BLASTX nr result
ID: Atropa21_contig00001868
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00001868
(1286 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006346763.1| PREDICTED: pre-mRNA-splicing factor 38B-like... 273 1e-70
ref|XP_004236682.1| PREDICTED: uncharacterized protein LOC101266... 270 1e-69
gb|EOY03150.1| PRP38 family protein isoform 1 [Theobroma cacao] ... 237 9e-60
ref|NP_001190430.1| putative splicing factor ATSRL1 [Arabidopsis... 236 2e-59
ref|XP_002870520.1| hypothetical protein ARALYDRAFT_915852 [Arab... 236 2e-59
ref|NP_851101.1| putative splicing factor ATSRL1 [Arabidopsis th... 236 2e-59
ref|XP_006284038.1| hypothetical protein CARUB_v10005159mg [Caps... 235 3e-59
ref|XP_006405888.1| hypothetical protein EUTSA_v10027788mg [Eutr... 233 1e-58
ref|XP_004490796.1| PREDICTED: pre-mRNA-splicing factor 38B-like... 230 1e-57
ref|XP_002528504.1| protein with unknown function [Ricinus commu... 228 3e-57
ref|XP_004960838.1| PREDICTED: pre-mRNA-splicing factor 38B-like... 225 4e-56
ref|XP_004960836.1| PREDICTED: pre-mRNA-splicing factor 38B-like... 225 4e-56
ref|XP_003616194.1| Pre-mRNA-splicing factor 38B [Medicago trunc... 224 6e-56
ref|XP_002305255.1| pre-mRNA splicing factor PRP38 family protei... 224 8e-56
ref|XP_006384124.1| hypothetical protein POPTR_0004s07420g [Popu... 224 8e-56
ref|XP_003631851.1| PREDICTED: uncharacterized protein LOC100267... 223 1e-55
emb|CBI28632.3| unnamed protein product [Vitis vinifera] 223 1e-55
ref|XP_002265636.1| PREDICTED: uncharacterized protein LOC100267... 223 1e-55
gb|EMS55224.1| hypothetical protein TRIUR3_33303 [Triticum urartu] 222 2e-55
ref|XP_003519321.1| PREDICTED: pre-mRNA-splicing factor 38B-like... 222 3e-55
>ref|XP_006346763.1| PREDICTED: pre-mRNA-splicing factor 38B-like [Solanum tuberosum]
Length = 430
Score = 273 bits (697), Expect = 1e-70
Identities = 132/141 (93%), Positives = 135/141 (95%)
Frame = +3
Query: 3 GFLYLRYLADFKTLWSWYEPYLKDDEEFSPGSSGKMTTMGVYVRDLFLGQYYFDTLLPRI 182
GFLYLRYL DFKTLW WYEPYLKDDEEFSPGSSG+MTTMGVYVRDLFLGQYYFDTLLPRI
Sbjct: 99 GFLYLRYLGDFKTLWGWYEPYLKDDEEFSPGSSGQMTTMGVYVRDLFLGQYYFDTLLPRI 158
Query: 183 PVPVMRMTVANLEKRNLPTKPSGSIGDSSRGSEETSRRPPSVKASLSVSFGQRAPHRAST 362
PVPV+R VA+LEK NLPTK SGSIGDSSRGSEETSRRPPSVKASLSVSFGQRAPHRAST
Sbjct: 159 PVPVVRTAVASLEKMNLPTKLSGSIGDSSRGSEETSRRPPSVKASLSVSFGQRAPHRAST 218
Query: 363 RDSSPIRRTIAPPPYDKDGAN 425
RDSSPIRRTIAPPPYDKDGAN
Sbjct: 219 RDSSPIRRTIAPPPYDKDGAN 239
Score = 122 bits (306), Expect = 3e-25
Identities = 60/70 (85%), Positives = 64/70 (91%), Gaps = 1/70 (1%)
Frame = +3
Query: 774 LHDQGISLDQQRTPPKDDSKEKKAVSSNLAKLKDLYGDLGSQKENVGDERAPNRDTSTEE 953
LHDQG SLDQQRTPP+D+SKEKKA SNLAKLKDLYGD G++KENVGD RAPNRDTSTEE
Sbjct: 361 LHDQGTSLDQQRTPPRDESKEKKAAPSNLAKLKDLYGDFGNKKENVGDGRAPNRDTSTEE 420
Query: 954 VIRLGGS-WR 980
VIRLGGS WR
Sbjct: 421 VIRLGGSTWR 430
>ref|XP_004236682.1| PREDICTED: uncharacterized protein LOC101266210 [Solanum
lycopersicum]
Length = 444
Score = 270 bits (689), Expect = 1e-69
Identities = 131/141 (92%), Positives = 134/141 (95%)
Frame = +3
Query: 3 GFLYLRYLADFKTLWSWYEPYLKDDEEFSPGSSGKMTTMGVYVRDLFLGQYYFDTLLPRI 182
GFLYLRYL DFKTLW WYEPYLKDDEEFSPGSSG+MTTMGVYVRDLFLGQYYFDTLLPRI
