPQRQYEEYKEMLFCLLHQSAMLPKKKC 1769
M KS +E DL+TY L++G+ RN+ D + +P ++ +E + MLF LL Q K K
Sbjct: 557 MMKSHVEPDLITYGALITGICRNVDRRDMRPSLP-KKLKEARYMLFRLLPQIIDTRKGKQ 615
Query: 1768 LKISVSSLEQIKFIALRLINKVKDTPLMPNLYLYNGIISGFC 1643
+S+ E+I+ A +I + ++ +MP+L++YNG+++G C
Sbjct: 616 KDKYISTEEKIQ-AAQSIIQDLTESGMMPDLHIYNGMLNGLC 656
Score = 59.7 bits (143), Expect(3) = 4e-34
Identities = 25/54 (46%), Positives = 37/54 (68%)
Frame = -2
Query: 1640 AERMEDAYKHLDTMQKEGFQPNQVTFTILIDGHFRSGEINRAVSLFNRMNAQDC 1479
A +M+DAY L M++ G PN VT+TIL++ +SG+ NRA+ LFN +N+ C
Sbjct: 658 ANKMDDAYNLLSAMEQAGVLPNHVTYTILMNNQIKSGDSNRAIQLFNSLNSNGC 711
>ref|XP_004229009.1| PREDICTED: phytochrome B1-like [Solanum lycopersicum]
gi|59798480|sp|Q9ZS62.1|PHYB1_SOLLC RecName:
Full=Phytochrome B1 gi|4038600|emb|CAA05293.1|
phytochrome B1 [Solanum lycopersicum]
Length = 1131
Score = 144 bits (364), Expect(2) = 7e-34
Identities = 78/108 (72%), Positives = 89/108 (82%), Gaps = 1/108 (0%)
Frame = -2
Query: 563 ANPELQQALRVHRQQEKKCYSRMKELAYICQEIKNPLNDMCFAHSLLVATYLTENQEQYL 384
A+PELQQALRV RQQEKKCYS+MKELAYICQE+K+PLN + F +SLL AT LTE Q+QYL
Sbjct: 877 ASPELQQALRVQRQQEKKCYSQMKELAYICQEVKSPLNGIRFTNSLLEATNLTEYQKQYL 936
Query: 383 EASAACERQMSKIIR-C*YGNIEDDSLTIEKEEFFLGV*QNAVVGHVI 243
E SAACERQMSKIIR NIED SLT+EKE+FFLG +AVV V+
Sbjct: 937 ETSAACERQMSKIIRDVDLENIEDGSLTLEKEDFFLGSVIDAVVSQVM 984
Score = 28.5 bits (62), Expect(2) = 7e-34
Identities = 11/21 (52%), Positives = 18/21 (85%)
Frame = -1
Query: 171 VQQILSEFLLDILLYASSPVG 109
+QQ+L++FLL+++ YA SP G
Sbjct: 1014 IQQVLADFLLNMVRYAPSPDG 1034
>emb|CAA05296.1| phytochrome B1 [Solanum lycopersicum]
Length = 493
Score = 144 bits (364), Expect(2) = 7e-34
Identities = 78/108 (72%), Positives = 89/108 (82%), Gaps = 1/108 (0%)
Frame = -2
Query: 563 ANPELQQALRVHRQQEKKCYSRMKELAYICQEIKNPLNDMCFAHSLLVATYLTENQEQYL 384
A+PELQQALRV RQQEKKCYS+MKELAYICQE+K+PLN + F +SLL AT LTE Q+QYL
Sbjct: 239 ASPELQQALRVQRQQEKKCYSQMKELAYICQEVKSPLNGIRFTNSLLEATNLTEYQKQYL 298
Query: 383 EASAACERQMSKIIR-C*YGNIEDDSLTIEKEEFFLGV*QNAVVGHVI 243
E SAACERQMSKIIR NIED SLT+EKE+FFLG +AVV V+
Sbjct: 299 ETSAACERQMSKIIRDVDLENIEDGSLTLEKEDFFLGSVIDAVVSQVM 346
Score = 28.5 bits (62), Expect(2) = 7e-34
Identities = 11/21 (52%), Positives = 18/21 (85%)
Frame = -1
Query: 171 VQQILSEFLLDILLYASSPVG 109
+QQ+L++FLL+++ YA SP G
Sbjct: 376 IQQVLADFLLNMVRYAPSPDG 396
>emb|CAA05294.1| phytochrome B1 [Solanum lycopersicum]
Length = 462
Score = 144 bits (364), Expect(2) = 7e-34
Identities = 78/108 (72%), Positives = 89/108 (82%), Gaps = 1/108 (0%)
