BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00001959
         (1496 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,...   597   e-168
ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,...   580   e-163
ref|XP_004234180.1| PREDICTED: RNA polymerase sigma factor sigE,...   523   e-146
ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD ...   426   e-116
gb|EOY23460.1| Sigma factor E isoform 1 [Theobroma cacao] gi|508...   424   e-116
ref|XP_002513587.1| RNA polymerase sigma factor rpoD, putative [...   412   e-112
gb|EMJ20209.1| hypothetical protein PRUPE_ppa004259mg [Prunus pe...   409   e-111
ref|XP_006376620.1| RNA polymerase sigma subunit SigE family pro...   407   e-111
ref|XP_006422121.1| hypothetical protein CICLE_v10004760mg [Citr...   405   e-110
ref|XP_002333134.1| predicted protein [Populus trichocarpa]           404   e-110
ref|XP_004308009.1| PREDICTED: RNA polymerase sigma factor sigE,...   399   e-108
ref|XP_002331841.1| predicted protein [Populus trichocarpa]           399   e-108
gb|EXB72455.1| RNA polymerase sigma factor rpoD [Morus notabilis]     398   e-108
ref|XP_004166500.1| PREDICTED: RNA polymerase sigma factor sigE,...   397   e-108
ref|XP_004149458.1| PREDICTED: RNA polymerase sigma factor sigE,...   396   e-107
gb|EMJ20208.1| hypothetical protein PRUPE_ppa004259mg [Prunus pe...   391   e-106
gb|ESW09563.1| hypothetical protein PHAVU_009G1376001g, partial ...   390   e-106
ref|XP_004502613.1| PREDICTED: RNA polymerase sigma factor sigE,...   389   e-105
ref|XP_003541542.1| PREDICTED: RNA polymerase sigma factor sigE,...   388   e-105
ref|NP_001276145.1| RNA polymerase sigma factor sigE, chloroplas...   384   e-104

>ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Solanum tuberosum]
          Length = 516

 Score =  597 bits (1540), Expect = e-168
 Identities = 318/381 (83%), Positives = 330/381 (86%), Gaps = 2/381 (0%)
 Frame = -3

Query: 1137 MGVVTVXXXXXXXXXXXSTRFSARLCPLKRPVIVSFKKDKTKNTTLVAPKESISLPIETX 958
            MGVVTV           S+RFS RLCPLKRPVIVSFKKDKTKNTTL+APKESISL IET 
Sbjct: 1    MGVVTVSSSASRSPLGLSSRFSTRLCPLKRPVIVSFKKDKTKNTTLIAPKESISLSIETS 60

Query: 957  XXXXXXXXXXXXXXXXVHAVSIEASPSALELDYSEAAAKLESIYKRSLETATCNTEAKGH 778
                            VHAV+IEASPS LELDYSEAAAKLESIYKRSLETA+ NTE + H
Sbjct: 61   KENEKRSRRVSKRSERVHAVAIEASPSTLELDYSEAAAKLESIYKRSLETASSNTEVQDH 120

Query: 777  LVKRRPRTR--IVEGDEEAKNEIADNVVXXXXXXXXRLNLDQRIALLKNKEGEIVASSQK 604
            LVKRRPRTR  IVEGDEEAK E+ADNVV        RLNLDQRIALLKNKEGE+VASS++
Sbjct: 121  LVKRRPRTRKRIVEGDEEAKKEVADNVVKNRRKTSKRLNLDQRIALLKNKEGEMVASSER 180

Query: 603  GKLKADTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSTEHAWLFKLMQPMKAILQV 424
             KLK DTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPS+EH WLFKLMQPMKAILQV
Sbjct: 181  RKLKEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHVWLFKLMQPMKAILQV 240

Query: 423  KENLQTELGREPTDSEVAEATNIDASELRKNLEVGRAARNKLIKHNLRLVLFVMNKYFQD 244
            KENLQ +LGREPTD EVAEATN+DASELRK LEVGRAARNKLIKHNLRLVLFVMNKYFQD
Sbjct: 241  KENLQNDLGREPTDGEVAEATNMDASELRKKLEVGRAARNKLIKHNLRLVLFVMNKYFQD 300

Query: 243  FANGSRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTKVPFG 64
            FANGSRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTKVPFG
Sbjct: 301  FANGSRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTKVPFG 360

Query: 63   LESIRVEIQKAKLELLFELQR 1
            LESIRVEIQKAKLELLFELQR
Sbjct: 361  LESIRVEIQKAKLELLFELQR 381


>ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform 1 [Solanum
            lycopersicum]
          Length = 516

 Score =  580 bits (1495), Expect = e-163
 Identities = 310/381 (81%), Positives = 323/381 (84%), Gaps = 2/381 (0%)
 Frame = -3

Query: 1137 MGVVTVXXXXXXXXXXXSTRFSARLCPLKRPVIVSFKKDKTKNTTLVAPKESISLPIETX 958
            MGVVTV           S+RFSARLCPLKRPVIVSFKKD TKNTTLV+PKESIS PIET 
Sbjct: 1    MGVVTVSSSASRSPLGLSSRFSARLCPLKRPVIVSFKKDITKNTTLVSPKESISSPIETS 60

Query: 957  XXXXXXXXXXXXXXXXVHAVSIEASPSALELDYSEAAAKLESIYKRSLETATCNTEAKGH 778
                            VHAV+IEA PS LELDYSEAAAKLESIYKRSLETA+ NTE K H
Sbjct: 61   KENEKRSRRVSKRTERVHAVTIEAPPSTLELDYSEAAAKLESIYKRSLETASPNTEVKDH 120

Query: 777  LVKRRPRTR--IVEGDEEAKNEIADNVVXXXXXXXXRLNLDQRIALLKNKEGEIVASSQK 604
            LVKRRPRTR  IVE DEEAK E+ DNVV        RLNLDQRIALLKNKEG+++ASS++
Sbjct: 121  LVKRRPRTRKRIVESDEEAKKEVVDNVVKNRRKKSKRLNLDQRIALLKNKEGKMLASSER 180

Query: 603  GKLKADTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSTEHAWLFKLMQPMKAILQV 424
             KL  DTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPS+EH WLFKLMQPMKAILQV
Sbjct: 181  RKLNEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHTWLFKLMQPMKAILQV 240

Query: 423  KENLQTELGREPTDSEVAEATNIDASELRKNLEVGRAARNKLIKHNLRLVLFVMNKYFQD 244
            KENLQ +LGREPTD EVAEATN+DASELRK LE GRAARNKLIKHNLRLVLFVMNKYFQD
Sbjct: 241  KENLQNDLGREPTDGEVAEATNMDASELRKKLEAGRAARNKLIKHNLRLVLFVMNKYFQD 300

Query: 243  FANGSRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTKVPFG 64
            FAN SRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIR MTTSSFTKVPFG
Sbjct: 301  FANASRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRYMTTSSFTKVPFG 360

Query: 63   LESIRVEIQKAKLELLFELQR 1
            LESIRVEIQKAKLELLFELQR
Sbjct: 361  LESIRVEIQKAKLELLFELQR 381


>ref|XP_004234180.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform 2 [Solanum
            lycopersicum]
          Length = 487

 Score =  523 bits (1348), Expect = e-146
 Identities = 289/381 (75%), Positives = 297/381 (77%), Gaps = 2/381 (0%)
 Frame = -3

Query: 1137 MGVVTVXXXXXXXXXXXSTRFSARLCPLKRPVIVSFKKDKTKNTTLVAPKESISLPIETX 958
            MGVVTV           S+RFSARLCPLKRPVIVSFKKD TKNTTLV+PKESIS PIET 
Sbjct: 1    MGVVTVSSSASRSPLGLSSRFSARLCPLKRPVIVSFKKDITKNTTLVSPKESISSPIETS 60