Sbjct: 99 GFLYLRYLGDFKTLWGWYEPYLKDDEEFSPGSSGQMTTMGVYVRDLFLGQYYFDTLLPRI 158
Query: 183 PVPVMRMTVANLEKRNLPTKPSGSIGDSSRGSEETSRRPPSVKASLSVSFGQRAPHRAST 362
PVPV+R VA+LEK NLPTK SGSIGDSSRGSEETSRRPPSVKASLSVSFGQRAPHRAST
Sbjct: 159 PVPVVRTAVASLEKMNLPTKLSGSIGDSSRGSEETSRRPPSVKASLSVSFGQRAPHRAST 218
Query: 363 RDSSPIRRTIAPPPYDKDGAN 425
RDSSPIRRTIAPP YDKDGAN
Sbjct: 219 RDSSPIRRTIAPPSYDKDGAN 239
Score = 123 bits (309), Expect = 1e-25
Identities = 59/70 (84%), Positives = 65/70 (92%), Gaps = 1/70 (1%)
Frame = +3
Query: 774 LHDQGISLDQQRTPPKDDSKEKKAVSSNLAKLKDLYGDLGSQKENVGDERAPNRDTSTEE 953
LHDQG LDQQRTPP+D+SKEKKA SSNLAKLKDLYGD G++KEN+GD+RAPNRDTSTEE
Sbjct: 375 LHDQGTRLDQQRTPPRDESKEKKAASSNLAKLKDLYGDFGNKKENIGDDRAPNRDTSTEE 434
Query: 954 VIRLGGS-WR 980
VIRLGGS WR
Sbjct: 435 VIRLGGSTWR 444
>gb|EOY03150.1| PRP38 family protein isoform 1 [Theobroma cacao]
gi|508711254|gb|EOY03151.1| PRP38 family protein isoform
1 [Theobroma cacao]
Length = 446
Score = 237 bits (604), Expect = 9e-60
Identities = 109/142 (76%), Positives = 129/142 (90%), Gaps = 1/142 (0%)
Frame = +3
Query: 3 GFLYLRYLADFKTLWSWYEPYLKDDEEFSPGSSGKMTTMGVYVRDLFLGQYYFDTLLPRI 182
GFLYLRY AD KTLW+W+EPY+KD+EEF PGS+G+MTTMGVYVRDL LGQYYFDTL PRI
Sbjct: 98 GFLYLRYAADPKTLWTWFEPYIKDEEEFPPGSNGRMTTMGVYVRDLLLGQYYFDTLFPRI 157
Query: 183 PVPVMRMTVANLEKRNLPTKPSGSIGDSSR-GSEETSRRPPSVKASLSVSFGQRAPHRAS 359
PVPV+R V+NLEK LPTKPSG+ GDS+R GS++T+RRPPSVKA+LSVSFGQRAPHRAS
Sbjct: 158 PVPVLRQVVSNLEKMKLPTKPSGATGDSNRHGSDDTARRPPSVKAALSVSFGQRAPHRAS 217
Query: 360 TRDSSPIRRTIAPPPYDKDGAN 425
TRDSSP+RR++ PPPYD+ G++
Sbjct: 218 TRDSSPVRRSLPPPPYDRSGSD 239
Score = 77.4 bits (189), Expect = 1e-11
Identities = 41/62 (66%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Frame = +3
Query: 798 DQQRTPPKDDSKEKKAVSSNLAKLKDLYGDLGSQKENVGDERAPNRDTSTEEVIRLGGS- 974
D+ +PPK+ SKEK + SSNLAKLKDLYGDL QK + G ER P RD S EEVIRLGGS
Sbjct: 386 DRHSSPPKEGSKEKTSASSNLAKLKDLYGDLSDQKGD-GFERVPRRDNSGEEVIRLGGST 444
Query: 975 WR 980
W+
Sbjct: 445 WK 446
>ref|NP_001190430.1| putative splicing factor ATSRL1 [Arabidopsis thaliana]
gi|332006793|gb|AED94176.1| putative splicing factor
ATSRL1 [Arabidopsis thaliana]
Length = 338
Score = 236 bits (602), Expect = 2e-59
Identities = 114/143 (79%), Positives = 127/143 (88%), Gaps = 2/143 (1%)
Frame = +3
Query: 3 GFLYLRYLADFKTLWSWYEPYLKDDEEFSPGSSGKMTTMGVYVRDLFLGQYYFDTLLPRI 182
GFLYLRY+AD KTLW+WYEPY+KDDEEFSPGS+G+MTTMGVYVRDL LG YYFDTL PRI
Sbjct: 44 GFLYLRYVADAKTLWTWYEPYIKDDEEFSPGSNGRMTTMGVYVRDLLLGLYYFDTLFPRI 103
Query: 183 PVPVMRMTVANLEKRNLPTKPSGSIGDSSRGSEETSRRPPSVKASLSVSFGQRAPHRAST 362
PVPVMR V+NLEK NLPTKPSGS GD +RGSE+T+RRPPSVKASLSVSFGQRAPHRAST
Sbjct: 104 PVPVMRQIVSNLEKMNLPTKPSGSTGDMTRGSEDTARRPPSVKASLSVSFGQRAPHRAST 163
Query: 363 RDSSPIRRTIAPPP--YDKDGAN 425
R SSP+RR PPP YD++G +
Sbjct: 164 RGSSPVRR---PPPTGYDRNGGD 183
Score = 62.8 bits (151), Expect = 3e-07
Identities = 34/70 (48%), Positives = 50/70 (71%), Gaps = 4/70 (5%)
Frame = +3
Query: 783 QGISLDQQRTPPKDDSKEKKA---VSSNLAKLKDLYGDLGSQKENVGDERAPNRDTSTEE 953
+ + ++++ TP +D S ++K+ V+SNLAKLKDLYGD SQK + G +D+S+EE
Sbjct: 271 RSVQIEREPTPKRDSSNKEKSAVTVNSNLAKLKDLYGDASSQKRDEG--FGTRKDSSSEE 328
Query: 954 VIRLGG-SWR 980
VI+LGG SWR
Sbjct: 329 VIKLGGSSWR 338
>ref|XP_002870520.1| hypothetical protein ARALYDRAFT_915852 [Arabidopsis lyrata subsp.
