BLASTX nr result
ID: Atropa21_contig00001986
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00001986
(483 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006359092.1| PREDICTED: heterogeneous nuclear ribonucleop... 130 2e-28
ref|XP_004231546.1| PREDICTED: polyadenylate-binding protein 4-l... 120 1e-25
ref|XP_006485663.1| PREDICTED: heterogeneous nuclear ribonucleop... 65 7e-09
ref|XP_006451727.1| hypothetical protein CICLE_v10008394mg [Citr... 65 7e-09
ref|XP_004137219.1| PREDICTED: uncharacterized protein LOC101207... 65 9e-09
ref|XP_002285377.1| PREDICTED: uncharacterized protein LOC100248... 64 2e-08
gb|EMJ12722.1| hypothetical protein PRUPE_ppa008108mg [Prunus pe... 62 6e-08
ref|XP_002522563.1| Heterogeneous nuclear ribonucleoprotein A1, ... 59 7e-07
ref|XP_002300424.2| hypothetical protein POPTR_0001s38640g [Popu... 56 6e-06
gb|ESW05187.1| hypothetical protein PHAVU_011G159400g [Phaseolus... 55 7e-06
gb|AGV54510.1| polyadenylate-binding protein, cytoplasmic and nu... 55 7e-06
gb|AGV54416.1| polyadenylate-binding protein [Phaseolus vulgaris] 55 7e-06
>ref|XP_006359092.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like [Solanum
tuberosum]
Length = 424
Score = 130 bits (326), Expect = 2e-28
Identities = 83/170 (48%), Positives = 85/170 (50%), Gaps = 12/170 (7%)
Frame = -2
Query: 482 NMGPGGG-AVIPNTGGMPGGDDRI---PGSNYGVPVSXXXXXXXXXXXXXXXXXXXXXXX 315
NMG GG + GGMPG DDR+ PGSNYGVPVS
Sbjct: 257 NMGHGGAPGMNAGPGGMPG-DDRVGSMPGSNYGVPVSGLGPYSGFSGGPGPGMQQPPPQP 315
Query: 314 XGMVAHQNPHT--------IXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYRMP 159
MVAHQNPH YRMP
Sbjct: 316 G-MVAHQNPHLNSAIGGPGYGNQGPGSFTGGAGGYAGAGGYAGAGGYGGSSGDYSGYRMP 374
Query: 158 QSSAGMPSSGGYPDGGNYGLQSGYPSQVPQPGAGSRVLPGGMYQGMPPYY 9
QSSAGMPSSGGYPDGGNYGLQS YPSQVPQPGAGSRV PGGMYQGMPPYY
Sbjct: 375 QSSAGMPSSGGYPDGGNYGLQSSYPSQVPQPGAGSRVPPGGMYQGMPPYY 424
>ref|XP_004231546.1| PREDICTED: polyadenylate-binding protein 4-like isoform 1 [Solanum
lycopersicum] gi|460371445|ref|XP_004231547.1|
PREDICTED: polyadenylate-binding protein 4-like isoform
2 [Solanum lycopersicum]
gi|460371447|ref|XP_004231548.1| PREDICTED:
polyadenylate-binding protein 4-like isoform 3 [Solanum
lycopersicum] gi|460371449|ref|XP_004231549.1|
PREDICTED: polyadenylate-binding protein 4-like isoform
4 [Solanum lycopersicum]
Length = 424
Score = 120 bits (302), Expect = 1e-25
Identities = 80/171 (46%), Positives = 85/171 (49%), Gaps = 13/171 (7%)
Frame = -2
Query: 482 NMGPGGGAVIPNTG--GMPGGDDRI---PGSNYGVPVSXXXXXXXXXXXXXXXXXXXXXX 318
NMG GG + N G GMPG DDR+ PGSNYGVPVS
Sbjct: 257 NMGHGGAPGM-NAGLVGMPG-DDRVGSMPGSNYGVPVSGMGPYSGFSGGPGPGMQQPPPQ 314
