BLASTX nr result

ID: Atropa21_contig00002841 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00002841
         (468 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006366692.1| PREDICTED: poly(A) polymerase-like isoform X...   241   7e-62
ref|XP_006366691.1| PREDICTED: poly(A) polymerase-like isoform X...   241   7e-62
ref|XP_006366690.1| PREDICTED: poly(A) polymerase-like isoform X...   241   7e-62
ref|XP_004245142.1| PREDICTED: poly(A) polymerase-like [Solanum ...   236   2e-60

>ref|XP_006366692.1| PREDICTED: poly(A) polymerase-like isoform X3 [Solanum tuberosum]
          Length = 780

 Score =  241 bits (615), Expect = 7e-62
 Identities = 133/172 (77%), Positives = 136/172 (79%), Gaps = 17/172 (9%)
 Frame = -3

Query: 466  SISPQRIGSVSPLDSSCWSDGSSQTIVSDESQRELESSCL------------LGSRNDAS 323
            SISPQRIGSVSPL SSC SDGSSQ I+SDESQRE ESSCL            L SR+DAS
Sbjct: 552  SISPQRIGSVSPLGSSCRSDGSSQIIISDESQREFESSCLMDSSDDGSLHRILRSRSDAS 611

Query: 322  LSDSSICTPDSLNYTLSRGSTLSGVSREVDLDSSNTKSFPSKEVLSPCEEDICTRDVQTF 143
             SDSSICTPDSLNYT SRGS L GVSREVDLDSSNT SFPSKEV  PC EDICTRDVQTF
Sbjct: 612  PSDSSICTPDSLNYTTSRGSILLGVSREVDLDSSNTISFPSKEVPGPC-EDICTRDVQTF 670

Query: 142  QVLQNDEKGVICGSLQQD-----NEPCLQTGCAESFERVPVSNSNIQNLPCE 2
            QVLQNDEKG I GSL QD     NEPC+QTGCAES ERVPVSNSNI NL CE
Sbjct: 671  QVLQNDEKGEILGSLHQDIVGQLNEPCIQTGCAESLERVPVSNSNIHNLTCE 722


>ref|XP_006366691.1| PREDICTED: poly(A) polymerase-like isoform X2 [Solanum tuberosum]
          Length = 781

 Score =  241 bits (615), Expect = 7e-62
 Identities = 133/172 (77%), Positives = 136/172 (79%), Gaps = 17/172 (9%)
 Frame = -3

Query: 466  SISPQRIGSVSPLDSSCWSDGSSQTIVSDESQRELESSCL------------LGSRNDAS 323
            SISPQRIGSVSPL SSC SDGSSQ I+SDESQRE ESSCL            L SR+DAS
Sbjct: 552  SISPQRIGSVSPLGSSCRSDGSSQIIISDESQREFESSCLMDSSDDGSLHRILRSRSDAS 611

Query: 322  LSDSSICTPDSLNYTLSRGSTLSGVSREVDLDSSNTKSFPSKEVLSPCEEDICTRDVQTF 143
             SDSSICTPDSLNYT SRGS L GVSREVDLDSSNT SFPSKEV  PC EDICTRDVQTF
Sbjct: 612  PSDSSICTPDSLNYTTSRGSILLGVSREVDLDSSNTISFPSKEVPGPC-EDICTRDVQTF 670

Query: 142  QVLQNDEKGVICGSLQQD-----NEPCLQTGCAESFERVPVSNSNIQNLPCE 2
            QVLQNDEKG I GSL QD     NEPC+QTGCAES ERVPVSNSNI NL CE
Sbjct: 671  QVLQNDEKGEILGSLHQDIVGQLNEPCIQTGCAESLERVPVSNSNIHNLTCE 722


>ref|XP_006366690.1| PREDICTED: poly(A) polymerase-like isoform X1 [Solanum tuberosum]
          Length = 783

 Score =  241 bits (615), Expect = 7e-62
 Identities = 133/172 (77%), Positives = 136/172 (79%), Gaps = 17/172 (9%)
 Frame = -3

Query: 466  SISPQRIGSVSPLDSSCWSDGSSQTIVSDESQRELESSCL------------LGSRNDAS 323
            SISPQRIGSVSPL SSC SDGSSQ I+SDESQRE ESSCL            L SR+DAS
Sbjct: 552  SISPQRIGSVSPLGSSCRSDGSSQIIISDESQREFESSCLMDSSDDGSLHRILRSRSDAS 611

Query: 322  LSDSSICTPDSLNYTLSRGSTLSGVSREVDLDSSNTKSFPSKEVLSPCEEDICTRDVQTF 143
             SDSSICTPDSLNYT SRGS L GVSREVDLDSSNT SFPSKEV  PC EDICTRDVQTF
Sbjct: 612  PSDSSICTPDSLNYTTSRGSILLGVSREVDLDSSNTISFPSKEVPGPC-EDICTRDVQTF 670

Query: 142  QVLQNDEKGVICGSLQQD-----NEPCLQTGCAESFERVPVSNSNIQNLPCE 2
            QVLQNDEKG I GSL QD     NEPC+QTGCAES ERVPVSNSNI NL CE
Sbjct: 671  QVLQNDEKGEILGSLHQDIVGQLNEPCIQTGCAESLERVPVSNSNIHNLTCE 722


>ref|XP_004245142.1| PREDICTED: poly(A) polymerase-like [Solanum lycopersicum]
          Length = 788

 Score =  236 bits (602), Expect = 2e-60
 Identities = 130/172 (75%), Positives = 137/172 (79%), Gaps = 17/172 (9%)
 Frame = -3

Query: 466  SISPQRIGSVSPLDSSCWSDGSSQTIVSDESQRELESSCL------------LGSRNDAS 323
            SISPQRIGSVSPL SSC SDGSSQ I+SDESQRELESSCL            L SR+D+S
Sbjct: 553  SISPQRIGSVSPLGSSCRSDGSSQIIISDESQRELESSCLMDSSDDRSLHRILRSRSDSS 612

Query: 322  LSDSSICTPDSLNYTLSRGSTLSGVSREVDLDSSNTKSFPSKEVLSPCEEDICTRDVQTF 143
             SDSSICTPDSLNYT  RGSTL GVSREV+LDSSNTKS P+KEVLSPC EDIC+RDVQTF
Sbjct: 613  PSDSSICTPDSLNYTTLRGSTLLGVSREVELDSSNTKSLPNKEVLSPC-EDICSRDVQTF 671

Query: 142  QVLQNDEKGVICGSLQQD-----NEPCLQTGCAESFERVPVSNSNIQNLPCE 2
            QVLQNDEKG I GSL QD     NEPC+QT CAES ERV VSNSN QNL CE
Sbjct: 672  QVLQNDEKGEILGSLHQDIVGQLNEPCIQTRCAESLERVTVSNSNTQNLTCE 723


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