BLASTX nr result

ID: Atropa21_contig00002714 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00002714
         (3427 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB93772.1| SRE1b [Solanum tuberosum]                               63   1e-06

>gb|AAB93772.1| SRE1b [Solanum tuberosum]
          Length = 86

 Score = 62.8 bits (151), Expect = 1e-06
 Identities = 44/96 (45%), Positives = 49/96 (51%), Gaps = 9/96 (9%)
 Frame = -1

Query: 2719 MMGALAWQVTIPNKVPIFVFGGEMVRGFLPGXXXXXXXXXXXXXSPE*FPGIVCKIYASN 2540
            M GALAWQVT PNK  IFVFGGEMVRGFLP                     ++C +  S 
Sbjct: 1    MPGALAWQVTKPNKDAIFVFGGEMVRGFLPDSPLCVSS----------LASLLCFLELSA 50

Query: 2539 -----NVASNLVVTCP----VLFICKVKAALHLFKG 2459
                 NV+SNL    P       I KV AAL+LFKG
Sbjct: 51   RSTQINVSSNLAFKSPYPNEAFVIYKVIAALYLFKG 86


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