BLASTX nr result
ID: Atropa21_contig00002756
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00002756
(526 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001275204.1| ribosomal protein L24-like protein [Solanum ... 80 7e-15
ref|XP_004246582.1| PREDICTED: 60S ribosomal protein L24-like [S... 80 2e-13
ref|XP_006341189.1| PREDICTED: 60S ribosomal protein L24 [Solanu... 79 8e-13
ref|XP_006339101.1| PREDICTED: 60S ribosomal protein L24-like [S... 79 8e-13
ref|XP_004249675.1| PREDICTED: 60S ribosomal protein L24-like [S... 79 8e-13
ref|XP_004249467.1| PREDICTED: 60S ribosomal protein L24-like [S... 79 8e-13
ref|NP_001275450.1| 60S ribosomal protein L24-like [Solanum tube... 79 8e-13
ref|XP_002305219.1| 60S ribosomal protein L24 [Populus trichocar... 79 8e-13
ref|XP_002321904.1| hypothetical protein POPTR_0015s13330g [Popu... 78 1e-12
ref|XP_006657567.1| PREDICTED: 60S ribosomal protein L24-like is... 78 1e-12
gb|EMT31808.1| 60S ribosomal protein L24 [Aegilops tauschii] 78 1e-12
gb|EMS67681.1| Zinc finger protein VAR3, chloroplastic [Triticum... 78 1e-12
ref|XP_004137862.1| PREDICTED: 60S ribosomal protein L24-like [C... 78 1e-12
sp|P50888.1|RL24_HORVU RecName: Full=60S ribosomal protein L24 g... 78 1e-12
ref|XP_003574678.1| PREDICTED: 60S ribosomal protein L24-like [B... 78 1e-12
ref|XP_003564475.1| PREDICTED: 60S ribosomal protein L24-like [B... 78 1e-12
gb|EEC81749.1| hypothetical protein OsI_25404 [Oryza sativa Indi... 78 1e-12
ref|XP_002528634.1| 60S ribosomal protein L24, putative [Ricinus... 77 2e-12
ref|XP_006644899.1| PREDICTED: 60S ribosomal protein L24-like [O... 77 3e-12
ref|XP_004970361.1| PREDICTED: 60S ribosomal protein L24-like [S... 77 3e-12
>ref|NP_001275204.1| ribosomal protein L24-like protein [Solanum tuberosum]
gi|82400154|gb|ABB72816.1| ribosomal protein L24-like
protein [Solanum tuberosum]
Length = 171
Score = 80.1 bits (196), Expect(2) = 7e-15
Identities = 46/65 (70%), Positives = 46/65 (70%)
Frame = -3
Query: 524 RRTTKKPYSRSIVGATLEVIQKKRAERPEVRDAAREAALRXXXXXXXXXXXXXXXXXXEV 345
RR TKKPYSRSIVGATLEVIQKKRAERPEVRDAAREAALR EV
Sbjct: 74 RRATKKPYSRSIVGATLEVIQKKRAERPEVRDAAREAALREIKERIKKTKDEKKAKKAEV 133
Query: 344 MAKSQ 330
MAKSQ
Sbjct: 134 MAKSQ 138
Score = 25.8 bits (55), Expect(2) = 7e-15
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -1
Query: 292 KALSLVAVVENVKRLFM 242
K L+L VVENVK LFM
Sbjct: 152 KGLNLAVVVENVKLLFM 168
>ref|XP_004246582.1| PREDICTED: 60S ribosomal protein L24-like [Solanum lycopersicum]
Length = 162
Score = 80.5 bits (197), Expect = 2e-13
Identities = 46/65 (70%), Positives = 47/65 (72%)
Frame = -3
Query: 524 RRTTKKPYSRSIVGATLEVIQKKRAERPEVRDAAREAALRXXXXXXXXXXXXXXXXXXEV 345
RRTTKKPYSRSIVGATLEVIQKKRAERPEVRDAAREAALR EV
