BLASTX nr result
ID: Atropa21_contig00002507
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00002507
(916 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006350243.1| PREDICTED: DNA-directed RNA polymerases IV a... 313 7e-83
ref|XP_004236644.1| PREDICTED: uncharacterized protein LOC101254... 298 1e-78
ref|XP_002274855.1| PREDICTED: uncharacterized protein LOC100246... 209 9e-52
gb|EMJ13139.1| hypothetical protein PRUPE_ppa010773mg [Prunus pe... 205 2e-50
ref|XP_002525033.1| conserved hypothetical protein [Ricinus comm... 204 5e-50
gb|EMJ13140.1| hypothetical protein PRUPE_ppa010773mg [Prunus pe... 201 4e-49
ref|XP_006467223.1| PREDICTED: DNA-directed RNA polymerases IV a... 191 4e-46
gb|EOY29035.1| DNA-directed RNA polymerase II subunit rpb4, puta... 191 4e-46
ref|XP_006449991.1| hypothetical protein CICLE_v10016499mg [Citr... 189 1e-45
ref|XP_004158834.1| PREDICTED: DNA-directed RNA polymerase II su... 188 3e-45
ref|XP_004134991.1| PREDICTED: uncharacterized protein LOC101213... 188 3e-45
ref|XP_002329936.1| predicted protein [Populus trichocarpa] gi|5... 184 3e-44
ref|XP_004293416.1| PREDICTED: uncharacterized protein LOC101305... 184 5e-44
ref|XP_006467222.1| PREDICTED: DNA-directed RNA polymerases IV a... 183 9e-44
gb|EOY29037.1| DNA-directed RNA polymerase II subunit rpb4, puta... 182 2e-43
ref|XP_006449990.1| hypothetical protein CICLE_v10016499mg [Citr... 181 3e-43
ref|XP_006398486.1| hypothetical protein EUTSA_v10001026mg [Eutr... 181 3e-43
gb|EXB64613.1| Calcineurin B-like protein 3 [Morus notabilis] 161 3e-37
ref|XP_003594343.1| DNA-directed RNA polymerase II subunit rpb4 ... 155 3e-35
gb|EOY29038.1| DNA-directed RNA polymerase II subunit rpb4, puta... 153 8e-35
>ref|XP_006350243.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 4-like
[Solanum tuberosum]
Length = 220
Score = 313 bits (801), Expect = 7e-83
Identities = 161/209 (77%), Positives = 171/209 (81%)
Frame = +2
Query: 11 MAEKGGKGFSLPKNGKSALKSPASKGKDDSLAKSKRGRKVQFDSEGSLDTNSTQSNGKAD 190
MAEKGGKGFSLPK+GKSALKSPASKGKDDS KSKRGRKVQFDSEGSLDTNST+SNGKAD
Sbjct: 1 MAEKGGKGFSLPKSGKSALKSPASKGKDDSSVKSKRGRKVQFDSEGSLDTNSTKSNGKAD 60
Query: 191 TPXXXXXXXXXXXXXXXXXXXXXXXAREPGPLELRVEQELPDNTICLMDCEVADILQGIQ 370
P A+ P PLELRVEQELP N+ CLMDCE ADILQGIQ
Sbjct: 61 IPSLKGDLGKAGKGEKAGSAGKSQKAKAPDPLELRVEQELPANSTCLMDCEAADILQGIQ 120
Query: 371 EQMVILSEDPAIKLPVSFDRGLTYAQRNKLYDDPQAVKQILKSLKVHGVSDGELCMIVNF 550
E MV+LS+DPAIKLPVSFDRGL YAQRN+LYD+PQAVKQIL+ LK HGVSDGELCMI NF
Sbjct: 121 ENMVVLSDDPAIKLPVSFDRGLAYAQRNRLYDNPQAVKQILEPLKQHGVSDGELCMIANF 180
Query: 551 HVESVDEVFALVPSFKTKKSKLRVPLENV 637
+ESVDEVFALVPSFK KKSKLRVPLENV
Sbjct: 181 PLESVDEVFALVPSFKNKKSKLRVPLENV 209