Query: 957  XXXXXXXXXXXXXXXXVHAVSIEASPSALELDYSEAAAKLESIYKRSLETATCNTEAKGH 778
                            VHAV+IEA PS LELDYSEAAAKLESIYKRSLETA+ NTE K H
Sbjct: 61   KENEKRSRRVSKRTERVHAVTIEAPPSTLELDYSEAAAKLESIYKRSLETASPNTEVKDH 120

Query: 777  LVKRRPRTR--IVEGDEEAKNEIADNVVXXXXXXXXRLNLDQRIALLKNKEGEIVASSQK 604
            LVKRRPRTR  IVE DEEAK E+ DNVV        RLNLDQRIALLKNKEG        
Sbjct: 121  LVKRRPRTRKRIVESDEEAKKEVVDNVVKNRRKKSKRLNLDQRIALLKNKEG-------- 172

Query: 603  GKLKADTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSTEHAWLFKLMQPMKAILQV 424
                                 ATDLASLDWKKMKIPPVLPS+EH WLFKLMQPMKAILQV
Sbjct: 173  ---------------------ATDLASLDWKKMKIPPVLPSSEHTWLFKLMQPMKAILQV 211

Query: 423  KENLQTELGREPTDSEVAEATNIDASELRKNLEVGRAARNKLIKHNLRLVLFVMNKYFQD 244
            KENLQ +LGREPTD EVAEATN+DASELRK LE GRAARNKLIKHNLRLVLFVMNKYFQD
Sbjct: 212  KENLQNDLGREPTDGEVAEATNMDASELRKKLEAGRAARNKLIKHNLRLVLFVMNKYFQD 271

Query: 243  FANGSRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTKVPFG 64
            FAN SRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIR MTTSSFTKVPFG
Sbjct: 272  FANASRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRYMTTSSFTKVPFG 331

Query: 63   LESIRVEIQKAKLELLFELQR 1
            LESIRVEIQKAKLELLFELQR
Sbjct: 332  LESIRVEIQKAKLELLFELQR 352


>ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
            gi|302143685|emb|CBI22546.3| unnamed protein product
            [Vitis vinifera]
          Length = 518

 Score =  426 bits (1094), Expect = e-116
 Identities = 233/384 (60%), Positives = 281/384 (73%), Gaps = 5/384 (1%)
 Frame = -3

Query: 1137 MGVVTVXXXXXXXXXXXS--TRFSARLCPLKRPVIVSFKKDKTKNTTLVAPKESISLPIE 964
            MGVVTV               +FS    PL+RP++++FK DK KN  LV P E I LPIE
Sbjct: 1    MGVVTVSSSASASRTPFGLNAKFSNHQTPLRRPLVLAFKADKAKNIALVTPHEPIPLPIE 60

Query: 963  TXXXXXXXXXXXXXXXXXVHAVSI-EASPSALELDYSEAAAKLESIYKRSLETATCNTEA 787
            T                 V AVS  E SP ++ELDY+EAAAKLE+IYK S  T     E 
Sbjct: 61   TSKDHKKRLRRASKPSKRVKAVSTDEVSPCSVELDYNEAAAKLENIYKLSPATDVSEAED 120

Query: 786  KGHLVKR--RPRTRIVEGDEEAKNEIADNVVXXXXXXXXRLNLDQRIALLKNKEGEIVAS 613
               +V+R  + R R+   D++A+ E++DNVV        RL+L++RIAL K K+ + VAS
Sbjct: 121  LERVVRRGRQRRKRVTLADDKAEKEVSDNVVRIHNKKPKRLSLEKRIALSKMKQEKAVAS 180

Query: 612  SQKGKLKADTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSTEHAWLFKLMQPMKAI 433
             QK K  +  EDE ID LVREYS +TDL SLDWKKMKIPPVLP +EHAWLFKLMQPMK +
Sbjct: 181  IQK-KRDSKNEDENIDVLVREYSASTDLVSLDWKKMKIPPVLPPSEHAWLFKLMQPMKGL 239

Query: 432  LQVKENLQTELGREPTDSEVAEATNIDASELRKNLEVGRAARNKLIKHNLRLVLFVMNKY 253
            L+VK+NLQ +LGREPTD E+AEA ++ A ++R+++EVG+AARNKLIKHNLRLVLFV+NKY
Sbjct: 240  LEVKDNLQKDLGREPTDGELAEAMSMSAVQVRRHMEVGQAARNKLIKHNLRLVLFVINKY 299

Query: 252  FQDFANGSRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTKV 73
            FQ+FANG +FQDLCQAGVKGLITAIDRFEP R FRLSTYGLFWIRHAI+RSMT SSFT+V
Sbjct: 300  FQEFANGPKFQDLCQAGVKGLITAIDRFEPKRSFRLSTYGLFWIRHAIMRSMTLSSFTRV 359

Query: 72   PFGLESIRVEIQKAKLELLFELQR 1
             FGLES+RVEIQ+AKLELLF+LQR
Sbjct: 360  SFGLESVRVEIQRAKLELLFKLQR 383


>gb|EOY23460.1| Sigma factor E isoform 1 [Theobroma cacao]
            gi|508776205|gb|EOY23461.1| Sigma factor E isoform 1
            [Theobroma cacao]
          Length = 516

 Score =  424 bits (1089), Expect = e-116
 Identities = 232/382 (60%), Positives = 277/382 (72%), Gaps = 3/382 (0%)
 Frame = -3

Query: 1137 MGVVTVXXXXXXXXXXXSTRFSARLCPLKRPVIVSFKKDKTKNTTLVAPKESISLPIETX 958
            MGVV+V           ST+FS + C  +RP+ V+FK DK+ NT LV P+E I LPIET 
Sbjct: 1    MGVVSVSSSAARTPLGLSTKFSTQRCTSRRPLTVAFKADKSDNTALVTPQEHILLPIETA 60

Query: 957  XXXXXXXXXXXXXXXXV-HAVSIEASPSALELDYSEAAAKLESIYKRSLETATCNTEAKG 781
                            V H  + + SP  LE+DY+EAAAKLE+IYK S  T + + E   
Sbjct: 61   KEHPKRRGKAKKDPKIVNHVFTDDGSPCTLEVDYNEAAAKLENIYKLSPATRSSDVEEVE 120

Query: 780  HLVK--RRPRTRIVEGDEEAKNEIADNVVXXXXXXXXRLNLDQRIALLKNKEGEIVASSQ 607
              +K  R+ R R  E DE+  N     VV        RL+LD RIAL KN+E + V S +
Sbjct: 121  GKIKGRRQRRKRSKESDEKGVNSNDQIVVRNQTNRIKRLSLDNRIALKKNREEKPVVSVR 180

Query: 606  KGKLKADTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSTEHAWLFKLMQPMKAILQ 427
            + K  ++ E EKID+LVR+YS +TDL SLDW+KMKIPPVLPS EH WLFKLMQPMKA+LQ
Sbjct: 181  RKK-SSENESEKIDRLVRDYSASTDLVSLDWRKMKIPPVLPSIEHTWLFKLMQPMKALLQ 239

Query: 426  VKENLQTELGREPTDSEVAEATNIDASELRKNLEVGRAARNKLIKHNLRLVLFVMNKYFQ 247
             KENLQ +LGR+PT+ E+AEATN+ A+++RK+LEVG+AARNKLIKHNLRLVLF +NKYFQ
Sbjct: 240  AKENLQKDLGRDPTEDELAEATNMSAAQVRKHLEVGQAARNKLIKHNLRLVLFSINKYFQ 299

