BLASTX nr result
ID: Atropa21_contig00001960
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00001960
(762 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,... 433 e-119
ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,... 417 e-114
ref|XP_004234180.1| PREDICTED: RNA polymerase sigma factor sigE,... 356 5e-96
ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD ... 296 7e-78
gb|EOY23460.1| Sigma factor E isoform 1 [Theobroma cacao] gi|508... 291 2e-76
ref|XP_006376620.1| RNA polymerase sigma subunit SigE family pro... 290 5e-76
ref|XP_006422121.1| hypothetical protein CICLE_v10004760mg [Citr... 289 6e-76
gb|EMJ20209.1| hypothetical protein PRUPE_ppa004259mg [Prunus pe... 289 8e-76
gb|EMJ20208.1| hypothetical protein PRUPE_ppa004259mg [Prunus pe... 289 8e-76
ref|XP_002333134.1| predicted protein [Populus trichocarpa] 285 2e-74
ref|XP_002513587.1| RNA polymerase sigma factor rpoD, putative [... 283 4e-74
ref|XP_002331841.1| predicted protein [Populus trichocarpa] 281 1e-73
ref|XP_004308009.1| PREDICTED: RNA polymerase sigma factor sigE,... 279 8e-73
ref|XP_004149458.1| PREDICTED: RNA polymerase sigma factor sigE,... 268 1e-69
ref|XP_004166500.1| PREDICTED: RNA polymerase sigma factor sigE,... 267 3e-69
gb|ESW09563.1| hypothetical protein PHAVU_009G1376001g, partial ... 265 1e-68
ref|NP_001276145.1| RNA polymerase sigma factor sigE, chloroplas... 265 2e-68
ref|XP_006581623.1| PREDICTED: RNA polymerase sigma factor sigE,... 265 2e-68
gb|EXB72455.1| RNA polymerase sigma factor rpoD [Morus notabilis] 264 2e-68
ref|XP_006578934.1| PREDICTED: RNA polymerase sigma factor sigE,... 264 3e-68
>ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like [Solanum tuberosum]
Length = 516
Score = 433 bits (1114), Expect = e-119
Identities = 224/253 (88%), Positives = 233/253 (92%)
Frame = -3
Query: 760 RSERVHAVSIEASPSTLELDYSEAAAKLESIYKRSLETASSNTEAKDHLVKRRPRTRKRI 581
RSERVHAV+IEASPSTLELDYSEAAAKLESIYKRSLETASSNTE +DHLVKRRPRTRKRI
Sbjct: 73 RSERVHAVAIEASPSTLELDYSEAAAKLESIYKRSLETASSNTEVQDHLVKRRPRTRKRI 132
Query: 580 VEGDKEAKKEVAEXXXXXXXXXXXXXXLDQRIALLNNKEGEIVASSQKRKLKEDTEDEKI 401
VEGD+EAKKEVA+ LDQRIALL NKEGE+VASS++RKLKEDTEDEKI
Sbjct: 133 VEGDEEAKKEVADNVVKNRRKTSKRLNLDQRIALLKNKEGEMVASSERRKLKEDTEDEKI 192
Query: 400 DKLVREYSGATDLASLDWKKMKIPPVLPSSEHAWLFKLMQPMKAILQVKENLQTDLGREP 221
DKLVREYSGATDLASLDWKKMKIPPVLPSSEH WLFKLMQPMKAILQVKENLQ DLGREP
Sbjct: 193 DKLVREYSGATDLASLDWKKMKIPPVLPSSEHVWLFKLMQPMKAILQVKENLQNDLGREP 252
Query: 220 TDGEVAEATNIDSSELRKNLEVGRAARNKLIKHNLRLVLFVMKKYFQDFANGSRFQDLCQ 41
TDGEVAEATN+D+SELRK LEVGRAARNKLIKHNLRLVLFVM KYFQDFANGSRFQDLCQ
Sbjct: 253 TDGEVAEATNMDASELRKKLEVGRAARNKLIKHNLRLVLFVMNKYFQDFANGSRFQDLCQ 312
Query: 40 AGVKGLITAIDRF 2
AGVKGLITAIDRF
Sbjct: 313 AGVKGLITAIDRF 325
>ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like isoform 1 [Solanum
lycopersicum]
Length = 516
Score = 417 bits (1073), Expect = e-114
Identities = 215/253 (84%), Positives = 226/253 (89%)
Frame = -3
Query: 760 RSERVHAVSIEASPSTLELDYSEAAAKLESIYKRSLETASSNTEAKDHLVKRRPRTRKRI 581
R+ERVHAV+IEA PSTLELDYSEAAAKLESIYKRSLETAS NTE KDHLVKRRPRTRKRI
Sbjct: 73 RTERVHAVTIEAPPSTLELDYSEAAAKLESIYKRSLETASPNTEVKDHLVKRRPRTRKRI 132