>ref|XP_004236644.1| PREDICTED: uncharacterized protein LOC101254374 [Solanum
lycopersicum]
Length = 220
Score = 298 bits (764), Expect = 1e-78
Identities = 154/209 (73%), Positives = 166/209 (79%)
Frame = +2
Query: 11 MAEKGGKGFSLPKNGKSALKSPASKGKDDSLAKSKRGRKVQFDSEGSLDTNSTQSNGKAD 190
MAEKGGKGFSLPK+GKS+LKSPASKGKDDS AKSKRGRKVQFDSEGSLDTNST+SNGKAD
Sbjct: 1 MAEKGGKGFSLPKSGKSSLKSPASKGKDDSSAKSKRGRKVQFDSEGSLDTNSTKSNGKAD 60
Query: 191 TPXXXXXXXXXXXXXXXXXXXXXXXAREPGPLELRVEQELPDNTICLMDCEVADILQGIQ 370
P A+ P PLELRVEQEL T C+MDCE ADILQGIQ
Sbjct: 61 IPSFKGDLGKAGKGEKAGSAGKSQKAKAPDPLELRVEQELSTKTTCMMDCEAADILQGIQ 120
Query: 371 EQMVILSEDPAIKLPVSFDRGLTYAQRNKLYDDPQAVKQILKSLKVHGVSDGELCMIVNF 550
E MV+LS+DPAIKLPVSFDRGL Y QR +LYD+PQAV+QIL LK HGVSDGELCMI NF
Sbjct: 121 ENMVVLSDDPAIKLPVSFDRGLAYGQRIRLYDNPQAVEQILGPLKQHGVSDGELCMIANF 180
Query: 551 HVESVDEVFALVPSFKTKKSKLRVPLENV 637
+ESVDEVFA VPSFK +KSKLRVPLENV
Sbjct: 181 PLESVDEVFAFVPSFKNRKSKLRVPLENV 209
>ref|XP_002274855.1| PREDICTED: uncharacterized protein LOC100246461 isoform 1 [Vitis
vinifera] gi|359495604|ref|XP_003635035.1| PREDICTED:
uncharacterized protein LOC100246461 isoform 2 [Vitis
vinifera] gi|297736694|emb|CBI25730.3| unnamed protein
product [Vitis vinifera]
Length = 239
Score = 209 bits (533), Expect = 9e-52
Identities = 116/216 (53%), Positives = 142/216 (65%), Gaps = 7/216 (3%)
Frame = +2
Query: 11 MAEKGGKGFSLPKN-GKSALKSPASK---GKDDSLAKSKRGRKVQFDSEGSLD---TNST 169
M EKGGKGFSL N GKS+ KSP GKDDS AKSKRGRKVQF++ G + T+S
Sbjct: 1 MGEKGGKGFSLNSNLGKSSTKSPLEASLTGKDDSAAKSKRGRKVQFNNGGLPEARLTSSL 60
Query: 170 QSNGKADTPXXXXXXXXXXXXXXXXXXXXXXXAREPGPLELRVEQELPDNTICLMDCEVA 349
S GK D P + P PLELR+EQELP N C+MDCE A
Sbjct: 61 MSGGKTDIPIAKGDLSKGGKGGRVLNGEKSAVPKPPAPLELRIEQELPKNAKCMMDCEAA 120
Query: 350 DILQGIQEQMVILSEDPAIKLPVSFDRGLTYAQRNKLYDDPQAVKQILKSLKVHGVSDGE 529
IL+GIQEQMV+LSEDP IK+P+SF++GL YAQ + Y PQ+V+ +L+ L +GVSDGE
Sbjct: 121 LILKGIQEQMVVLSEDPTIKIPLSFNKGLQYAQSSNCYASPQSVRLVLEPLSKYGVSDGE 180
Query: 530 LCMIVNFHVESVDEVFALVPSFKTKKSKLRVPLENV 637
+C+I N E++DEVFALVPS K K S LR PL++V
Sbjct: 181 ICVIANTCPETIDEVFALVPSLKPKWSTLREPLKDV 216
>gb|EMJ13139.1| hypothetical protein PRUPE_ppa010773mg [Prunus persica]
Length = 225
Score = 205 bits (522), Expect = 2e-50
Identities = 117/217 (53%), Positives = 145/217 (66%), Gaps = 8/217 (3%)
Frame = +2
Query: 11 MAEKGGKGFSLP--KNGKSALKSPAS------KGKDDSLAKSKRGRKVQFDSEGSLDTNS 166
M+EKGGKGFSLP K KS+LKS S KGKDDS KSK+GRKVQFDSEG + S
Sbjct: 1 MSEKGGKGFSLPTGKAVKSSLKSTPSTKDASLKGKDDSSTKSKKGRKVQFDSEGLHEPKS 60
Query: 167 TQSNGKADTPXXXXXXXXXXXXXXXXXXXXXXXAREPGPLELRVEQELPDNTICLMDCEV 346
S+ K D P +EP PLEL++EQELP + CLMDCE
Sbjct: 61 NFSS-KFDNPAAASGKDWGKGGKGDKVGNGRK--KEPQPLELKIEQELPQSAKCLMDCEA 117
Query: 347 ADILQGIQEQMVILSEDPAIKLPVSFDRGLTYAQRNKLYDDPQAVKQILKSLKVHGVSDG 526