lyrata] gi|297316356|gb|EFH46779.1| hypothetical protein
ARALYDRAFT_915852 [Arabidopsis lyrata subsp. lyrata]
Length = 395
Score = 236 bits (602), Expect = 2e-59
Identities = 114/143 (79%), Positives = 127/143 (88%), Gaps = 2/143 (1%)
Frame = +3
Query: 3 GFLYLRYLADFKTLWSWYEPYLKDDEEFSPGSSGKMTTMGVYVRDLFLGQYYFDTLLPRI 182
GFLYLRY+AD KTLW+WYEPY+KDDEEFSPGS+G+MTTMGVYVRDL LG YYFDTL PRI
Sbjct: 99 GFLYLRYVADAKTLWTWYEPYIKDDEEFSPGSNGRMTTMGVYVRDLLLGLYYFDTLFPRI 158
Query: 183 PVPVMRMTVANLEKRNLPTKPSGSIGDSSRGSEETSRRPPSVKASLSVSFGQRAPHRAST 362
PVPVMR V+NLEK NLPTKPSGS GD +RGSE+T+RRPPSVKASLSVSFGQRAPHRAST
Sbjct: 159 PVPVMRQIVSNLEKMNLPTKPSGSTGDMTRGSEDTARRPPSVKASLSVSFGQRAPHRAST 218
Query: 363 RDSSPIRRTIAPPP--YDKDGAN 425
R SSP+RR PPP YD++G +
Sbjct: 219 RGSSPVRR---PPPSGYDRNGGD 238
Score = 59.3 bits (142), Expect = 3e-06
Identities = 36/69 (52%), Positives = 48/69 (69%), Gaps = 3/69 (4%)
Frame = +3
Query: 783 QGISLDQQRTPPKDDSKEKKAVS--SNLAKLKDLYGDLGSQKENVGDERAPNRDTSTEEV 956
+ + ++++ TP +KEK AV+ SNLAKLKDLYGD SQK + G RD+S+EEV
Sbjct: 332 RSVQIEREPTP---SNKEKSAVTVNSNLAKLKDLYGDASSQKRDEG--FGTRRDSSSEEV 386
Query: 957 IRLGG-SWR 980
I+LGG SWR
Sbjct: 387 IKLGGSSWR 395
>ref|NP_851101.1| putative splicing factor ATSRL1 [Arabidopsis thaliana]
gi|20260634|gb|AAM13215.1| unknown protein [Arabidopsis
thaliana] gi|31711878|gb|AAP68295.1| At5g37370
[Arabidopsis thaliana] gi|332006790|gb|AED94173.1|
putative splicing factor ATSRL1 [Arabidopsis thaliana]
Length = 393
Score = 236 bits (602), Expect = 2e-59
Identities = 114/143 (79%), Positives = 127/143 (88%), Gaps = 2/143 (1%)
Frame = +3
Query: 3 GFLYLRYLADFKTLWSWYEPYLKDDEEFSPGSSGKMTTMGVYVRDLFLGQYYFDTLLPRI 182
GFLYLRY+AD KTLW+WYEPY+KDDEEFSPGS+G+MTTMGVYVRDL LG YYFDTL PRI
Sbjct: 99 GFLYLRYVADAKTLWTWYEPYIKDDEEFSPGSNGRMTTMGVYVRDLLLGLYYFDTLFPRI 158
Query: 183 PVPVMRMTVANLEKRNLPTKPSGSIGDSSRGSEETSRRPPSVKASLSVSFGQRAPHRAST 362
PVPVMR V+NLEK NLPTKPSGS GD +RGSE+T+RRPPSVKASLSVSFGQRAPHRAST
Sbjct: 159 PVPVMRQIVSNLEKMNLPTKPSGSTGDMTRGSEDTARRPPSVKASLSVSFGQRAPHRAST 218
Query: 363 RDSSPIRRTIAPPP--YDKDGAN 425
R SSP+RR PPP YD++G +
Sbjct: 219 RGSSPVRR---PPPTGYDRNGGD 238
Score = 62.8 bits (151), Expect = 3e-07
Identities = 34/70 (48%), Positives = 50/70 (71%), Gaps = 4/70 (5%)
Frame = +3
Query: 783 QGISLDQQRTPPKDDSKEKKA---VSSNLAKLKDLYGDLGSQKENVGDERAPNRDTSTEE 953
+ + ++++ TP +D S ++K+ V+SNLAKLKDLYGD SQK + G +D+S+EE
Sbjct: 326 RSVQIEREPTPKRDSSNKEKSAVTVNSNLAKLKDLYGDASSQKRDEG--FGTRKDSSSEE 383
Query: 954 VIRLGG-SWR 980
VI+LGG SWR
Sbjct: 384 VIKLGGSSWR 393
>ref|XP_006284038.1| hypothetical protein CARUB_v10005159mg [Capsella rubella]
gi|482552743|gb|EOA16936.1| hypothetical protein
CARUB_v10005159mg [Capsella rubella]
Length = 349
Score = 235 bits (599), Expect = 3e-59
Identities = 113/143 (79%), Positives = 126/143 (88%), Gaps = 2/143 (1%)
Frame = +3
Query: 3 GFLYLRYLADFKTLWSWYEPYLKDDEEFSPGSSGKMTTMGVYVRDLFLGQYYFDTLLPRI 182
GFLYLRY+AD KTLW+WYEPY+ DDEEFSPGS+G+MTTMGVY+RDL LG YYFDTL PRI
Sbjct: 44 GFLYLRYVADSKTLWTWYEPYINDDEEFSPGSNGRMTTMGVYIRDLLLGLYYFDTLFPRI 103
