BLASTX nr result

ID: Atropa21_contig00002353 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00002353
         (460 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001233985.1| histone H1 [Solanum lycopersicum] gi|3021487...   109   4e-22
ref|XP_006352751.1| PREDICTED: histone H1-like [Solanum tuberosum]    108   1e-21
gb|AAC41651.1| histone H1 [Nicotiana tabacum]                         105   5e-21
dbj|BAA88671.1| histone H1 [Nicotiana tabacum]                        105   5e-21
gb|EOY11039.1| Winged-helix DNA-binding transcription factor fam...    99   6e-19
gb|AAP31307.1| histone H1 [Lens nigricans]                             99   6e-19
gb|AAM54670.1|AF514416_1 histone H1 [Lathyrus aphaca]                  99   6e-19
gb|AAK29456.1|AF352253_1 histone H1 [Lens culinaris]                   99   6e-19
gb|AAK29455.1|AF352252_1 histone H1 [Lens culinaris]                   99   6e-19
gb|AAK29454.1|AF352251_1 histone H1 [Lens culinaris]                   99   6e-19
gb|AAK29452.1|AF352249_1 histone H1 [Lathyrus sativus]                 98   1e-18
gb|AAK29453.1|AF352250_1 histone H1 [Lathyrus sativus]                 98   1e-18
gb|EOX94551.1| Winged-helix DNA-binding transcription factor fam...    97   2e-18
gb|AAM54671.1|AF514417_1 histone H1 [Pisum abyssinicum] gi|21465...    97   3e-18
gb|AAK29449.1|AF352246_1 histone H1 [Pisum sativum]                    97   3e-18
gb|AAK29450.1|AF352247_1 histone H1 [Pisum sativum]                    97   3e-18
gb|EXB81317.1| Histone [Morus notabilis]                               96   4e-18
ref|XP_004247225.1| PREDICTED: histone H1-like [Solanum lycopers...    96   4e-18
ref|XP_006351636.1| PREDICTED: histone H1-like [Solanum tuberosum]     96   5e-18
dbj|BAA78535.1| ribosome-sedimenting protein [Pisum sativum]           96   6e-18

>ref|NP_001233985.1| histone H1 [Solanum lycopersicum] gi|3021487|emb|CAA12232.1|
           histone H1 [Solanum lycopersicum]
          Length = 271

 Score =  109 bits (272), Expect = 4e-22
 Identities = 56/62 (90%), Positives = 60/62 (96%)
 Frame = -3

Query: 458 IQEAIVTLKDKTGSSQYAITKFIEDKQKHLSSNFRKLLLGQLKKLVASGKLVKVKSSYKL 279
           I+EAIVTLKDKTGSSQYAITKFIEDKQK+L SNFRK+LL QLKKLVASGKLVKVKSSYKL
Sbjct: 64  IKEAIVTLKDKTGSSQYAITKFIEDKQKNLPSNFRKMLLAQLKKLVASGKLVKVKSSYKL 123

Query: 278 PS 273
           P+
Sbjct: 124 PA 125


>ref|XP_006352751.1| PREDICTED: histone H1-like [Solanum tuberosum]
          Length = 273

 Score =  108 bits (269), Expect = 1e-21
 Identities = 56/62 (90%), Positives = 60/62 (96%)
 Frame = -3

Query: 458 IQEAIVTLKDKTGSSQYAITKFIEDKQKHLSSNFRKLLLGQLKKLVASGKLVKVKSSYKL 279
           I+EAIVTLKDKTGSSQYAITKFIEDKQK+L SNFRK+LL QLKKLVASGKLVKVKSSYKL
Sbjct: 64  IKEAIVTLKDKTGSSQYAITKFIEDKQKNLPSNFRKMLLVQLKKLVASGKLVKVKSSYKL 123

Query: 278 PS 273
           P+
Sbjct: 124 PA 125


>gb|AAC41651.1| histone H1 [Nicotiana tabacum]
          Length = 282

 Score =  105 bits (263), Expect = 5e-21
 Identities = 55/62 (88%), Positives = 60/62 (96%)
 Frame = -3

Query: 458 IQEAIVTLKDKTGSSQYAITKFIEDKQKHLSSNFRKLLLGQLKKLVASGKLVKVKSSYKL 279
           I++AIVTLKDKTGSSQ+AITKFIEDKQK+L SNFRKLLL QLKKLVASGKLVKVKSSYKL
Sbjct: 66  IKDAIVTLKDKTGSSQHAITKFIEDKQKNLPSNFRKLLLVQLKKLVASGKLVKVKSSYKL 125