ADILQGIQEQM++LS+DP IK+PVSFD+GL YA+R Y +PQ+V+++L++L +GVSDG
Sbjct: 118 ADILQGIQEQMILLSKDPTIKIPVSFDKGLQYAKRTSHYTNPQSVRKVLETLTKYGVSDG 177
Query: 527 ELCMIVNFHVESVDEVFALVPSFKTKKSKLRVPLENV 637
E+ +I N E+ DEVFALVPS KT +S L PL+ V
Sbjct: 178 EISVIANVCPETTDEVFALVPSLKTTRSVLSQPLKEV 214
>ref|XP_002525033.1| conserved hypothetical protein [Ricinus communis]
gi|223535695|gb|EEF37360.1| conserved hypothetical
protein [Ricinus communis]
Length = 203
Score = 204 bits (518), Expect = 5e-50
Identities = 114/211 (54%), Positives = 143/211 (67%), Gaps = 4/211 (1%)
Frame = +2
Query: 17 EKGGKGFSLPKNG-KSALKS--PAS-KGKDDSLAKSKRGRKVQFDSEGSLDTNSTQSNGK 184
EKGGKGFSLP G KS+LKS PAS KGKDD+ AKSKRG+KVQF+S+G++ GK
Sbjct: 2 EKGGKGFSLPGKGLKSSLKSITPASTKGKDDTSAKSKRGKKVQFNSQGNMS-----KGGK 56
Query: 185 ADTPXXXXXXXXXXXXXXXXXXXXXXXAREPGPLELRVEQELPDNTICLMDCEVADILQG 364
D +EP PLEL++EQ+LP N CLMDCE A +LQG
Sbjct: 57 GDK---------------VSNGVKISSTKEPQPLELKIEQDLPKNAKCLMDCEAAQVLQG 101
Query: 365 IQEQMVILSEDPAIKLPVSFDRGLTYAQRNKLYDDPQAVKQILKSLKVHGVSDGELCMIV 544
IQEQMV+LS DP IKLPVSFDR L +A+ + +PQ+V++IL+ LK HGVS+GE+C I
Sbjct: 102 IQEQMVLLSRDPTIKLPVSFDRALQHARTGARFTNPQSVRRILEGLKKHGVSEGEICTIA 161
Query: 545 NFHVESVDEVFALVPSFKTKKSKLRVPLENV 637
N + VDEVFALVPS K+KK+ LR PL+++
Sbjct: 162 NVCPDGVDEVFALVPSLKSKKNVLREPLKDI 192
>gb|EMJ13140.1| hypothetical protein PRUPE_ppa010773mg [Prunus persica]
Length = 237
Score = 201 bits (510), Expect = 4e-49
Identities = 117/229 (51%), Positives = 145/229 (63%), Gaps = 20/229 (8%)
Frame = +2
Query: 11 MAEKGGKGFSLP--KNGKSALKSPAS------------------KGKDDSLAKSKRGRKV 130
M+EKGGKGFSLP K KS+LKS S KGKDDS KSK+GRKV
Sbjct: 1 MSEKGGKGFSLPTGKAVKSSLKSTPSTKDGLLFLRSLLFLTSSLKGKDDSSTKSKKGRKV 60
Query: 131 QFDSEGSLDTNSTQSNGKADTPXXXXXXXXXXXXXXXXXXXXXXXAREPGPLELRVEQEL 310
QFDSEG + S S+ K D P +EP PLEL++EQEL
Sbjct: 61 QFDSEGLHEPKSNFSS-KFDNPAAASGKDWGKGGKGDKVGNGRK--KEPQPLELKIEQEL 117
Query: 311 PDNTICLMDCEVADILQGIQEQMVILSEDPAIKLPVSFDRGLTYAQRNKLYDDPQAVKQI 490
P + CLMDCE ADILQGIQEQM++LS+DP IK+PVSFD+GL YA+R Y +PQ+V+++
Sbjct: 118 PQSAKCLMDCEAADILQGIQEQMILLSKDPTIKIPVSFDKGLQYAKRTSHYTNPQSVRKV 177
Query: 491 LKSLKVHGVSDGELCMIVNFHVESVDEVFALVPSFKTKKSKLRVPLENV 637
L++L +GVSDGE+ +I N E+ DEVFALVPS KT +S L PL+ V
Sbjct: 178 LETLTKYGVSDGEISVIANVCPETTDEVFALVPSLKTTRSVLSQPLKEV 226
>ref|XP_006467223.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 4-like
isoform X2 [Citrus sinensis]
Length = 225
Score = 191 bits (484), Expect = 4e-46
Identities = 107/210 (50%), Positives = 139/210 (66%), Gaps = 5/210 (2%)
Frame = +2
Query: 23 GGKGFSLPKNGKSALKS-PASKG-KDDSLAKSKRGRKVQFDSEGSLD---TNSTQSNGKA 187
GGKG + GK++LKS PAS G KDD+ AKSKRGRKVQF++EG + T S++S+GK
