BLASTX nr result
ID: Atropa21_contig00001867
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00001867
(1358 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006346763.1| PREDICTED: pre-mRNA-splicing factor 38B-like... 273 2e-70
ref|XP_004236682.1| PREDICTED: uncharacterized protein LOC101266... 270 1e-69
gb|EOY03150.1| PRP38 family protein isoform 1 [Theobroma cacao] ... 234 8e-59
ref|NP_001190430.1| putative splicing factor ATSRL1 [Arabidopsis... 227 8e-57
ref|XP_002870520.1| hypothetical protein ARALYDRAFT_915852 [Arab... 227 8e-57
ref|NP_851101.1| putative splicing factor ATSRL1 [Arabidopsis th... 227 8e-57
ref|XP_006284038.1| hypothetical protein CARUB_v10005159mg [Caps... 226 2e-56
ref|XP_006405888.1| hypothetical protein EUTSA_v10027788mg [Eutr... 225 4e-56
ref|XP_004490796.1| PREDICTED: pre-mRNA-splicing factor 38B-like... 221 4e-55
ref|XP_002265636.1| PREDICTED: uncharacterized protein LOC100267... 221 7e-55
ref|XP_002528504.1| protein with unknown function [Ricinus commu... 219 3e-54
ref|XP_003616194.1| Pre-mRNA-splicing factor 38B [Medicago trunc... 216 2e-53
ref|XP_003631851.1| PREDICTED: uncharacterized protein LOC100267... 216 2e-53
emb|CBI28632.3| unnamed protein product [Vitis vinifera] 216 2e-53
ref|XP_002305255.1| pre-mRNA splicing factor PRP38 family protei... 214 7e-53
ref|XP_006384124.1| hypothetical protein POPTR_0004s07420g [Popu... 214 7e-53
gb|EMJ23582.1| hypothetical protein PRUPE_ppa006019mg [Prunus pe... 214 9e-53
ref|XP_003519321.1| PREDICTED: pre-mRNA-splicing factor 38B-like... 214 9e-53
ref|XP_006491725.1| PREDICTED: pre-mRNA-splicing factor 38B-like... 213 1e-52
ref|XP_006491724.1| PREDICTED: pre-mRNA-splicing factor 38B-like... 213 1e-52
>ref|XP_006346763.1| PREDICTED: pre-mRNA-splicing factor 38B-like [Solanum tuberosum]
Length = 430
Score = 273 bits (697), Expect = 2e-70
Identities = 135/157 (85%), Positives = 140/157 (89%)
Frame = +2
Query: 2 YLADFKTLWSWYEPYLKDDEEFTPGSSGKMTTMGVYVRDLFLGQYYFDTLLPRIPVPVMR 181
YL DFKTLW WYEPYLKDDEEF+PGSSG+MTTMGVYVRDLFLGQYYFDTLLPRIPVPV+R
Sbjct: 105 YLGDFKTLWGWYEPYLKDDEEFSPGSSGQMTTMGVYVRDLFLGQYYFDTLLPRIPVPVVR 164
Query: 182 TAVANLEKMNLPTKPSGSIGDSSRGSEETSRRPPSVKASLSVSFGQRAPHRASTRDSSPI 361
TAVA+LEKMNLPTK SGSIGDSSRGSEETSRRPPSVKASLSVSFGQRAPHRASTRDSSPI
Sbjct: 165 TAVASLEKMNLPTKLSGSIGDSSRGSEETSRRPPSVKASLSVSFGQRAPHRASTRDSSPI 224
Query: 362 RRTIAPPPYDKDGADDXXXXXXXXXXXXCDLSDRENS 472
RRTIAPPPYDKDGA+ DLSDRENS
Sbjct: 225 RRTIAPPPYDKDGANGSRRSPSMRRSQSRDLSDRENS 261
Score = 131 bits (330), Expect = 6e-28
Identities = 65/70 (92%), Positives = 66/70 (94%), Gaps = 1/70 (1%)
Frame = +2
Query: 767 LHDQGTSLDQQRTPPRDESKEKKAVSSNLAKLKDLYGDFGNQKENVGDDRAPNRDTSTEE 946
LHDQGTSLDQQRTPPRDESKEKKA SNLAKLKDLYGDFGN+KENVGD RAPNRDTSTEE
Sbjct: 361 LHDQGTSLDQQRTPPRDESKEKKAAPSNLAKLKDLYGDFGNKKENVGDGRAPNRDTSTEE 420
Query: 947 VIRLGGS-WR 973
VIRLGGS WR
Sbjct: 421 VIRLGGSTWR 430
>ref|XP_004236682.1| PREDICTED: uncharacterized protein LOC101266210 [Solanum
lycopersicum]
Length = 444
Score = 270 bits (689), Expect = 1e-69
Identities = 134/157 (85%), Positives = 139/157 (88%)
Frame = +2
Query: 2 YLADFKTLWSWYEPYLKDDEEFTPGSSGKMTTMGVYVRDLFLGQYYFDTLLPRIPVPVMR 181
YL DFKTLW WYEPYLKDDEEF+PGSSG+MTTMGVYVRDLFLGQYYFDTLLPRIPVPV+R
Sbjct: 105 YLGDFKTLWGWYEPYLKDDEEFSPGSSGQMTTMGVYVRDLFLGQYYFDTLLPRIPVPVVR 164
