BLASTX nr result

ID: Atropa21_contig00002608 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00002608
         (1594 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006360934.1| PREDICTED: splicing regulatory glutamine/lys...   236   2e-59
ref|XP_004247875.1| PREDICTED: uncharacterized protein LOC101244...   216   2e-53
ref|XP_002270255.1| PREDICTED: uncharacterized protein LOC100244...    62   9e-07
emb|CAN81529.1| hypothetical protein VITISV_010597 [Vitis vinifera]    62   9e-07

>ref|XP_006360934.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like
            [Solanum tuberosum]
          Length = 900

 Score =  236 bits (603), Expect = 2e-59
 Identities = 152/342 (44%), Positives = 161/342 (47%), Gaps = 2/342 (0%)
 Frame = +1

Query: 220  YSGYEDERRSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYHDDSGSP 399
            YSGYEDERR Y                                         Y DDSGSP
Sbjct: 559  YSGYEDERRPYRDVRYANERSRRRDFVRFYDRRSPVSRRNRSRSTSPRTRKSYRDDSGSP 618

Query: 400  KRRRESPAHKTSRASRHEPLSPEHGRRSRSSPKDGEXXXXXXXXXXXXXAEVRDQSDGKL 579
            K RRESPA KTSRASRHE LSPEH R+SRSSPKDGE             AEVRDQSD KL
Sbjct: 619  KHRRESPALKTSRASRHESLSPEHRRKSRSSPKDGERKSKYSRRSRSKSAEVRDQSDDKL 678

Query: 580  EGSRSEKAKQKDQGRSASPQVAEDAQKKMSPEVVEEXXXXXXXXXXXXXXXXXXXXXXXX 759
            EGSR EK++QKDQ RSASPQV EDAQKKMSPEVVEE                        
Sbjct: 679  EGSRGEKSRQKDQRRSASPQVDEDAQKKMSPEVVEESKSKQRRTSRSRSPEEKHLSSRSR 738

Query: 760  XXXXXXXXXXXXXXXXXXXXXXDHSSDKLDRNKGD--XXXXXXXXXXXXXXXXXXHRSRD 933
                                   HSSDKLDRNKGD                    H S  
Sbjct: 739  EEKRKHHARRRSRSRSKSPEEKVHSSDKLDRNKGDKPKHRSRRHSKSRSRSPEERHHSSA 798

Query: 934  KLEXXXXXXXXXXXXXXXXXXXVDDKQPGSKQSASRSDNXXXXXXXXXXXXXXXXXXXXX 1113
            KLE                   VDDKQ G+KQSASRSD+                     
Sbjct: 799  KLERSRKEKSKSRSKKRSRSRSVDDKQHGTKQSASRSDSRRSKLRARSRSNSSESRHGSG 858

Query: 1114 XDETIKDEARGNRGHKRSSRQYESNHGTTDASLMEEDPAKGM 1239
             DETIKDE RG+RGH+R SRQ + NHGTT+ SLMEEDPAKGM
Sbjct: 859  QDETIKDEVRGHRGHQRRSRQDDHNHGTTEISLMEEDPAKGM 900


>ref|XP_004247875.1| PREDICTED: uncharacterized protein LOC101244905 [Solanum
            lycopersicum]
          Length = 897

 Score =  216 bits (550), Expect = 2e-53
 Identities = 140/337 (41%), Positives = 155/337 (45%), Gaps = 2/337 (0%)
 Frame = +1

Query: 220  YSGYEDERRSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYHDDSGSP 399
            YSGYEDERRSY                                         YHDDSGSP
Sbjct: 559  YSGYEDERRSYRDVRYANERSRRRDFVRFYDRRSPVSRRNRSRSTSPRTRKSYHDDSGSP 618

Query: 400  KRRRESPAHKTSRASRHEPLSPEHGRRSRSSPKDGEXXXXXXXXXXXXXAEVRDQSDGKL 579
            K RRESPA KTSRASRHE LSPEH R+SRSSPKDGE             AE RDQSD KL
Sbjct: 619  KHRRESPALKTSRASRHESLSPEHRRKSRSSPKDGERKSKYSRRSRSKSAEFRDQSDDKL 678

Query: 580  EGSRSEKAKQKDQGRSASPQVAEDAQKKMSPEVVEEXXXXXXXXXXXXXXXXXXXXXXXX 759
            E S+ EK +QKDQ RSASPQV EDAQKKMSPEVVEE                        
Sbjct: 679  ERSKGEKTRQKDQRRSASPQVDEDAQKKMSPEVVEESKSKQRRASRSRSPEEKHLSSRSR 738

Query: 760  XXXXXXXXXXXXXXXXXXXXXXDHSSDKLDRNKGDXXXXXXXXXXXXXXXXXXHR--SRD 933
                                   HSSDKLDRNKGD                   +  S  
Sbjct: 739  EEKRKHHARRRSRSRSKSPEEKVHSSDKLDRNKGDKRKHRSRRHSKSRSRSPEEKQHSSA 798

Query: 934  KLEXXXXXXXXXXXXXXXXXXXVDDKQPGSKQSASRSDNXXXXXXXXXXXXXXXXXXXXX 1113
            KLE                   VD+KQ G+KQSAS SD+                     
Sbjct: 799  KLERSRKEKSKSRSKRRSRSRSVDEKQHGTKQSASHSDSRRSKQRARSRSNSSESRHGSG 858

Query: 1114 XDETIKDEARGNRGHKRSSRQYESNHGTTDASLMEED 1224
             DET+KDE RG+RGH++ SRQ ++NHGTT+ SLMEE+
Sbjct: 859  QDETLKDEGRGHRGHQKRSRQDDNNHGTTEISLMEEE 895


>ref|XP_002270255.1| PREDICTED: uncharacterized protein LOC100244513 [Vitis vinifera]
          Length = 926

 Score = 61.6 bits (148), Expect = 9e-07
 Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
 Frame = +1

Query: 376 YHDDSGSPKRRRESPAHKTSRASRHEPLSPEHGRRSRSSPK-DGEXXXXXXXXXXXXXAE 552
           Y  DS SPKRR ES +H+T ++SR  P SP H R SRSSP+ D +              E
Sbjct: 607 YRADSESPKRRVESSSHRTRKSSRVSPKSPRHHRGSRSSPRNDDDNKSKRRRRSRSKSVE 666

Query: 553 VRDQSDGKLEGSRSEKAKQKDQGRSAS 633
            +  S+ K++  R +K+K +D+ RS S
Sbjct: 667 GKHYSNEKIDERRDKKSKHRDRRRSRS 693


>emb|CAN81529.1| hypothetical protein VITISV_010597 [Vitis vinifera]
          Length = 774

 Score = 61.6 bits (148), Expect = 9e-07
 Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
 Frame = +1

Query: 376 YHDDSGSPKRRRESPAHKTSRASRHEPLSPEHGRRSRSSPK-DGEXXXXXXXXXXXXXAE 552
           Y  DS SPKRR ES +H+T ++SR  P SP H R SRSSP+ D +              E
Sbjct: 455 YRADSESPKRRVESSSHRTRKSSRVSPKSPRHHRGSRSSPRNDDDNKSKRRRRSRSKSVE 514

Query: 553 VRDQSDGKLEGSRSEKAKQKDQGRSAS 633
            +  S+ K++  R +K+K +D+ RS S
Sbjct: 515 GKHYSNEKIDERRDKKSKHRDRRRSRS 541


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