Query: 278 PS 273
           P+
Sbjct: 126 PA 127


>dbj|BAA88671.1| histone H1 [Nicotiana tabacum]
          Length = 279

 Score =  105 bits (263), Expect = 5e-21
 Identities = 55/62 (88%), Positives = 60/62 (96%)
 Frame = -3

Query: 458 IQEAIVTLKDKTGSSQYAITKFIEDKQKHLSSNFRKLLLGQLKKLVASGKLVKVKSSYKL 279
           I++AIVTLKDKTGSSQ+AITKFIEDKQK+L SNFRKLLL QLKKLVASGKLVKVKSSYKL
Sbjct: 66  IKDAIVTLKDKTGSSQHAITKFIEDKQKNLPSNFRKLLLVQLKKLVASGKLVKVKSSYKL 125

Query: 278 PS 273
           P+
Sbjct: 126 PA 127


>gb|EOY11039.1| Winged-helix DNA-binding transcription factor family protein
           [Theobroma cacao]
          Length = 212

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 51/64 (79%), Positives = 56/64 (87%)
 Frame = -3

Query: 458 IQEAIVTLKDKTGSSQYAITKFIEDKQKHLSSNFRKLLLGQLKKLVASGKLVKVKSSYKL 279
           I +AIVTLK+KTGSSQYAITKFIE+K K L SNFRKLLL Q+KK VASGKLVKVK+SYKL
Sbjct: 36  ISDAIVTLKEKTGSSQYAITKFIEEKHKQLPSNFRKLLLVQMKKFVASGKLVKVKASYKL 95

Query: 278 PSKS 267
           P  S
Sbjct: 96  PPAS 99


>gb|AAP31307.1| histone H1 [Lens nigricans]
          Length = 293

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 49/64 (76%), Positives = 59/64 (92%)
 Frame = -3

Query: 458 IQEAIVTLKDKTGSSQYAITKFIEDKQKHLSSNFRKLLLGQLKKLVASGKLVKVKSSYKL 279
           +++AIV+LK+K GSSQYAI KFIE+KQK L SNF+KLLL Q+KKLVASGKLVKVK+SYKL
Sbjct: 63  VKDAIVSLKEKNGSSQYAIAKFIEEKQKQLPSNFKKLLLVQIKKLVASGKLVKVKASYKL 122

Query: 278 PSKS 267
           P+KS
Sbjct: 123 PAKS 126


>gb|AAM54670.1|AF514416_1 histone H1 [Lathyrus aphaca]
          Length = 298

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 50/64 (78%), Positives = 58/64 (90%)
 Frame = -3

Query: 458 IQEAIVTLKDKTGSSQYAITKFIEDKQKHLSSNFRKLLLGQLKKLVASGKLVKVKSSYKL 279
           ++EAIV LK+K+GSSQYAI KFIE+K K L SNF+KLLL QLKKLVASGKLVKVK+SYKL
Sbjct: 66  VKEAIVALKEKSGSSQYAIAKFIEEKHKQLPSNFKKLLLVQLKKLVASGKLVKVKASYKL 125

Query: 278 PSKS 267
           P+KS
Sbjct: 126 PAKS 129


>gb|AAK29456.1|AF352253_1 histone H1 [Lens culinaris]
          Length = 293

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 49/64 (76%), Positives = 59/64 (92%)
 Frame = -3

Query: 458 IQEAIVTLKDKTGSSQYAITKFIEDKQKHLSSNFRKLLLGQLKKLVASGKLVKVKSSYKL 279
           +++AIV+LK+K GSSQYAI KFIE+KQK L SNF+KLLL Q+KKLVASGKLVKVK+SYKL
Sbjct: 63  VKDAIVSLKEKNGSSQYAIAKFIEEKQKQLPSNFKKLLLVQIKKLVASGKLVKVKASYKL 122

Query: 278 PSKS 267
           P+KS
Sbjct: 123 PAKS 126


>gb|AAK29455.1|AF352252_1 histone H1 [Lens culinaris]
          Length = 293

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 49/64 (76%), Positives = 59/64 (92%)
 Frame = -3

Query: 458 IQEAIVTLKDKTGSSQYAITKFIEDKQKHLSSNFRKLLLGQLKKLVASGKLVKVKSSYKL 279
           +++AIV+LK+K GSSQYAI KFIE+KQK L SNF+KLLL Q+KKLVASGKLVKVK+SYKL
Sbjct: 63  VKDAIVSLKEKNGSSQYAIAKFIEEKQKQLPSNFKKLLLVQIKKLVASGKLVKVKASYKL 122