Query: 182 TAVANLEKMNLPTKPSGSIGDSSRGSEETSRRPPSVKASLSVSFGQRAPHRASTRDSSPI 361
TAVA+LEKMNLPTK SGSIGDSSRGSEETSRRPPSVKASLSVSFGQRAPHRASTRDSSPI
Sbjct: 165 TAVASLEKMNLPTKLSGSIGDSSRGSEETSRRPPSVKASLSVSFGQRAPHRASTRDSSPI 224
Query: 362 RRTIAPPPYDKDGADDXXXXXXXXXXXXCDLSDRENS 472
RRTIAPP YDKDGA+ DLSDRENS
Sbjct: 225 RRTIAPPSYDKDGANGSRRSPSMRRSQSRDLSDRENS 261
Score = 134 bits (336), Expect = 1e-28
Identities = 65/70 (92%), Positives = 67/70 (95%), Gaps = 1/70 (1%)
Frame = +2
Query: 767 LHDQGTSLDQQRTPPRDESKEKKAVSSNLAKLKDLYGDFGNQKENVGDDRAPNRDTSTEE 946
LHDQGT LDQQRTPPRDESKEKKA SSNLAKLKDLYGDFGN+KEN+GDDRAPNRDTSTEE
Sbjct: 375 LHDQGTRLDQQRTPPRDESKEKKAASSNLAKLKDLYGDFGNKKENIGDDRAPNRDTSTEE 434
Query: 947 VIRLGGS-WR 973
VIRLGGS WR
Sbjct: 435 VIRLGGSTWR 444
>gb|EOY03150.1| PRP38 family protein isoform 1 [Theobroma cacao]
gi|508711254|gb|EOY03151.1| PRP38 family protein isoform
1 [Theobroma cacao]
Length = 446
Score = 234 bits (596), Expect = 8e-59
Identities = 111/158 (70%), Positives = 131/158 (82%), Gaps = 1/158 (0%)
Frame = +2
Query: 2 YLADFKTLWSWYEPYLKDDEEFTPGSSGKMTTMGVYVRDLFLGQYYFDTLLPRIPVPVMR 181
Y AD KTLW+W+EPY+KD+EEF PGS+G+MTTMGVYVRDL LGQYYFDTL PRIPVPV+R
Sbjct: 104 YAADPKTLWTWFEPYIKDEEEFPPGSNGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLR 163
Query: 182 TAVANLEKMNLPTKPSGSIGDSSR-GSEETSRRPPSVKASLSVSFGQRAPHRASTRDSSP 358
V+NLEKM LPTKPSG+ GDS+R GS++T+RRPPSVKA+LSVSFGQRAPHRASTRDSSP
Sbjct: 164 QVVSNLEKMKLPTKPSGATGDSNRHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSP 223
Query: 359 IRRTIAPPPYDKDGADDXXXXXXXXXXXXCDLSDRENS 472
+RR++ PPPYD+ G+DD + SDRE S
Sbjct: 224 VRRSLPPPPYDRSGSDDLKRSPSHRRSQSREYSDREYS 261
Score = 73.6 bits (179), Expect = 2e-10
Identities = 38/62 (61%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Frame = +2
Query: 791 DQQRTPPRDESKEKKAVSSNLAKLKDLYGDFGNQKENVGDDRAPNRDTSTEEVIRLGGS- 967
D+ +PP++ SKEK + SSNLAKLKDLYGD +QK + G +R P RD S EEVIRLGGS
Sbjct: 386 DRHSSPPKEGSKEKTSASSNLAKLKDLYGDLSDQKGD-GFERVPRRDNSGEEVIRLGGST 444
Query: 968 WR 973
W+
Sbjct: 445 WK 446
>ref|NP_001190430.1| putative splicing factor ATSRL1 [Arabidopsis thaliana]
gi|332006793|gb|AED94176.1| putative splicing factor
ATSRL1 [Arabidopsis thaliana]
Length = 338
Score = 227 bits (579), Expect = 8e-57
Identities = 109/138 (78%), Positives = 123/138 (89%), Gaps = 2/138 (1%)
Frame = +2
Query: 2 YLADFKTLWSWYEPYLKDDEEFTPGSSGKMTTMGVYVRDLFLGQYYFDTLLPRIPVPVMR 181
Y+AD KTLW+WYEPY+KDDEEF+PGS+G+MTTMGVYVRDL LG YYFDTL PRIPVPVMR
Sbjct: 50 YVADAKTLWTWYEPYIKDDEEFSPGSNGRMTTMGVYVRDLLLGLYYFDTLFPRIPVPVMR 109
Query: 182 TAVANLEKMNLPTKPSGSIGDSSRGSEETSRRPPSVKASLSVSFGQRAPHRASTRDSSPI 361
V+NLEKMNLPTKPSGS GD +RGSE+T+RRPPSVKASLSVSFGQRAPHRASTR SSP+
Sbjct: 110 QIVSNLEKMNLPTKPSGSTGDMTRGSEDTARRPPSVKASLSVSFGQRAPHRASTRGSSPV 169
Query: 362 RRTIAPPP--YDKDGADD 409
RR PPP YD++G D+
Sbjct: 170 RR---PPPTGYDRNGGDE 184
Score = 61.2 bits (147), Expect = 1e-06
Identities = 34/70 (48%), Positives = 49/70 (70%), Gaps = 4/70 (5%)
Frame = +2
Query: 776 QGTSLDQQRTPPRDESKEKKA---VSSNLAKLKDLYGDFGNQKENVGDDRAPNRDTSTEE 946
+ ++++ TP RD S ++K+ V+SNLAKLKDLYGD +QK + G +D+S+EE
Sbjct: 271 RSVQIEREPTPKRDSSNKEKSAVTVNSNLAKLKDLYGDASSQKRDEG--FGTRKDSSSEE 328
Query: 947 VIRLGG-SWR 973
VI+LGG SWR
Sbjct: 329 VIKLGGSSWR 338
>ref|XP_002870520.1| hypothetical protein ARALYDRAFT_915852 [Arabidopsis lyrata subsp.
