BLASTX nr result

ID: Atropa21_contig00002607 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00002607
         (1791 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006360934.1| PREDICTED: splicing regulatory glutamine/lys...   157   2e-35
ref|XP_004247875.1| PREDICTED: uncharacterized protein LOC101244...   150   2e-33

>ref|XP_006360934.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like
            [Solanum tuberosum]
          Length = 900

 Score =  157 bits (396), Expect = 2e-35
 Identities = 90/161 (55%), Positives = 95/161 (59%)
 Frame = +1

Query: 379  DDSGSPKHRRESPAHKTSRASRRESLSPEHGRRSRSSPKDGEXXXXXXXXXXXXXAEVRD 558
            DDSGSPKHRRESPA KTSRASR ESLSPEH R+SRSSPKDGE             AEVRD
Sbjct: 613  DDSGSPKHRRESPALKTSRASRHESLSPEHRRKSRSSPKDGERKSKYSRRSRSKSAEVRD 672

Query: 559  QSDDKLEGSRGVKAKQKDQERSASPQVVEDAQKKLSPEVMEEXXXXXXXXXXXXXXXXXX 738
            QSDDKLEGSRG K++QKDQ RSASPQV EDAQKK+SPEV+EE                  
Sbjct: 673  QSDDKLEGSRGEKSRQKDQRRSASPQVDEDAQKKMSPEVVEESKSKQRRTSRSRSPEEKH 732

Query: 739  XXXXXXXXXXXXXXXXXXXXXXXXXXXXDHSSDKLDRNKGD 861
                                         HSSDKLDRNKGD
Sbjct: 733  LSSRSREEKRKHHARRRSRSRSKSPEEKVHSSDKLDRNKGD 773



 Score = 73.2 bits (178), Expect = 4e-10
 Identities = 39/70 (55%), Positives = 42/70 (60%)
 Frame = +1

Query: 1027 QSASRSDNXXXXXXXXXXXXXXXXXXXXXXDETTKDEVRGHRGHKRSSRQYDSNHGTTDA 1206
            QSASRSD+                      DET KDEVRGHRGH+R SRQ D NHGTT+ 
Sbjct: 830  QSASRSDSRRSKLRARSRSNSSESRHGSGQDETIKDEVRGHRGHQRRSRQDDHNHGTTEI 889

Query: 1207 SLMEEDHAKG 1236
            SLMEED AKG
Sbjct: 890  SLMEEDPAKG 899


>ref|XP_004247875.1| PREDICTED: uncharacterized protein LOC101244905 [Solanum
            lycopersicum]
          Length = 897

 Score =  150 bits (379), Expect = 2e-33
 Identities = 87/161 (54%), Positives = 92/161 (57%)
 Frame = +1

Query: 379  DDSGSPKHRRESPAHKTSRASRRESLSPEHGRRSRSSPKDGEXXXXXXXXXXXXXAEVRD 558
            DDSGSPKHRRESPA KTSRASR ESLSPEH R+SRSSPKDGE             AE RD
Sbjct: 613  DDSGSPKHRRESPALKTSRASRHESLSPEHRRKSRSSPKDGERKSKYSRRSRSKSAEFRD 672

Query: 559  QSDDKLEGSRGVKAKQKDQERSASPQVVEDAQKKLSPEVMEEXXXXXXXXXXXXXXXXXX 738
            QSDDKLE S+G K +QKDQ RSASPQV EDAQKK+SPEV+EE                  
Sbjct: 673  QSDDKLERSKGEKTRQKDQRRSASPQVDEDAQKKMSPEVVEESKSKQRRASRSRSPEEKH 732

Query: 739  XXXXXXXXXXXXXXXXXXXXXXXXXXXXDHSSDKLDRNKGD 861
                                         HSSDKLDRNKGD
Sbjct: 733  LSSRSREEKRKHHARRRSRSRSKSPEEKVHSSDKLDRNKGD 773



 Score = 61.6 bits (148), Expect = 1e-06
 Identities = 32/66 (48%), Positives = 38/66 (57%)
 Frame = +1

Query: 1027 QSASRSDNXXXXXXXXXXXXXXXXXXXXXXDETTKDEVRGHRGHKRSSRQYDSNHGTTDA 1206
            QSAS SD+                      DET KDE RGHRGH++ SRQ D+NHGTT+ 
Sbjct: 830  QSASHSDSRRSKQRARSRSNSSESRHGSGQDETLKDEGRGHRGHQKRSRQDDNNHGTTEI 889

Query: 1207 SLMEED 1224
            SLMEE+
Sbjct: 890  SLMEEE 895


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