Query: 580 VEGDKEAKKEVAEXXXXXXXXXXXXXXLDQRIALLNNKEGEIVASSQKRKLKEDTEDEKI 401
VE D+EAKKEV + LDQRIALL NKEG+++ASS++RKL EDTEDEKI
Sbjct: 133 VESDEEAKKEVVDNVVKNRRKKSKRLNLDQRIALLKNKEGKMLASSERRKLNEDTEDEKI 192
Query: 400 DKLVREYSGATDLASLDWKKMKIPPVLPSSEHAWLFKLMQPMKAILQVKENLQTDLGREP 221
DKLVREYSGATDLASLDWKKMKIPPVLPSSEH WLFKLMQPMKAILQVKENLQ DLGREP
Sbjct: 193 DKLVREYSGATDLASLDWKKMKIPPVLPSSEHTWLFKLMQPMKAILQVKENLQNDLGREP 252
Query: 220 TDGEVAEATNIDSSELRKNLEVGRAARNKLIKHNLRLVLFVMKKYFQDFANGSRFQDLCQ 41
TDGEVAEATN+D+SELRK LE GRAARNKLIKHNLRLVLFVM KYFQDFAN SRFQDLCQ
Sbjct: 253 TDGEVAEATNMDASELRKKLEAGRAARNKLIKHNLRLVLFVMNKYFQDFANASRFQDLCQ 312
Query: 40 AGVKGLITAIDRF 2
AGVKGLITAIDRF
Sbjct: 313 AGVKGLITAIDRF 325
>ref|XP_004234180.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like isoform 2 [Solanum
lycopersicum]
Length = 487
Score = 356 bits (913), Expect = 5e-96
Identities = 192/253 (75%), Positives = 198/253 (78%)
Frame = -3
Query: 760 RSERVHAVSIEASPSTLELDYSEAAAKLESIYKRSLETASSNTEAKDHLVKRRPRTRKRI 581
R+ERVHAV+IEA PSTLELDYSEAAAKLESIYKRSLETAS NTE KDHLVKRRPRTRKRI
Sbjct: 73 RTERVHAVTIEAPPSTLELDYSEAAAKLESIYKRSLETASPNTEVKDHLVKRRPRTRKRI 132
Query: 580 VEGDKEAKKEVAEXXXXXXXXXXXXXXLDQRIALLNNKEGEIVASSQKRKLKEDTEDEKI 401
VE D+EAKKEV + LDQRIALL NKEG
Sbjct: 133 VESDEEAKKEVVDNVVKNRRKKSKRLNLDQRIALLKNKEG-------------------- 172
Query: 400 DKLVREYSGATDLASLDWKKMKIPPVLPSSEHAWLFKLMQPMKAILQVKENLQTDLGREP 221
ATDLASLDWKKMKIPPVLPSSEH WLFKLMQPMKAILQVKENLQ DLGREP
Sbjct: 173 ---------ATDLASLDWKKMKIPPVLPSSEHTWLFKLMQPMKAILQVKENLQNDLGREP 223
Query: 220 TDGEVAEATNIDSSELRKNLEVGRAARNKLIKHNLRLVLFVMKKYFQDFANGSRFQDLCQ 41
TDGEVAEATN+D+SELRK LE GRAARNKLIKHNLRLVLFVM KYFQDFAN SRFQDLCQ
Sbjct: 224 TDGEVAEATNMDASELRKKLEAGRAARNKLIKHNLRLVLFVMNKYFQDFANASRFQDLCQ 283
Query: 40 AGVKGLITAIDRF 2
AGVKGLITAIDRF
Sbjct: 284 AGVKGLITAIDRF 296
>ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
gi|302143685|emb|CBI22546.3| unnamed protein product
[Vitis vinifera]
Length = 518
Score = 296 bits (757), Expect = 7e-78
Identities = 157/253 (62%), Positives = 196/253 (77%), Gaps = 1/253 (0%)
Frame = -3
Query: 757 SERVHAVSI-EASPSTLELDYSEAAAKLESIYKRSLETASSNTEAKDHLVKRRPRTRKRI 581
S+RV AVS E SP ++ELDY+EAAAKLE+IYK S T S E + +V+R + RKR+
Sbjct: 76 SKRVKAVSTDEVSPCSVELDYNEAAAKLENIYKLSPATDVSEAEDLERVVRRGRQRRKRV 135
Query: 580 VEGDKEAKKEVAEXXXXXXXXXXXXXXLDQRIALLNNKEGEIVASSQKRKLKEDTEDEKI 401
D +A+KEV++ L++RIAL K+ + VAS QK++ ++ EDE I
Sbjct: 136 TLADDKAEKEVSDNVVRIHNKKPKRLSLEKRIALSKMKQEKAVASIQKKRDSKN-EDENI 194
Query: 400 DKLVREYSGATDLASLDWKKMKIPPVLPSSEHAWLFKLMQPMKAILQVKENLQTDLGREP 221
D LVREYS +TDL SLDWKKMKIPPVLP SEHAWLFKLMQPMK +L+VK+NLQ DLGREP
Sbjct: 195 DVLVREYSASTDLVSLDWKKMKIPPVLPPSEHAWLFKLMQPMKGLLEVKDNLQKDLGREP 254
Query: 220 TDGEVAEATNIDSSELRKNLEVGRAARNKLIKHNLRLVLFVMKKYFQDFANGSRFQDLCQ 41
TDGE+AEA ++ + ++R+++EVG+AARNKLIKHNLRLVLFV+ KYFQ+FANG +FQDLCQ
Sbjct: 255 TDGELAEAMSMSAVQVRRHMEVGQAARNKLIKHNLRLVLFVINKYFQEFANGPKFQDLCQ 314
Query: 40 AGVKGLITAIDRF 2
AGVKGLITAIDRF
Sbjct: 315 AGVKGLITAIDRF 327
>gb|EOY23460.1| Sigma factor E isoform 1 [Theobroma cacao]
gi|508776205|gb|EOY23461.1| Sigma factor E isoform 1
[Theobroma cacao]
Length = 516
Score = 291 bits (744), Expect = 2e-76