lyrata] gi|297316356|gb|EFH46779.1| hypothetical protein
ARALYDRAFT_915852 [Arabidopsis lyrata subsp. lyrata]
Length = 395
Score = 227 bits (579), Expect = 8e-57
Identities = 109/138 (78%), Positives = 123/138 (89%), Gaps = 2/138 (1%)
Frame = +2
Query: 2 YLADFKTLWSWYEPYLKDDEEFTPGSSGKMTTMGVYVRDLFLGQYYFDTLLPRIPVPVMR 181
Y+AD KTLW+WYEPY+KDDEEF+PGS+G+MTTMGVYVRDL LG YYFDTL PRIPVPVMR
Sbjct: 105 YVADAKTLWTWYEPYIKDDEEFSPGSNGRMTTMGVYVRDLLLGLYYFDTLFPRIPVPVMR 164
Query: 182 TAVANLEKMNLPTKPSGSIGDSSRGSEETSRRPPSVKASLSVSFGQRAPHRASTRDSSPI 361
V+NLEKMNLPTKPSGS GD +RGSE+T+RRPPSVKASLSVSFGQRAPHRASTR SSP+
Sbjct: 165 QIVSNLEKMNLPTKPSGSTGDMTRGSEDTARRPPSVKASLSVSFGQRAPHRASTRGSSPV 224
Query: 362 RRTIAPPP--YDKDGADD 409
RR PPP YD++G D+
Sbjct: 225 RR---PPPSGYDRNGGDE 239
>ref|NP_851101.1| putative splicing factor ATSRL1 [Arabidopsis thaliana]
gi|20260634|gb|AAM13215.1| unknown protein [Arabidopsis
thaliana] gi|31711878|gb|AAP68295.1| At5g37370
[Arabidopsis thaliana] gi|332006790|gb|AED94173.1|
putative splicing factor ATSRL1 [Arabidopsis thaliana]
Length = 393
Score = 227 bits (579), Expect = 8e-57
Identities = 109/138 (78%), Positives = 123/138 (89%), Gaps = 2/138 (1%)
Frame = +2
Query: 2 YLADFKTLWSWYEPYLKDDEEFTPGSSGKMTTMGVYVRDLFLGQYYFDTLLPRIPVPVMR 181
Y+AD KTLW+WYEPY+KDDEEF+PGS+G+MTTMGVYVRDL LG YYFDTL PRIPVPVMR
Sbjct: 105 YVADAKTLWTWYEPYIKDDEEFSPGSNGRMTTMGVYVRDLLLGLYYFDTLFPRIPVPVMR 164
Query: 182 TAVANLEKMNLPTKPSGSIGDSSRGSEETSRRPPSVKASLSVSFGQRAPHRASTRDSSPI 361
V+NLEKMNLPTKPSGS GD +RGSE+T+RRPPSVKASLSVSFGQRAPHRASTR SSP+
Sbjct: 165 QIVSNLEKMNLPTKPSGSTGDMTRGSEDTARRPPSVKASLSVSFGQRAPHRASTRGSSPV 224
Query: 362 RRTIAPPP--YDKDGADD 409
RR PPP YD++G D+
Sbjct: 225 RR---PPPTGYDRNGGDE 239
Score = 61.2 bits (147), Expect = 1e-06
Identities = 34/70 (48%), Positives = 49/70 (70%), Gaps = 4/70 (5%)
Frame = +2
Query: 776 QGTSLDQQRTPPRDESKEKKA---VSSNLAKLKDLYGDFGNQKENVGDDRAPNRDTSTEE 946
+ ++++ TP RD S ++K+ V+SNLAKLKDLYGD +QK + G +D+S+EE
Sbjct: 326 RSVQIEREPTPKRDSSNKEKSAVTVNSNLAKLKDLYGDASSQKRDEG--FGTRKDSSSEE 383
Query: 947 VIRLGG-SWR 973
VI+LGG SWR
Sbjct: 384 VIKLGGSSWR 393
>ref|XP_006284038.1| hypothetical protein CARUB_v10005159mg [Capsella rubella]
gi|482552743|gb|EOA16936.1| hypothetical protein
CARUB_v10005159mg [Capsella rubella]
Length = 349
Score = 226 bits (576), Expect = 2e-56
Identities = 108/138 (78%), Positives = 122/138 (88%), Gaps = 2/138 (1%)
Frame = +2
Query: 2 YLADFKTLWSWYEPYLKDDEEFTPGSSGKMTTMGVYVRDLFLGQYYFDTLLPRIPVPVMR 181
Y+AD KTLW+WYEPY+ DDEEF+PGS+G+MTTMGVY+RDL LG YYFDTL PRIPVPVMR
Sbjct: 50 YVADSKTLWTWYEPYINDDEEFSPGSNGRMTTMGVYIRDLLLGLYYFDTLFPRIPVPVMR 109
Query: 182 TAVANLEKMNLPTKPSGSIGDSSRGSEETSRRPPSVKASLSVSFGQRAPHRASTRDSSPI 361
V+NLEKMNLPTKPSGS GD SRGSE+T+RRPPSVKASLSVSFGQRAPHRASTR SSP+
Sbjct: 110 QIVSNLEKMNLPTKPSGSTGDMSRGSEDTARRPPSVKASLSVSFGQRAPHRASTRGSSPV 169
Query: 362 RRTIAPPP--YDKDGADD 409
RR PPP YD++G D+
Sbjct: 170 RR---PPPSGYDRNGGDE 184
>ref|XP_006405888.1| hypothetical protein EUTSA_v10027788mg [Eutrema salsugineum]
gi|557107026|gb|ESQ47341.1| hypothetical protein
EUTSA_v10027788mg [Eutrema salsugineum]