Query: 317 XXGMVAHQNPHT--------IXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYRM 162
MVAHQNPH YRM
Sbjct: 315 PG-MVAHQNPHLNSAIGGPGYGNQGPGSFTGGAGGYAGAGGYAGAGGYGGNSGDYGGYRM 373
Query: 161 PQSSAGMPSSGGYPDGGNYGLQSGYPSQVPQPGAGSRVLPGGMYQGMPPYY 9
PQSSAGMPSSGG+PDGG+Y LQS YP+QVPQPGAGSRV PGGMYQGMPPYY
Sbjct: 374 PQSSAGMPSSGGFPDGGSYALQSAYPTQVPQPGAGSRVPPGGMYQGMPPYY 424
>ref|XP_006485663.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A1 homolog
isoform X1 [Citrus sinensis]
gi|568864564|ref|XP_006485664.1| PREDICTED:
heterogeneous nuclear ribonucleoproteins A1 homolog
isoform X2 [Citrus sinensis]
Length = 425
Score = 65.5 bits (158), Expect = 7e-09
Identities = 36/59 (61%), Positives = 40/59 (67%), Gaps = 6/59 (10%)
Frame = -2
Query: 167 RMPQSSAGMPSSGGYPDGGNYGLQS---GYPSQVPQPGAGS---RVLPGGMYQGMPPYY 9
R+P SSAGMPS GGYP+ G+YGL S GYPSQ Q S RV PGGMY +PPYY
Sbjct: 368 RLPPSSAGMPS-GGYPEAGHYGLSSTSAGYPSQHHQAAGTSPVPRVPPGGMYPNVPPYY 425
>ref|XP_006451727.1| hypothetical protein CICLE_v10008394mg [Citrus clementina]
gi|567919444|ref|XP_006451728.1| hypothetical protein
CICLE_v10008394mg [Citrus clementina]
gi|557554953|gb|ESR64967.1| hypothetical protein
CICLE_v10008394mg [Citrus clementina]
gi|557554954|gb|ESR64968.1| hypothetical protein
CICLE_v10008394mg [Citrus clementina]
Length = 425
Score = 65.5 bits (158), Expect = 7e-09
Identities = 36/59 (61%), Positives = 40/59 (67%), Gaps = 6/59 (10%)
Frame = -2
Query: 167 RMPQSSAGMPSSGGYPDGGNYGLQS---GYPSQVPQPGAGS---RVLPGGMYQGMPPYY 9
R+P SSAGMPS GGYP+ G+YGL S GYPSQ Q S RV PGGMY +PPYY
Sbjct: 368 RLPPSSAGMPS-GGYPEAGHYGLSSTSAGYPSQHHQAAGTSPVPRVPPGGMYPNVPPYY 425
>ref|XP_004137219.1| PREDICTED: uncharacterized protein LOC101207569 [Cucumis sativus]
gi|449483196|ref|XP_004156519.1| PREDICTED:
uncharacterized protein LOC101231665 [Cucumis sativus]
Length = 434
Score = 65.1 bits (157), Expect = 9e-09
Identities = 34/58 (58%), Positives = 40/58 (68%), Gaps = 5/58 (8%)
Frame = -2
Query: 167 RMPQSSAGMPSSGGYPDGGNYGLQS--GYPSQVPQPGAGS---RVLPGGMYQGMPPYY 9
R+PQSS GMPS GGYPD G+Y + S G+P+Q QP S RV PGGMY +PPYY
Sbjct: 378 RLPQSSVGMPS-GGYPDSGHYSMSSASGHPNQHHQPAGTSPAPRVPPGGMYPNVPPYY 434
>ref|XP_002285377.1| PREDICTED: uncharacterized protein LOC100248626 [Vitis vinifera]
gi|147789426|emb|CAN66609.1| hypothetical protein
VITISV_017556 [Vitis vinifera]
Length = 449
Score = 63.9 bits (154), Expect = 2e-08
Identities = 34/58 (58%), Positives = 38/58 (65%), Gaps = 5/58 (8%)
Frame = -2
Query: 167 RMPQSSAGMPSSGGYPDGGNYGLQSG--YPSQVPQPGAGS---RVLPGGMYQGMPPYY 9
R+P S+ GMPS GGYPD G+Y L S YPSQ+ QP S RV PGGMY PPYY
Sbjct: 393 RLPPSTVGMPS-GGYPDSGHYSLSSSSAYPSQIHQPAGTSPVPRVPPGGMYPSGPPYY 449