Query: 183 PVPVMRMTVANLEKRNLPTKPSGSIGDSSRGSEETSRRPPSVKASLSVSFGQRAPHRAST 362
PVPVMR V+NLEK NLPTKPSGS GD SRGSE+T+RRPPSVKASLSVSFGQRAPHRAST
Sbjct: 104 PVPVMRQIVSNLEKMNLPTKPSGSTGDMSRGSEDTARRPPSVKASLSVSFGQRAPHRAST 163
Query: 363 RDSSPIRRTIAPPP--YDKDGAN 425
R SSP+RR PPP YD++G +
Sbjct: 164 RGSSPVRR---PPPSGYDRNGGD 183
>ref|XP_006405888.1| hypothetical protein EUTSA_v10027788mg [Eutrema salsugineum]
gi|557107026|gb|ESQ47341.1| hypothetical protein
EUTSA_v10027788mg [Eutrema salsugineum]
Length = 403
Score = 233 bits (594), Expect = 1e-58
Identities = 112/143 (78%), Positives = 126/143 (88%), Gaps = 2/143 (1%)
Frame = +3
Query: 3 GFLYLRYLADFKTLWSWYEPYLKDDEEFSPGSSGKMTTMGVYVRDLFLGQYYFDTLLPRI 182
GFLYLRY+AD KTLW+WYEPY+KDDEEF+PGS+G+MTTMGVYVRDL LG YYFDTL PRI
Sbjct: 99 GFLYLRYVADAKTLWTWYEPYIKDDEEFAPGSNGRMTTMGVYVRDLLLGLYYFDTLFPRI 158
Query: 183 PVPVMRMTVANLEKRNLPTKPSGSIGDSSRGSEETSRRPPSVKASLSVSFGQRAPHRAST 362
PVPVMR V+NLEK NLPTKPSGS GD +RGS++T+RRPPSVKASLSVSFGQRAPHRAST
Sbjct: 159 PVPVMRQIVSNLEKMNLPTKPSGSTGDMTRGSDDTARRPPSVKASLSVSFGQRAPHRAST 218
Query: 363 RDSSPIRRTIAPPP--YDKDGAN 425
R SSP+RR PPP YD +G +
Sbjct: 219 RGSSPVRR---PPPSGYDSNGGD 238
Score = 62.4 bits (150), Expect = 4e-07
Identities = 36/71 (50%), Positives = 51/71 (71%), Gaps = 5/71 (7%)
Frame = +3
Query: 783 QGISLDQQRTPPKDDSKEKKA---VSSNLAKLKDLYGDLGSQKENVGDER-APNRDTSTE 950
+ + ++++ TP +D+S +K+ V+SNLAKLKDLYGD +QK GDE RD+S+E
Sbjct: 336 RSLQIEREPTPKRDNSNREKSAVTVNSNLAKLKDLYGDASNQK---GDEGFGTRRDSSSE 392
Query: 951 EVIRLGG-SWR 980
EVI+LGG SWR
Sbjct: 393 EVIKLGGSSWR 403
>ref|XP_004490796.1| PREDICTED: pre-mRNA-splicing factor 38B-like [Cicer arietinum]
Length = 434
Score = 230 bits (586), Expect = 1e-57
Identities = 108/139 (77%), Positives = 126/139 (90%), Gaps = 1/139 (0%)
Frame = +3
Query: 3 GFLYLRYLADFKTLWSWYEPYLKDDEEFSPGSSGKMTTMGVYVRDLFLGQYYFDTLLPRI 182
GFLYLRY+AD KTLW+WYEPY KDDEEFSPGS+G+MTTMGVY+RDL LGQYYFDTL PRI
Sbjct: 98 GFLYLRYVADPKTLWNWYEPYAKDDEEFSPGSNGRMTTMGVYIRDLLLGQYYFDTLFPRI 157
Query: 183 PVPVMRMTVANLEKRNLPTKPSGSIGDSSR-GSEETSRRPPSVKASLSVSFGQRAPHRAS 359
PVPVMR V+NLEK LP SG+ G+++R GS++T+RRPPSVKA+LSVSFGQRAPHRAS
Sbjct: 158 PVPVMRQVVSNLEKLKLPITHSGTTGETTRHGSDDTARRPPSVKAALSVSFGQRAPHRAS 217
Query: 360 TRDSSPIRRTIAPPPYDKD 416
TRDSSPIRRT+APPP++K+
Sbjct: 218 TRDSSPIRRTLAPPPHEKN 236
Score = 70.1 bits (170), Expect = 2e-09
Identities = 36/66 (54%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Frame = +3
Query: 786 GISLDQQRTPPKDDSKEKKAVSSNLAKLKDLYGDLGSQKENVGDERAPNRDTSTEEVIRL 965
G + R+ P+ D +K + SSNLAKLKDLYGDLG+ K + ER P RD EEVIRL
Sbjct: 368 GTARYDSRSSPQRDGSKKTSASSNLAKLKDLYGDLGNSKGDANVERIPRRDNGGEEVIRL 427
Query: 966 GG-SWR 980
GG SW+
Sbjct: 428 GGSSWK 433
>ref|XP_002528504.1| protein with unknown function [Ricinus communis]
gi|223532064|gb|EEF33873.1| protein with unknown
function [Ricinus communis]
Length = 418
Score = 228 bits (582), Expect = 3e-57
Identities = 109/135 (80%), Positives = 121/135 (89%), Gaps = 1/135 (0%)
Frame = +3