Query: 278 PSKS 267
           P+KS
Sbjct: 123 PAKS 126


>gb|AAK29454.1|AF352251_1 histone H1 [Lens culinaris]
          Length = 281

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 49/64 (76%), Positives = 59/64 (92%)
 Frame = -3

Query: 458 IQEAIVTLKDKTGSSQYAITKFIEDKQKHLSSNFRKLLLGQLKKLVASGKLVKVKSSYKL 279
           +++AIV+LK+K GSSQYAI KFIE+KQK L SNF+KLLL Q+KKLVASGKLVKVK+SYKL
Sbjct: 63  VKDAIVSLKEKNGSSQYAIAKFIEEKQKQLPSNFKKLLLVQIKKLVASGKLVKVKASYKL 122

Query: 278 PSKS 267
           P+KS
Sbjct: 123 PAKS 126


>gb|AAK29452.1|AF352249_1 histone H1 [Lathyrus sativus]
          Length = 295

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 49/64 (76%), Positives = 58/64 (90%)
 Frame = -3

Query: 458 IQEAIVTLKDKTGSSQYAITKFIEDKQKHLSSNFRKLLLGQLKKLVASGKLVKVKSSYKL 279
           ++EAIV LK+K+GSSQYAI KFIE+K K L SNF+KLLL Q+KKLVASGKLVKVK+SYKL
Sbjct: 63  VKEAIVALKEKSGSSQYAIAKFIEEKHKQLPSNFKKLLLVQIKKLVASGKLVKVKASYKL 122

Query: 278 PSKS 267
           P+KS
Sbjct: 123 PAKS 126


>gb|AAK29453.1|AF352250_1 histone H1 [Lathyrus sativus]
          Length = 306

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 49/64 (76%), Positives = 58/64 (90%)
 Frame = -3

Query: 458 IQEAIVTLKDKTGSSQYAITKFIEDKQKHLSSNFRKLLLGQLKKLVASGKLVKVKSSYKL 279
           ++EAIV LK+K+GSSQYAI KFIE+K K L SNF+KLLL Q+KKLVASGKLVKVK+SYKL
Sbjct: 74  VKEAIVALKEKSGSSQYAIAKFIEEKHKQLPSNFKKLLLVQIKKLVASGKLVKVKASYKL 133

Query: 278 PSKS 267
           P+KS
Sbjct: 134 PAKS 137


>gb|EOX94551.1| Winged-helix DNA-binding transcription factor family protein
           [Theobroma cacao]
          Length = 284

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 48/62 (77%), Positives = 57/62 (91%)
 Frame = -3

Query: 458 IQEAIVTLKDKTGSSQYAITKFIEDKQKHLSSNFRKLLLGQLKKLVASGKLVKVKSSYKL 279
           I++A+VTLK+KTGSSQYAITKFIE+KQKHL   F+KLLL  LKKLVA+GKLVKVK+S+KL
Sbjct: 63  IKDAVVTLKEKTGSSQYAITKFIEEKQKHLPGTFKKLLLFHLKKLVAAGKLVKVKNSFKL 122

Query: 278 PS 273
           PS
Sbjct: 123 PS 124


>gb|AAM54671.1|AF514417_1 histone H1 [Pisum abyssinicum] gi|21465097|gb|AAM54672.1|AF514418_1
           histone H1 [Pisum fulvum]
          Length = 295

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 48/64 (75%), Positives = 57/64 (89%)
 Frame = -3

Query: 458 IQEAIVTLKDKTGSSQYAITKFIEDKQKHLSSNFRKLLLGQLKKLVASGKLVKVKSSYKL 279
           ++EAIV LK++ GSSQYAI KFIE+K K L SNF+KLLL Q+KKLVASGKLVKVK+SYKL
Sbjct: 63  VKEAIVALKERNGSSQYAIAKFIEEKHKQLPSNFKKLLLVQIKKLVASGKLVKVKASYKL 122

Query: 278 PSKS 267
           P+KS
Sbjct: 123 PAKS 126


>gb|AAK29449.1|AF352246_1 histone H1 [Pisum sativum]
          Length = 296

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 48/64 (75%), Positives = 57/64 (89%)
 Frame = -3