Sbjct: 6 GGKGGGVGGGGKTSLKSIPASLGGKDDNSAKSKRGRKVQFNTEGLSEGKFTFSSKSDGKF 65
Query: 188 DTPXXXXXXXXXXXXXXXXXXXXXXXAREPGPLELRVEQELPDNTICLMDCEVADILQGI 367
+T +E PLELRVEQELP N CLMDCE A IL+GI
Sbjct: 66 ETTYGKGGLTKGGKGDKVANGAKVSVVKEALPLELRVEQELPKNAKCLMDCEAAHILEGI 125
Query: 368 QEQMVILSEDPAIKLPVSFDRGLTYAQRNKLYDDPQAVKQILKSLKVHGVSDGELCMIVN 547
QEQM +LS DP IK+PVSFD+GL YA+ + + +PQAVK + +SL HGV+DGE+C+I N
Sbjct: 126 QEQMALLSADPTIKIPVSFDKGLLYAKTHSHFTNPQAVKGLFQSLSEHGVTDGEICVIAN 185
Query: 548 FHVESVDEVFALVPSFKTKKSKLRVPLENV 637
E+V+E +A+VPS K K+S+L L+ V
Sbjct: 186 ICPETVEEAYAIVPSLKAKRSRLNDLLKEV 215
>gb|EOY29035.1| DNA-directed RNA polymerase II subunit rpb4, putative isoform 1
[Theobroma cacao] gi|508781780|gb|EOY29036.1|
DNA-directed RNA polymerase II subunit rpb4, putative
isoform 1 [Theobroma cacao]
Length = 231
Score = 191 bits (484), Expect = 4e-46
Identities = 114/220 (51%), Positives = 142/220 (64%), Gaps = 11/220 (5%)
Frame = +2
Query: 11 MAEKGGKGFSLPKNG--KSALKS-PASK----GKDDSLAKSKRGRKVQFDSEG----SLD 157
M+EKGGKGFSLP KSALKS PAS GKDD+ AKSKRGRKVQF EG +
Sbjct: 1 MSEKGGKGFSLPTKTTPKSALKSTPASATARHGKDDNSAKSKRGRKVQFGMEGLPNLGFN 60
Query: 158 TNSTQSNGKADTPXXXXXXXXXXXXXXXXXXXXXXXAREPGPLELRVEQELPDNTICLMD 337
+S +S+GK P A+E LELRVEQELP+N CLMD
Sbjct: 61 FSSPKSDGKFAIPVGKGDWAKGGKGEKVVNGGKAPVAKEAKSLELRVEQELPENVKCLMD 120
Query: 338 CEVADILQGIQEQMVILSEDPAIKLPVSFDRGLTYAQRNKLYDDPQAVKQILKSLKVHGV 517
CE A+IL+GIQEQMV+LS+D IKLP SF GL YA+ Y +PQ+V+++L++L +GV
Sbjct: 121 CEAANILEGIQEQMVMLSQDSTIKLPESFHLGLQYAKTRSYYTNPQSVRRVLEALSKYGV 180
Query: 518 SDGELCMIVNFHVESVDEVFALVPSFKTKKSKLRVPLENV 637
S E+C+I N E+VDEVFALV S + KKS+L PL++V
Sbjct: 181 SYSEICVIANTCPETVDEVFALVRSLEAKKSRLSEPLKDV 220
>ref|XP_006449991.1| hypothetical protein CICLE_v10016499mg [Citrus clementina]
gi|557552602|gb|ESR63231.1| hypothetical protein
CICLE_v10016499mg [Citrus clementina]
Length = 225
Score = 189 bits (480), Expect = 1e-45
Identities = 106/210 (50%), Positives = 138/210 (65%), Gaps = 5/210 (2%)
Frame = +2
Query: 23 GGKGFSLPKNGKSALKS-PASKG-KDDSLAKSKRGRKVQFDSEGSLD---TNSTQSNGKA 187
GGKG + GK++LKS P S G KDD+ AKSKRGRKVQF++EG + T S++S+GK
Sbjct: 6 GGKGGGVGGGGKTSLKSIPTSLGGKDDNSAKSKRGRKVQFNTEGLSEGKFTFSSKSDGKF 65
Query: 188 DTPXXXXXXXXXXXXXXXXXXXXXXXAREPGPLELRVEQELPDNTICLMDCEVADILQGI 367
+T +E PLELRVEQELP N CLMDCE A IL+GI
Sbjct: 66 ETTCGKGGLTKGGKGDKVANGAKVSVVKEALPLELRVEQELPKNAKCLMDCEAAHILEGI 125
Query: 368 QEQMVILSEDPAIKLPVSFDRGLTYAQRNKLYDDPQAVKQILKSLKVHGVSDGELCMIVN 547
QEQM +LS DP IK+PVSFD+GL YA+ + + +PQAVK + +SL HGV+DGE+C+I N
Sbjct: 126 QEQMALLSADPTIKIPVSFDKGLLYAKTHSHFTNPQAVKGLFQSLSEHGVTDGEICVIAN 185
Query: 548 FHVESVDEVFALVPSFKTKKSKLRVPLENV 637
E+V+E +A+VPS K K+S+L L+ V
Sbjct: 186 ICPETVEEAYAIVPSLKAKRSRLNDLLKEV 215
