BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00001949
         (459 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006359092.1| PREDICTED: heterogeneous nuclear ribonucleop...   100   3e-19
ref|XP_004231546.1| PREDICTED: polyadenylate-binding protein 4-l...    93   4e-17
ref|XP_006485663.1| PREDICTED: heterogeneous nuclear ribonucleop...    57   2e-06
ref|XP_006451727.1| hypothetical protein CICLE_v10008394mg [Citr...    57   2e-06
ref|XP_002285377.1| PREDICTED: uncharacterized protein LOC100248...    56   4e-06
ref|XP_004137219.1| PREDICTED: uncharacterized protein LOC101207...    56   6e-06

>ref|XP_006359092.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like [Solanum
           tuberosum]
          Length = 424

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 63/144 (43%), Positives = 64/144 (44%), Gaps = 11/144 (7%)
 Frame = +2

Query: 59  DDRI---PSSNYGVPVSXXXXXXXXXXXXXXXXXXXXXXXXXMVAHQNPH--------AI 205
           DDR+   P SNYGVPVS                         MVAHQNPH          
Sbjct: 276 DDRVGSMPGSNYGVPVSGLGPYSGFSGGPGPGMQQPPPQPG-MVAHQNPHLNSAIGGPGY 334

Query: 206 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTPQSSAGMPSSGGYPDAGNYGL 385
                                                R PQSSAGMPSSGGYPD GNYGL
Sbjct: 335 GNQGPGSFTGGAGGYAGAGGYAGAGGYGGSSGDYSGYRMPQSSAGMPSSGGYPDGGNYGL 394

Query: 386 QSGYPSQVPQPGAGSRAPPGGMYQ 457
           QS YPSQVPQPGAGSR PPGGMYQ
Sbjct: 395 QSSYPSQVPQPGAGSRVPPGGMYQ 418


>ref|XP_004231546.1| PREDICTED: polyadenylate-binding protein 4-like isoform 1 [Solanum
           lycopersicum] gi|460371445|ref|XP_004231547.1|
           PREDICTED: polyadenylate-binding protein 4-like isoform
           2 [Solanum lycopersicum]
           gi|460371447|ref|XP_004231548.1| PREDICTED:
           polyadenylate-binding protein 4-like isoform 3 [Solanum
           lycopersicum] gi|460371449|ref|XP_004231549.1|
           PREDICTED: polyadenylate-binding protein 4-like isoform
           4 [Solanum lycopersicum]
          Length = 424

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 59/144 (40%), Positives = 63/144 (43%), Gaps = 11/144 (7%)
 Frame = +2

Query: 59  DDRI---PSSNYGVPVSXXXXXXXXXXXXXXXXXXXXXXXXXMVAHQNPH--------AI 205
           DDR+   P SNYGVPVS                         MVAHQNPH          
Sbjct: 276 DDRVGSMPGSNYGVPVSGMGPYSGFSGGPGPGMQQPPPQPG-MVAHQNPHLNSAIGGPGY 334

Query: 206 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTPQSSAGMPSSGGYPDAGNYGL 385
                                                R PQSSAGMPSSGG+PD G+Y L
Sbjct: 335 GNQGPGSFTGGAGGYAGAGGYAGAGGYGGNSGDYGGYRMPQSSAGMPSSGGFPDGGSYAL 394

Query: 386 QSGYPSQVPQPGAGSRAPPGGMYQ 457
           QS YP+QVPQPGAGSR PPGGMYQ
Sbjct: 395 QSAYPTQVPQPGAGSRVPPGGMYQ 418


>ref|XP_006485663.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A1 homolog
           isoform X1 [Citrus sinensis]
           gi|568864564|ref|XP_006485664.1| PREDICTED:
           heterogeneous nuclear ribonucleoproteins A1 homolog
           isoform X2 [Citrus sinensis]
          Length = 425

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 33/52 (63%), Positives = 35/52 (67%), Gaps = 6/52 (11%)
 Frame = +2

Query: 317 RTPQSSAGMPSSGGYPDAGNYGLQS---GYPSQVPQPGAGS---RAPPGGMY 454
           R P SSAGMPS GGYP+AG+YGL S   GYPSQ  Q    S   R PPGGMY
Sbjct: 368 RLPPSSAGMPS-GGYPEAGHYGLSSTSAGYPSQHHQAAGTSPVPRVPPGGMY 418


>ref|XP_006451727.1| hypothetical protein CICLE_v10008394mg [Citrus clementina]
           gi|567919444|ref|XP_006451728.1| hypothetical protein
           CICLE_v10008394mg [Citrus clementina]
           gi|557554953|gb|ESR64967.1| hypothetical protein
           CICLE_v10008394mg [Citrus clementina]
           gi|557554954|gb|ESR64968.1| hypothetical protein
           CICLE_v10008394mg [Citrus clementina]
          Length = 425

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 33/52 (63%), Positives = 35/52 (67%), Gaps = 6/52 (11%)
 Frame = +2

Query: 317 RTPQSSAGMPSSGGYPDAGNYGLQS---GYPSQVPQPGAGS---RAPPGGMY 454
           R P SSAGMPS GGYP+AG+YGL S   GYPSQ  Q    S   R PPGGMY
Sbjct: 368 RLPPSSAGMPS-GGYPEAGHYGLSSTSAGYPSQHHQAAGTSPVPRVPPGGMY 418


>ref|XP_002285377.1| PREDICTED: uncharacterized protein LOC100248626 [Vitis vinifera]
           gi|147789426|emb|CAN66609.1| hypothetical protein
           VITISV_017556 [Vitis vinifera]
          Length = 449

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 30/51 (58%), Positives = 34/51 (66%), Gaps = 5/51 (9%)
 Frame = +2

Query: 317 RTPQSSAGMPSSGGYPDAGNYGL--QSGYPSQVPQPGAGS---RAPPGGMY 454
           R P S+ GMPS GGYPD+G+Y L   S YPSQ+ QP   S   R PPGGMY
Sbjct: 393 RLPPSTVGMPS-GGYPDSGHYSLSSSSAYPSQIHQPAGTSPVPRVPPGGMY 442


>ref|XP_004137219.1| PREDICTED: uncharacterized protein LOC101207569 [Cucumis sativus]
           gi|449483196|ref|XP_004156519.1| PREDICTED:
           uncharacterized protein LOC101231665 [Cucumis sativus]
          Length = 434

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 5/51 (9%)
 Frame = +2

Query: 317 RTPQSSAGMPSSGGYPDAGNYGLQ--SGYPSQVPQPGAGS---RAPPGGMY 454
           R PQSS GMPS GGYPD+G+Y +   SG+P+Q  QP   S   R PPGGMY
Sbjct: 378 RLPQSSVGMPS-GGYPDSGHYSMSSASGHPNQHHQPAGTSPAPRVPPGGMY 427