>gb|EMJ12722.1| hypothetical protein PRUPE_ppa008108mg [Prunus persica]
Length = 345
Score = 62.4 bits (150), Expect = 6e-08
Identities = 33/55 (60%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Frame = -2
Query: 167 RMPQSSAGMPSSGGYPDGGNYGLQS--GYPSQVPQPGAGSRVLPGGMYQGMPPYY 9
R+P SS GM GGY DG +YGL + G PSQ QP RV PGG+YQGMPPYY
Sbjct: 292 RLPPSSIGM-GHGGYSDGPHYGLGASMGLPSQHQQPPPVPRVPPGGLYQGMPPYY 345
>ref|XP_002522563.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis] gi|223538254|gb|EEF39863.1| Heterogeneous
nuclear ribonucleoprotein A1, putative [Ricinus
communis]
Length = 398
Score = 58.9 bits (141), Expect = 7e-07
Identities = 35/54 (64%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Frame = -2
Query: 167 RMPQSSAGMPSSGGYPDGGNYGLQSGYPSQVPQPGAG-SRVLPGGMYQGMPPYY 9
RM SS GM +SGGYPDG YGL SQ QP A RV PGGMYQGMPPYY
Sbjct: 351 RMNPSSGGM-ASGGYPDGAAYGL-----SQPHQPSALLPRVPPGGMYQGMPPYY 398
>ref|XP_002300424.2| hypothetical protein POPTR_0001s38640g [Populus trichocarpa]
gi|550349194|gb|EEE85229.2| hypothetical protein
POPTR_0001s38640g [Populus trichocarpa]
Length = 376
Score = 55.8 bits (133), Expect = 6e-06
Identities = 29/56 (51%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Frame = -2
Query: 167 RMPQSSAGMPSSGGYPDGGNYGLQSG---YPSQVPQPGAGSRVLPGGMYQGMPPYY 9
R+P SS GMP+ GGYPD G Y L S +PSQ RV GGMY +PPYY
Sbjct: 322 RLPPSSVGMPT-GGYPDPGQYSLSSSNASFPSQHQGASPAPRVPSGGMYPNLPPYY 376
>gb|ESW05187.1| hypothetical protein PHAVU_011G159400g [Phaseolus vulgaris]
Length = 438
Score = 55.5 bits (132), Expect = 7e-06
Identities = 29/58 (50%), Positives = 35/58 (60%), Gaps = 5/58 (8%)
Frame = -2
Query: 167 RMPQSSAGMPSSGGYPDGGNYGL--QSGYPSQVPQPGAGS---RVLPGGMYQGMPPYY 9
R+P S A S GGYP+GG+YGL +GY +Q P S RV PG MY +PPYY
Sbjct: 381 RLPGSGAMPASGGGYPEGGHYGLSASAGYQNQHHPPSGASPVPRVPPGSMYPNVPPYY 438
>gb|AGV54510.1| polyadenylate-binding protein, cytoplasmic and nuclear-like protein
[Phaseolus vulgaris]
Length = 437
Score = 55.5 bits (132), Expect = 7e-06
Identities = 29/58 (50%), Positives = 35/58 (60%), Gaps = 5/58 (8%)
Frame = -2
Query: 167 RMPQSSAGMPSSGGYPDGGNYGL--QSGYPSQVPQPGAGS---RVLPGGMYQGMPPYY 9
R+P S A S GGYP+GG+YGL +GY +Q P S RV PG MY +PPYY
Sbjct: 380 RLPGSGAMPASGGGYPEGGHYGLSASAGYQNQHHPPSGASPVPRVPPGSMYPNVPPYY 437
>gb|AGV54416.1| polyadenylate-binding protein [Phaseolus vulgaris]
Length = 438
Score = 55.5 bits (132), Expect = 7e-06
Identities = 29/58 (50%), Positives = 35/58 (60%), Gaps = 5/58 (8%)
Frame = -2
Query: 167 RMPQSSAGMPSSGGYPDGGNYGL--QSGYPSQVPQPGAGS---RVLPGGMYQGMPPYY 9
R+P S A S GGYP+GG+YGL +GY +Q P S RV PG MY +PPYY
Sbjct: 381 RLPGSGAMPASGGGYPEGGHYGLSASAGYQNQHHPPSGASPVPRVPPGSMYPNVPPYY 438