>ref|XP_004158834.1| PREDICTED: DNA-directed RNA polymerase II subunit rpb4-like
[Cucumis sativus]
Length = 220
Score = 188 bits (477), Expect = 3e-45
Identities = 107/220 (48%), Positives = 140/220 (63%), Gaps = 11/220 (5%)
Frame = +2
Query: 11 MAEKGGKGFSLPKNG------KSALKSPASKGKDDSLAKSKRGRKVQFDSEGSLDTNSTQ 172
M+EKG KGFS+ K SALK + KGKDDSL+K K+GRKVQFD++GS+D +T
Sbjct: 1 MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDATNTF 60
Query: 173 S---NGKADTPXXXXXXXXXXXXXXXXXXXXXXXAREPGPLELRVEQELPDNTIC--LMD 337
S +GK A+EP LEL++EQELP N C LMD
Sbjct: 61 SMKYSGK----------NGDLGKGGKGANTKASIAKEPQALELKIEQELPKNVKCQCLMD 110
Query: 338 CEVADILQGIQEQMVILSEDPAIKLPVSFDRGLTYAQRNKLYDDPQAVKQILKSLKVHGV 517
CE A +LQGIQ+QMV LS DP IK+P SFDRGL YA+R Y + ++V+ +L++LK +GV
Sbjct: 111 CEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGV 170
Query: 518 SDGELCMIVNFHVESVDEVFALVPSFKTKKSKLRVPLENV 637
+D E+C+I N ++ DEVFAL+PS K K+SKL P+ NV
Sbjct: 171 TDSEICVIANVCPDTTDEVFALLPSLKRKRSKLSEPINNV 210
>ref|XP_004134991.1| PREDICTED: uncharacterized protein LOC101213971 [Cucumis sativus]
Length = 242
Score = 188 bits (477), Expect = 3e-45
Identities = 107/220 (48%), Positives = 140/220 (63%), Gaps = 11/220 (5%)
Frame = +2
Query: 11 MAEKGGKGFSLPKNG------KSALKSPASKGKDDSLAKSKRGRKVQFDSEGSLDTNSTQ 172
M+EKG KGFS+ K SALK + KGKDDSL+K K+GRKVQFD++GS+D +T
Sbjct: 1 MSEKGEKGFSVQKRPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDATNTF 60
Query: 173 S---NGKADTPXXXXXXXXXXXXXXXXXXXXXXXAREPGPLELRVEQELPDNTIC--LMD 337
S +GK A+EP LEL++EQELP N C LMD
Sbjct: 61 SMKYSGK----------NGDLGKGGKGANTKASIAKEPQALELKIEQELPKNVKCQCLMD 110
Query: 338 CEVADILQGIQEQMVILSEDPAIKLPVSFDRGLTYAQRNKLYDDPQAVKQILKSLKVHGV 517
CE A +LQGIQ+QMV LS DP IK+P SFDRGL YA+R Y + ++V+ +L++LK +GV
Sbjct: 111 CEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGV 170
Query: 518 SDGELCMIVNFHVESVDEVFALVPSFKTKKSKLRVPLENV 637
+D E+C+I N ++ DEVFAL+PS K K+SKL P+ NV
Sbjct: 171 TDSEICVIANVCPDTTDEVFALLPSLKRKRSKLSEPINNV 210
>ref|XP_002329936.1| predicted protein [Populus trichocarpa]
gi|566207919|ref|XP_006373571.1| hypothetical protein
POPTR_0016s00490g [Populus trichocarpa]
gi|550320481|gb|ERP51368.1| hypothetical protein
POPTR_0016s00490g [Populus trichocarpa]
Length = 197
Score = 184 bits (468), Expect = 3e-44
Identities = 103/210 (49%), Positives = 134/210 (63%), Gaps = 1/210 (0%)
Frame = +2
Query: 11 MAEKGGKGFSLP-KNGKSALKSPASKGKDDSLAKSKRGRKVQFDSEGSLDTNSTQSNGKA 187
M + GGKGFSLP K KS+LKS ++KGKDDS GRK+ F+SEG+L GK
Sbjct: 1 MEKGGGKGFSLPSKEPKSSLKSSSTKGKDDS----NNGRKIHFESEGNLSKGG--KGGKI 54
Query: 188 DTPXXXXXXXXXXXXXXXXXXXXXXXAREPGPLELRVEQELPDNTICLMDCEVADILQGI 367
+EP PLEL++E ELP N LMDCE A ILQGI
Sbjct: 55 AN------------------GGKSPMTKEPPPLELKIESELPQNAKPLMDCEAAQILQGI 96