Sbjct: 74 RRTTKKPYSRSIVGATLEVIQKKRAERPEVRDAAREAALREIKERIKKTKDEKKAKKAEV 133
Query: 344 MAKSQ 330
+AKSQ
Sbjct: 134 VAKSQ 138
>ref|XP_006341189.1| PREDICTED: 60S ribosomal protein L24 [Solanum tuberosum]
Length = 163
Score = 78.6 bits (192), Expect = 8e-13
Identities = 45/65 (69%), Positives = 46/65 (70%)
Frame = -3
Query: 524 RRTTKKPYSRSIVGATLEVIQKKRAERPEVRDAAREAALRXXXXXXXXXXXXXXXXXXEV 345
RR TKKPYSRSIVGATLEVIQKKRAERPEVRDAAREAALR EV
Sbjct: 74 RRATKKPYSRSIVGATLEVIQKKRAERPEVRDAAREAALREIKERIKKTKDEKKAKKAEV 133
Query: 344 MAKSQ 330
+AKSQ
Sbjct: 134 VAKSQ 138
>ref|XP_006339101.1| PREDICTED: 60S ribosomal protein L24-like [Solanum tuberosum]
Length = 163
Score = 78.6 bits (192), Expect = 8e-13
Identities = 45/65 (69%), Positives = 45/65 (69%)
Frame = -3
Query: 524 RRTTKKPYSRSIVGATLEVIQKKRAERPEVRDAAREAALRXXXXXXXXXXXXXXXXXXEV 345
RRTTKKPYSRSIVGATLEVIQKKR ERPEVRDAAREAALR EV
Sbjct: 74 RRTTKKPYSRSIVGATLEVIQKKRTERPEVRDAAREAALREIKERIKKTKDEKKAKKAEV 133
Query: 344 MAKSQ 330
AKSQ
Sbjct: 134 QAKSQ 138
>ref|XP_004249675.1| PREDICTED: 60S ribosomal protein L24-like [Solanum lycopersicum]
Length = 164
Score = 78.6 bits (192), Expect = 8e-13
Identities = 45/65 (69%), Positives = 45/65 (69%)
Frame = -3
Query: 524 RRTTKKPYSRSIVGATLEVIQKKRAERPEVRDAAREAALRXXXXXXXXXXXXXXXXXXEV 345
RRTTKKPYSRSIVGATLEVIQKKR ERPEVRDAAREAALR EV
Sbjct: 74 RRTTKKPYSRSIVGATLEVIQKKRTERPEVRDAAREAALREIKERIKKTKDEKKAKKAEV 133
Query: 344 MAKSQ 330
AKSQ
Sbjct: 134 QAKSQ 138
>ref|XP_004249467.1| PREDICTED: 60S ribosomal protein L24-like [Solanum lycopersicum]
Length = 163
Score = 78.6 bits (192), Expect = 8e-13
Identities = 45/65 (69%), Positives = 45/65 (69%)
Frame = -3
Query: 524 RRTTKKPYSRSIVGATLEVIQKKRAERPEVRDAAREAALRXXXXXXXXXXXXXXXXXXEV 345
RRTTKKPYSRSIVGATLEVIQKKR ERPEVRDAAREAALR EV
Sbjct: 74 RRTTKKPYSRSIVGATLEVIQKKRTERPEVRDAAREAALREIKERIKKTKDEKKAKKAEV 133
Query: 344 MAKSQ 330
AKSQ
Sbjct: 134 QAKSQ 138
>ref|NP_001275450.1| 60S ribosomal protein L24-like [Solanum tuberosum]
gi|413968460|gb|AFW90567.1| ribosomal protein L24
[Solanum tuberosum]
Length = 164
Score = 78.6 bits (192), Expect = 8e-13
Identities = 45/65 (69%), Positives = 45/65 (69%)
Frame = -3
Query: 524 RRTTKKPYSRSIVGATLEVIQKKRAERPEVRDAAREAALRXXXXXXXXXXXXXXXXXXEV 345
RRTTKKPYSRSIVGATLEVIQKKR ERPEVRDAAREAALR EV
Sbjct: 74 RRTTKKPYSRSIVGATLEVIQKKRTERPEVRDAAREAALREIKERIKKTKDEKKAKKAEV 133
Query: 344 MAKSQ 330
AKSQ
Sbjct: 134 QAKSQ 138
>ref|XP_002305219.1| 60S ribosomal protein L24 [Populus trichocarpa]
gi|118487980|gb|ABK95811.1| unknown [Populus
trichocarpa] gi|222848183|gb|EEE85730.1| 60S ribosomal
protein L24 [Populus trichocarpa]
Length = 163
Score = 78.6 bits (192), Expect = 8e-13
Identities = 44/65 (67%), Positives = 47/65 (72%)
Frame = -3