Identities = 152/248 (61%), Positives = 186/248 (75%)
Frame = -3
Query: 745 HAVSIEASPSTLELDYSEAAAKLESIYKRSLETASSNTEAKDHLVKRRPRTRKRIVEGDK 566
H + + SP TLE+DY+EAAAKLE+IYK S T SS+ E + +K R + RKR E D+
Sbjct: 79 HVFTDDGSPCTLEVDYNEAAAKLENIYKLSPATRSSDVEEVEGKIKGRRQRRKRSKESDE 138
Query: 565 EAKKEVAEXXXXXXXXXXXXXXLDQRIALLNNKEGEIVASSQKRKLKEDTEDEKIDKLVR 386
+ + LD RIAL N+E + V S +++K E+ E EKID+LVR
Sbjct: 139 KGVNSNDQIVVRNQTNRIKRLSLDNRIALKKNREEKPVVSVRRKKSSEN-ESEKIDRLVR 197
Query: 385 EYSGATDLASLDWKKMKIPPVLPSSEHAWLFKLMQPMKAILQVKENLQTDLGREPTDGEV 206
+YS +TDL SLDW+KMKIPPVLPS EH WLFKLMQPMKA+LQ KENLQ DLGR+PT+ E+
Sbjct: 198 DYSASTDLVSLDWRKMKIPPVLPSIEHTWLFKLMQPMKALLQAKENLQKDLGRDPTEDEL 257
Query: 205 AEATNIDSSELRKNLEVGRAARNKLIKHNLRLVLFVMKKYFQDFANGSRFQDLCQAGVKG 26
AEATN+ ++++RK+LEVG+AARNKLIKHNLRLVLF + KYFQDFANG RFQDLCQAGVKG
Sbjct: 258 AEATNMSAAQVRKHLEVGQAARNKLIKHNLRLVLFSINKYFQDFANGPRFQDLCQAGVKG 317
Query: 25 LITAIDRF 2
LITAIDRF
Sbjct: 318 LITAIDRF 325
>ref|XP_006376620.1| RNA polymerase sigma subunit SigE family protein [Populus
trichocarpa] gi|550326141|gb|ERP54417.1| RNA polymerase
sigma subunit SigE family protein [Populus trichocarpa]
Length = 512
Score = 290 bits (741), Expect = 5e-76
Identities = 153/252 (60%), Positives = 192/252 (76%)
Frame = -3
Query: 757 SERVHAVSIEASPSTLELDYSEAAAKLESIYKRSLETASSNTEAKDHLVKRRPRTRKRIV 578
S R+ AV E SP TL +DY+EAAAKLE+IYK S T +S+ E +++R + +++I
Sbjct: 73 SNRLKAVRTEVSPCTLLVDYNEAAAKLENIYKLSPGTDTSDVEDASGVIRRGRQRKRKIS 132
Query: 577 EGDKEAKKEVAEXXXXXXXXXXXXXXLDQRIALLNNKEGEIVASSQKRKLKEDTEDEKID 398
EGDKE + + L++RI+L E ++V+S+ KRK +++ E+EKID
Sbjct: 133 EGDKETEDRTGKIIVRNRAKKAKRLSLEKRISLRIKNEEKLVSSAGKRKDRKN-ENEKID 191
Query: 397 KLVREYSGATDLASLDWKKMKIPPVLPSSEHAWLFKLMQPMKAILQVKENLQTDLGREPT 218
LVREYS +TDL SLDWKKMKIPPVL SSEH WLFKLMQPMKA+LQVKE+LQ +LG EPT
Sbjct: 192 DLVREYSASTDLVSLDWKKMKIPPVLTSSEHVWLFKLMQPMKALLQVKEHLQENLGGEPT 251
Query: 217 DGEVAEATNIDSSELRKNLEVGRAARNKLIKHNLRLVLFVMKKYFQDFANGSRFQDLCQA 38
D E+A+ATN+D ++RK + VGRAARNKLIKHNLRLVLFV+KKYFQDFANG++FQD CQA
Sbjct: 252 DVELAKATNMDVLQVRKQIAVGRAARNKLIKHNLRLVLFVIKKYFQDFANGTKFQDFCQA 311
Query: 37 GVKGLITAIDRF 2
GVKGLITAIDRF
Sbjct: 312 GVKGLITAIDRF 323
>ref|XP_006422121.1| hypothetical protein CICLE_v10004760mg [Citrus clementina]
gi|567858878|ref|XP_006422122.1| hypothetical protein
CICLE_v10004760mg [Citrus clementina]
gi|568874930|ref|XP_006490565.1| PREDICTED: RNA
polymerase sigma factor sigE,
chloroplastic/mitochondrial-like isoform X1 [Citrus
sinensis] gi|568874932|ref|XP_006490566.1| PREDICTED:
RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like isoform X2 [Citrus
sinensis] gi|568874934|ref|XP_006490567.1| PREDICTED:
RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like isoform X3 [Citrus
sinensis] gi|557523994|gb|ESR35361.1| hypothetical
protein CICLE_v10004760mg [Citrus clementina]
gi|557523995|gb|ESR35362.1| hypothetical protein
CICLE_v10004760mg [Citrus clementina]
Length = 513
Score = 289 bits (740), Expect = 6e-76
Identities = 158/254 (62%), Positives = 190/254 (74%), Gaps = 1/254 (0%)
Frame = -3
Query: 760 RSERVHAV-SIEASPSTLELDYSEAAAKLESIYKRSLETASSNTEAKDHLVKRRPRTRKR 584
R ERV V S EASP TL++DY+EAAAKLE+IYK S +S + D +VKR + RKR