Query: 368 QEQMVILSEDPAIKLPVSFDRGLTYAQRNKLYDDPQAVKQILKSLKVHGVSDGELCMIVN 547
Q+QMV+LS+DP IKLPVSFD+GL YA+ Y +PQ+V+++L++L+ +GVSDGE+ +I N
Sbjct: 97 QDQMVLLSQDPTIKLPVSFDKGLQYAKNGAHYTNPQSVRRVLEALRKYGVSDGEISLIAN 156
Query: 548 FHVESVDEVFALVPSFKTKKSKLRVPLENV 637
E+ DE FALVPS K+K S LR PL+++
Sbjct: 157 VFPETADEAFALVPSLKSKASTLREPLKDI 186
>ref|XP_004293416.1| PREDICTED: uncharacterized protein LOC101305540 [Fragaria vesca
subsp. vesca]
Length = 196
Score = 184 bits (466), Expect = 5e-44
Identities = 97/215 (45%), Positives = 136/215 (63%), Gaps = 6/215 (2%)
Frame = +2
Query: 11 MAEKGGKGFSLP-----KNGKSALKSPASKGKDDSLAKSKRGRKVQFDSEGSLDTNSTQS 175
M++KGGKGF+ K GKS+LK KGKDD AKSK+ R VQF S+ + T +
Sbjct: 1 MSDKGGKGFTAVPKGKGKGGKSSLKEATPKGKDDGPAKSKKTRNVQFSSQAAASTKANSG 60
Query: 176 NG-KADTPXXXXXXXXXXXXXXXXXXXXXXXAREPGPLELRVEQELPDNTICLMDCEVAD 352
G +AD ++ PL+L++E ELP CLMDCE AD
Sbjct: 61 KGGQAD----------------------GGAKKDKEPLQLKLENELPKGAKCLMDCEAAD 98
Query: 353 ILQGIQEQMVILSEDPAIKLPVSFDRGLTYAQRNKLYDDPQAVKQILKSLKVHGVSDGEL 532
ILQG+Q+ MVILS+DP+IKLPVSFDR L Y +++ Y DP++V+Q+L++LK +GV+DGE+
Sbjct: 99 ILQGVQDHMVILSKDPSIKLPVSFDRALQYTEKSTNYTDPESVRQVLQNLKTYGVTDGEI 158
Query: 533 CMIVNFHVESVDEVFALVPSFKTKKSKLRVPLENV 637
C++ N + E+ DEVFAL+PS K ++ L P+ +V
Sbjct: 159 CVMANVYPETADEVFALLPSLKARRIMLDDPVNDV 193
>ref|XP_006467222.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 4-like
isoform X1 [Citrus sinensis]
Length = 237
Score = 183 bits (464), Expect = 9e-44
Identities = 102/197 (51%), Positives = 131/197 (66%), Gaps = 5/197 (2%)
Frame = +2
Query: 23 GGKGFSLPKNGKSALKS-PASKG-KDDSLAKSKRGRKVQFDSEGSLD---TNSTQSNGKA 187
GGKG + GK++LKS PAS G KDD+ AKSKRGRKVQF++EG + T S++S+GK
Sbjct: 6 GGKGGGVGGGGKTSLKSIPASLGGKDDNSAKSKRGRKVQFNTEGLSEGKFTFSSKSDGKF 65
Query: 188 DTPXXXXXXXXXXXXXXXXXXXXXXXAREPGPLELRVEQELPDNTICLMDCEVADILQGI 367
+T +E PLELRVEQELP N CLMDCE A IL+GI
Sbjct: 66 ETTYGKGGLTKGGKGDKVANGAKVSVVKEALPLELRVEQELPKNAKCLMDCEAAHILEGI 125
Query: 368 QEQMVILSEDPAIKLPVSFDRGLTYAQRNKLYDDPQAVKQILKSLKVHGVSDGELCMIVN 547
QEQM +LS DP IK+PVSFD+GL YA+ + + +PQAVK + +SL HGV+DGE+C+I N
Sbjct: 126 QEQMALLSADPTIKIPVSFDKGLLYAKTHSHFTNPQAVKGLFQSLSEHGVTDGEICVIAN 185
Query: 548 FHVESVDEVFALVPSFK 598
E+V+E +A+VPS K
Sbjct: 186 ICPETVEEAYAIVPSLK 202
>gb|EOY29037.1| DNA-directed RNA polymerase II subunit rpb4, putative isoform 3,
partial [Theobroma cacao]
Length = 214
Score = 182 bits (462), Expect = 2e-43
Identities = 108/214 (50%), Positives = 135/214 (63%), Gaps = 9/214 (4%)
Frame = +2
Query: 11 MAEKGGKGFSLPKNG--KSALKSP---ASKGKDDSLAKSKRGRKVQFDSEG----SLDTN 163
M+EKGGKGFSLP KSALKS A+ DD+ AKSKRGRKVQF EG + +
Sbjct: 1 MSEKGGKGFSLPTKTTPKSALKSTPASATARHDDNSAKSKRGRKVQFGMEGLPNLGFNFS 60
Query: 164 STQSNGKADTPXXXXXXXXXXXXXXXXXXXXXXXAREPGPLELRVEQELPDNTICLMDCE 343