Query: 246  DFANGSRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTKVPF 67
            DFANG RFQDLCQAGVKGLITAIDRFEP R+FRLSTY LFWIRHAIIRSMT SSFT+V F
Sbjct: 300  DFANGPRFQDLCQAGVKGLITAIDRFEPRRRFRLSTYSLFWIRHAIIRSMTLSSFTRVSF 359

Query: 66   GLESIRVEIQKAKLELLFELQR 1
            GLES+RVEIQ+AKLELLFEL R
Sbjct: 360  GLESVRVEIQRAKLELLFELHR 381


>ref|XP_002513587.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
            gi|223547495|gb|EEF48990.1| RNA polymerase sigma factor
            rpoD, putative [Ricinus communis]
          Length = 501

 Score =  412 bits (1060), Expect = e-112
 Identities = 227/380 (59%), Positives = 270/380 (71%), Gaps = 1/380 (0%)
 Frame = -3

Query: 1137 MGVVTVXXXXXXXXXXXSTRFSARLCPLKRPVIVSFKKDKTKNTTLVAPKESISLPIETX 958
            MGVVT            S +FS     +KR ++V+FK+DK  +  LV P+E   LPIET 
Sbjct: 1    MGVVTASSSAARTPLGLSLKFSTYRSTVKRSLVVAFKEDKANDIILVPPRERTPLPIETS 60

Query: 957  XXXXXXXXXXXXXXXXVHAVSIEASPSALELDYSEAAAKLESIYKRSLETATCNTEAKGH 778
                                + E S   LE+DY+EAAAKLE+IYK S  T T + +  G 
Sbjct: 61   KGKKRRGK-----------TNREVSSGTLEVDYNEAAAKLENIYKLSPATDTSDVDINGL 109

Query: 777  LVKRRPRTRIV-EGDEEAKNEIADNVVXXXXXXXXRLNLDQRIALLKNKEGEIVASSQKG 601
            + K R R R   EGDE+A+N  +  +V        RL+LD+RIAL KN+E E+V   +K 
Sbjct: 110  IRKGRQRKRKTGEGDEKAENRTSRTIVRNRAKKTKRLSLDKRIALKKNEEEEVVGPIRKK 169

Query: 600  KLKADTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSTEHAWLFKLMQPMKAILQVK 421
            K   D ++EKI++LVR YS +T+L SLDW+KMKIPPVLPSTEHAWLFKLMQPMK +L VK
Sbjct: 170  KDSKD-DNEKIEELVRTYSASTNLVSLDWRKMKIPPVLPSTEHAWLFKLMQPMKTLLPVK 228

Query: 420  ENLQTELGREPTDSEVAEATNIDASELRKNLEVGRAARNKLIKHNLRLVLFVMNKYFQDF 241
             +LQ  LGR+PTD E+AEATN++  ++RK LEVGRAARNKLIKHNLRLV+FVMNKYFQDF
Sbjct: 229  ADLQKNLGRDPTDGELAEATNMNVEKVRKQLEVGRAARNKLIKHNLRLVMFVMNKYFQDF 288

Query: 240  ANGSRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTKVPFGL 61
            ANG RFQDLCQAGVKGLITAIDRFEP R+F+LSTY LFWIRHAIIRSMT SSFTKV FGL
Sbjct: 289  ANGPRFQDLCQAGVKGLITAIDRFEPQRRFQLSTYSLFWIRHAIIRSMTLSSFTKVSFGL 348

Query: 60   ESIRVEIQKAKLELLFELQR 1
            ES+R EIQKAKLELL ELQR
Sbjct: 349  ESVRTEIQKAKLELLIELQR 368


>gb|EMJ20209.1| hypothetical protein PRUPE_ppa004259mg [Prunus persica]
          Length = 519

 Score =  409 bits (1050), Expect = e-111
 Identities = 224/385 (58%), Positives = 281/385 (72%), Gaps = 6/385 (1%)
 Frame = -3

Query: 1137 MGVVTVXXXXXXXXXXXSTRFSARLCPLKRPVIVSFKKDKTKNTTLVAPKESISLPIETX 958
            MGVVTV           ST+ + +   L++P+IV+FK D+   T LVAP+E I LPIET 
Sbjct: 1    MGVVTVSSSASRTPLGLSTKLTIQRSTLRKPLIVAFKTDEANKTALVAPQEKIPLPIETR 60

Query: 957  XXXXXXXXXXXXXXXXVHAVSIE-ASPSALELDYSEAAAKLESIYKRSLET-ATCNTEAK 784
                            V + + + ASP  LE+DY+EAAAKLE++YKRS ET A  + E  
Sbjct: 61   KKHQKRLGKARKLAKSVKSATTDVASPCTLEVDYNEAAAKLENLYKRSPETEANSDVEDV 120

Query: 783  GHLV----KRRPRTRIVEGDEEAKNEIADNVVXXXXXXXXRLNLDQRIALLKNKEGEIVA 616
              L+    KRR +T   + D++ +N  ++ VV        RL+L++R+AL  NK+ ++++
Sbjct: 121  DGLMRRGRKRRKKTSESDADKD-ENRTSNTVVRNRTKKAKRLSLNKRVALKWNKDEKVIS 179

Query: 615  SSQKGKLKADTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSTEHAWLFKLMQPMKA 436
            S  + +     E+EKI++LVREYS +TDL SLDWKKMKIPPVL S+EHAWLFKLMQPMK 
Sbjct: 180  SIVRKRKSRKNENEKIEELVREYSTSTDLVSLDWKKMKIPPVLTSSEHAWLFKLMQPMKG 239

Query: 435  ILQVKENLQTELGREPTDSEVAEATNIDASELRKNLEVGRAARNKLIKHNLRLVLFVMNK 256
            +L+VKENLQ +LGREPT+ E+AEATN+   +++K+LEVGRAAR+KLIKHNLRLVLFVMNK
Sbjct: 240  LLEVKENLQKDLGREPTNGELAEATNMSVVQVKKHLEVGRAARSKLIKHNLRLVLFVMNK 299

Query: 255  YFQDFANGSRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTK 76
            YFQDFANG +FQDLCQAGVKGLITAIDRFEP R FRLSTYGLFWIRHAIIRSMT SSFT+
Sbjct: 300  YFQDFANGPKFQDLCQAGVKGLITAIDRFEPKRSFRLSTYGLFWIRHAIIRSMTLSSFTR 359

Query: 75   VPFGLESIRVEIQKAKLELLFELQR 1
            V FGLES+R EIQKAKL +LF L+R
Sbjct: 360  VSFGLESVRAEIQKAKLGMLFALKR 384


>ref|XP_006376620.1| RNA polymerase sigma subunit SigE family protein [Populus
            trichocarpa] gi|550326141|gb|ERP54417.1| RNA polymerase
            sigma subunit SigE family protein [Populus trichocarpa]
          Length = 512

 Score =  407 bits (1045), Expect = e-111
 Identities = 225/381 (59%), Positives = 275/381 (72%), Gaps = 2/381 (0%)
 Frame = -3

Query: 1137 MGVVTVXXXXXXXXXXXSTRFSARLCPLKRPVIVSFKKDKTKNTTLVAPKESISLPIETX 958
            MGVV+V           ST+FS      KRP+IV+FK +K+ NT+LVAP E I LP+ET 
Sbjct: 1    MGVVSVSSSASRTPLGLSTKFSTYGSTAKRPLIVAFKANKSNNTSLVAPHEQIPLPVETT 60