Length = 403
Score = 225 bits (573), Expect = 4e-56
Identities = 108/138 (78%), Positives = 121/138 (87%), Gaps = 2/138 (1%)
Frame = +2
Query: 2 YLADFKTLWSWYEPYLKDDEEFTPGSSGKMTTMGVYVRDLFLGQYYFDTLLPRIPVPVMR 181
Y+AD KTLW+WYEPY+KDDEEF PGS+G+MTTMGVYVRDL LG YYFDTL PRIPVPVMR
Sbjct: 105 YVADAKTLWTWYEPYIKDDEEFAPGSNGRMTTMGVYVRDLLLGLYYFDTLFPRIPVPVMR 164
Query: 182 TAVANLEKMNLPTKPSGSIGDSSRGSEETSRRPPSVKASLSVSFGQRAPHRASTRDSSPI 361
V+NLEKMNLPTKPSGS GD +RGS++T+RRPPSVKASLSVSFGQRAPHRASTR SSP+
Sbjct: 165 QIVSNLEKMNLPTKPSGSTGDMTRGSDDTARRPPSVKASLSVSFGQRAPHRASTRGSSPV 224
Query: 362 RRTIAPPP--YDKDGADD 409
RR PPP YD +G D+
Sbjct: 225 RR---PPPSGYDSNGGDE 239
Score = 62.8 bits (151), Expect = 3e-07
Identities = 36/66 (54%), Positives = 47/66 (71%), Gaps = 4/66 (6%)
Frame = +2
Query: 788 LDQQRTPPRDESKEKKA---VSSNLAKLKDLYGDFGNQKENVGDDRAPNRDTSTEEVIRL 958
++++ TP RD S +K+ V+SNLAKLKDLYGD NQK + G RD+S+EEVI+L
Sbjct: 340 IEREPTPKRDNSNREKSAVTVNSNLAKLKDLYGDASNQKGDEG--FGTRRDSSSEEVIKL 397
Query: 959 GG-SWR 973
GG SWR
Sbjct: 398 GGSSWR 403
>ref|XP_004490796.1| PREDICTED: pre-mRNA-splicing factor 38B-like [Cicer arietinum]
Length = 434
Score = 221 bits (564), Expect = 4e-55
Identities = 103/137 (75%), Positives = 124/137 (90%), Gaps = 1/137 (0%)
Frame = +2
Query: 2 YLADFKTLWSWYEPYLKDDEEFTPGSSGKMTTMGVYVRDLFLGQYYFDTLLPRIPVPVMR 181
Y+AD KTLW+WYEPY KDDEEF+PGS+G+MTTMGVY+RDL LGQYYFDTL PRIPVPVMR
Sbjct: 104 YVADPKTLWNWYEPYAKDDEEFSPGSNGRMTTMGVYIRDLLLGQYYFDTLFPRIPVPVMR 163
Query: 182 TAVANLEKMNLPTKPSGSIGDSSR-GSEETSRRPPSVKASLSVSFGQRAPHRASTRDSSP 358
V+NLEK+ LP SG+ G+++R GS++T+RRPPSVKA+LSVSFGQRAPHRASTRDSSP
Sbjct: 164 QVVSNLEKLKLPITHSGTTGETTRHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSP 223
Query: 359 IRRTIAPPPYDKDGADD 409
IRRT+APPP++K+ +DD
Sbjct: 224 IRRTLAPPPHEKNVSDD 240
Score = 70.1 bits (170), Expect = 2e-09
Identities = 35/66 (53%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Frame = +2
Query: 779 GTSLDQQRTPPRDESKEKKAVSSNLAKLKDLYGDFGNQKENVGDDRAPNRDTSTEEVIRL 958
GT+ R+ P+ + +K + SSNLAKLKDLYGD GN K + +R P RD EEVIRL
Sbjct: 368 GTARYDSRSSPQRDGSKKTSASSNLAKLKDLYGDLGNSKGDANVERIPRRDNGGEEVIRL 427
Query: 959 GG-SWR 973
GG SW+
Sbjct: 428 GGSSWK 433
>ref|XP_002265636.1| PREDICTED: uncharacterized protein LOC100267328 isoform 1 [Vitis
vinifera]
Length = 433
Score = 221 bits (562), Expect = 7e-55
Identities = 107/160 (66%), Positives = 129/160 (80%), Gaps = 3/160 (1%)
Frame = +2
Query: 2 YLADFKTLWSWYEPYLKDDEEFTPGSSGKMTTMGVYVRDLFLGQYYFDTLLPRIPVPVMR 181
Y D KTLW+W+EPY+KD+EEF+PGS+G+MTTMG YVRDL LGQYYFDTL PRIPVP+MR
Sbjct: 104 YAGDPKTLWNWFEPYVKDEEEFSPGSTGRMTTMGAYVRDLLLGQYYFDTLFPRIPVPIMR 163
Query: 182 TAVANLEKMNLPTKPSGSIGDSSR-GSEETSRRPPSVKASLSVSFGQRAPHRASTRDSSP 358
VANLEKM LP+K +G GD++R GS++T+RRPPSVKA+LSVSFGQRAPHRASTRDSSP
Sbjct: 164 QIVANLEKMKLPSKHAGVTGDTTRHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSP 223
Query: 359 IRRTIAPPP--YDKDGADDXXXXXXXXXXXXCDLSDRENS 472
+RRT+ PPP YD++ +DD +LSDRE S
Sbjct: 224 VRRTLPPPPPSYDRNSSDDLRRSPSSRRSQSRELSDREYS 263
Score = 68.6 bits (166), Expect = 6e-09