S +S+GK P A+E LELRVEQELP+N CLMDCE
Sbjct: 61 SPKSDGKFAIPVGKGDWAKGGKGEKVVNGGKAPVAKEAKSLELRVEQELPENVKCLMDCE 120
Query: 344 VADILQGIQEQMVILSEDPAIKLPVSFDRGLTYAQRNKLYDDPQAVKQILKSLKVHGVSD 523
A+IL+GIQEQMV+LS+D IKLP SF GL YA+ Y +PQ+V+++L++L +GVS
Sbjct: 121 AANILEGIQEQMVMLSQDSTIKLPESFHLGLQYAKTRSYYTNPQSVRRVLEALSKYGVSY 180
Query: 524 GELCMIVNFHVESVDEVFALVPSFKTKKSKLRVP 625
E+C+I N E+VDEVFALV S + KKS+L P
Sbjct: 181 SEICVIANTCPETVDEVFALVRSLEAKKSRLSEP 214
>ref|XP_006449990.1| hypothetical protein CICLE_v10016499mg [Citrus clementina]
gi|557552601|gb|ESR63230.1| hypothetical protein
CICLE_v10016499mg [Citrus clementina]
Length = 237
Score = 181 bits (460), Expect = 3e-43
Identities = 101/197 (51%), Positives = 130/197 (65%), Gaps = 5/197 (2%)
Frame = +2
Query: 23 GGKGFSLPKNGKSALKS-PASKG-KDDSLAKSKRGRKVQFDSEGSLD---TNSTQSNGKA 187
GGKG + GK++LKS P S G KDD+ AKSKRGRKVQF++EG + T S++S+GK
Sbjct: 6 GGKGGGVGGGGKTSLKSIPTSLGGKDDNSAKSKRGRKVQFNTEGLSEGKFTFSSKSDGKF 65
Query: 188 DTPXXXXXXXXXXXXXXXXXXXXXXXAREPGPLELRVEQELPDNTICLMDCEVADILQGI 367
+T +E PLELRVEQELP N CLMDCE A IL+GI
Sbjct: 66 ETTCGKGGLTKGGKGDKVANGAKVSVVKEALPLELRVEQELPKNAKCLMDCEAAHILEGI 125
Query: 368 QEQMVILSEDPAIKLPVSFDRGLTYAQRNKLYDDPQAVKQILKSLKVHGVSDGELCMIVN 547
QEQM +LS DP IK+PVSFD+GL YA+ + + +PQAVK + +SL HGV+DGE+C+I N
Sbjct: 126 QEQMALLSADPTIKIPVSFDKGLLYAKTHSHFTNPQAVKGLFQSLSEHGVTDGEICVIAN 185
Query: 548 FHVESVDEVFALVPSFK 598
E+V+E +A+VPS K
Sbjct: 186 ICPETVEEAYAIVPSLK 202
>ref|XP_006398486.1| hypothetical protein EUTSA_v10001026mg [Eutrema salsugineum]
gi|557099575|gb|ESQ39939.1| hypothetical protein
EUTSA_v10001026mg [Eutrema salsugineum]
Length = 208
Score = 181 bits (460), Expect = 3e-43
Identities = 102/209 (48%), Positives = 129/209 (61%), Gaps = 2/209 (0%)
Frame = +2
Query: 11 MAEKGGKGFSLPKNGKSALKSPAS--KGKDDSLAKSKRGRKVQFDSEGSLDTNSTQSNGK 184
M+EKGGKG KS+LKSP+ GKDD+ KSK+ RKVQFD G+ D S K
Sbjct: 1 MSEKGGKGI------KSSLKSPSKYGSGKDDNSTKSKKTRKVQFDPLGTSD-----SKYK 49
Query: 185 ADTPXXXXXXXXXXXXXXXXXXXXXXXAREPGPLELRVEQELPDNTICLMDCEVADILQG 364
++E PLEL+ E+ELP+N CLMDCE IL+G
Sbjct: 50 IVQDSDYQFQGSSAKGGKGTNAKKITRSKESQPLELKTEKELPENAKCLMDCEAFQILEG 109
Query: 365 IQEQMVILSEDPAIKLPVSFDRGLTYAQRNKLYDDPQAVKQILKSLKVHGVSDGELCMIV 544
I+EQ+ +LS+DP+IK+PVSF+RGL Y + Y +PQ+ +QIL+ LK HGVS+GELCMI
Sbjct: 110 IKEQLAVLSDDPSIKIPVSFNRGLEYLKLGSCYTNPQSARQILEPLKKHGVSEGELCMIA 169
Query: 545 NFHVESVDEVFALVPSFKTKKSKLRVPLE 631
N ES+DEVFA VPS K KK K+ PLE
Sbjct: 170 NVCPESIDEVFAFVPSMKGKKDKISQPLE 198
>gb|EXB64613.1| Calcineurin B-like protein 3 [Morus notabilis]
Length = 500
Score = 161 bits (408), Expect = 3e-37
Identities = 100/221 (45%), Positives = 129/221 (58%), Gaps = 10/221 (4%)
Frame = +2