Query: 957  XXXXXXXXXXXXXXXXVHAVSIEASPSALELDYSEAAAKLESIYKRSLETATCNTEAKGH 778
                              AV  E SP  L +DY+EAAAKLE+IYK S  T T + E    
Sbjct: 61   KGKKRLGKSKKSSNRLK-AVRTEVSPCTLLVDYNEAAAKLENIYKLSPGTDTSDVEDASG 119

Query: 777  LVKR--RPRTRIVEGDEEAKNEIADNVVXXXXXXXXRLNLDQRIALLKNKEGEIVASSQK 604
            +++R  + + +I EGD+E ++     +V        RL+L++RI+L    E ++V+S+ K
Sbjct: 120  VIRRGRQRKRKISEGDKETEDRTGKIIVRNRAKKAKRLSLEKRISLRIKNEEKLVSSAGK 179

Query: 603  GKLKADTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSTEHAWLFKLMQPMKAILQV 424
             K + + E+EKID LVREYS +TDL SLDWKKMKIPPVL S+EH WLFKLMQPMKA+LQV
Sbjct: 180  RKDRKN-ENEKIDDLVREYSASTDLVSLDWKKMKIPPVLTSSEHVWLFKLMQPMKALLQV 238

Query: 423  KENLQTELGREPTDSEVAEATNIDASELRKNLEVGRAARNKLIKHNLRLVLFVMNKYFQD 244
            KE+LQ  LG EPTD E+A+ATN+D  ++RK + VGRAARNKLIKHNLRLVLFV+ KYFQD
Sbjct: 239  KEHLQENLGGEPTDVELAKATNMDVLQVRKQIAVGRAARNKLIKHNLRLVLFVIKKYFQD 298

Query: 243  FANGSRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTKVPFG 64
            FANG++FQD CQAGVKGLITAIDRFEP R+FRLSTYGLFWIRHAIIRSMT SSFT+V FG
Sbjct: 299  FANGTKFQDFCQAGVKGLITAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFG 358

Query: 63   LESIRVEIQKAKLELLFELQR 1
            LESIR EIQKAKLEL F+L+R
Sbjct: 359  LESIRSEIQKAKLELWFQLKR 379


>ref|XP_006422121.1| hypothetical protein CICLE_v10004760mg [Citrus clementina]
            gi|567858878|ref|XP_006422122.1| hypothetical protein
            CICLE_v10004760mg [Citrus clementina]
            gi|568874930|ref|XP_006490565.1| PREDICTED: RNA
            polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X1 [Citrus
            sinensis] gi|568874932|ref|XP_006490566.1| PREDICTED: RNA
            polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X2 [Citrus
            sinensis] gi|568874934|ref|XP_006490567.1| PREDICTED: RNA
            polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X3 [Citrus
            sinensis] gi|557523994|gb|ESR35361.1| hypothetical
            protein CICLE_v10004760mg [Citrus clementina]
            gi|557523995|gb|ESR35362.1| hypothetical protein
            CICLE_v10004760mg [Citrus clementina]
          Length = 513

 Score =  405 bits (1042), Expect = e-110
 Identities = 223/354 (62%), Positives = 264/354 (74%), Gaps = 3/354 (0%)
 Frame = -3

Query: 1053 KRPVIVSFKKDKTKNTTLVAPKESISLPIETXXXXXXXXXXXXXXXXXVHAV-SIEASPS 877
            KRP+IV+FK DK+ N  L +P+E I LPIET                 V  V S EASP 
Sbjct: 27   KRPLIVAFKADKSNNQALFSPQEQIPLPIETPKRHQKRRENSRKRLERVKGVFSDEASPC 86

Query: 876  ALELDYSEAAAKLESIYKRSLETATCNTEAKGHLVKR--RPRTRIVEGDEEAKNEIADNV 703
             L++DY+EAAAKLE+IYK S    T   +    +VKR  + R RI E ++++ +     V
Sbjct: 87   TLDVDYNEAAAKLENIYKLSPAVTTSEVKYADGVVKRGRQRRKRIGEVEKKSDDVSGKPV 146

Query: 702  VXXXXXXXXRLNLDQRIALLKNKEGEIVASSQKGKLKADTEDEKIDKLVREYSGATDLAS 523
            V        RL+LD+RI L KN++ ++V  ++K   K   E EKI+KLVREYS +TDL S
Sbjct: 147  VRNQVKRPKRLSLDKRIELRKNEDEKVVTKTRKTDSK--DEHEKIEKLVREYSYSTDLVS 204

Query: 522  LDWKKMKIPPVLPSTEHAWLFKLMQPMKAILQVKENLQTELGREPTDSEVAEATNIDASE 343
            LDWKKMKIPPVL STEH WLFKLMQPMK  +QVKE LQ +LGREPTD E+AEATN+ A++
Sbjct: 205  LDWKKMKIPPVLSSTEHTWLFKLMQPMKVFVQVKEQLQKDLGREPTDVELAEATNMSAAQ 264

Query: 342  LRKNLEVGRAARNKLIKHNLRLVLFVMNKYFQDFANGSRFQDLCQAGVKGLITAIDRFEP 163
            ++K LEVGRAARNKLIKHNLRLVLFV+ KYFQDFANG RFQDLCQAGVKGLITAIDRFEP
Sbjct: 265  VKKCLEVGRAARNKLIKHNLRLVLFVIKKYFQDFANGPRFQDLCQAGVKGLITAIDRFEP 324

Query: 162  NRKFRLSTYGLFWIRHAIIRSMTTSSFTKVPFGLESIRVEIQKAKLELLFELQR 1
             R+FRLSTYGLFWIRHAIIRSMT SSFT+VPFGLES+R EIQ+AKLELLFEL+R
Sbjct: 325  KRRFRLSTYGLFWIRHAIIRSMTVSSFTRVPFGLESVRGEIQRAKLELLFELKR 378


>ref|XP_002333134.1| predicted protein [Populus trichocarpa]
          Length = 512

 Score =  404 bits (1037), Expect = e-110
 Identities = 224/381 (58%), Positives = 273/381 (71%), Gaps = 2/381 (0%)
 Frame = -3

Query: 1137 MGVVTVXXXXXXXXXXXSTRFSARLCPLKRPVIVSFKKDKTKNTTLVAPKESISLPIETX 958
            MGVV+V           ST+FS      KRP+IV+FK DK+ NT+LVAP E I LP+ET 
Sbjct: 1    MGVVSVSSSASRTPLGLSTKFSTYGSTAKRPLIVAFKADKSNNTSLVAPHEQIPLPVETT 60

Query: 957  XXXXXXXXXXXXXXXXVHAVSIEASPSALELDYSEAAAKLESIYKRSLETATCNTEAKGH 778
                              AV  E SP  L +DY+EAAAKLE+IYK S  T T + E    
Sbjct: 61   KGKKRLGKSKKSSNRLK-AVRTEVSPCTLLVDYNEAAAKLENIYKLSPGTDTSDVEDASG 119

Query: 777  LVKR--RPRTRIVEGDEEAKNEIADNVVXXXXXXXXRLNLDQRIALLKNKEGEIVASSQK 604
            +++R  + + +I EG +E ++     +V        RL+L++RI+L    E ++V+S+ K
Sbjct: 120  VIRRGRQRKRKISEGGKETEDRTGKIIVRNRAKKAKRLSLEKRISLRIKNEEKLVSSAGK 179