Query: 524 RRTTKKPYSRSIVGATLEVIQKKRAERPEVRDAAREAALRXXXXXXXXXXXXXXXXXXEV 345
RRTTKKPYSRSIVGATLEVIQKKRAE+PEVRDAAREAALR EV
Sbjct: 74 RRTTKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALREIKERIKKTKDEKKAKKAEV 133
Query: 344 MAKSQ 330
M+K+Q
Sbjct: 134 MSKAQ 138
>ref|XP_002321904.1| hypothetical protein POPTR_0015s13330g [Populus trichocarpa]
gi|222868900|gb|EEF06031.1| hypothetical protein
POPTR_0015s13330g [Populus trichocarpa]
Length = 163
Score = 78.2 bits (191), Expect = 1e-12
Identities = 44/65 (67%), Positives = 46/65 (70%)
Frame = -3
Query: 524 RRTTKKPYSRSIVGATLEVIQKKRAERPEVRDAAREAALRXXXXXXXXXXXXXXXXXXEV 345
RRTTKKPYSRSIVGATLEVIQKKR E+PEVRDAAREAALR EV
Sbjct: 74 RRTTKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREIKERIKKTKDEKKAKKAEV 133
Query: 344 MAKSQ 330
MAK+Q
Sbjct: 134 MAKAQ 138
>ref|XP_006657567.1| PREDICTED: 60S ribosomal protein L24-like isoform X1 [Oryza
brachyantha] gi|573950553|ref|XP_006657568.1| PREDICTED:
60S ribosomal protein L24-like isoform X2 [Oryza
brachyantha]
Length = 161
Score = 77.8 bits (190), Expect = 1e-12
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = -3
Query: 524 RRTTKKPYSRSIVGATLEVIQKKRAERPEVRDAAREAALR 405
RRTTKKPYSRSIVGATLEVIQKKRAE+PEVRDAAREAALR
Sbjct: 74 RRTTKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALR 113
>gb|EMT31808.1| 60S ribosomal protein L24 [Aegilops tauschii]
Length = 162
Score = 77.8 bits (190), Expect = 1e-12
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = -3
Query: 524 RRTTKKPYSRSIVGATLEVIQKKRAERPEVRDAAREAALR 405
RRTTKKPYSRSIVGATLEVIQKKRAE+PEVRDAAREAALR
Sbjct: 74 RRTTKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALR 113
>gb|EMS67681.1| Zinc finger protein VAR3, chloroplastic [Triticum urartu]
Length = 1307
Score = 77.8 bits (190), Expect = 1e-12
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = -3
Query: 524 RRTTKKPYSRSIVGATLEVIQKKRAERPEVRDAAREAALR 405
RRTTKKPYSRSIVGATLEVIQKKRAE+PEVRDAAREAALR
Sbjct: 1144 RRTTKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALR 1183
>ref|XP_004137862.1| PREDICTED: 60S ribosomal protein L24-like [Cucumis sativus]
gi|449501000|ref|XP_004161250.1| PREDICTED: 60S
ribosomal protein L24-like [Cucumis sativus]
Length = 164
Score = 77.8 bits (190), Expect = 1e-12
Identities = 44/65 (67%), Positives = 46/65 (70%)
Frame = -3
Query: 524 RRTTKKPYSRSIVGATLEVIQKKRAERPEVRDAAREAALRXXXXXXXXXXXXXXXXXXEV 345
RR TKKPYSRSIVGATLEVIQKKRAE+PEVRDAAREAALR EV
Sbjct: 74 RRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALREIKERIKKTKDEKKAKKAEV 133
Query: 344 MAKSQ 330
+AKSQ
Sbjct: 134 LAKSQ 138
>sp|P50888.1|RL24_HORVU RecName: Full=60S ribosomal protein L24 gi|1154859|emb|CAA63960.1|
L24 ribosomal protein [Hordeum vulgare subsp. vulgare]
gi|326506376|dbj|BAJ86506.1| predicted protein [Hordeum