Sbjct: 71 RLERVKGVFSDEASPCTLDVDYNEAAAKLENIYKLSPAVTTSEVKYADGVVKRGRQRRKR 130
Query: 583 IVEGDKEAKKEVAEXXXXXXXXXXXXXXLDQRIALLNNKEGEIVASSQKRKLKEDTEDEK 404
I E +K++ + LD+RI L N++ ++V ++K K+ E EK
Sbjct: 131 IGEVEKKSDDVSGKPVVRNQVKRPKRLSLDKRIELRKNEDEKVVTKTRKTDSKD--EHEK 188
Query: 403 IDKLVREYSGATDLASLDWKKMKIPPVLPSSEHAWLFKLMQPMKAILQVKENLQTDLGRE 224
I+KLVREYS +TDL SLDWKKMKIPPVL S+EH WLFKLMQPMK +QVKE LQ DLGRE
Sbjct: 189 IEKLVREYSYSTDLVSLDWKKMKIPPVLSSTEHTWLFKLMQPMKVFVQVKEQLQKDLGRE 248
Query: 223 PTDGEVAEATNIDSSELRKNLEVGRAARNKLIKHNLRLVLFVMKKYFQDFANGSRFQDLC 44
PTD E+AEATN+ +++++K LEVGRAARNKLIKHNLRLVLFV+KKYFQDFANG RFQDLC
Sbjct: 249 PTDVELAEATNMSAAQVKKCLEVGRAARNKLIKHNLRLVLFVIKKYFQDFANGPRFQDLC 308
Query: 43 QAGVKGLITAIDRF 2
QAGVKGLITAIDRF
Sbjct: 309 QAGVKGLITAIDRF 322
>gb|EMJ20209.1| hypothetical protein PRUPE_ppa004259mg [Prunus persica]
Length = 519
Score = 289 bits (739), Expect = 8e-76
Identities = 151/244 (61%), Positives = 190/244 (77%), Gaps = 2/244 (0%)
Frame = -3
Query: 727 ASPSTLELDYSEAAAKLESIYKRSLET-ASSNTEAKDHLVKRRPRTRKRIVEGDKEA-KK 554
ASP TLE+DY+EAAAKLE++YKRS ET A+S+ E D L++R + RK+ E D + +
Sbjct: 85 ASPCTLEVDYNEAAAKLENLYKRSPETEANSDVEDVDGLMRRGRKRRKKTSESDADKDEN 144
Query: 553 EVAEXXXXXXXXXXXXXXLDQRIALLNNKEGEIVASSQKRKLKEDTEDEKIDKLVREYSG 374
+ L++R+AL NK+ ++++S +++ E+EKI++LVREYS
Sbjct: 145 RTSNTVVRNRTKKAKRLSLNKRVALKWNKDEKVISSIVRKRKSRKNENEKIEELVREYST 204
Query: 373 ATDLASLDWKKMKIPPVLPSSEHAWLFKLMQPMKAILQVKENLQTDLGREPTDGEVAEAT 194
+TDL SLDWKKMKIPPVL SSEHAWLFKLMQPMK +L+VKENLQ DLGREPT+GE+AEAT
Sbjct: 205 STDLVSLDWKKMKIPPVLTSSEHAWLFKLMQPMKGLLEVKENLQKDLGREPTNGELAEAT 264
Query: 193 NIDSSELRKNLEVGRAARNKLIKHNLRLVLFVMKKYFQDFANGSRFQDLCQAGVKGLITA 14
N+ +++K+LEVGRAAR+KLIKHNLRLVLFVM KYFQDFANG +FQDLCQAGVKGLITA
Sbjct: 265 NMSVVQVKKHLEVGRAARSKLIKHNLRLVLFVMNKYFQDFANGPKFQDLCQAGVKGLITA 324
Query: 13 IDRF 2
IDRF
Sbjct: 325 IDRF 328
>gb|EMJ20208.1| hypothetical protein PRUPE_ppa004259mg [Prunus persica]
Length = 390
Score = 289 bits (739), Expect = 8e-76
Identities = 151/244 (61%), Positives = 190/244 (77%), Gaps = 2/244 (0%)
Frame = -3
Query: 727 ASPSTLELDYSEAAAKLESIYKRSLET-ASSNTEAKDHLVKRRPRTRKRIVEGDKEA-KK 554
ASP TLE+DY+EAAAKLE++YKRS ET A+S+ E D L++R + RK+ E D + +
Sbjct: 85 ASPCTLEVDYNEAAAKLENLYKRSPETEANSDVEDVDGLMRRGRKRRKKTSESDADKDEN 144
Query: 553 EVAEXXXXXXXXXXXXXXLDQRIALLNNKEGEIVASSQKRKLKEDTEDEKIDKLVREYSG 374
+ L++R+AL NK+ ++++S +++ E+EKI++LVREYS
Sbjct: 145 RTSNTVVRNRTKKAKRLSLNKRVALKWNKDEKVISSIVRKRKSRKNENEKIEELVREYST 204
Query: 373 ATDLASLDWKKMKIPPVLPSSEHAWLFKLMQPMKAILQVKENLQTDLGREPTDGEVAEAT 194
+TDL SLDWKKMKIPPVL SSEHAWLFKLMQPMK +L+VKENLQ DLGREPT+GE+AEAT
Sbjct: 205 STDLVSLDWKKMKIPPVLTSSEHAWLFKLMQPMKGLLEVKENLQKDLGREPTNGELAEAT 264
Query: 193 NIDSSELRKNLEVGRAARNKLIKHNLRLVLFVMKKYFQDFANGSRFQDLCQAGVKGLITA 14
N+ +++K+LEVGRAAR+KLIKHNLRLVLFVM KYFQDFANG +FQDLCQAGVKGLITA
Sbjct: 265 NMSVVQVKKHLEVGRAARSKLIKHNLRLVLFVMNKYFQDFANGPKFQDLCQAGVKGLITA 324
Query: 13 IDRF 2
IDRF
Sbjct: 325 IDRF 328
>ref|XP_002333134.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 285 bits (728), Expect = 2e-74
Identities = 151/252 (59%), Positives = 190/252 (75%)
Frame = -3
Query: 757 SERVHAVSIEASPSTLELDYSEAAAKLESIYKRSLETASSNTEAKDHLVKRRPRTRKRIV 578