Query: 603  GKLKADTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSTEHAWLFKLMQPMKAILQV 424
             K + + E+EKID LVREYS +TDL SLDWKKMKIPPVL S+EH WLFKLMQPMKA+LQV
Sbjct: 180  RKDRKN-ENEKIDDLVREYSASTDLVSLDWKKMKIPPVLTSSEHVWLFKLMQPMKALLQV 238

Query: 423  KENLQTELGREPTDSEVAEATNIDASELRKNLEVGRAARNKLIKHNLRLVLFVMNKYFQD 244
            KE+LQ  LG EPTD E+A+A N+D  ++RK + VGRAARNKLIKHNLRLVLFV+ KYFQD
Sbjct: 239  KEHLQENLGGEPTDVELAKAINMDVLQVRKQIAVGRAARNKLIKHNLRLVLFVIKKYFQD 298

Query: 243  FANGSRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTKVPFG 64
            FANG++FQD CQAGVKGLITAIDRFEP R+FRLSTYGLFWIRHAIIRSMT SSFT+V FG
Sbjct: 299  FANGTKFQDFCQAGVKGLITAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFG 358

Query: 63   LESIRVEIQKAKLELLFELQR 1
            LESIR EIQKAKLEL F+L+R
Sbjct: 359  LESIRSEIQKAKLELWFQLKR 379


>ref|XP_004308009.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Fragaria vesca subsp.
            vesca]
          Length = 520

 Score =  399 bits (1025), Expect = e-108
 Identities = 220/385 (57%), Positives = 279/385 (72%), Gaps = 6/385 (1%)
 Frame = -3

Query: 1137 MGVVTVXXXXXXXXXXXSTRF-SARLCPLKRPVIVSFKKDKTKNTTLVAPKESISLPIET 961
            MGVVTV           ST   S++   L++P+IV+F+ DK+    LVAP+E + LPIET
Sbjct: 1    MGVVTVSSSVSRTPLGLSTNLVSSQRSTLRKPLIVAFRTDKSDKKALVAPQEKVPLPIET 60

Query: 960  XXXXXXXXXXXXXXXXXVHAVSIEASPSA-LELDYSEAAAKLESIYKRSLETATCNTE-A 787
                             V A  IE +P+  LELDY+EAAAKLE++YKRS ET   + E  
Sbjct: 61   GKKVQKRLGKARKLPKSVKAALIEEAPTCDLELDYNEAAAKLENLYKRSPETEASDVENV 120

Query: 786  KGHLVKR--RPRTRIVEGDEEAKNEIADN-VVXXXXXXXXRLNLDQRIALLKNKEGEIVA 616
             G ++KR  + R +I E D++ +   +D+ VV        RL+LD+R+AL  NK+ ++ A
Sbjct: 121  DGLMIKRGRKRRKKISEVDDKVEKRTSDDIVVRSVTKKAKRLSLDKRVALKWNKDEKVAA 180

Query: 615  SSQKGKLKADTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSTEHAWLFKLMQPMKA 436
            S  + +    +E+E +++LVREYS +TDL SLDWKKM+IPPVL S+EH WLFKLMQPMK 
Sbjct: 181  SVVRKRKDKRSENEMMEELVREYSASTDLVSLDWKKMRIPPVLSSSEHTWLFKLMQPMKG 240

Query: 435  ILQVKENLQTELGREPTDSEVAEATNIDASELRKNLEVGRAARNKLIKHNLRLVLFVMNK 256
            +L+VKE LQ +LGREP   E+AEATN+   +++++LEVGRAARNKLIKHNLRLVLFV+NK
Sbjct: 241  LLEVKEILQKDLGREPNKGELAEATNMTVVQVKRHLEVGRAARNKLIKHNLRLVLFVINK 300

Query: 255  YFQDFANGSRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTK 76
            YFQDFANG +FQDLCQAGVKGLITAIDRFEP R+FRLSTYGLFWIRHAIIRSMT SSFT+
Sbjct: 301  YFQDFANGPKFQDLCQAGVKGLITAIDRFEPQRRFRLSTYGLFWIRHAIIRSMTLSSFTR 360

Query: 75   VPFGLESIRVEIQKAKLELLFELQR 1
            V FGLES+R EIQKAKLE+L +L+R
Sbjct: 361  VSFGLESVRAEIQKAKLEMLVQLKR 385


>ref|XP_002331841.1| predicted protein [Populus trichocarpa]
          Length = 512

 Score =  399 bits (1024), Expect = e-108
 Identities = 224/381 (58%), Positives = 269/381 (70%), Gaps = 2/381 (0%)
 Frame = -3

Query: 1137 MGVVTVXXXXXXXXXXXSTRFSARLCPLKRPVIVSFKKDKTKNTTLVAPKESISLPIETX 958
            MG+V+V           ST+FS      KRP+IV+FK DK+  T LVAP E I LPIET 
Sbjct: 1    MGIVSVSSSASWTPLGFSTKFSTCRSTAKRPLIVAFKADKSNETALVAPHEQIPLPIETT 60

Query: 957  XXXXXXXXXXXXXXXXVHAVSIEASPSALELDYSEAAAKLESIYKRSLETATCNTEAKGH 778
                              AV  E SP  L +DY+EAAAKLE+IYK S  T T + E    
Sbjct: 61   KEKKRRGKSKKSSDRLK-AVRTEVSPCTLGVDYNEAAAKLENIYKLSPGTDTSDVEDVNG 119

Query: 777  LVKR--RPRTRIVEGDEEAKNEIADNVVXXXXXXXXRLNLDQRIALLKNKEGEIVASSQK 604
            +++R  + + +  E ++E     +  +V        RL+L +RIAL    + ++V S  K
Sbjct: 120  VIRRCRQRKRKTSECEKEDDGRTSKIIVRNQAKKAKRLSLQKRIALRIKSDEKLVTSVGK 179

Query: 603  GKLKADTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSTEHAWLFKLMQPMKAILQV 424
             K + + E+EKID+LVREYS +TDLASLDWKKMKIPPVL S EHAWLFKLMQPMKA LQV
Sbjct: 180  RKGRKN-ENEKIDELVREYSSSTDLASLDWKKMKIPPVLTSAEHAWLFKLMQPMKASLQV 238

Query: 423  KENLQTELGREPTDSEVAEATNIDASELRKNLEVGRAARNKLIKHNLRLVLFVMNKYFQD 244
            KE+LQ   GREPT+ E+AEAT++D  ++RK +EVGRAARNKLIKHNLRLVLFV+NKYFQD
Sbjct: 239  KEHLQENSGREPTEGELAEATDMDVLQVRKQIEVGRAARNKLIKHNLRLVLFVINKYFQD 298

Query: 243  FANGSRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTKVPFG 64
            +ANG R+QDLCQAGVKGL+TAIDRFEP R+FRLSTYGLFWIRHAIIRSMT SSFT+V FG
Sbjct: 299  YANGPRYQDLCQAGVKGLMTAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFG 358

Query: 63   LESIRVEIQKAKLELLFELQR 1
            LESIR EIQKAKLEL F+L R
Sbjct: 359  LESIRSEIQKAKLELWFQLLR 379


>gb|EXB72455.1| RNA polymerase sigma factor rpoD [Morus notabilis]
          Length = 517

 Score =  398 bits (1022), Expect = e-108
 Identities = 224/387 (57%), Positives = 280/387 (72%), Gaps = 8/387 (2%)
 Frame = -3

Query: 1137 MGVVTVXXXXXXXXXXXSTRFSA-RLCPLKRPVIVSFKKDKTKNTTLVAPKESISLPIET 961
            MGVVTV           S +FS+ R   LK+P+IV+FK DK+  T LVAP++ I LP+ET
Sbjct: 1    MGVVTVSSSASRTPLGLSLKFSSNRSSVLKKPLIVAFKGDKSNKTVLVAPQDQIILPVET 60