Query: 5 ITMAEKGGKGFSLP--KNGKSALKSPASK-----GKDDSLAKSKRGRKVQFDSEGSLDTN 163
+ M +K GK F++P K KS+LKS + K GKDDS AKSK+GRKVQFD+ G +
Sbjct: 231 VAMGDKAGKNFTMPQKKGVKSSLKSSSGKEGTLKGKDDSSAKSKKGRKVQFDA-GVAEPK 289
Query: 164 STQSN---GKADTPXXXXXXXXXXXXXXXXXXXXXXXAREPGPLELRVEQELPDNTICLM 334
S S+ GK DTP + P PLELR+E ELP N CL+
Sbjct: 290 SNFSSKYGGKGDTPTAFPKGKGDRLFNSGKSSVP----KTPQPLELRIEDELPKNVKCLL 345
Query: 335 DCEVADILQGIQEQMVILSEDPAIKLPVSFDRGLTYAQRNKLYDDPQAVKQILKSLKVHG 514
CE A+ILQGIQE MV LS+DP IK PVSFDRGL YA+R Y + +++++L+
Sbjct: 346 ACEAAEILQGIQEHMVFLSKDPTIKTPVSFDRGLQYAKRGSHYTNALSIRKVLE------ 399
Query: 515 VSDGELCMIVNFHVESVDEVFALVPSFKTKKSKLRVPLENV 637
+C+I + E+ DEVFALVPS K KS LR P++ V
Sbjct: 400 YPQFIICIIADVCPETADEVFALVPSLKANKSLLREPVKKV 440
>ref|XP_003594343.1| DNA-directed RNA polymerase II subunit rpb4 [Medicago truncatula]
gi|124360902|gb|ABN08874.1| RNA polymerase Rpb4
[Medicago truncatula] gi|355483391|gb|AES64594.1|
DNA-directed RNA polymerase II subunit rpb4 [Medicago
truncatula]
Length = 223
Score = 155 bits (391), Expect = 3e-35
Identities = 93/213 (43%), Positives = 125/213 (58%), Gaps = 4/213 (1%)
Frame = +2
Query: 5 ITMAEKGGKGFSLPKNGKSALKSPASKGKDDSLAKSKRGRKVQFDSEGSLDT--NSTQSN 178
+TM++KGGKG SL G KGKDDS KS + RKVQF SEG ++ N S
Sbjct: 20 LTMSDKGGKGGSLLSKGGGL------KGKDDSATKSAKARKVQF-SEGLFESRSNGPTSG 72
Query: 179 GKADTPXXXXXXXXXXXXXXXXXXXXXXXAREPGPLELRVEQELPDNTICLMDCEVADIL 358
GK D A++P E RV+QELP+N CLMDCE A +L
Sbjct: 73 GKGDK---------------VANGGKSSAAKDPHQFEHRVDQELPENFKCLMDCEAAVML 117
Query: 359 QGIQEQMVILSEDPAIKLPVSFDRGLTYAQ--RNKLYDDPQAVKQILKSLKVHGVSDGEL 532
QGIQ+QMV LS DP+IK+P SFD+GL YA+ + Y +P++V+ L+ L H +++ E+
Sbjct: 118 QGIQDQMVALSRDPSIKMPASFDKGLYYAKSSSSSKYSNPESVRHTLEPLMNHDLTESEI 177
Query: 533 CMIVNFHVESVDEVFALVPSFKTKKSKLRVPLE 631
C+I N E+ DEVFAL+PS K+K+ P+E
Sbjct: 178 CVIANVCPETADEVFALLPSLKSKRGINSQPVE 210
>gb|EOY29038.1| DNA-directed RNA polymerase II subunit rpb4, putative isoform 4,
partial [Theobroma cacao]
Length = 182
Score = 153 bits (387), Expect = 8e-35
Identities = 93/181 (51%), Positives = 114/181 (62%), Gaps = 11/181 (6%)
Frame = +2
Query: 11 MAEKGGKGFSLPKNG--KSALKS-PASK----GKDDSLAKSKRGRKVQFDSEG----SLD 157
M+EKGGKGFSLP KSALKS PAS GKDD+ AKSKRGRKVQF EG +
Sbjct: 1 MSEKGGKGFSLPTKTTPKSALKSTPASATARHGKDDNSAKSKRGRKVQFGMEGLPNLGFN 60
Query: 158 TNSTQSNGKADTPXXXXXXXXXXXXXXXXXXXXXXXAREPGPLELRVEQELPDNTICLMD 337
+S +S+GK P A+E LELRVEQELP+N CLMD
Sbjct: 61 FSSPKSDGKFAIPVGKGDWAKGGKGEKVVNGGKAPVAKEAKSLELRVEQELPENVKCLMD 120
Query: 338 CEVADILQGIQEQMVILSEDPAIKLPVSFDRGLTYAQRNKLYDDPQAVKQILKSLKVHGV 517
CE A+IL+GIQEQMV+LS+D IKLP SF GL YA+ Y +PQ+V+++L++L +GV
Sbjct: 121 CEAANILEGIQEQMVMLSQDSTIKLPESFHLGLQYAKTRSYYTNPQSVRRVLEALSKYGV 180
Query: 518 S 520
S
Sbjct: 181 S 181