S R+ AV E SP TL +DY+EAAAKLE+IYK S T +S+ E +++R + +++I
Sbjct: 73 SNRLKAVRTEVSPCTLLVDYNEAAAKLENIYKLSPGTDTSDVEDASGVIRRGRQRKRKIS 132
Query: 577 EGDKEAKKEVAEXXXXXXXXXXXXXXLDQRIALLNNKEGEIVASSQKRKLKEDTEDEKID 398
EG KE + + L++RI+L E ++V+S+ KRK +++ E+EKID
Sbjct: 133 EGGKETEDRTGKIIVRNRAKKAKRLSLEKRISLRIKNEEKLVSSAGKRKDRKN-ENEKID 191
Query: 397 KLVREYSGATDLASLDWKKMKIPPVLPSSEHAWLFKLMQPMKAILQVKENLQTDLGREPT 218
LVREYS +TDL SLDWKKMKIPPVL SSEH WLFKLMQPMKA+LQVKE+LQ +LG EPT
Sbjct: 192 DLVREYSASTDLVSLDWKKMKIPPVLTSSEHVWLFKLMQPMKALLQVKEHLQENLGGEPT 251
Query: 217 DGEVAEATNIDSSELRKNLEVGRAARNKLIKHNLRLVLFVMKKYFQDFANGSRFQDLCQA 38
D E+A+A N+D ++RK + VGRAARNKLIKHNLRLVLFV+KKYFQDFANG++FQD CQA
Sbjct: 252 DVELAKAINMDVLQVRKQIAVGRAARNKLIKHNLRLVLFVIKKYFQDFANGTKFQDFCQA 311
Query: 37 GVKGLITAIDRF 2
GVKGLITAIDRF
Sbjct: 312 GVKGLITAIDRF 323
>ref|XP_002513587.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
gi|223547495|gb|EEF48990.1| RNA polymerase sigma factor
rpoD, putative [Ricinus communis]
Length = 501
Score = 283 bits (724), Expect = 4e-74
Identities = 150/243 (61%), Positives = 185/243 (76%)
Frame = -3
Query: 730 EASPSTLELDYSEAAAKLESIYKRSLETASSNTEAKDHLVKRRPRTRKRIVEGDKEAKKE 551
E S TLE+DY+EAAAKLE+IYK S T +S+ + + K R R RK EGD++A+
Sbjct: 72 EVSSGTLEVDYNEAAAKLENIYKLSPATDTSDVDINGLIRKGRQRKRKT-GEGDEKAENR 130
Query: 550 VAEXXXXXXXXXXXXXXLDQRIALLNNKEGEIVASSQKRKLKEDTEDEKIDKLVREYSGA 371
+ LD+RIAL N+E E+V +K+K +D ++EKI++LVR YS +
Sbjct: 131 TSRTIVRNRAKKTKRLSLDKRIALKKNEEEEVVGPIRKKKDSKD-DNEKIEELVRTYSAS 189
Query: 370 TDLASLDWKKMKIPPVLPSSEHAWLFKLMQPMKAILQVKENLQTDLGREPTDGEVAEATN 191
T+L SLDW+KMKIPPVLPS+EHAWLFKLMQPMK +L VK +LQ +LGR+PTDGE+AEATN
Sbjct: 190 TNLVSLDWRKMKIPPVLPSTEHAWLFKLMQPMKTLLPVKADLQKNLGRDPTDGELAEATN 249
Query: 190 IDSSELRKNLEVGRAARNKLIKHNLRLVLFVMKKYFQDFANGSRFQDLCQAGVKGLITAI 11
++ ++RK LEVGRAARNKLIKHNLRLV+FVM KYFQDFANG RFQDLCQAGVKGLITAI
Sbjct: 250 MNVEKVRKQLEVGRAARNKLIKHNLRLVMFVMNKYFQDFANGPRFQDLCQAGVKGLITAI 309
Query: 10 DRF 2
DRF
Sbjct: 310 DRF 312
>ref|XP_002331841.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 281 bits (720), Expect = 1e-73
Identities = 150/252 (59%), Positives = 192/252 (76%)
Frame = -3
Query: 757 SERVHAVSIEASPSTLELDYSEAAAKLESIYKRSLETASSNTEAKDHLVKRRPRTRKRIV 578
S+R+ AV E SP TL +DY+EAAAKLE+IYK S T +S+ E + +++R + +++
Sbjct: 73 SDRLKAVRTEVSPCTLGVDYNEAAAKLENIYKLSPGTDTSDVEDVNGVIRRCRQRKRKTS 132
Query: 577 EGDKEAKKEVAEXXXXXXXXXXXXXXLDQRIALLNNKEGEIVASSQKRKLKEDTEDEKID 398
E +KE ++ L +RIAL + ++V S KRK +++ E+EKID
Sbjct: 133 ECEKEDDGRTSKIIVRNQAKKAKRLSLQKRIALRIKSDEKLVTSVGKRKGRKN-ENEKID 191
Query: 397 KLVREYSGATDLASLDWKKMKIPPVLPSSEHAWLFKLMQPMKAILQVKENLQTDLGREPT 218
+LVREYS +TDLASLDWKKMKIPPVL S+EHAWLFKLMQPMKA LQVKE+LQ + GREPT
Sbjct: 192 ELVREYSSSTDLASLDWKKMKIPPVLTSAEHAWLFKLMQPMKASLQVKEHLQENSGREPT 251
Query: 217 DGEVAEATNIDSSELRKNLEVGRAARNKLIKHNLRLVLFVMKKYFQDFANGSRFQDLCQA 38
+GE+AEAT++D ++RK +EVGRAARNKLIKHNLRLVLFV+ KYFQD+ANG R+QDLCQA
Sbjct: 252 EGELAEATDMDVLQVRKQIEVGRAARNKLIKHNLRLVLFVINKYFQDYANGPRYQDLCQA 311
Query: 37 GVKGLITAIDRF 2
GVKGL+TAIDRF
Sbjct: 312 GVKGLMTAIDRF 323
>ref|XP_004308009.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like [Fragaria vesca subsp.