Query: 960  XXXXXXXXXXXXXXXXXVHAVSI-EASPSALELDYSEAAAKLESIYKRS---LETATCNT 793
                             V AV+  EAS S +E+DY+EAAAKLE+I+K S   +E A   T
Sbjct: 61   RKEVKSRVGKAKKSSNRVKAVATDEASTSTMEVDYNEAAAKLENIFKLSSADVEDAVGLT 120

Query: 792  EAKGHLVKRRPRTRIV-EGDEEA--KNEIADNVVXXXXXXXXRLNLDQRIALLKNKEGEI 622
             ++G    RR R++++ E DE A  K+  +D VV        RL+L +R+ L ++KE  +
Sbjct: 121  -SRG----RRRRSKVIGESDERAGKKSTTSDTVVRNRKKKAKRLSLHKRVELKRDKEENV 175

Query: 621  VASSQKGKLKADTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSTEHAWLFKLMQPM 442
                 + + ++  E+EKI+KLVREYS +TDL SLDWKKMKIPPVLPS+EH WLFKLMQP+
Sbjct: 176  AVVLVRKRRESLNEEEKIEKLVREYSASTDLVSLDWKKMKIPPVLPSSEHTWLFKLMQPL 235

Query: 441  KAILQVKENLQTELGREPTDSEVAEATNIDASELRKNLEVGRAARNKLIKHNLRLVLFVM 262
            K + QV E+LQ  LGREPT++E+AEATNI   +++++LE GRAARNKLIKHNLRLVLFVM
Sbjct: 236  KQLFQVGEDLQKTLGREPTENELAEATNISVVQVKRHLEAGRAARNKLIKHNLRLVLFVM 295

Query: 261  NKYFQDFANGSRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSF 82
            NKYFQDF NG +FQDLCQAGV+GLITAIDRFEP R+FRLSTYGLFWIRHAIIRSMT SSF
Sbjct: 296  NKYFQDFTNGPKFQDLCQAGVRGLITAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTVSSF 355

Query: 81   TKVPFGLESIRVEIQKAKLELLFELQR 1
            T+V FGLES+R EIQKAK+EL FEL+R
Sbjct: 356  TRVSFGLESVRAEIQKAKIELTFELKR 382


>ref|XP_004166500.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 515

 Score =  397 bits (1020), Expect = e-108
 Identities = 222/386 (57%), Positives = 273/386 (70%), Gaps = 7/386 (1%)
 Frame = -3

Query: 1137 MGVVTVXXXXXXXXXXXSTRFSARLCPLKRPVIVSFKKDKTKNTTLVAPKESISLPIETX 958
            MGVVTV             +FS     LKRP IV+FK DK  NTTLV+P E ++LP+E+ 
Sbjct: 1    MGVVTVSSAAARTPFRLGVKFSNHSSTLKRPSIVAFKADKHTNTTLVSPHEQVTLPVESN 60

Query: 957  XXXXXXXXXXXXXXXXVHAVSI-EASPSALELDYSEAAAKLESIYKRSLETATCNTEAKG 781
                            V AV I EA+P +L+LDY+EAAAKLE+I+K S  T   + E K 
Sbjct: 61   NRRKKRSGNTSKPLKRVKAVLIDEATPCSLDLDYNEAAAKLENIFKLSPMTEDSDKECKD 120

Query: 780  HLVKRRPRTRIVEGDEEAKNEIADNVVXXXXXXXXRLNLDQRIALL------KNKEGEIV 619
               KR  +       +++ N   D +V        RL+LD+RIAL       +NKEG+ V
Sbjct: 121  GRSKRGQKR-----SKKSANRPGDGIVRNQTKRIKRLDLDKRIALKNKRKAKRNKEGKAV 175

Query: 618  ASSQKGKLKADTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSTEHAWLFKLMQPMK 439
             S +K K +   ED++ID+LVR+YS +TDL SLDWKKMKIPPVLPS+EH  LFKL+QPMK
Sbjct: 176  PSLRKQK-ETKNEDDEIDRLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMK 234

Query: 438  AILQVKENLQTELGREPTDSEVAEATNIDASELRKNLEVGRAARNKLIKHNLRLVLFVMN 259
            A+++V+E LQ  LGREPT+ E+A ATN++  ++R+ LEVGRAARNKLIKHNLRLVLFV+N
Sbjct: 235  ALVEVQEELQKGLGREPTEGELANATNMNVIQVRRQLEVGRAARNKLIKHNLRLVLFVIN 294

Query: 258  KYFQDFANGSRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFT 79
            KYF+DFA+G +FQDLCQAGVKGLITAIDRFEP RKFRLSTY LFWIRHAIIRSMT SSFT
Sbjct: 295  KYFEDFASGPKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFT 354

Query: 78   KVPFGLESIRVEIQKAKLELLFELQR 1
            +V FGL+S+RVEIQ+AKLELL EL R
Sbjct: 355  RVSFGLDSVRVEIQRAKLELLCELHR 380


>ref|XP_004149458.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 514

 Score =  396 bits (1018), Expect = e-107
 Identities = 222/384 (57%), Positives = 273/384 (71%), Gaps = 5/384 (1%)
 Frame = -3

Query: 1137 MGVVTVXXXXXXXXXXXSTRFSARLCPLKRPVIVSFKKDKTKNTTLVAPKESISLPIETX 958
            MGVVTV             +FS     LKRP IV+FK DK  NTTLV+P E ++LP+E+ 
Sbjct: 1    MGVVTVSSAAARTPFRLGVKFSNHSSTLKRPSIVAFKADKHTNTTLVSPHEQVTLPVESN 60

Query: 957  XXXXXXXXXXXXXXXXVHAVSI-EASPSALELDYSEAAAKLESIYKRSLETATCNTEAKG 781
                            V AV I EA+P +L+LDY+EAAAKLE+I+K S  T   + E K 
Sbjct: 61   NRRKKRSGNTSKPLKRVKAVLIDEATPCSLDLDYNEAAAKLENIFKLSPMTEDSDKECKD 120

Query: 780  HLVKRRPRTRIVEGDEEAKNEIADNVVXXXXXXXXRLNLDQRIALLKNKEGEIVASSQKG 601
               KR  +       +++ N   D +V        RL+LD+RIAL   KEG+ VA  +K 
Sbjct: 121  GRSKRGQKR-----SKKSANRPGDGIVRNQTKRIKRLDLDKRIALKNKKEGKAVALLRKQ 175

Query: 600  K---LKADT-EDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSTEHAWLFKLMQPMKAI 433
            K    +AD  +D++ID+LVR+YS +TDL SLDWKKMKIPPVLPS+EH  LFKL+QPMKA+
Sbjct: 176  KDTKNEADEIDDDEIDRLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKAL 235

Query: 432  LQVKENLQTELGREPTDSEVAEATNIDASELRKNLEVGRAARNKLIKHNLRLVLFVMNKY 253
            ++V+E LQ  LGREPT+ E+A ATN++  ++R+ LEVGRAARNKLIKHNLRLVLFV+NKY
Sbjct: 236  VEVQEELQKGLGREPTEGELANATNMNVIQVRRQLEVGRAARNKLIKHNLRLVLFVINKY 295

Query: 252  FQDFANGSRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTKV 73
            F+DFA+G +FQDLCQAGVKGLITAIDRFEP RKFRLSTY LFWIRHAIIRSMT SSFT+V
Sbjct: 296  FEDFASGPKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFTRV 355