Identities = 36/70 (51%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Frame = +2
Query: 767 LHDQGTSLDQQRTPPRDESKEKKAVSSNLAKLKDLYGDFGNQKENVGDDRAPNRDTSTEE 946
L + +D + +P D SKEK + S+NLAKL+DLYGD G+QK +R RD S EE
Sbjct: 364 LQARNDHIDHRSSPLADGSKEKTSASANLAKLRDLYGDTGDQKGGSAMERGSRRDNSGEE 423
Query: 947 VIRLGG-SWR 973
VIRLGG SW+
Sbjct: 424 VIRLGGSSWK 433
>ref|XP_002528504.1| protein with unknown function [Ricinus communis]
gi|223532064|gb|EEF33873.1| protein with unknown
function [Ricinus communis]
Length = 418
Score = 219 bits (557), Expect = 3e-54
Identities = 110/160 (68%), Positives = 129/160 (80%), Gaps = 3/160 (1%)
Frame = +2
Query: 2 YLADFKTLWSWYEPYLKDDEEFTPGSSGKMTTMGVYVRDLFLGQYYFDTLLPRIPVPVMR 181
Y AD KTLW+W EPY+KDDEEF+PGS+G+ TTMGVYVRDL LGQYYFDTL PRIPVPVMR
Sbjct: 104 YAADAKTLWNWCEPYIKDDEEFSPGSNGRNTTMGVYVRDLLLGQYYFDTLFPRIPVPVMR 163
Query: 182 TAVANLEKMNLPTKPSGSIGDSSR-GSEETSRRPPSVKASLSVSFGQRAPHRASTRDSSP 358
V+NLEKM LPTKPSG+ GD+ R GS++T+RRPPSVKA+LSVSFGQRAPHRASTRDSSP
Sbjct: 164 QIVSNLEKMKLPTKPSGATGDAVRHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSP 223
Query: 359 IRRTIAPPP--YDKDGADDXXXXXXXXXXXXCDLSDRENS 472
+RRTI PPP Y+++ +DD + SD+E S
Sbjct: 224 VRRTIPPPPSSYERN-SDDPRRSPRSRRSQSREYSDKEYS 262
Score = 71.6 bits (174), Expect = 7e-10
Identities = 37/63 (58%), Positives = 48/63 (76%), Gaps = 2/63 (3%)
Frame = +2
Query: 791 DQQRTPPRDESKEKK-AVSSNLAKLKDLYGDFGNQKENVGDDRAPNRDTSTEEVIRLGGS 967
D+ +P RD KEK+ + SSNLAKLKDLYGD +Q+ + G +RAP RD S+EE+IRLGGS
Sbjct: 356 DRHSSPYRDGGKEKRTSASSNLAKLKDLYGDLSDQRGDGGVERAPRRDDSSEEIIRLGGS 415
Query: 968 -WR 973
W+
Sbjct: 416 TWK 418
>ref|XP_003616194.1| Pre-mRNA-splicing factor 38B [Medicago truncatula]
gi|355517529|gb|AES99152.1| Pre-mRNA-splicing factor 38B
[Medicago truncatula]
Length = 433
Score = 216 bits (550), Expect = 2e-53
Identities = 103/137 (75%), Positives = 121/137 (88%), Gaps = 1/137 (0%)
Frame = +2
Query: 2 YLADFKTLWSWYEPYLKDDEEFTPGSSGKMTTMGVYVRDLFLGQYYFDTLLPRIPVPVMR 181
Y AD KTLWSW+EPY KDDEEF+PGS+G+MTTMGVY+RDL LGQYYFDTL PRIPVPVMR
Sbjct: 104 YYADPKTLWSWFEPYAKDDEEFSPGSNGRMTTMGVYIRDLLLGQYYFDTLFPRIPVPVMR 163
Query: 182 TAVANLEKMNLPTKPSGSIGDSSR-GSEETSRRPPSVKASLSVSFGQRAPHRASTRDSSP 358
VANLEK+ LPT G+ G+++R GS++T+RRPPSVKA+LSVSFGQRAPHRASTRDSSP
Sbjct: 164 QVVANLEKLKLPTTHCGTTGETTRHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSP 223
Query: 359 IRRTIAPPPYDKDGADD 409
IRRT+ P P++K+G DD
Sbjct: 224 IRRTV-PAPHEKNGTDD 239
Score = 70.1 bits (170), Expect = 2e-09
Identities = 35/66 (53%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Frame = +2
Query: 779 GTSLDQQRTPPRDESKEKKAVSSNLAKLKDLYGDFGNQKENVGDDRAPNRDTSTEEVIRL 958
GT+ R+ P+ + +K + SSNLAKLKDLYGD G K + +R P RD S EEVIRL
Sbjct: 367 GTARHDSRSSPQRDGSKKTSASSNLAKLKDLYGDLGESKGDANMERIPRRDNSGEEVIRL 426
Query: 959 GG-SWR 973
GG SW+
Sbjct: 427 GGSSWK 432
>ref|XP_003631851.1| PREDICTED: uncharacterized protein LOC100267328 isoform 2 [Vitis
vinifera]
Length = 407
Score = 216 bits (549), Expect = 2e-53
Identities = 101/139 (72%), Positives = 122/139 (87%), Gaps = 3/139 (2%)
Frame = +2