vulgare subsp. vulgare]
Length = 162
Score = 77.8 bits (190), Expect = 1e-12
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = -3
Query: 524 RRTTKKPYSRSIVGATLEVIQKKRAERPEVRDAAREAALR 405
RRTTKKPYSRSIVGATLEVIQKKRAE+PEVRDAAREAALR
Sbjct: 74 RRTTKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALR 113
>ref|XP_003574678.1| PREDICTED: 60S ribosomal protein L24-like [Brachypodium distachyon]
Length = 161
Score = 77.8 bits (190), Expect = 1e-12
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = -3
Query: 524 RRTTKKPYSRSIVGATLEVIQKKRAERPEVRDAAREAALR 405
RRTTKKPYSRSIVGATLEVIQKKRAE+PEVRDAAREAALR
Sbjct: 74 RRTTKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALR 113
>ref|XP_003564475.1| PREDICTED: 60S ribosomal protein L24-like [Brachypodium distachyon]
Length = 161
Score = 77.8 bits (190), Expect = 1e-12
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = -3
Query: 524 RRTTKKPYSRSIVGATLEVIQKKRAERPEVRDAAREAALR 405
RRTTKKPYSRSIVGATLEVIQKKRAE+PEVRDAAREAALR
Sbjct: 74 RRTTKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALR 113
>gb|EEC81749.1| hypothetical protein OsI_25404 [Oryza sativa Indica Group]
Length = 227
Score = 77.8 bits (190), Expect = 1e-12
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = -3
Query: 524 RRTTKKPYSRSIVGATLEVIQKKRAERPEVRDAAREAALR 405
RRTTKKPYSRSIVGATLEVIQKKRAE+PEVRDAAREAALR
Sbjct: 140 RRTTKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALR 179
>ref|XP_002528634.1| 60S ribosomal protein L24, putative [Ricinus communis]
gi|223531923|gb|EEF33737.1| 60S ribosomal protein L24,
putative [Ricinus communis]
Length = 186
Score = 77.0 bits (188), Expect = 2e-12
Identities = 43/65 (66%), Positives = 46/65 (70%)
Frame = -3
Query: 524 RRTTKKPYSRSIVGATLEVIQKKRAERPEVRDAAREAALRXXXXXXXXXXXXXXXXXXEV 345
RRTTKKPYSRSIVGATLEVIQK+R E+PEVRDAAREAALR EV
Sbjct: 96 RRTTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIKKTKDAKKAKKAEV 155
Query: 344 MAKSQ 330
MAK+Q
Sbjct: 156 MAKTQ 160
>ref|XP_006644899.1| PREDICTED: 60S ribosomal protein L24-like [Oryza brachyantha]
Length = 162
Score = 76.6 bits (187), Expect = 3e-12
Identities = 38/40 (95%), Positives = 40/40 (100%)
Frame = -3
Query: 524 RRTTKKPYSRSIVGATLEVIQKKRAERPEVRDAAREAALR 405
RRTTKKPYSRSIVGATLEVIQKKR+E+PEVRDAAREAALR
Sbjct: 74 RRTTKKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALR 113
>ref|XP_004970361.1| PREDICTED: 60S ribosomal protein L24-like [Setaria italica]
Length = 162
Score = 76.6 bits (187), Expect = 3e-12
Identities = 38/40 (95%), Positives = 40/40 (100%)
Frame = -3
Query: 524 RRTTKKPYSRSIVGATLEVIQKKRAERPEVRDAAREAALR 405
RRTTKKPYSRSIVGATLEVIQKKR+E+PEVRDAAREAALR
Sbjct: 74 RRTTKKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALR 113