vesca]
Length = 520
Score = 279 bits (713), Expect = 8e-73
Identities = 149/252 (59%), Positives = 190/252 (75%), Gaps = 3/252 (1%)
Frame = -3
Query: 748 VHAVSIEASPST-LELDYSEAAAKLESIYKRSLETASSNTEAKDHL-VKRRPRTRKRIVE 575
V A IE +P+ LELDY+EAAAKLE++YKRS ET +S+ E D L +KR + RK+I E
Sbjct: 78 VKAALIEEAPTCDLELDYNEAAAKLENLYKRSPETEASDVENVDGLMIKRGRKRRKKISE 137
Query: 574 GDKEAKKEVAEXXXXXXXXXXXXXXL-DQRIALLNNKEGEIVASSQKRKLKEDTEDEKID 398
D + +K ++ D+R+AL NK+ ++ AS +++ + +E+E ++
Sbjct: 138 VDDKVEKRTSDDIVVRSVTKKAKRLSLDKRVALKWNKDEKVAASVVRKRKDKRSENEMME 197
Query: 397 KLVREYSGATDLASLDWKKMKIPPVLPSSEHAWLFKLMQPMKAILQVKENLQTDLGREPT 218
+LVREYS +TDL SLDWKKM+IPPVL SSEH WLFKLMQPMK +L+VKE LQ DLGREP
Sbjct: 198 ELVREYSASTDLVSLDWKKMRIPPVLSSSEHTWLFKLMQPMKGLLEVKEILQKDLGREPN 257
Query: 217 DGEVAEATNIDSSELRKNLEVGRAARNKLIKHNLRLVLFVMKKYFQDFANGSRFQDLCQA 38
GE+AEATN+ +++++LEVGRAARNKLIKHNLRLVLFV+ KYFQDFANG +FQDLCQA
Sbjct: 258 KGELAEATNMTVVQVKRHLEVGRAARNKLIKHNLRLVLFVINKYFQDFANGPKFQDLCQA 317
Query: 37 GVKGLITAIDRF 2
GVKGLITAIDRF
Sbjct: 318 GVKGLITAIDRF 329
>ref|XP_004149458.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like [Cucumis sativus]
Length = 514
Score = 268 bits (686), Expect = 1e-69
Identities = 150/259 (57%), Positives = 188/259 (72%), Gaps = 8/259 (3%)
Frame = -3
Query: 754 ERVHAVSI-EASPSTLELDYSEAAAKLESIYKRSLETASSNTEAKDHLVKRRPRTRKRIV 578
+RV AV I EA+P +L+LDY+EAAAKLE+I+K S T S+ E KD KR
Sbjct: 75 KRVKAVLIDEATPCSLDLDYNEAAAKLENIFKLSPMTEDSDKECKDGRSKR--------- 125
Query: 577 EGDKEAKKEV---AEXXXXXXXXXXXXXXLDQRIALLNNKEGEIVASSQKRK----LKED 419
G K +KK + LD+RIAL N KEG+ VA +K+K ++
Sbjct: 126 -GQKRSKKSANRPGDGIVRNQTKRIKRLDLDKRIALKNKKEGKAVALLRKQKDTKNEADE 184
Query: 418 TEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHAWLFKLMQPMKAILQVKENLQT 239
+D++ID+LVR+YS +TDL SLDWKKMKIPPVLPSSEH LFKL+QPMKA+++V+E LQ
Sbjct: 185 IDDDEIDRLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKALVEVQEELQK 244
Query: 238 DLGREPTDGEVAEATNIDSSELRKNLEVGRAARNKLIKHNLRLVLFVMKKYFQDFANGSR 59
LGREPT+GE+A ATN++ ++R+ LEVGRAARNKLIKHNLRLVLFV+ KYF+DFA+G +
Sbjct: 245 GLGREPTEGELANATNMNVIQVRRQLEVGRAARNKLIKHNLRLVLFVINKYFEDFASGPK 304
Query: 58 FQDLCQAGVKGLITAIDRF 2
FQDLCQAGVKGLITAIDRF
Sbjct: 305 FQDLCQAGVKGLITAIDRF 323
>ref|XP_004166500.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like [Cucumis sativus]
Length = 515
Score = 267 bits (682), Expect = 3e-69
Identities = 152/261 (58%), Positives = 188/261 (72%), Gaps = 10/261 (3%)
Frame = -3
Query: 754 ERVHAVSI-EASPSTLELDYSEAAAKLESIYKRSLETASSNTEAKDHLVKRRPRTRKRIV 578
+RV AV I EA+P +L+LDY+EAAAKLE+I+K S T S+ E KD KR
Sbjct: 75 KRVKAVLIDEATPCSLDLDYNEAAAKLENIFKLSPMTEDSDKECKDGRSKR--------- 125
Query: 577 EGDKEAKKEV---AEXXXXXXXXXXXXXXLDQRIALLN------NKEGEIVASSQKRKLK 425
G K +KK + LD+RIAL N NKEG+ V S +K+K +
Sbjct: 126 -GQKRSKKSANRPGDGIVRNQTKRIKRLDLDKRIALKNKRKAKRNKEGKAVPSLRKQK-E 183
Query: 424 EDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHAWLFKLMQPMKAILQVKENL 245
ED++ID+LVR+YS +TDL SLDWKKMKIPPVLPSSEH LFKL+QPMKA+++V+E L