Query: 2 YLADFKTLWSWYEPYLKDDEEFTPGSSGKMTTMGVYVRDLFLGQYYFDTLLPRIPVPVMR 181
Y D KTLW+W+EPY+KD+EEF+PGS+G+MTTMG YVRDL LGQYYFDTL PRIPVP+MR
Sbjct: 104 YAGDPKTLWNWFEPYVKDEEEFSPGSTGRMTTMGAYVRDLLLGQYYFDTLFPRIPVPIMR 163
Query: 182 TAVANLEKMNLPTKPSGSIGDSSR-GSEETSRRPPSVKASLSVSFGQRAPHRASTRDSSP 358
VANLEKM LP+K +G GD++R GS++T+RRPPSVKA+LSVSFGQRAPHRASTRDSSP
Sbjct: 164 QIVANLEKMKLPSKHAGVTGDTTRHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSP 223
Query: 359 IRRTIAPPP--YDKDGADD 409
+RRT+ PPP YD++ +DD
Sbjct: 224 VRRTLPPPPPSYDRNSSDD 242
Score = 68.6 bits (166), Expect = 6e-09
Identities = 36/70 (51%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Frame = +2
Query: 767 LHDQGTSLDQQRTPPRDESKEKKAVSSNLAKLKDLYGDFGNQKENVGDDRAPNRDTSTEE 946
L + +D + +P D SKEK + S+NLAKL+DLYGD G+QK +R RD S EE
Sbjct: 338 LQARNDHIDHRSSPLADGSKEKTSASANLAKLRDLYGDTGDQKGGSAMERGSRRDNSGEE 397
Query: 947 VIRLGG-SWR 973
VIRLGG SW+
Sbjct: 398 VIRLGGSSWK 407
>emb|CBI28632.3| unnamed protein product [Vitis vinifera]
Length = 383
Score = 216 bits (549), Expect = 2e-53
Identities = 101/139 (72%), Positives = 122/139 (87%), Gaps = 3/139 (2%)
Frame = +2
Query: 2 YLADFKTLWSWYEPYLKDDEEFTPGSSGKMTTMGVYVRDLFLGQYYFDTLLPRIPVPVMR 181
Y D KTLW+W+EPY+KD+EEF+PGS+G+MTTMG YVRDL LGQYYFDTL PRIPVP+MR
Sbjct: 104 YAGDPKTLWNWFEPYVKDEEEFSPGSTGRMTTMGAYVRDLLLGQYYFDTLFPRIPVPIMR 163
Query: 182 TAVANLEKMNLPTKPSGSIGDSSR-GSEETSRRPPSVKASLSVSFGQRAPHRASTRDSSP 358
VANLEKM LP+K +G GD++R GS++T+RRPPSVKA+LSVSFGQRAPHRASTRDSSP
Sbjct: 164 QIVANLEKMKLPSKHAGVTGDTTRHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSP 223
Query: 359 IRRTIAPPP--YDKDGADD 409
+RRT+ PPP YD++ +DD
Sbjct: 224 VRRTLPPPPPSYDRNSSDD 242
Score = 62.0 bits (149), Expect = 6e-07
Identities = 32/52 (61%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Frame = +2
Query: 821 SKEKKAVSSNLAKLKDLYGDFGNQKENVGDDRAPNRDTSTEEVIRLGG-SWR 973
SKEK + S+NLAKL+DLYGD G+QK +R RD S EEVIRLGG SW+
Sbjct: 332 SKEKTSASANLAKLRDLYGDTGDQKGGSAMERGSRRDNSGEEVIRLGGSSWK 383
>ref|XP_002305255.1| pre-mRNA splicing factor PRP38 family protein [Populus trichocarpa]
gi|222848219|gb|EEE85766.1| pre-mRNA splicing factor
PRP38 family protein [Populus trichocarpa]
Length = 397
Score = 214 bits (545), Expect = 7e-53
Identities = 103/156 (66%), Positives = 121/156 (77%), Gaps = 1/156 (0%)
Frame = +2
Query: 2 YLADFKTLWSWYEPYLKDDEEFTPGSSGKMTTMGVYVRDLFLGQYYFDTLLPRIPVPVMR 181
Y D KTLW+W+EPY+KDDEEF+PGSSG+ TT+G+YVRDL LGQYYFDTL PRIPVPV+R
Sbjct: 104 YAGDPKTLWNWFEPYIKDDEEFSPGSSGRKTTIGIYVRDLLLGQYYFDTLFPRIPVPVLR 163
Query: 182 TAVANLEKMNLPTKPSGSIGDSSR-GSEETSRRPPSVKASLSVSFGQRAPHRASTRDSSP 358
ANLE M LPTK SGS GD +R GS++T+RRPPSVKA+LSVSFGQRAPHRASTRDSSP
Sbjct: 164 QITANLEMMKLPTKISGSTGDGNRHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSP 223
Query: 359 IRRTIAPPPYDKDGADDXXXXXXXXXXXXCDLSDRE 466
+RRT+ PP YD+ D + SDR+
Sbjct: 224 VRRTLPPPSYDRTSDDPRSHRSQSREYSDKEYSDRD 259
Score = 79.3 bits (194), Expect = 3e-12
Identities = 42/67 (62%), Positives = 48/67 (71%), Gaps = 2/67 (2%)
Frame = +2
Query: 779 GTS-LDQQRTPPRDESKEKKAVSSNLAKLKDLYGDFGNQKENVGDDRAPNRDTSTEEVIR 955