Frame = -2
Query: 563 ANPELQQALRVHRQQEKKCYSRMKELAYICQEIKNPLNDMCFAHSLLVATYLTENQEQYL 384
A+PELQQALRV RQQEKKCYS+MKELAYICQE+K+PLN + F +SLL AT LTE Q+QYL
Sbjct: 208 ASPELQQALRVQRQQEKKCYSQMKELAYICQEVKSPLNGIRFTNSLLEATNLTEYQKQYL 267
Query: 383 EASAACERQMSKIIR-C*YGNIEDDSLTIEKEEFFLGV*QNAVVGHVI 243
E SAACERQMSKIIR NIED SLT+EKE+FFLG +AVV V+
Sbjct: 268 ETSAACERQMSKIIRDVDLENIEDGSLTLEKEDFFLGSVIDAVVSQVM 315
Score = 28.5 bits (62), Expect(2) = 7e-34
Identities = 11/21 (52%), Positives = 18/21 (85%)
Frame = -1
Query: 171 VQQILSEFLLDILLYASSPVG 109
+QQ+L++FLL+++ YA SP G
Sbjct: 345 IQQVLADFLLNMVRYAPSPDG 365
>ref|XP_003571953.1| PREDICTED: pentatricopeptide repeat-containing protein At5g62370-like
[Brachypodium distachyon]
Length = 926
Score = 76.6 bits (187), Expect(3) = 3e-33
Identities = 40/103 (38%), Positives = 61/103 (59%)
Frame = -1
Query: 1473 DNIVYNTLIRGLCKHGRLIDALSLSYTMLKKGLAPSKASYENLLSSLCANNWSVHALKIC 1294
D++VYNT I+GL R +ALS M K+G PSKA+Y+ ++ L A N + AL I
Sbjct: 788 DDVVYNTFIKGLSLARRTKEALSFFLMMQKRGFVPSKAAYDKIMEQLLAENSTDLALNIF 847
Query: 1293 QDMLANEYIPCGHNLKLLICMLDEENKWPEARFMYELLLKKRR 1165
DM + YIP N L+ +L ++N+W E ++ ++L+K R
Sbjct: 848 DDMFCHGYIPRYSNYSSLLLVLAKDNQWREVDRVFMMMLEKGR 890
Score = 58.9 bits (141), Expect(3) = 3e-33
Identities = 38/103 (36%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
Frame = -3
Query: 1948 MEKSEIERDLVTYITLVSGVSRNIRSLDGKWLVPQRQYEEYKEMLFCLLHQSAMLPKK-K 1772
M K+ +E DL+TY LV+G+ RNI D + + + +E + MLF LL Q + +K K
Sbjct: 630 MMKNHVEPDLITYGALVTGICRNIDRRDMRPSLAAK-LDEARYMLFRLLPQISFGTRKGK 688
Query: 1771 CLKISVSSLEQIKFIALRLINKVKDTPLMPNLYLYNGIISGFC 1643
K +SS E+I +A +I + ++ +MP+L++YNG+++G C
Sbjct: 689 QKKKRMSSEEKID-LAQNIIQDLVESGMMPDLHIYNGMLNGLC 730
Score = 55.8 bits (133), Expect(3) = 3e-33
Identities = 24/51 (47%), Positives = 36/51 (70%)
Frame = -2
Query: 1640 AERMEDAYKHLDTMQKEGFQPNQVTFTILIDGHFRSGEINRAVSLFNRMNA 1488
A++M+DAY L M++ G PN VT+TIL++ R G+ NRA+ LFN +N+
Sbjct: 732 AQKMDDAYNLLSLMEQSGVLPNHVTYTILMNNDIRLGDSNRAIQLFNSLNS 782
Score = 42.4 bits (98), Expect(2) = 2e-06
Identities = 29/105 (27%), Positives = 48/105 (45%)
Frame = -1
Query: 1485 GLSSDNIVYNTLIRGLCKHGRLIDALSLSYTMLKKGLAPSKASYENLLSSLCANNWSVHA 1306
GL VY+++I LC+ G +A M++ GL P + Y LL+ + A
Sbjct: 494 GLEPSIAVYDSIIACLCRLGHFKEAEFTLRQMIEAGLVPDEVIYTTLLNGYSTMRHTKAA 553
Query: 1305 LKICQDMLANEYIPCGHNLKLLICMLDEENKWPEARFMYELLLKK 1171
++ +ML P H LI L ++NK +A E +L++
Sbjct: 554 CRVFDEMLERGLQPGSHAYGALINGLVKDNKIRKALHYLERMLEE 598
Score = 38.5 bits (88), Expect(2) = 2e-06