Query: 3 GFLYLRYLADFKTLWSWYEPYLKDDEEFSPGSSGKMTTMGVYVRDLFLGQYYFDTLLPRI 182
GFLYLRY AD KTLW+W EPY+KDDEEFSPGS+G+ TTMGVYVRDL LGQYYFDTL PRI
Sbjct: 98 GFLYLRYAADAKTLWNWCEPYIKDDEEFSPGSNGRNTTMGVYVRDLLLGQYYFDTLFPRI 157
Query: 183 PVPVMRMTVANLEKRNLPTKPSGSIGDSSR-GSEETSRRPPSVKASLSVSFGQRAPHRAS 359
PVPVMR V+NLEK LPTKPSG+ GD+ R GS++T+RRPPSVKA+LSVSFGQRAPHRAS
Sbjct: 158 PVPVMRQIVSNLEKMKLPTKPSGATGDAVRHGSDDTARRPPSVKAALSVSFGQRAPHRAS 217
Query: 360 TRDSSPIRRTIAPPP 404
TRDSSP+RRTI PPP
Sbjct: 218 TRDSSPVRRTIPPPP 232
Score = 73.2 bits (178), Expect = 2e-10
Identities = 38/63 (60%), Positives = 48/63 (76%), Gaps = 2/63 (3%)
Frame = +3
Query: 798 DQQRTPPKDDSKEKK-AVSSNLAKLKDLYGDLGSQKENVGDERAPNRDTSTEEVIRLGGS 974
D+ +P +D KEK+ + SSNLAKLKDLYGDL Q+ + G ERAP RD S+EE+IRLGGS
Sbjct: 356 DRHSSPYRDGGKEKRTSASSNLAKLKDLYGDLSDQRGDGGVERAPRRDDSSEEIIRLGGS 415
Query: 975 -WR 980
W+
Sbjct: 416 TWK 418
>ref|XP_004960838.1| PREDICTED: pre-mRNA-splicing factor 38B-like isoform X3 [Setaria
italica]
Length = 335
Score = 225 bits (573), Expect = 4e-56
Identities = 109/131 (83%), Positives = 120/131 (91%), Gaps = 1/131 (0%)
Frame = +3
Query: 3 GFLYLRYLADFKTLWSWYEPYLKDDEEFSPGSSGKMTTMGVYVRDLFLGQYYFDTLLPRI 182
GFLYLRY+AD KTLW+WYEPYL+DDEEFSPGS+G+MTTMGVYVRDL LGQYYFD+LLPRI
Sbjct: 24 GFLYLRYVADPKTLWTWYEPYLRDDEEFSPGSNGRMTTMGVYVRDLILGQYYFDSLLPRI 83
Query: 183 PVPVMRMTVANLEKRNLPTKPSGSIGDSSR-GSEETSRRPPSVKASLSVSFGQRAPHRAS 359
P+PV R ANLEK LPTK SG+ GDSSR GSE+T+RRPPSVKASLSVSFGQRAPHRAS
Sbjct: 84 PLPVTRQVTANLEKMKLPTKLSGATGDSSRQGSEDTARRPPSVKASLSVSFGQRAPHRAS 143
Query: 360 TRDSSPIRRTI 392
TRDSSP+RRTI
Sbjct: 144 TRDSSPVRRTI 154
Score = 65.1 bits (157), Expect = 6e-08
Identities = 36/62 (58%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Frame = +3
Query: 798 DQQRTPPKDDSKEKKAVSSNLAKLKDLYGDLGSQKENVGDERAPNRDTSTEEVIRLGG-S 974
+Q+ +P + +KEK AVSSNLAKLKDLYGD+ +KE+ GD RD+ EEVIRLGG
Sbjct: 275 EQRSSPFGNGNKEKAAVSSNLAKLKDLYGDITEKKED-GDAEKLRRDSCAEEVIRLGGPR 333
Query: 975 WR 980
WR
Sbjct: 334 WR 335
>ref|XP_004960836.1| PREDICTED: pre-mRNA-splicing factor 38B-like isoform X1 [Setaria
italica] gi|514745261|ref|XP_004960837.1| PREDICTED:
pre-mRNA-splicing factor 38B-like isoform X2 [Setaria
italica]
Length = 409
Score = 225 bits (573), Expect = 4e-56
Identities = 109/131 (83%), Positives = 120/131 (91%), Gaps = 1/131 (0%)
Frame = +3
Query: 3 GFLYLRYLADFKTLWSWYEPYLKDDEEFSPGSSGKMTTMGVYVRDLFLGQYYFDTLLPRI 182
GFLYLRY+AD KTLW+WYEPYL+DDEEFSPGS+G+MTTMGVYVRDL LGQYYFD+LLPRI
Sbjct: 98 GFLYLRYVADPKTLWTWYEPYLRDDEEFSPGSNGRMTTMGVYVRDLILGQYYFDSLLPRI 157
Query: 183 PVPVMRMTVANLEKRNLPTKPSGSIGDSSR-GSEETSRRPPSVKASLSVSFGQRAPHRAS 359
P+PV R ANLEK LPTK SG+ GDSSR GSE+T+RRPPSVKASLSVSFGQRAPHRAS
Sbjct: 158 PLPVTRQVTANLEKMKLPTKLSGATGDSSRQGSEDTARRPPSVKASLSVSFGQRAPHRAS 217
Query: 360 TRDSSPIRRTI 392
TRDSSP+RRTI
Sbjct: 218 TRDSSPVRRTI 228
Score = 65.1 bits (157), Expect = 6e-08
Identities = 36/62 (58%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Frame = +3
Query: 798 DQQRTPPKDDSKEKKAVSSNLAKLKDLYGDLGSQKENVGDERAPNRDTSTEEVIRLGG-S 974