Sbjct: 184 TKNEDDEIDRLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKALVEVQEEL 243
Query: 244 QTDLGREPTDGEVAEATNIDSSELRKNLEVGRAARNKLIKHNLRLVLFVMKKYFQDFANG 65
Q LGREPT+GE+A ATN++ ++R+ LEVGRAARNKLIKHNLRLVLFV+ KYF+DFA+G
Sbjct: 244 QKGLGREPTEGELANATNMNVIQVRRQLEVGRAARNKLIKHNLRLVLFVINKYFEDFASG 303
Query: 64 SRFQDLCQAGVKGLITAIDRF 2
+FQDLCQAGVKGLITAIDRF
Sbjct: 304 PKFQDLCQAGVKGLITAIDRF 324
>gb|ESW09563.1| hypothetical protein PHAVU_009G1376001g, partial [Phaseolus
vulgaris]
Length = 398
Score = 265 bits (677), Expect = 1e-68
Identities = 143/253 (56%), Positives = 185/253 (73%)
Frame = -3
Query: 760 RSERVHAVSIEASPSTLELDYSEAAAKLESIYKRSLETASSNTEAKDHLVKRRPRTRKRI 581
+ ERV V E S ++L++DY+EAAA LE+IYK S + ++N E D +KR R RK+I
Sbjct: 73 KRERVAFVE-ENSQTSLDVDYNEAAAMLENIYKLSPASDTANAECMDGKIKRVSRRRKKI 131
Query: 580 VEGDKEAKKEVAEXXXXXXXXXXXXXXLDQRIALLNNKEGEIVASSQKRKLKEDTEDEKI 401
V+ D E K + LDQRI+L +N +G+ V +QK++ + EKI
Sbjct: 132 VD-DCEEKDVNDDRVVRNQNKKAKRLGLDQRISLKSNTDGDEVVPTQKKR-NANNSVEKI 189
Query: 400 DKLVREYSGATDLASLDWKKMKIPPVLPSSEHAWLFKLMQPMKAILQVKENLQTDLGREP 221
++L+REYS +TD +DW++MKIPPVL SSEHAWLFKLMQP+K ILQVKE+LQ +L REP
Sbjct: 190 EELIREYSASTDFVGMDWRRMKIPPVLSSSEHAWLFKLMQPVKTILQVKEDLQKELAREP 249
Query: 220 TDGEVAEATNIDSSELRKNLEVGRAARNKLIKHNLRLVLFVMKKYFQDFANGSRFQDLCQ 41
DGE+A ATN+ + ++K LEVG+AARNKLIKHNLRLVLFV+ KYF DFA+GSRFQDLCQ
Sbjct: 250 ADGELANATNMSIAHVKKALEVGQAARNKLIKHNLRLVLFVINKYFTDFASGSRFQDLCQ 309
Query: 40 AGVKGLITAIDRF 2
+GVKGL+TAIDRF
Sbjct: 310 SGVKGLMTAIDRF 322
>ref|NP_001276145.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
[Glycine max] gi|382365034|dbj|BAM05478.1| sigma-like
factor 5B [Glycine max]
Length = 507
Score = 265 bits (676), Expect = 2e-68
Identities = 141/244 (57%), Positives = 183/244 (75%), Gaps = 1/244 (0%)
Frame = -3
Query: 730 EASPSTLELDYSEAAAKLESIYKRSLETASSNTEAKDHLVKRRPRTRKRIVEGDKEAK-K 554
E+SPS++++DY+EAAA LE++YK L AS N E D +KR R K++V+ +E + K
Sbjct: 76 ESSPSSMDVDYNEAAAMLENLYK--LSPASDNAECIDGKIKRVSRRGKKVVDESEEKELK 133
Query: 553 EVAEXXXXXXXXXXXXXXLDQRIALLNNKEGEIVASSQKRKLKEDTEDEKIDKLVREYSG 374
LDQRI+L NNK G+ V ++K++ + EKI++L+REYS
Sbjct: 134 GDWVVRNQNKNKKPKRLNLDQRISLKNNKSGDEVIPTRKKR-NVGNKIEKIEELIREYSV 192
Query: 373 ATDLASLDWKKMKIPPVLPSSEHAWLFKLMQPMKAILQVKENLQTDLGREPTDGEVAEAT 194
+TD S+DWK+M+IPPVL SSEHAWLFKLMQPMKA+LQVKE+LQ +L REP DGE+A+AT
Sbjct: 193 STDFVSMDWKRMRIPPVLSSSEHAWLFKLMQPMKALLQVKEDLQQELTREPADGELADAT 252
Query: 193 NIDSSELRKNLEVGRAARNKLIKHNLRLVLFVMKKYFQDFANGSRFQDLCQAGVKGLITA 14
N+ +++RK ++VG+AARNKLIKHNLRLVLFV+ KYF DFA+G RFQDLCQAGVKGLITA
Sbjct: 253 NMSITQVRKAIDVGQAARNKLIKHNLRLVLFVINKYFTDFASGPRFQDLCQAGVKGLITA 312
Query: 13 IDRF 2
IDRF
Sbjct: 313 IDRF 316
>ref|XP_006581623.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like isoform X2 [Glycine
max]
Length = 507
Score = 265 bits (676), Expect = 2e-68
Identities = 141/244 (57%), Positives = 183/244 (75%), Gaps = 1/244 (0%)
Frame = -3
Query: 730 EASPSTLELDYSEAAAKLESIYKRSLETASSNTEAKDHLVKRRPRTRKRIVEGDKEAK-K 554
E+SPS++++DY+EAAA LE++YK L AS N E D +KR R K++V+ +E + K
