BLASTX nr result

ID: Atropa21_contig00002630 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00002630
         (1237 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006360133.1| PREDICTED: uncharacterized protein LOC102587...    71   8e-10
ref|XP_004244195.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    71   8e-10
ref|XP_004235012.1| PREDICTED: GRF1-interacting factor 3-like [S...    71   1e-09
ref|XP_006347497.1| PREDICTED: GRF1-interacting factor 2-like [S...    70   1e-09

>ref|XP_006360133.1| PREDICTED: uncharacterized protein LOC102587335 [Solanum tuberosum]
          Length = 449

 Score = 71.2 bits (173), Expect = 8e-10
 Identities = 36/37 (97%), Positives = 37/37 (100%)
 Frame = +3

Query: 1125 VNKAVDSLTKEFREVDNLVARNTARVLRAFQRVKVGS 1235
            VNKAVDSL+KEFREVDNLVARNTARVLRAFQRVKVGS
Sbjct: 47   VNKAVDSLSKEFREVDNLVARNTARVLRAFQRVKVGS 83


>ref|XP_004244195.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein YnbB-like
            [Solanum lycopersicum]
          Length = 479

 Score = 71.2 bits (173), Expect = 8e-10
 Identities = 36/37 (97%), Positives = 37/37 (100%)
 Frame = +3

Query: 1125 VNKAVDSLTKEFREVDNLVARNTARVLRAFQRVKVGS 1235
            VNKAVDSL+KEFREVDNLVARNTARVLRAFQRVKVGS
Sbjct: 47   VNKAVDSLSKEFREVDNLVARNTARVLRAFQRVKVGS 83


>ref|XP_004235012.1| PREDICTED: GRF1-interacting factor 3-like [Solanum lycopersicum]
          Length = 199

 Score = 70.9 bits (172), Expect = 1e-09
 Identities = 50/122 (40%), Positives = 59/122 (48%), Gaps = 8/122 (6%)
 Frame = +2

Query: 2   QSAATSQMAPSITQPGNXXXXXXXXXXXXXXGPIG-QKLPFQLNALPSXXXXXXXXXXXX 178
           QSAATSQ A S  Q GN                +   KLPFQLNALP+            
Sbjct: 78  QSAATSQ-AQSTPQLGNQMQQTQAALQQQQQQGVAISKLPFQLNALPTQEQQQQMLQFQQ 136

Query: 179 XXXX---YGVGPAGNKPMHQLMRPGLTSPGTVDVRGSRHSTSE----DGLAKLAPGHVNG 337
                  YG GP  N  M QLM+PGL S GT+DVRG++  + E    DGL K    HVNG
Sbjct: 137 QQQFQGQYGFGPTANNAMRQLMQPGLNSSGTMDVRGNKQGSLEGNPSDGLGKSGGRHVNG 196

Query: 338 DK 343
           ++
Sbjct: 197 ER 198


>ref|XP_006347497.1| PREDICTED: GRF1-interacting factor 2-like [Solanum tuberosum]
          Length = 197

 Score = 70.5 bits (171), Expect = 1e-09
 Identities = 50/122 (40%), Positives = 59/122 (48%), Gaps = 8/122 (6%)
 Frame = +2

Query: 2   QSAATSQMAPSITQPGNXXXXXXXXXXXXXXGPIG-QKLPFQLNALPSXXXXXXXXXXXX 178
           QSAATSQ APS  Q GN                +   KLPFQLNALP+            
Sbjct: 76  QSAATSQ-APSTPQLGNQMQQTQAALQQQQQQGVAISKLPFQLNALPTQEQQQQMLQFQQ 134

Query: 179 XXXX---YGVGPAGNKPMHQLMRPGLTSPGTVDVRGSRHSTSE----DGLAKLAPGHVNG 337
                  YG GP  N  M QLM+PGL S GT+DVRG++  + E    DGL K    HVN 
Sbjct: 135 QQQFQGQYGFGPTANNAMRQLMQPGLNSSGTMDVRGNKQGSLEGNPSDGLGKSGGRHVNV 194

Query: 338 DK 343
           ++
Sbjct: 195 ER 196


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