+Q+ +P + +KEK AVSSNLAKLKDLYGD+ +KE+ GD RD+ EEVIRLGG
Sbjct: 349 EQRSSPFGNGNKEKAAVSSNLAKLKDLYGDITEKKED-GDAEKLRRDSCAEEVIRLGGPR 407
Query: 975 WR 980
WR
Sbjct: 408 WR 409
>ref|XP_003616194.1| Pre-mRNA-splicing factor 38B [Medicago truncatula]
gi|355517529|gb|AES99152.1| Pre-mRNA-splicing factor 38B
[Medicago truncatula]
Length = 433
Score = 224 bits (571), Expect = 6e-56
Identities = 108/142 (76%), Positives = 125/142 (88%), Gaps = 1/142 (0%)
Frame = +3
Query: 3 GFLYLRYLADFKTLWSWYEPYLKDDEEFSPGSSGKMTTMGVYVRDLFLGQYYFDTLLPRI 182
GFLYLRY AD KTLWSW+EPY KDDEEFSPGS+G+MTTMGVY+RDL LGQYYFDTL PRI
Sbjct: 98 GFLYLRYYADPKTLWSWFEPYAKDDEEFSPGSNGRMTTMGVYIRDLLLGQYYFDTLFPRI 157
Query: 183 PVPVMRMTVANLEKRNLPTKPSGSIGDSSR-GSEETSRRPPSVKASLSVSFGQRAPHRAS 359
PVPVMR VANLEK LPT G+ G+++R GS++T+RRPPSVKA+LSVSFGQRAPHRAS
Sbjct: 158 PVPVMRQVVANLEKLKLPTTHCGTTGETTRHGSDDTARRPPSVKAALSVSFGQRAPHRAS 217
Query: 360 TRDSSPIRRTIAPPPYDKDGAN 425
TRDSSPIRRT+ P P++K+G +
Sbjct: 218 TRDSSPIRRTV-PAPHEKNGTD 238
Score = 72.0 bits (175), Expect = 5e-10
Identities = 37/66 (56%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Frame = +3
Query: 786 GISLDQQRTPPKDDSKEKKAVSSNLAKLKDLYGDLGSQKENVGDERAPNRDTSTEEVIRL 965
G + R+ P+ D +K + SSNLAKLKDLYGDLG K + ER P RD S EEVIRL
Sbjct: 367 GTARHDSRSSPQRDGSKKTSASSNLAKLKDLYGDLGESKGDANMERIPRRDNSGEEVIRL 426
Query: 966 GG-SWR 980
GG SW+
Sbjct: 427 GGSSWK 432
>ref|XP_002305255.1| pre-mRNA splicing factor PRP38 family protein [Populus trichocarpa]
gi|222848219|gb|EEE85766.1| pre-mRNA splicing factor
PRP38 family protein [Populus trichocarpa]
Length = 397
Score = 224 bits (570), Expect = 8e-56
Identities = 105/138 (76%), Positives = 120/138 (86%), Gaps = 1/138 (0%)
Frame = +3
Query: 3 GFLYLRYLADFKTLWSWYEPYLKDDEEFSPGSSGKMTTMGVYVRDLFLGQYYFDTLLPRI 182
GFLYLRY D KTLW+W+EPY+KDDEEFSPGSSG+ TT+G+YVRDL LGQYYFDTL PRI
Sbjct: 98 GFLYLRYAGDPKTLWNWFEPYIKDDEEFSPGSSGRKTTIGIYVRDLLLGQYYFDTLFPRI 157
Query: 183 PVPVMRMTVANLEKRNLPTKPSGSIGDSSR-GSEETSRRPPSVKASLSVSFGQRAPHRAS 359
PVPV+R ANLE LPTK SGS GD +R GS++T+RRPPSVKA+LSVSFGQRAPHRAS
Sbjct: 158 PVPVLRQITANLEMMKLPTKISGSTGDGNRHGSDDTARRPPSVKAALSVSFGQRAPHRAS 217
Query: 360 TRDSSPIRRTIAPPPYDK 413
TRDSSP+RRT+ PP YD+
Sbjct: 218 TRDSSPVRRTLPPPSYDR 235
Score = 79.7 bits (195), Expect = 2e-12
Identities = 40/62 (64%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Frame = +3
Query: 798 DQQRTPPKDDSKEKKAVSSNLAKLKDLYGDLGSQKENVGDERAPNRDTSTEEVIRLGGS- 974
DQ TP +D SK++ + SSNLAKLKDLYGDLG QK + G ER P RD EEV RLGGS
Sbjct: 336 DQHPTPQRDGSKDRTSASSNLAKLKDLYGDLGDQKGDAGLERGPRRDNDGEEVFRLGGST 395
Query: 975 WR 980
WR
Sbjct: 396 WR 397
>ref|XP_006384124.1| hypothetical protein POPTR_0004s07420g [Populus trichocarpa]
gi|118481208|gb|ABK92555.1| unknown [Populus
trichocarpa] gi|550340532|gb|ERP61921.1| hypothetical
protein POPTR_0004s07420g [Populus trichocarpa]
Length = 427
Score = 224 bits (570), Expect = 8e-56
Identities = 105/138 (76%), Positives = 120/138 (86%), Gaps = 1/138 (0%)
Frame = +3