Query: 458 IQEAIVTLKDKTGSSQYAITKFIEDKQKHLSSNFRKLLLGQLKKLVASGKLVKVKSSYKL 279
           ++EAIV LK++ GSSQYAI KFIE+K K L SNF+KLLL Q+KKLVASGKLVKVK+SYKL
Sbjct: 63  VKEAIVALKERNGSSQYAIAKFIEEKHKQLPSNFKKLLLVQIKKLVASGKLVKVKASYKL 122

Query: 278 PSKS 267
           P+KS
Sbjct: 123 PAKS 126


>gb|AAK29450.1|AF352247_1 histone H1 [Pisum sativum]
          Length = 290

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 48/64 (75%), Positives = 57/64 (89%)
 Frame = -3

Query: 458 IQEAIVTLKDKTGSSQYAITKFIEDKQKHLSSNFRKLLLGQLKKLVASGKLVKVKSSYKL 279
           ++EAIV LK++ GSSQYAI KFIE+K K L SNF+KLLL Q+KKLVASGKLVKVK+SYKL
Sbjct: 63  VKEAIVALKERNGSSQYAIAKFIEEKHKQLPSNFKKLLLVQIKKLVASGKLVKVKASYKL 122

Query: 278 PSKS 267
           P+KS
Sbjct: 123 PAKS 126


>gb|EXB81317.1| Histone [Morus notabilis]
          Length = 283

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 48/62 (77%), Positives = 57/62 (91%)
 Frame = -3

Query: 458 IQEAIVTLKDKTGSSQYAITKFIEDKQKHLSSNFRKLLLGQLKKLVASGKLVKVKSSYKL 279
           I++AIVTLK+KTGSSQ+AITKFIE+KQK+L  NFRKLLL  LKKLVA+GK++KVK SYKL
Sbjct: 65  IKDAIVTLKEKTGSSQHAITKFIEEKQKNLPPNFRKLLLFHLKKLVAAGKIIKVKGSYKL 124

Query: 278 PS 273
           PS
Sbjct: 125 PS 126


>ref|XP_004247225.1| PREDICTED: histone H1-like [Solanum lycopersicum]
           gi|585241|sp|P37218.1|H1_SOLLC RecName: Full=Histone H1
           gi|424100|gb|AAA50578.1| histone H1 [Solanum
           lycopersicum]
          Length = 287

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 50/64 (78%), Positives = 58/64 (90%)
 Frame = -3

Query: 458 IQEAIVTLKDKTGSSQYAITKFIEDKQKHLSSNFRKLLLGQLKKLVASGKLVKVKSSYKL 279
           I++AIVTLK++TGSSQ+AITKFIE+KQK L SNF+KLLL QLKK VAS KLVKVK+SYKL
Sbjct: 63  IKDAIVTLKERTGSSQHAITKFIEEKQKSLPSNFKKLLLTQLKKFVASEKLVKVKNSYKL 122

Query: 278 PSKS 267
           PS S
Sbjct: 123 PSGS 126


>ref|XP_006351636.1| PREDICTED: histone H1-like [Solanum tuberosum]
          Length = 283

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 50/64 (78%), Positives = 58/64 (90%)
 Frame = -3

Query: 458 IQEAIVTLKDKTGSSQYAITKFIEDKQKHLSSNFRKLLLGQLKKLVASGKLVKVKSSYKL 279
           I++AIVTLK++TGSSQYAITKFIE+KQK+L SNF+K LL QLKK VAS KLVKVK+SYKL
Sbjct: 63  IKDAIVTLKERTGSSQYAITKFIEEKQKNLPSNFKKSLLIQLKKFVASEKLVKVKNSYKL 122

Query: 278 PSKS 267
           PS S
Sbjct: 123 PSGS 126


>dbj|BAA78535.1| ribosome-sedimenting protein [Pisum sativum]
          Length = 297

 Score = 95.5 bits (236), Expect = 6e-18
 Identities = 47/64 (73%), Positives = 57/64 (89%)
 Frame = -3

Query: 458 IQEAIVTLKDKTGSSQYAITKFIEDKQKHLSSNFRKLLLGQLKKLVASGKLVKVKSSYKL 279
           ++EAIV LK++ GSSQYAI KFIE+K K L SNF+KLLL Q++KLVASGKLVKVK+SYKL
Sbjct: 65  VKEAIVALKERNGSSQYAIAKFIEEKHKQLPSNFKKLLLVQIRKLVASGKLVKVKASYKL 124

Query: 278 PSKS 267
           P+KS
Sbjct: 125 PAKS 128


Top