GTS DQ TP RD SK++ + SSNLAKLKDLYGD G+QK + G +R P RD EEV R
Sbjct: 331 GTSPFDQHPTPQRDGSKDRTSASSNLAKLKDLYGDLGDQKGDAGLERGPRRDNDGEEVFR 390
Query: 956 LGGS-WR 973
LGGS WR
Sbjct: 391 LGGSTWR 397
>ref|XP_006384124.1| hypothetical protein POPTR_0004s07420g [Populus trichocarpa]
gi|118481208|gb|ABK92555.1| unknown [Populus
trichocarpa] gi|550340532|gb|ERP61921.1| hypothetical
protein POPTR_0004s07420g [Populus trichocarpa]
Length = 427
Score = 214 bits (545), Expect = 7e-53
Identities = 103/156 (66%), Positives = 121/156 (77%), Gaps = 1/156 (0%)
Frame = +2
Query: 2 YLADFKTLWSWYEPYLKDDEEFTPGSSGKMTTMGVYVRDLFLGQYYFDTLLPRIPVPVMR 181
Y D KTLW+W+EPY+KDDEEF+PGSSG+ TT+G+YVRDL LGQYYFDTL PRIPVPV+R
Sbjct: 104 YAGDPKTLWNWFEPYIKDDEEFSPGSSGRKTTIGIYVRDLLLGQYYFDTLFPRIPVPVLR 163
Query: 182 TAVANLEKMNLPTKPSGSIGDSSR-GSEETSRRPPSVKASLSVSFGQRAPHRASTRDSSP 358
ANLE M LPTK SGS GD +R GS++T+RRPPSVKA+LSVSFGQRAPHRASTRDSSP
Sbjct: 164 QITANLEMMKLPTKISGSTGDGNRHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSP 223
Query: 359 IRRTIAPPPYDKDGADDXXXXXXXXXXXXCDLSDRE 466
+RRT+ PP YD+ D + SDR+
Sbjct: 224 VRRTLPPPSYDRTSDDPRSHRSQSREYSDKEYSDRD 259
Score = 79.3 bits (194), Expect = 3e-12
Identities = 42/67 (62%), Positives = 48/67 (71%), Gaps = 2/67 (2%)
Frame = +2
Query: 779 GTS-LDQQRTPPRDESKEKKAVSSNLAKLKDLYGDFGNQKENVGDDRAPNRDTSTEEVIR 955
GTS DQ TP RD SK++ + SSNLAKLKDLYGD G+QK + G +R P RD EEV R
Sbjct: 361 GTSPFDQHPTPQRDGSKDRTSASSNLAKLKDLYGDLGDQKGDAGLERGPRRDNDGEEVFR 420
Query: 956 LGGS-WR 973
LGGS WR
Sbjct: 421 LGGSTWR 427
>gb|EMJ23582.1| hypothetical protein PRUPE_ppa006019mg [Prunus persica]
Length = 432
Score = 214 bits (544), Expect = 9e-53
Identities = 103/138 (74%), Positives = 121/138 (87%), Gaps = 2/138 (1%)
Frame = +2
Query: 2 YLADFKTLWSWYEPYLKDDEEFTPGSSGKMTTMGVYVRDLFLGQYYFDTLLPRIPVPVMR 181
Y AD KTLW+W EPY+KD+EEF+PGS+G+ TTMGVYVRDL LGQYYFDTL PRIPVPV+R
Sbjct: 104 YAADPKTLWNWVEPYIKDEEEFSPGSNGRTTTMGVYVRDLLLGQYYFDTLFPRIPVPVLR 163
Query: 182 TAVANLEKMNLPTKPSGSIGDSSR-GSEETSRRPPSVKASLSVSFGQRAPHRASTRDSSP 358
VA+LEKM LPTK SG G+++R GS++T+RRPPSVKA+LSVSFGQRAPHRASTRDSSP
Sbjct: 164 QIVAHLEKMKLPTKLSGITGEATRHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSP 223
Query: 359 IRRTI-APPPYDKDGADD 409
+RRT+ PPPYDK +DD
Sbjct: 224 VRRTLPPPPPYDKASSDD 241
Score = 61.6 bits (148), Expect = 7e-07
Identities = 31/58 (53%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = +2
Query: 803 TPPRDESKEKKAVSSNLAKLKDLYGDFGNQKENVGDDRAPNRDTSTEEVIRLGGS-WR 973
+P RD +K++ + SSNLAKL+DLYGD QK + DR D EEVIRLGGS W+
Sbjct: 375 SPQRDVNKDRTSASSNLAKLRDLYGDISEQKGDASMDRISRIDNGGEEVIRLGGSRWK 432
>ref|XP_003519321.1| PREDICTED: pre-mRNA-splicing factor 38B-like [Glycine max]
Length = 428
Score = 214 bits (544), Expect = 9e-53
Identities = 102/137 (74%), Positives = 123/137 (89%), Gaps = 1/137 (0%)
Frame = +2
Query: 2 YLADFKTLWSWYEPYLKDDEEFTPGSSGKMTTMGVYVRDLFLGQYYFDTLLPRIPVPVMR 181
Y AD KTLW+W+EPY+KDDEEF+PGS+G+MTTMGVYVRDL LGQYYFDTL PRIPVPV+R
Sbjct: 104 YCADPKTLWNWFEPYVKDDEEFSPGSNGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLR 163