Query: 3 GFLYLRYLADFKTLWSWYEPYLKDDEEFSPGSSGKMTTMGVYVRDLFLGQYYFDTLLPRI 182
GFLYLRY D KTLW+W+EPY+KDDEEFSPGSSG+ TT+G+YVRDL LGQYYFDTL PRI
Sbjct: 98 GFLYLRYAGDPKTLWNWFEPYIKDDEEFSPGSSGRKTTIGIYVRDLLLGQYYFDTLFPRI 157
Query: 183 PVPVMRMTVANLEKRNLPTKPSGSIGDSSR-GSEETSRRPPSVKASLSVSFGQRAPHRAS 359
PVPV+R ANLE LPTK SGS GD +R GS++T+RRPPSVKA+LSVSFGQRAPHRAS
Sbjct: 158 PVPVLRQITANLEMMKLPTKISGSTGDGNRHGSDDTARRPPSVKAALSVSFGQRAPHRAS 217
Query: 360 TRDSSPIRRTIAPPPYDK 413
TRDSSP+RRT+ PP YD+
Sbjct: 218 TRDSSPVRRTLPPPSYDR 235
Score = 79.7 bits (195), Expect = 2e-12
Identities = 40/62 (64%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Frame = +3
Query: 798 DQQRTPPKDDSKEKKAVSSNLAKLKDLYGDLGSQKENVGDERAPNRDTSTEEVIRLGGS- 974
DQ TP +D SK++ + SSNLAKLKDLYGDLG QK + G ER P RD EEV RLGGS
Sbjct: 366 DQHPTPQRDGSKDRTSASSNLAKLKDLYGDLGDQKGDAGLERGPRRDNDGEEVFRLGGST 425
Query: 975 WR 980
WR
Sbjct: 426 WR 427
>ref|XP_003631851.1| PREDICTED: uncharacterized protein LOC100267328 isoform 2 [Vitis
vinifera]
Length = 407
Score = 223 bits (568), Expect = 1e-55
Identities = 105/144 (72%), Positives = 126/144 (87%), Gaps = 3/144 (2%)
Frame = +3
Query: 3 GFLYLRYLADFKTLWSWYEPYLKDDEEFSPGSSGKMTTMGVYVRDLFLGQYYFDTLLPRI 182
GFLYLRY D KTLW+W+EPY+KD+EEFSPGS+G+MTTMG YVRDL LGQYYFDTL PRI
Sbjct: 98 GFLYLRYAGDPKTLWNWFEPYVKDEEEFSPGSTGRMTTMGAYVRDLLLGQYYFDTLFPRI 157
Query: 183 PVPVMRMTVANLEKRNLPTKPSGSIGDSSR-GSEETSRRPPSVKASLSVSFGQRAPHRAS 359
PVP+MR VANLEK LP+K +G GD++R GS++T+RRPPSVKA+LSVSFGQRAPHRAS
Sbjct: 158 PVPIMRQIVANLEKMKLPSKHAGVTGDTTRHGSDDTARRPPSVKAALSVSFGQRAPHRAS 217
Query: 360 TRDSSPIRRTIAPPP--YDKDGAN 425
TRDSSP+RRT+ PPP YD++ ++
Sbjct: 218 TRDSSPVRRTLPPPPPSYDRNSSD 241
Score = 69.7 bits (169), Expect = 2e-09
Identities = 36/63 (57%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Frame = +3
Query: 795 LDQQRTPPKDDSKEKKAVSSNLAKLKDLYGDLGSQKENVGDERAPNRDTSTEEVIRLGG- 971
+D + +P D SKEK + S+NLAKL+DLYGD G QK ER RD S EEVIRLGG
Sbjct: 345 IDHRSSPLADGSKEKTSASANLAKLRDLYGDTGDQKGGSAMERGSRRDNSGEEVIRLGGS 404
Query: 972 SWR 980
SW+
Sbjct: 405 SWK 407
>emb|CBI28632.3| unnamed protein product [Vitis vinifera]
Length = 383
Score = 223 bits (568), Expect = 1e-55
Identities = 105/144 (72%), Positives = 126/144 (87%), Gaps = 3/144 (2%)
Frame = +3
Query: 3 GFLYLRYLADFKTLWSWYEPYLKDDEEFSPGSSGKMTTMGVYVRDLFLGQYYFDTLLPRI 182
GFLYLRY D KTLW+W+EPY+KD+EEFSPGS+G+MTTMG YVRDL LGQYYFDTL PRI
Sbjct: 98 GFLYLRYAGDPKTLWNWFEPYVKDEEEFSPGSTGRMTTMGAYVRDLLLGQYYFDTLFPRI 157
Query: 183 PVPVMRMTVANLEKRNLPTKPSGSIGDSSR-GSEETSRRPPSVKASLSVSFGQRAPHRAS 359
PVP+MR VANLEK LP+K +G GD++R GS++T+RRPPSVKA+LSVSFGQRAPHRAS
Sbjct: 158 PVPIMRQIVANLEKMKLPSKHAGVTGDTTRHGSDDTARRPPSVKAALSVSFGQRAPHRAS 217
Query: 360 TRDSSPIRRTIAPPP--YDKDGAN 425
TRDSSP+RRT+ PPP YD++ ++
Sbjct: 218 TRDSSPVRRTLPPPPPSYDRNSSD 241
Score = 63.2 bits (152), Expect = 2e-07
Identities = 33/52 (63%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Frame = +3
Query: 828 SKEKKAVSSNLAKLKDLYGDLGSQKENVGDERAPNRDTSTEEVIRLGG-SWR 980
SKEK + S+NLAKL+DLYGD G QK ER RD S EEVIRLGG SW+