Query: 72   PFGLESIRVEIQKAKLELLFELQR 1
             FGL+S+RVEIQ+AKLELL EL R
Sbjct: 356  SFGLDSVRVEIQRAKLELLCELHR 379


>gb|EMJ20208.1| hypothetical protein PRUPE_ppa004259mg [Prunus persica]
          Length = 390

 Score =  391 bits (1005), Expect = e-106
 Identities = 216/384 (56%), Positives = 274/384 (71%), Gaps = 6/384 (1%)
 Frame = -3

Query: 1137 MGVVTVXXXXXXXXXXXSTRFSARLCPLKRPVIVSFKKDKTKNTTLVAPKESISLPIETX 958
            MGVVTV           ST+ + +   L++P+IV+FK D+   T LVAP+E I LPIET 
Sbjct: 1    MGVVTVSSSASRTPLGLSTKLTIQRSTLRKPLIVAFKTDEANKTALVAPQEKIPLPIETR 60

Query: 957  XXXXXXXXXXXXXXXXVHAVSIE-ASPSALELDYSEAAAKLESIYKRSLET-ATCNTEAK 784
                            V + + + ASP  LE+DY+EAAAKLE++YKRS ET A  + E  
Sbjct: 61   KKHQKRLGKARKLAKSVKSATTDVASPCTLEVDYNEAAAKLENLYKRSPETEANSDVEDV 120

Query: 783  GHLV----KRRPRTRIVEGDEEAKNEIADNVVXXXXXXXXRLNLDQRIALLKNKEGEIVA 616
              L+    KRR +T   + D++ +N  ++ VV        RL+L++R+AL  NK+ ++++
Sbjct: 121  DGLMRRGRKRRKKTSESDADKD-ENRTSNTVVRNRTKKAKRLSLNKRVALKWNKDEKVIS 179

Query: 615  SSQKGKLKADTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSTEHAWLFKLMQPMKA 436
            S  + +     E+EKI++LVREYS +TDL SLDWKKMKIPPVL S+EHAWLFKLMQPMK 
Sbjct: 180  SIVRKRKSRKNENEKIEELVREYSTSTDLVSLDWKKMKIPPVLTSSEHAWLFKLMQPMKG 239

Query: 435  ILQVKENLQTELGREPTDSEVAEATNIDASELRKNLEVGRAARNKLIKHNLRLVLFVMNK 256
            +L+VKENLQ +LGREPT+ E+AEATN+   +++K+LEVGRAAR+KLIKHNLRLVLFVMNK
Sbjct: 240  LLEVKENLQKDLGREPTNGELAEATNMSVVQVKKHLEVGRAARSKLIKHNLRLVLFVMNK 299

Query: 255  YFQDFANGSRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTK 76
            YFQDFANG +FQDLCQAGVKGLITAIDRFEP R FRLSTYGLFWIRHAIIRSMT SSFT+
Sbjct: 300  YFQDFANGPKFQDLCQAGVKGLITAIDRFEPKRSFRLSTYGLFWIRHAIIRSMTLSSFTR 359

Query: 75   VPFGLESIRVEIQKAKLELLFELQ 4
            V FGLES+R + +K  L     L+
Sbjct: 360  VSFGLESVRRKSKKLSLGCCLRLK 383


>gb|ESW09563.1| hypothetical protein PHAVU_009G1376001g, partial [Phaseolus vulgaris]
          Length = 398

 Score =  390 bits (1002), Expect = e-106
 Identities = 217/382 (56%), Positives = 268/382 (70%), Gaps = 3/382 (0%)
 Frame = -3

Query: 1137 MGVVTVXXXXXXXXXXXSTRFSARLCPLKRPVIVSFKKDKTKNTTLVAPKESISLPIETX 958
            MGVVTV           +T+FS     LKRP+I++FK DK  ++ LVA +E I +P+ET 
Sbjct: 1    MGVVTVSSSAARTPLGLNTKFSCNR--LKRPLIIAFKGDKHDDSALVATQEKIPVPVETS 58

Query: 957  XXXXXXXXXXXXXXXXVHAVSIEA-SPSALELDYSEAAAKLESIYKRSLETATCNTEAKG 781
                                 +E  S ++L++DY+EAAA LE+IYK S  + T N E   
Sbjct: 59   KTQKKKMGKAKKLPKRERVAFVEENSQTSLDVDYNEAAAMLENIYKLSPASDTANAECMD 118

Query: 780  HLVKR--RPRTRIVEGDEEAKNEIADNVVXXXXXXXXRLNLDQRIALLKNKEGEIVASSQ 607
              +KR  R R +IV+  EE K+   D VV        RL LDQRI+L  N +G+ V  +Q
Sbjct: 119  GKIKRVSRRRKKIVDDCEE-KDVNDDRVVRNQNKKAKRLGLDQRISLKSNTDGDEVVPTQ 177

Query: 606  KGKLKADTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSTEHAWLFKLMQPMKAILQ 427
            K K  A+   EKI++L+REYS +TD   +DW++MKIPPVL S+EHAWLFKLMQP+K ILQ
Sbjct: 178  K-KRNANNSVEKIEELIREYSASTDFVGMDWRRMKIPPVLSSSEHAWLFKLMQPVKTILQ 236

Query: 426  VKENLQTELGREPTDSEVAEATNIDASELRKNLEVGRAARNKLIKHNLRLVLFVMNKYFQ 247
            VKE+LQ EL REP D E+A ATN+  + ++K LEVG+AARNKLIKHNLRLVLFV+NKYF 
Sbjct: 237  VKEDLQKELAREPADGELANATNMSIAHVKKALEVGQAARNKLIKHNLRLVLFVINKYFT 296

Query: 246  DFANGSRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTKVPF 67
            DFA+GSRFQDLCQ+GVKGL+TAIDRFEPNR+FRLSTY LFWIRHAI RSMT SSFT+VPF
Sbjct: 297  DFASGSRFQDLCQSGVKGLMTAIDRFEPNRRFRLSTYSLFWIRHAITRSMTLSSFTRVPF 356

Query: 66   GLESIRVEIQKAKLELLFELQR 1
            GLES+R EIQKAK +L FELQR
Sbjct: 357  GLESVRGEIQKAKTKLTFELQR 378


>ref|XP_004502613.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Cicer arietinum]
          Length = 513

 Score =  389 bits (999), Expect = e-105
 Identities = 215/380 (56%), Positives = 265/380 (69%), Gaps = 1/380 (0%)
 Frame = -3

Query: 1137 MGVVTVXXXXXXXXXXXSTRFSARLCPLKRPVIVSFKKDKTKNTTLVAPKESISLPIETX 958
            MGVVTV            T+FS+    LKRP+ V+FK DK  +TTLVA +E I + ++T 
Sbjct: 1    MGVVTVSSSAARTPLGLKTKFSSHHPVLKRPLTVAFKGDKQNDTTLVATQEKIPMQVDTA 60

Query: 957  XXXXXXXXXXXXXXXXVHAVSIEAS-PSALELDYSEAAAKLESIYKRSLETATCNTEAKG 781
                               V  E + PS+L++DY+EAAA LE+IYK S  +  CN +   
Sbjct: 61   KTHKKRIAKTKKLPKKARVVFTEETFPSSLDVDYNEAAAILENIYKLSPTSDVCNADYID 120

Query: 780  HLVKRRPRTRIVEGDEEAKNEIADNVVXXXXXXXXRLNLDQRIALLKNKEGEIVASSQKG 601
              +KR  R     GD   +    D VV        RL+LD+RIAL KN   + + + +K 
Sbjct: 121  CKIKRVSRRGKKIGDVSKEELDNDRVVRNQNVKAKRLDLDERIALKKNNSEDAIPTRKKR 180