Identities = 17/48 (35%), Positives = 31/48 (64%)
Frame = -2
Query: 1637 ERMEDAYKHLDTMQKEGFQPNQVTFTILIDGHFRSGEINRAVSLFNRM 1494
+RM+DA ++ MQ G +P+ T +I++ + + G+I A+SLF+ M
Sbjct: 443 KRMDDARTLINLMQSRGVRPDMSTNSIMVTAYCKIGDIESALSLFDEM 490
>gb|AAL34928.1|AC079037_1 Putative PPR-repeat protein [Oryza sativa] gi|31429883|gb|AAP51872.1|
hypothetical protein LOC_Os10g02650 [Oryza sativa
Japonica Group]
Length = 949
Score = 82.0 bits (201), Expect(3) = 4e-33
Identities = 44/111 (39%), Positives = 64/111 (57%)
Frame = -1
Query: 1485 GLSSDNIVYNTLIRGLCKHGRLIDALSLSYTMLKKGLAPSKASYENLLSSLCANNWSVHA 1306
G D I YNT I+GL GR+ +ALS M K+G PSKASY+ L+ L A N
Sbjct: 787 GCVFDKITYNTFIKGLSLAGRMKEALSFLLMMHKRGFVPSKASYDKLMELLLAENAIDIV 846
Query: 1305 LKICQDMLANEYIPCGHNLKLLICMLDEENKWPEARFMYELLLKKRRFMMN 1153
L++ +DML Y P N L+ +L ++ +W EA ++ ++LKKR+ +N
Sbjct: 847 LQLFEDMLFQGYTPRYANYTSLLLVLAKDGRWSEADRIFTMMLKKRKMFIN 897
Score = 58.5 bits (140), Expect(3) = 4e-33
Identities = 25/54 (46%), Positives = 35/54 (64%)
Frame = -2
Query: 1640 AERMEDAYKHLDTMQKEGFQPNQVTFTILIDGHFRSGEINRAVSLFNRMNAQDC 1479
A +M+DAY L M + G PN VT+TIL++ R G+IN A+ LFN +N+ C
Sbjct: 735 ANKMDDAYSLLSVMDQTGILPNHVTYTILMNNQIRLGDINHAIQLFNSLNSDGC 788
Score = 50.4 bits (119), Expect(3) = 4e-33
Identities = 32/102 (31%), Positives = 58/102 (56%)
Frame = -3
Query: 1948 MEKSEIERDLVTYITLVSGVSRNIRSLDGKWLVPQRQYEEYKEMLFCLLHQSAMLPKKKC 1769
M K+ + DL+TY LV+G+ RNI + G ++ +E + MLF +L Q K
Sbjct: 634 MMKTNVAPDLITYGALVTGICRNI-ARRGMRPSLAKKLKEARYMLFRMLPQIIDTRNGKQ 692
Query: 1768 LKISVSSLEQIKFIALRLINKVKDTPLMPNLYLYNGIISGFC 1643
+ + E I+ +A +I +++ ++P+L++YNG+I+G C
Sbjct: 693 KDNQICTEEMIQ-VAQGIIQDLEENGMVPDLHIYNGMINGLC 733
>gb|EEC66478.1| hypothetical protein OsI_32564 [Oryza sativa Indica Group]
Length = 481
Score = 81.3 bits (199), Expect(3) = 6e-33
Identities = 43/109 (39%), Positives = 64/109 (58%)
Frame = -1
Query: 1485 GLSSDNIVYNTLIRGLCKHGRLIDALSLSYTMLKKGLAPSKASYENLLSSLCANNWSVHA 1306
G D I YNT I+GL GR+ +ALS M K+G PSKASY+ L+ L A N
Sbjct: 339 GCVFDKITYNTFIKGLSLAGRMKEALSFLLMMHKRGFVPSKASYDKLMELLLAENAIDIV 398
Query: 1305 LKICQDMLANEYIPCGHNLKLLICMLDEENKWPEARFMYELLLKKRRFM 1159
L++ +DML Y P N L+ +L ++ +W EA ++ ++LKKR+++
Sbjct: 399 LQLFEDMLFQGYTPRYANYTSLLLVLAKDGRWSEADRIFTMMLKKRKYL 447
Score = 58.5 bits (140), Expect(3) = 6e-33
Identities = 25/54 (46%), Positives = 35/54 (64%)
Frame = -2
Query: 1640 AERMEDAYKHLDTMQKEGFQPNQVTFTILIDGHFRSGEINRAVSLFNRMNAQDC 1479
A +M+DAY L M + G PN VT+TIL++ R G+IN A+ LFN +N+ C