Sbjct: 332 SKEKTSASANLAKLRDLYGDTGDQKGGSAMERGSRRDNSGEEVIRLGGSSWK 383
>ref|XP_002265636.1| PREDICTED: uncharacterized protein LOC100267328 isoform 1 [Vitis
vinifera]
Length = 433
Score = 223 bits (568), Expect = 1e-55
Identities = 105/144 (72%), Positives = 126/144 (87%), Gaps = 3/144 (2%)
Frame = +3
Query: 3 GFLYLRYLADFKTLWSWYEPYLKDDEEFSPGSSGKMTTMGVYVRDLFLGQYYFDTLLPRI 182
GFLYLRY D KTLW+W+EPY+KD+EEFSPGS+G+MTTMG YVRDL LGQYYFDTL PRI
Sbjct: 98 GFLYLRYAGDPKTLWNWFEPYVKDEEEFSPGSTGRMTTMGAYVRDLLLGQYYFDTLFPRI 157
Query: 183 PVPVMRMTVANLEKRNLPTKPSGSIGDSSR-GSEETSRRPPSVKASLSVSFGQRAPHRAS 359
PVP+MR VANLEK LP+K +G GD++R GS++T+RRPPSVKA+LSVSFGQRAPHRAS
Sbjct: 158 PVPIMRQIVANLEKMKLPSKHAGVTGDTTRHGSDDTARRPPSVKAALSVSFGQRAPHRAS 217
Query: 360 TRDSSPIRRTIAPPP--YDKDGAN 425
TRDSSP+RRT+ PPP YD++ ++
Sbjct: 218 TRDSSPVRRTLPPPPPSYDRNSSD 241
Score = 69.7 bits (169), Expect = 2e-09
Identities = 36/63 (57%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Frame = +3
Query: 795 LDQQRTPPKDDSKEKKAVSSNLAKLKDLYGDLGSQKENVGDERAPNRDTSTEEVIRLGG- 971
+D + +P D SKEK + S+NLAKL+DLYGD G QK ER RD S EEVIRLGG
Sbjct: 371 IDHRSSPLADGSKEKTSASANLAKLRDLYGDTGDQKGGSAMERGSRRDNSGEEVIRLGGS 430
Query: 972 SWR 980
SW+
Sbjct: 431 SWK 433
>gb|EMS55224.1| hypothetical protein TRIUR3_33303 [Triticum urartu]
Length = 286
Score = 222 bits (566), Expect = 2e-55
Identities = 104/130 (80%), Positives = 116/130 (89%)
Frame = +3
Query: 3 GFLYLRYLADFKTLWSWYEPYLKDDEEFSPGSSGKMTTMGVYVRDLFLGQYYFDTLLPRI 182
GFLYLRY+AD K LW+WYEPYLKDDEEFSPGS+G+MTTMGVYVRDL LGQYYFD++LPR+
Sbjct: 98 GFLYLRYVADPKILWTWYEPYLKDDEEFSPGSNGRMTTMGVYVRDLILGQYYFDSILPRV 157
Query: 183 PVPVMRMTVANLEKRNLPTKPSGSIGDSSRGSEETSRRPPSVKASLSVSFGQRAPHRAST 362
PVPV+R NLEK LPTK SG GDS GSE+T+RRPPSVKASLSVSFGQRAPHRAST
Sbjct: 158 PVPVVRQVTTNLEKMKLPTKLSGVTGDSRHGSEDTARRPPSVKASLSVSFGQRAPHRAST 217
Query: 363 RDSSPIRRTI 392
RDSSP+RRT+
Sbjct: 218 RDSSPVRRTV 227
>ref|XP_003519321.1| PREDICTED: pre-mRNA-splicing factor 38B-like [Glycine max]
Length = 428
Score = 222 bits (565), Expect = 3e-55
Identities = 107/142 (75%), Positives = 127/142 (89%), Gaps = 1/142 (0%)
Frame = +3
Query: 3 GFLYLRYLADFKTLWSWYEPYLKDDEEFSPGSSGKMTTMGVYVRDLFLGQYYFDTLLPRI 182
GFLYLRY AD KTLW+W+EPY+KDDEEFSPGS+G+MTTMGVYVRDL LGQYYFDTL PRI
Sbjct: 98 GFLYLRYCADPKTLWNWFEPYVKDDEEFSPGSNGRMTTMGVYVRDLLLGQYYFDTLFPRI 157
Query: 183 PVPVMRMTVANLEKRNLPTKPSGSIGDSSR-GSEETSRRPPSVKASLSVSFGQRAPHRAS 359
PVPV+R V+NLEK LPT SGS G+++R GS++T+RRPPSVKA+LSVSFGQRAPHRAS
Sbjct: 158 PVPVLRQVVSNLEKLKLPTTHSGSTGETTRHGSDDTARRPPSVKAALSVSFGQRAPHRAS 217
Query: 360 TRDSSPIRRTIAPPPYDKDGAN 425
TRDSSPIRRT+ P ++K+G++
Sbjct: 218 TRDSSPIRRTL--PSHEKNGSD 237
Score = 64.7 bits (156), Expect = 8e-08
Identities = 31/66 (46%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Frame = +3
Query: 786 GISLDQQRTPPKDDSKEKKAVSSNLAKLKDLYGDLGSQKENVGDERAPNRDTSTEEVIRL 965
G + + R+ P+ + ++ + SSNLA+LKD+YGDLG K + ER P +D+ EEVIRL
Sbjct: 362 GTAQYESRSSPQREESKRTSASSNLAQLKDMYGDLGDNKGDANMERIPRKDSGGEEVIRL 421
Query: 966 GGS-WR 980
GGS W+
Sbjct: 422 GGSTWK 427