Query: 600  KLKADTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSTEHAWLFKLMQPMKAILQVK 421
             + +  E  KID+L+REYS   D  SLDWKKMKIPPVL S+EHA+LFKLMQPMKA+ QVK
Sbjct: 181  NVTSKIE--KIDELLREYSVPADFVSLDWKKMKIPPVLHSSEHAFLFKLMQPMKALHQVK 238

Query: 420  ENLQTELGREPTDSEVAEATNIDASELRKNLEVGRAARNKLIKHNLRLVLFVMNKYFQDF 241
            E+LQ EL REPT+ ++A+AT++  ++++K +EVGRAARNKLIKHNLRLVLFV+NKYF DF
Sbjct: 239  EDLQKELAREPTEDDIADATHMRTAQVKKAIEVGRAARNKLIKHNLRLVLFVINKYFSDF 298

Query: 240  ANGSRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTKVPFGL 61
            ANGSRFQDLCQAGVKGLITAIDRFEPNRKFRLSTY LFWIRHAIIRSMT SSF++VPFGL
Sbjct: 299  ANGSRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYSLFWIRHAIIRSMTLSSFSRVPFGL 358

Query: 60   ESIRVEIQKAKLELLFELQR 1
            ES+R EI++AKLEL FELQR
Sbjct: 359  ESVRAEIRRAKLELTFELQR 378


>ref|XP_003541542.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X1 [Glycine max]
            gi|571496981|ref|XP_006593757.1| PREDICTED: RNA
            polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X2 [Glycine max]
          Length = 512

 Score =  388 bits (996), Expect = e-105
 Identities = 213/380 (56%), Positives = 269/380 (70%), Gaps = 1/380 (0%)
 Frame = -3

Query: 1137 MGVVTVXXXXXXXXXXXSTRFSARLCPLKRPVIVSFKKDKTKNTTLVAPKESISLPIETX 958
            MGV+TV           +TR  +     KRP+I++FK +K+  TTLV+P+E I LP+ET 
Sbjct: 1    MGVITVSTSAARTPLRLNTRLISHQQVHKRPIILAFKGNKSNKTTLVSPQEKIPLPLETA 60

Query: 957  XXXXXXXXXXXXXXXXVHAVS-IEASPSALELDYSEAAAKLESIYKRSLETATCNTEAKG 781
                            V AVS +E SP  L++DY+EAAAKLE+IYK S  + TCN E   
Sbjct: 61   KKHQKRVGKTSESLKRVRAVSTVETSPCTLDVDYNEAAAKLENIYKLSPVSDTCNVEDID 120

Query: 780  HLVKRRPRTRIVEGDEEAKNEIADNVVXXXXXXXXRLNLDQRIALLKNKEGEIVASSQKG 601
              ++R  R R  +  EE  +   DNVV        RL+LD+RIAL  N + E++  +QK 
Sbjct: 121  SKIERVLRRR-KKVSEERDDGNCDNVVRNQNKKAKRLSLDKRIALKNNAKEEVIDQTQK- 178

Query: 600  KLKADTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSTEHAWLFKLMQPMKAILQVK 421
            K       + ID L+R+YS +TDL S+DWKKMKIPPVLPS+EHAWLFKLMQPMKA+LQ K
Sbjct: 179  KRNVKNRVQNIDVLIRDYSASTDLVSMDWKKMKIPPVLPSSEHAWLFKLMQPMKALLQAK 238

Query: 420  ENLQTELGREPTDSEVAEATNIDASELRKNLEVGRAARNKLIKHNLRLVLFVMNKYFQDF 241
            E+L+ E+ +E T  E+A+ATN+   ++RK +EVGRAARNKLIKHNLRLVLFV+NKYFQDF
Sbjct: 239  EDLK-EVDKEITGGELADATNMSIIQVRKAIEVGRAARNKLIKHNLRLVLFVINKYFQDF 297

Query: 240  ANGSRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTKVPFGL 61
            A+G RFQDLCQAGVKGLITAIDRFEP R+ +LSTY LFWIRH+I+RS+T SSFT+VPFGL
Sbjct: 298  ASGPRFQDLCQAGVKGLITAIDRFEPKRRLQLSTYSLFWIRHSIVRSITLSSFTRVPFGL 357

Query: 60   ESIRVEIQKAKLELLFELQR 1
            E +RV+IQ+ KL+L FELQR
Sbjct: 358  ERVRVDIQRTKLKLTFELQR 377


>ref|NP_001276145.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
            [Glycine max] gi|382365034|dbj|BAM05478.1| sigma-like
            factor 5B [Glycine max]
          Length = 507

 Score =  384 bits (985), Expect = e-104
 Identities = 214/382 (56%), Positives = 267/382 (69%), Gaps = 3/382 (0%)
 Frame = -3

Query: 1137 MGVVTVXXXXXXXXXXXSTRFSARLCPLKRPVIVSFKKDKTKNTTLVAPKESISLPIETX 958
            MGVVTV           +T+F      LKRP+IV+FK DK  ++ LVA +E I +P+ET 
Sbjct: 1    MGVVTVSSSAARTPLGLNTKFCNNR--LKRPLIVAFKGDKHNDSALVATQEKIPVPVETA 58

Query: 957  XXXXXXXXXXXXXXXXVHAVSIEASPSALELDYSEAAAKLESIYKRSLETATCNTEAKGH 778
                                  E+SPS++++DY+EAAA LE++YK  L  A+ N E    
Sbjct: 59   KKTQKKRIGKTNKLPKR-----ESSPSSMDVDYNEAAAMLENLYK--LSPASDNAECIDG 111

Query: 777  LVKRRPRTRIVEGDEEAKNEIADNVVXXXXXXXXR---LNLDQRIALLKNKEGEIVASSQ 607
             +KR  R      DE  + E+  + V        +   LNLDQRI+L  NK G+ V  ++
Sbjct: 112  KIKRVSRRGKKVVDESEEKELKGDWVVRNQNKNKKPKRLNLDQRISLKNNKSGDEVIPTR 171

Query: 606  KGKLKADTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSTEHAWLFKLMQPMKAILQ 427
            K K     + EKI++L+REYS +TD  S+DWK+M+IPPVL S+EHAWLFKLMQPMKA+LQ
Sbjct: 172  K-KRNVGNKIEKIEELIREYSVSTDFVSMDWKRMRIPPVLSSSEHAWLFKLMQPMKALLQ 230

Query: 426  VKENLQTELGREPTDSEVAEATNIDASELRKNLEVGRAARNKLIKHNLRLVLFVMNKYFQ 247
            VKE+LQ EL REP D E+A+ATN+  +++RK ++VG+AARNKLIKHNLRLVLFV+NKYF 
Sbjct: 231  VKEDLQQELTREPADGELADATNMSITQVRKAIDVGQAARNKLIKHNLRLVLFVINKYFT 290

Query: 246  DFANGSRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTKVPF 67
            DFA+G RFQDLCQAGVKGLITAIDRFEPNR+FRLSTY LFWIRHAIIRSMT S+FT+VPF
Sbjct: 291  DFASGPRFQDLCQAGVKGLITAIDRFEPNRRFRLSTYSLFWIRHAIIRSMTLSNFTRVPF 350

Query: 66   GLESIRVEIQKAKLELLFELQR 1
            GLES+R EIQKAK EL FELQR
Sbjct: 351  GLESVRAEIQKAKTELTFELQR 372