Sbjct: 287 ANKMDDAYSLLSVMDQTGILPNHVTYTILMNNQIRLGDINHAIQLFNSLNSDGC 340
Score = 50.8 bits (120), Expect(3) = 6e-33
Identities = 32/102 (31%), Positives = 58/102 (56%)
Frame = -3
Query: 1948 MEKSEIERDLVTYITLVSGVSRNIRSLDGKWLVPQRQYEEYKEMLFCLLHQSAMLPKKKC 1769
M K+ + DL+TY LV+G+ RNI + G ++ +E + MLF +L Q K
Sbjct: 186 MMKTNVAPDLITYGALVAGICRNI-ARRGMRPSLDKKLKEARYMLFRMLPQIIDTRNGKQ 244
Query: 1768 LKISVSSLEQIKFIALRLINKVKDTPLMPNLYLYNGIISGFC 1643
+ + E I+ +A +I +++ ++P+L++YNG+I+G C
Sbjct: 245 KDNQICTEEMIQ-VAQGIIQDLEENGMVPDLHIYNGMINGLC 285
>gb|EAZ15116.1| hypothetical protein OsJ_30529 [Oryza sativa Japonica Group]
Length = 906
Score = 81.3 bits (199), Expect(3) = 7e-33
Identities = 43/109 (39%), Positives = 64/109 (58%)
Frame = -1
Query: 1485 GLSSDNIVYNTLIRGLCKHGRLIDALSLSYTMLKKGLAPSKASYENLLSSLCANNWSVHA 1306
G D I YNT I+GL GR+ +ALS M K+G PSKASY+ L+ L A N
Sbjct: 764 GCVFDKITYNTFIKGLSLAGRMKEALSFLLMMHKRGFVPSKASYDKLMELLLAENAIDIV 823
Query: 1305 LKICQDMLANEYIPCGHNLKLLICMLDEENKWPEARFMYELLLKKRRFM 1159
L++ +DML Y P N L+ +L ++ +W EA ++ ++LKKR+++
Sbjct: 824 LQLFEDMLFQGYTPRYANYTSLLLVLAKDGRWSEADRIFTMMLKKRKYL 872
Score = 58.5 bits (140), Expect(3) = 7e-33
Identities = 25/54 (46%), Positives = 35/54 (64%)
Frame = -2
Query: 1640 AERMEDAYKHLDTMQKEGFQPNQVTFTILIDGHFRSGEINRAVSLFNRMNAQDC 1479
A +M+DAY L M + G PN VT+TIL++ R G+IN A+ LFN +N+ C
Sbjct: 712 ANKMDDAYSLLSVMDQTGILPNHVTYTILMNNQIRLGDINHAIQLFNSLNSDGC 765
Score = 50.4 bits (119), Expect(3) = 7e-33
Identities = 32/102 (31%), Positives = 58/102 (56%)
Frame = -3
Query: 1948 MEKSEIERDLVTYITLVSGVSRNIRSLDGKWLVPQRQYEEYKEMLFCLLHQSAMLPKKKC 1769
M K+ + DL+TY LV+G+ RNI + G ++ +E + MLF +L Q K
Sbjct: 611 MMKTNVAPDLITYGALVTGICRNI-ARRGMRPSLAKKLKEARYMLFRMLPQIIDTRNGKQ 669
Query: 1768 LKISVSSLEQIKFIALRLINKVKDTPLMPNLYLYNGIISGFC 1643
+ + E I+ +A +I +++ ++P+L++YNG+I+G C
Sbjct: 670 KDNQICTEEMIQ-VAQGIIQDLEENGMVPDLHIYNGMINGLC 710
>sp|P29130.2|PHYB_TOBAC RecName: Full=Phytochrome B gi|295346|gb|AAA34092.1| type II
phytochrome [Nicotiana tabacum]
Length = 1132
Score = 148 bits (373), Expect = 1e-32
Identities = 80/108 (74%), Positives = 90/108 (83%), Gaps = 1/108 (0%)
Frame = -2
Query: 563 ANPELQQALRVHRQQEKKCYSRMKELAYICQEIKNPLNDMCFAHSLLVATYLTENQEQYL 384
A+PELQQALRV RQQEKKCYS+MKELAY+CQEIK+PLN + F +SLL AT LTENQ+QYL
Sbjct: 878 ASPELQQALRVQRQQEKKCYSQMKELAYLCQEIKSPLNGIRFTNSLLEATDLTENQKQYL 937
Query: 383 EASAACERQMSKIIR-C*YGNIEDDSLTIEKEEFFLGV*QNAVVGHVI 243
E SAACERQMSKIIR NIED SLT+EKEEFFLG +AVV V+
Sbjct: 938 ETSAACERQMSKIIRDVDLENIEDGSLTLEKEEFFLGSVIDAVVSQVM 985