Query: 182 TAVANLEKMNLPTKPSGSIGDSSR-GSEETSRRPPSVKASLSVSFGQRAPHRASTRDSSP 358
V+NLEK+ LPT SGS G+++R GS++T+RRPPSVKA+LSVSFGQRAPHRASTRDSSP
Sbjct: 164 QVVSNLEKLKLPTTHSGSTGETTRHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSP 223
Query: 359 IRRTIAPPPYDKDGADD 409
IRRT+ P ++K+G+DD
Sbjct: 224 IRRTL--PSHEKNGSDD 238
Score = 65.9 bits (159), Expect = 4e-08
Identities = 31/66 (46%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Frame = +2
Query: 779 GTSLDQQRTPPRDESKEKKAVSSNLAKLKDLYGDFGNQKENVGDDRAPNRDTSTEEVIRL 958
GT+ + R+ P+ E ++ + SSNLA+LKD+YGD G+ K + +R P +D+ EEVIRL
Sbjct: 362 GTAQYESRSSPQREESKRTSASSNLAQLKDMYGDLGDNKGDANMERIPRKDSGGEEVIRL 421
Query: 959 GGS-WR 973
GGS W+
Sbjct: 422 GGSTWK 427
>ref|XP_006491725.1| PREDICTED: pre-mRNA-splicing factor 38B-like isoform X2 [Citrus
sinensis]
Length = 383
Score = 213 bits (543), Expect = 1e-52
Identities = 104/157 (66%), Positives = 126/157 (80%), Gaps = 2/157 (1%)
Frame = +2
Query: 2 YLADFKTLWSWYEPYLKDDEEFTPGSSGKMTTMGVYVRDLFLGQYYFDTLLPRIPVPVMR 181
Y AD KTLW+W+E YLKD+EEF+PGS+G++TTMGVYVRDL LGQYYFDTL PRIPVPV+R
Sbjct: 50 YAADPKTLWNWFEQYLKDEEEFSPGSNGRVTTMGVYVRDLLLGQYYFDTLFPRIPVPVLR 109
Query: 182 TAVANLEKMNLPTKPSGSIGDSSR-GSEETSRRPPSVKASLSVSFGQRAPHRASTRDSSP 358
+ NLEKM LP+K SG GD++R GS++T+RRPPSVKA+LSVSFGQRAPHRASTRDSSP
Sbjct: 110 QIIINLEKMKLPSKHSGVTGDTNRYGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSP 169
Query: 359 IRRTIAPPP-YDKDGADDXXXXXXXXXXXXCDLSDRE 466
+RRT+ PPP YD+ ++D + SDRE
Sbjct: 170 VRRTLPPPPMYDRASSEDLRRSPRNRRSSSHEYSDRE 206
Score = 73.9 bits (180), Expect = 1e-10
Identities = 37/63 (58%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Frame = +2
Query: 788 LDQQRTPPRDESKEKKAVSSNLAKLKDLYGDFGNQKENVGDDRAPNRDTSTEEVIRLGG- 964
+D+ +P D +KEK + SSNLAKLKDLYGD +QKE G +R RDT+ EEVIRLGG
Sbjct: 321 IDRDPSPQTDGNKEKTSASSNLAKLKDLYGDVSDQKEVAGPERIARRDTNDEEVIRLGGS 380
Query: 965 SWR 973
SW+
Sbjct: 381 SWK 383
>ref|XP_006491724.1| PREDICTED: pre-mRNA-splicing factor 38B-like isoform X1 [Citrus
sinensis]
Length = 438
Score = 213 bits (543), Expect = 1e-52
Identities = 104/157 (66%), Positives = 126/157 (80%), Gaps = 2/157 (1%)
Frame = +2
Query: 2 YLADFKTLWSWYEPYLKDDEEFTPGSSGKMTTMGVYVRDLFLGQYYFDTLLPRIPVPVMR 181
Y AD KTLW+W+E YLKD+EEF+PGS+G++TTMGVYVRDL LGQYYFDTL PRIPVPV+R
Sbjct: 105 YAADPKTLWNWFEQYLKDEEEFSPGSNGRVTTMGVYVRDLLLGQYYFDTLFPRIPVPVLR 164
Query: 182 TAVANLEKMNLPTKPSGSIGDSSR-GSEETSRRPPSVKASLSVSFGQRAPHRASTRDSSP 358
+ NLEKM LP+K SG GD++R GS++T+RRPPSVKA+LSVSFGQRAPHRASTRDSSP
Sbjct: 165 QIIINLEKMKLPSKHSGVTGDTNRYGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSP 224
Query: 359 IRRTIAPPP-YDKDGADDXXXXXXXXXXXXCDLSDRE 466
+RRT+ PPP YD+ ++D + SDRE
Sbjct: 225 VRRTLPPPPMYDRASSEDLRRSPRNRRSSSHEYSDRE 261
Score = 73.9 bits (180), Expect = 1e-10
Identities = 37/63 (58%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Frame = +2
Query: 788 LDQQRTPPRDESKEKKAVSSNLAKLKDLYGDFGNQKENVGDDRAPNRDTSTEEVIRLGG- 964
+D+ +P D +KEK + SSNLAKLKDLYGD +QKE G +R RDT+ EEVIRLGG
Sbjct: 376 IDRDPSPQTDGNKEKTSASSNLAKLKDLYGDVSDQKEVAGPERIARRDTNDEEVIRLGGS 435
Query: 965 SWR 973
SW+
Sbjct: 436 SWK 438