Sbjct: 76 ESSPSSMDVDYNEAAAMLENLYK--LSPASDNAECIDGKIKRVSRRGKKVVDESEEKELK 133
Query: 553 EVAEXXXXXXXXXXXXXXLDQRIALLNNKEGEIVASSQKRKLKEDTEDEKIDKLVREYSG 374
LDQRI+L NNK G+ V ++K++ + EKI++L+REYS
Sbjct: 134 GDWVVRNQNKNKKPKRLNLDQRISLKNNKSGDEVIPTRKKR-NVGNKIEKIEELIREYSV 192
Query: 373 ATDLASLDWKKMKIPPVLPSSEHAWLFKLMQPMKAILQVKENLQTDLGREPTDGEVAEAT 194
+TD S+DWK+M+IPPVL SSEHAWLFKLMQPMKA+LQVKE+LQ +L REP DGE+A+AT
Sbjct: 193 STDFVSMDWKRMRIPPVLSSSEHAWLFKLMQPMKALLQVKEDLQQELTREPADGELADAT 252
Query: 193 NIDSSELRKNLEVGRAARNKLIKHNLRLVLFVMKKYFQDFANGSRFQDLCQAGVKGLITA 14
N+ +++RK ++VG+AARNKLIKHNLRLVLFV+ KYF DFA+G RFQDLCQAGVKGLITA
Sbjct: 253 NMSITQVRKAIDVGQAARNKLIKHNLRLVLFVINKYFTDFASGPRFQDLCQAGVKGLITA 312
Query: 13 IDRF 2
IDRF
Sbjct: 313 IDRF 316
>gb|EXB72455.1| RNA polymerase sigma factor rpoD [Morus notabilis]
Length = 517
Score = 264 bits (675), Expect = 2e-68
Identities = 145/256 (56%), Positives = 183/256 (71%), Gaps = 4/256 (1%)
Frame = -3
Query: 757 SERVHAVSI-EASPSTLELDYSEAAAKLESIYKRSLETASSNTEAKDHLVKRRPRTRKRI 581
S RV AV+ EAS ST+E+DY+EAAAKLE+I+K S S++ E L R R R ++
Sbjct: 75 SNRVKAVATDEASTSTMEVDYNEAAAKLENIFKLS----SADVEDAVGLTSRGRRRRSKV 130
Query: 580 V-EGDKEAKKE--VAEXXXXXXXXXXXXXXLDQRIALLNNKEGEIVASSQKRKLKEDTED 410
+ E D+ A K+ ++ L +R+ L +KE + +++ + E+
Sbjct: 131 IGESDERAGKKSTTSDTVVRNRKKKAKRLSLHKRVELKRDKEENVAVVLVRKRRESLNEE 190
Query: 409 EKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHAWLFKLMQPMKAILQVKENLQTDLG 230
EKI+KLVREYS +TDL SLDWKKMKIPPVLPSSEH WLFKLMQP+K + QV E+LQ LG
Sbjct: 191 EKIEKLVREYSASTDLVSLDWKKMKIPPVLPSSEHTWLFKLMQPLKQLFQVGEDLQKTLG 250
Query: 229 REPTDGEVAEATNIDSSELRKNLEVGRAARNKLIKHNLRLVLFVMKKYFQDFANGSRFQD 50
REPT+ E+AEATNI +++++LE GRAARNKLIKHNLRLVLFVM KYFQDF NG +FQD
Sbjct: 251 REPTENELAEATNISVVQVKRHLEAGRAARNKLIKHNLRLVLFVMNKYFQDFTNGPKFQD 310
Query: 49 LCQAGVKGLITAIDRF 2
LCQAGV+GLITAIDRF
Sbjct: 311 LCQAGVRGLITAIDRF 326
>ref|XP_006578934.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like [Glycine max]
Length = 509
Score = 264 bits (674), Expect = 3e-68
Identities = 139/245 (56%), Positives = 182/245 (74%), Gaps = 2/245 (0%)
Frame = -3
Query: 730 EASPSTLELDYSEAAAKLESIYKRSLETASSNTEAKDHLVKRRPRTRKRIVEGDKEAK-K 554
E+SPS++++DY+EAAA LE+IYK S + + N E D +KR R K++V+ +E + K
Sbjct: 76 ESSPSSMDVDYNEAAAMLENIYKLSPASHTGNAECIDDKIKRVSRRGKKVVDESEEKELK 135
Query: 553 EVAEXXXXXXXXXXXXXXLDQRIALLNNKEG-EIVASSQKRKLKEDTEDEKIDKLVREYS 377
LDQRI+L NNK G E++ + +KR + E KI++L+REYS
Sbjct: 136 GDRVVRRQNKNKKAKRLTLDQRISLKNNKRGDEVIPTRKKRNFRNRIE--KIEELIREYS 193
Query: 376 GATDLASLDWKKMKIPPVLPSSEHAWLFKLMQPMKAILQVKENLQTDLGREPTDGEVAEA 197
+ D S+DWK+M+IPPVL SSEHAWLFKLMQPMKA+LQVKE+LQ +L REP DGE+A+A
Sbjct: 194 VSNDFISMDWKRMRIPPVLSSSEHAWLFKLMQPMKALLQVKEDLQKELAREPADGELADA 253
Query: 196 TNIDSSELRKNLEVGRAARNKLIKHNLRLVLFVMKKYFQDFANGSRFQDLCQAGVKGLIT 17
TN+ ++++K ++VG+AARNKLIKHNLRLVLFV+ KYF DFA+G RFQDLCQAGVKGLIT
Sbjct: 254 TNMSITQVKKAIDVGQAARNKLIKHNLRLVLFVINKYFTDFASGPRFQDLCQAGVKGLIT 313
Query: 16 AIDRF 2
AIDRF
Sbjct: 314 AIDRF 318